Homology
BLAST of Lsi02G008020 vs. ExPASy Swiss-Prot
Match:
O81787 (Plant-specific TFIIB-related protein PTF2 OS=Arabidopsis thaliana OX=3702 GN=PTF2 PE=1 SV=1)
HSP 1 Score: 462.6 bits (1189), Expect = 5.9e-129
Identity = 249/532 (46.80%), Postives = 350/532 (65.79%), Query Frame = 0
Query: 5 CKNCHSRSLFRDDVSGNLICSSCGIVQEFDNYEAQLCGINGPQGTFVRVGTSGSGSVLNY 64
CK C+ + RD+ +GN C CG ++E+DNYEAQL GI GPQGT++RVGT G GSVL+Y
Sbjct: 3 CKRCNGSNFERDEDTGNSYCGGCGTLREYDNYEAQLGGIRGPQGTYIRVGTIGRGSVLDY 62
Query: 65 KDKKIFEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAYVSMR 124
KDKKI+EA +IE+ T RL +K+ ++ ++S +T+GE+G G+WFPIL+GAC Y +R
Sbjct: 63 KDKKIYEANNLIEETTERLNL-GNKTEVIKSMISKLTDGEFGQGEWFPILIGACCYAVVR 122
Query: 125 KDNR-PLPMSEVASAVECDLHELGRMVIRVVDFLDLKGPEFPVFDIVGSLERAARNSPSF 184
++ + L M EVA V CDLH+LG M+ RVVD LDL E FD+VG + NSP
Sbjct: 123 EEGKGVLSMEEVAYEVGCDLHQLGPMIKRVVDHLDL---ELREFDLVGLFTKTVTNSPRL 182
Query: 185 SSVDADTLERIVKQGIFLLQCAVKWFLTTGRQPLPMVAAVLVLVSKLNEVNVSIDNVAME 244
+ VD D E+I+KQG FL+ CA+KWFL+TGR+P+P+V AVL V ++N V V ID++A +
Sbjct: 183 TDVDRDKKEKIIKQGTFLMNCALKWFLSTGRRPMPLVVAVLAFVVQVNGVKVKIDDLAKD 242
Query: 245 VHAKVSTCKKRYRELLEALVEVGKK--LPWGKDITTKNIVKNAPFVIQYMELKSM-SNAS 304
++TCK RY+EL E LV+V ++ LPW KD+T KN++K++ + ME KSM
Sbjct: 243 ASVSLTTCKTRYKELSEKLVKVAEEVGLPWAKDVTVKNVLKHSGTLFALMEAKSMKKRKQ 302
Query: 305 GKGKDLENV-GIDLQSAVSECLRKELDYESEVNNLEDD-SQYFELQGSSWHDESSCDNGN 364
G GK+L G ++ V +CL KE Y + + +D S+YF+++G S C+ +
Sbjct: 303 GTGKELVRTDGFCVEDLVMDCLSKESMYCYDDDARQDTMSRYFDVEGE--RQLSLCNYDD 362
Query: 365 KLNISHECLSLIYHKFLDEMA----HLRLSGGIKEVYGRKQGRKAGVYSSTEWWEGKSEL 424
NIS LS Y++F D + R G + ++ R+ G+ S+ WW+GKSEL
Sbjct: 363 --NISENQLSTKYNEFEDRVCGGTLAKRSQGSSQSMWQRRS--VFGMVSTENWWKGKSEL 422
Query: 425 SKKLLLQQLLETDIGSQGIPPSFVSSCNAYKRRKEKVNAAKKRIERIMHPS-SAPTGDVN 484
SK+LLL+ LLE D+G + +PPS++ C A +RR+EK+ AAK RI I HPS + G ++
Sbjct: 423 SKRLLLKDLLEKDVGLEALPPSYIKGCVAVERRREKIKAAKLRINAIQHPSDNVSEGALS 482
Query: 485 TE---KKRKRKGANGIEWEDIIIETLLLHGVKEEEIEKGHYNVLLDLHVFNS 523
E K+KRK + I+WED++I+TL+LH V EEEIEKGHY LLDLHVFNS
Sbjct: 483 LELEHSKKKRKKGSEIDWEDLVIQTLVLHNVNEEEIEKGHYKTLLDLHVFNS 524
BLAST of Lsi02G008020 vs. ExPASy Swiss-Prot
Match:
Q4R318 (Transcription factor IIIB 50 kDa subunit OS=Macaca fascicularis OX=9541 GN=BRF2 PE=2 SV=1)
HSP 1 Score: 66.2 bits (160), Expect = 1.2e-09
Identity = 65/309 (21.04%), Postives = 133/309 (43.04%), Query Frame = 0
Query: 3 GSCKNCHSRSLFRDD--VSGNLICSSCG-IVQE-------FDNYEAQLCGINGPQGTFVR 62
G C +C S L D L+CS CG +V E D + + G +
Sbjct: 5 GRCPDCGSTELVEDSHYSQSQLVCSDCGCVVTEGVLTTTFSDEGNLREVTYSRSTGENEQ 64
Query: 63 VGTSGSGSVLNYKDK-KIFEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWF 122
+ S + +D ++ + ED A + + +R + + + E
Sbjct: 65 ISRSQQRGLRRVRDLCRVLQLPPTFEDTAVAYYQQAYRHSGIR--AARLQKKE------- 124
Query: 123 PILVGACAYVSMRKDNRPLPMSEVASAVECDLHELGRMVIRVVDFLDLKGPEFPVFDIVG 182
+LVG C ++ R+ N PL M + + + DL + +++V L L P + ++V
Sbjct: 125 -VLVGCCVLITCRQHNWPLTMGAICTLLYADLDVFSSIYMQIVKLLGLDMPSLCLAELVK 184
Query: 183 ---SLERAARNSPSFSSVDADTLERIVKQGIFLLQCAVKWFLTTGRQPLPMVAAVLVL-- 242
S + + SPS + + E+++ + + L++ A + +L TGR PLP++ A L
Sbjct: 185 TYCSSFKLFQASPSVPAKYVEDKEKMLSRTLQLVELANETWLVTGRHPLPVITAATFLAW 244
Query: 243 --VSKLNEVNVSIDNVAMEVHAKVS-TCKKRYRELLEALVEVGKKLPWGK--DITTKNIV 291
+ + ++ S+ + + R +ELL L+ + ++L W + + +++V
Sbjct: 245 QSLQPADRLSCSLARFCKLANVDLPYPASSRLQELLAVLLRMAEQLAWLRVLRLDKRSVV 303
BLAST of Lsi02G008020 vs. ExPASy Swiss-Prot
Match:
Q9HAW0 (Transcription factor IIIB 50 kDa subunit OS=Homo sapiens OX=9606 GN=BRF2 PE=1 SV=1)
HSP 1 Score: 65.9 bits (159), Expect = 1.6e-09
Identity = 66/311 (21.22%), Postives = 133/311 (42.77%), Query Frame = 0
Query: 3 GSCKNCHSRSLFRDD--VSGNLICSSCG-IVQE-------FDNYEAQLCGINGPQGTFVR 62
G C +C S L D L+CS CG +V E D + + G +
Sbjct: 5 GRCPDCGSTELVEDSHYSQSQLVCSDCGCVVTEGVLTTTFSDEGNLREVTYSRSTGENEQ 64
Query: 63 VGTSGSGSVLNYKDK-KIFEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWF 122
V S + +D ++ + ED A + + +R + + + E
Sbjct: 65 VSRSQQRGLRRVRDLCRVLQLPPTFEDTAVAYYQQAYRHSGIR--AARLQKKE------- 124
Query: 123 PILVGACAYVSMRKDNRPLPMSEVASAVECDLHELGRMVIRVVDFLDLKGPEFPVFDIVG 182
+LVG C ++ R+ N PL M + + + DL +++V L L P + ++V
Sbjct: 125 -VLVGCCVLITCRQHNWPLTMGAICTLLYADLDVFSSTYMQIVKLLGLDVPSLCLAELVK 184
Query: 183 ---SLERAARNSPSFSSVDADTLERIVKQGIFLLQCAVKWFLTTGRQPLPMVAAVLVL-- 242
S + + SPS + + E+++ + + L++ A + +L TGR PLP++ A L
Sbjct: 185 TYCSSFKLFQASPSVPAKYVEDKEKMLSRTMQLVELANETWLVTGRHPLPVITAATFLAW 244
Query: 243 --VSKLNEVNVSIDNVAMEVHAKVS-TCKKRYRELLEALVEVGKKLPWGK--DITTKNIV 293
+ + ++ S+ + + R +ELL L+ + ++L W + + +++V
Sbjct: 245 QSLQPADRLSCSLARFCKLANVDLPYPASSRLQELLAVLLRMAEQLAWLRVLRLDKRSVV 304
BLAST of Lsi02G008020 vs. ExPASy Swiss-Prot
Match:
Q3UAW9 (Transcription factor IIIB 50 kDa subunit OS=Mus musculus OX=10090 GN=Brf2 PE=1 SV=1)
HSP 1 Score: 63.9 bits (154), Expect = 6.1e-09
Identity = 66/307 (21.50%), Postives = 128/307 (41.69%), Query Frame = 0
Query: 5 CKNCHSRSLFRDD--VSGNLICSSCGIVQEFDNYEAQLCGINGPQGTFVRV----GTSGS 64
C +C S L D L+CS CG V E L +G F V T +
Sbjct: 7 CPDCGSSELVEDSHYSQSQLVCSDCGCVVT----EGVLTTTFSDEGNFREVTYSRSTGEN 66
Query: 65 GSVLNYKDKKIFEAQKIIEDITFRLGF--SASKSNDVRILVSTITEGEYGLGDWFPILVG 124
V + + + + + + L F +A +S I + +LVG
Sbjct: 67 EQVSRCQQRDLRRVRDLCRILKLPLTFEDTAISYYQKAYQLSGIRAARLQKKE---VLVG 126
Query: 125 ACAYVSMRKDNRPLPMSEVASAVECDLHELGRMVIRVVDFLDLKGPEFPVFDIVGSL--- 184
C ++ R+ N PL M + + + DL +++V L L P + D+V S
Sbjct: 127 CCVLITCRQHNWPLTMGTICTLLYADLDLFSGTYMQMVKLLGLDVPSLCLADLVKSYCSS 186
Query: 185 ERAARNSPSFSSVDADTLERIVKQGIFLLQCAVKWFLTTGRQPLPMVAAVLVL----VSK 244
+ + SPS + + ++++ + + L++ A + +L TGR PLP++ A L +
Sbjct: 187 FKLFQASPSVPAKYVEDKDKMLSRTLLLVELADETWLVTGRHPLPIITAATFLAWQSLRP 246
Query: 245 LNEVNVSIDNVAMEVHAKVS-TCKKRYRELLEALVEVGKKLPWGK--DITTKNIVKNAPF 294
+ + S+ + + R +ELL L+++ +L W + + +++VK+
Sbjct: 247 SDRLTCSLAQFCKLANVDLPYPAASRLQELLAVLLQMAGQLAWLQVLKLNKRSVVKHIGD 306
BLAST of Lsi02G008020 vs. ExPASy Swiss-Prot
Match:
Q29S07 (Transcription factor IIIB 50 kDa subunit OS=Bos taurus OX=9913 GN=BRF2 PE=2 SV=1)
HSP 1 Score: 62.8 bits (151), Expect = 1.3e-08
Identity = 66/312 (21.15%), Postives = 129/312 (41.35%), Query Frame = 0
Query: 3 GSCKNCHSRSLFRDD--VSGNLICSSCG-IVQE-------FDNYEAQLCGINGPQGTFVR 62
G C +C S L D L+CS CG +V E D + + G +
Sbjct: 5 GRCPDCGSAELVEDSHYSQNQLVCSDCGCVVTEGVLTTTFSDEGNLREVTYSRSTGENEQ 64
Query: 63 VGTSGSGSVLNYKDK-KIFEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWF 122
V S + +D ++ + ED A + +R + + + E
Sbjct: 65 VSRSQQRGLRRVRDLCRVLQLPPTFEDTAVAYYQQAHQLAGIR--TARLQKKE------- 124
Query: 123 PILVGACAYVSMRKDNRPLPMSEVASAVECDLHELGRMVIRVVDFLDLKGPEFPVFDIVG 182
+L G C ++ R+ N PL M + + + DL +++V L L P + D+V
Sbjct: 125 -VLAGCCVLITCRQRNWPLTMGTICTLLYADLDVFSGTYMQIVKLLGLDVPSLCLVDLVK 184
Query: 183 ---SLERAARNSPSFSSVDADTLERIVKQGIFLLQCAVKWFLTTGRQPLPMVAAVLVL-- 242
S + SPS + + E+++ + + L++ A + +L TGR PLP++ A L
Sbjct: 185 TYCSSFKLFEASPSVPAKYVEDKEKMLSRTLQLVELADETWLVTGRHPLPVITAATFLAW 244
Query: 243 --VSKLNEVNVSIDNVAMEVHAKVS-TCKKRYRELLEALVEVGKKLPWGK--DITTKNIV 294
+ + + S+ + + R +ELL L+ + ++L W + + +++V
Sbjct: 245 QSLRPSDRLTCSLARFCKLANVDLPYPASSRLQELLAVLLRMAEQLAWLQVLKLDKRSVV 304
BLAST of Lsi02G008020 vs. ExPASy TrEMBL
Match:
A0A5A7UMA0 (Transcription factor IIIB 50 kDa subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002190 PE=4 SV=1)
HSP 1 Score: 964.1 bits (2491), Expect = 2.3e-277
Identity = 480/522 (91.95%), Postives = 505/522 (96.74%), Query Frame = 0
Query: 1 MSGSCKNCHSRSLFRDDVSGNLICSSCGIVQEFDNYEAQLCGINGPQGTFVRVGTSGSGS 60
MSGSCK+C+SRS+FRDDVSGNLICSSCGIVQEF+NYEAQL GINGPQGTFVRVGTSGSGS
Sbjct: 1 MSGSCKDCNSRSIFRDDVSGNLICSSCGIVQEFENYEAQLGGINGPQGTFVRVGTSGSGS 60
Query: 61 VLNYKDKKIFEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY 120
VLNYKDKK++EAQK+IEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY
Sbjct: 61 VLNYKDKKVYEAQKVIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY 120
Query: 121 VSMRKDNRPLPMSEVASAVECDLHELGRMVIRVVDFLDLKGPEFPVFDIVGSLERAARNS 180
VSMRKDNRPL MSEVASAVECDLHELGRMV+RVVDFLDL+G EFPVFDIVGSLERAARNS
Sbjct: 121 VSMRKDNRPLSMSEVASAVECDLHELGRMVMRVVDFLDLRGSEFPVFDIVGSLERAARNS 180
Query: 181 PSFSSVDADTLERIVKQGIFLLQCAVKWFLTTGRQPLPMVAAVLVLVSKLNEVNVSIDNV 240
PSFS ++AD LERIVKQGIFLLQCA+KWFLTTGRQPLPMVAAVLVLVSKLNEV+VS++NV
Sbjct: 181 PSFSRLEADILERIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSKLNEVDVSMENV 240
Query: 241 AMEVHAKVSTCKKRYRELLEALVEVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSNAS 300
AMEVHAKVSTCKKRYRELLEALVEVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSNAS
Sbjct: 241 AMEVHAKVSTCKKRYRELLEALVEVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSNAS 300
Query: 301 GKGKDLENVGIDLQSAVSECLRKELDYESEVNNLEDDSQYFELQGSSWHDESSCDNGNKL 360
GKGKDLENVGIDLQSAVSECLRKEL+YESEVNNLEDDSQYFELQGS W DES+CDNGN+L
Sbjct: 301 GKGKDLENVGIDLQSAVSECLRKELEYESEVNNLEDDSQYFELQGSRWCDESNCDNGNRL 360
Query: 361 NISHECLSLIYHKFLDEMAHLRLSGGIKEVYGRKQGRKAGVYSSTEWWEGKSELSKKLLL 420
NISHECLSLIY+KFLDEMA LR SGGI +VYGRKQGRKAG YSSTEWWEGKS LSKKLLL
Sbjct: 361 NISHECLSLIYNKFLDEMAELRSSGGINDVYGRKQGRKAGFYSSTEWWEGKSVLSKKLLL 420
Query: 421 QQLLETDIGSQGIPPSFVSSCNAYKRRKEKVNAAKKRIERIMHPSSAPTGDVNTEKKRKR 480
QQLLETDIGSQGIPPSFVSSCNAYKRRKEKVNAAKKRI+RIMHPS+AP GDVN +KKRKR
Sbjct: 421 QQLLETDIGSQGIPPSFVSSCNAYKRRKEKVNAAKKRIQRIMHPSNAPAGDVNIKKKRKR 480
Query: 481 KGANGIEWEDIIIETLLLHGVKEEEIEKGHYNVLLDLHVFNS 523
KGA+ IEWEDIIIETLLLHGV+EEEIEKGHY VLLDLHVF S
Sbjct: 481 KGADVIEWEDIIIETLLLHGVQEEEIEKGHYKVLLDLHVFTS 522
BLAST of Lsi02G008020 vs. ExPASy TrEMBL
Match:
A0A1S3B6X4 (transcription factor IIIB 50 kDa subunit OS=Cucumis melo OX=3656 GN=LOC103486826 PE=4 SV=1)
HSP 1 Score: 964.1 bits (2491), Expect = 2.3e-277
Identity = 480/522 (91.95%), Postives = 505/522 (96.74%), Query Frame = 0
Query: 1 MSGSCKNCHSRSLFRDDVSGNLICSSCGIVQEFDNYEAQLCGINGPQGTFVRVGTSGSGS 60
MSGSCK+C+SRS+FRDDVSGNLICSSCGIVQEF+NYEAQL GINGPQGTFVRVGTSGSGS
Sbjct: 1 MSGSCKDCNSRSIFRDDVSGNLICSSCGIVQEFENYEAQLGGINGPQGTFVRVGTSGSGS 60
Query: 61 VLNYKDKKIFEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY 120
VLNYKDKK++EAQK+IEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY
Sbjct: 61 VLNYKDKKVYEAQKVIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY 120
Query: 121 VSMRKDNRPLPMSEVASAVECDLHELGRMVIRVVDFLDLKGPEFPVFDIVGSLERAARNS 180
VSMRKDNRPL MSEVASAVECDLHELGRMV+RVVDFLDL+G EFPVFDIVGSLERAARNS
Sbjct: 121 VSMRKDNRPLSMSEVASAVECDLHELGRMVMRVVDFLDLRGSEFPVFDIVGSLERAARNS 180
Query: 181 PSFSSVDADTLERIVKQGIFLLQCAVKWFLTTGRQPLPMVAAVLVLVSKLNEVNVSIDNV 240
PSFS ++AD LERIVKQGIFLLQCA+KWFLTTGRQPLPMVAAVLVLVSKLNEV+VS++NV
Sbjct: 181 PSFSRLEADILERIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSKLNEVDVSMENV 240
Query: 241 AMEVHAKVSTCKKRYRELLEALVEVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSNAS 300
AMEVHAKVSTCKKRYRELLEALVEVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSNAS
Sbjct: 241 AMEVHAKVSTCKKRYRELLEALVEVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSNAS 300
Query: 301 GKGKDLENVGIDLQSAVSECLRKELDYESEVNNLEDDSQYFELQGSSWHDESSCDNGNKL 360
GKGKDLENVGIDLQSAVSECLRKEL+YESEVNNLEDDSQYFELQGS W DES+CDNGN+L
Sbjct: 301 GKGKDLENVGIDLQSAVSECLRKELEYESEVNNLEDDSQYFELQGSRWCDESNCDNGNRL 360
Query: 361 NISHECLSLIYHKFLDEMAHLRLSGGIKEVYGRKQGRKAGVYSSTEWWEGKSELSKKLLL 420
NISHECLSLIY+KFLDEMA LR SGGI +VYGRKQGRKAG YSSTEWWEGKS LSKKLLL
Sbjct: 361 NISHECLSLIYNKFLDEMAELRSSGGINDVYGRKQGRKAGFYSSTEWWEGKSVLSKKLLL 420
Query: 421 QQLLETDIGSQGIPPSFVSSCNAYKRRKEKVNAAKKRIERIMHPSSAPTGDVNTEKKRKR 480
QQLLETDIGSQGIPPSFVSSCNAYKRRKEKVNAAKKRI+RIMHPS+AP GDVN +KKRKR
Sbjct: 421 QQLLETDIGSQGIPPSFVSSCNAYKRRKEKVNAAKKRIQRIMHPSNAPAGDVNIKKKRKR 480
Query: 481 KGANGIEWEDIIIETLLLHGVKEEEIEKGHYNVLLDLHVFNS 523
KGA+ IEWEDIIIETLLLHGV+EEEIEKGHY VLLDLHVF S
Sbjct: 481 KGADVIEWEDIIIETLLLHGVQEEEIEKGHYKVLLDLHVFTS 522
BLAST of Lsi02G008020 vs. ExPASy TrEMBL
Match:
A0A0A0M0A0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G477510 PE=4 SV=1)
HSP 1 Score: 939.9 bits (2428), Expect = 4.6e-270
Identity = 471/522 (90.23%), Postives = 495/522 (94.83%), Query Frame = 0
Query: 1 MSGSCKNCHSRSLFRDDVSGNLICSSCGIVQEFDNYEAQLCGINGPQGTFVRVGTSGSGS 60
MSGSCKNCHSRS+FRDDVSGN ICSSCGIVQEFDNY+AQL GINGPQGTFVRVGTSGSGS
Sbjct: 1 MSGSCKNCHSRSIFRDDVSGNQICSSCGIVQEFDNYDAQLGGINGPQGTFVRVGTSGSGS 60
Query: 61 VLNYKDKKIFEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY 120
VLNYKDKKI+EAQK+IEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY
Sbjct: 61 VLNYKDKKIYEAQKVIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY 120
Query: 121 VSMRKDNRPLPMSEVASAVECDLHELGRMVIRVVDFLDLKGPEFPVFDIVGSLERAARNS 180
VSMRKD+RPL MSEVASAVECDLHELGRMV+RVV+FLDL+G EFPVFDIVGSLERAARNS
Sbjct: 121 VSMRKDSRPLSMSEVASAVECDLHELGRMVMRVVEFLDLRGSEFPVFDIVGSLERAARNS 180
Query: 181 PSFSSVDADTLERIVKQGIFLLQCAVKWFLTTGRQPLPMVAAVLVLVSKLNEVNVSIDNV 240
PSFS ++AD LERIVKQGIFLLQCA+KWFLTTGRQPLPMVAAVLVLVSKLNEV+VSI+NV
Sbjct: 181 PSFSRLEADILERIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSKLNEVDVSIENV 240
Query: 241 AMEVHAKVSTCKKRYRELLEALVEVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSNAS 300
MEVHA VSTCKKRYRELLEALVEVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMS AS
Sbjct: 241 GMEVHANVSTCKKRYRELLEALVEVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSKAS 300
Query: 301 GKGKDLENVGIDLQSAVSECLRKELDYESEVNNLEDDSQYFELQGSSWHDESSCDNGNKL 360
GKGKDLENV IDLQSAVSECLRKEL+YESEV NLEDDSQYFELQ S W DES+ DNGN+L
Sbjct: 301 GKGKDLENVEIDLQSAVSECLRKELEYESEVYNLEDDSQYFELQRSRWQDESNRDNGNRL 360
Query: 361 NISHECLSLIYHKFLDEMAHLRLSGGIKEVYGRKQGRKAGVYSSTEWWEGKSELSKKLLL 420
NISHECLSLIY+KFLDEMA LR SGGI EVYG KQGRK G YSSTEWWEGKSELSKKLLL
Sbjct: 361 NISHECLSLIYNKFLDEMAELRSSGGINEVYGTKQGRKTGFYSSTEWWEGKSELSKKLLL 420
Query: 421 QQLLETDIGSQGIPPSFVSSCNAYKRRKEKVNAAKKRIERIMHPSSAPTGDVNTEKKRKR 480
QQLLETDIGSQGIPPSFVSSCNAY+RRKEKVNAAKKRI+RIMHPS+AP DVN +KKRKR
Sbjct: 421 QQLLETDIGSQGIPPSFVSSCNAYERRKEKVNAAKKRIQRIMHPSTAPADDVNIKKKRKR 480
Query: 481 KGANGIEWEDIIIETLLLHGVKEEEIEKGHYNVLLDLHVFNS 523
KGA+ IEWEDIIIETLLLHGV+EEEIEKGHY VLLDL+VF S
Sbjct: 481 KGADVIEWEDIIIETLLLHGVQEEEIEKGHYKVLLDLYVFTS 522
BLAST of Lsi02G008020 vs. ExPASy TrEMBL
Match:
A0A6J1JZD6 (plant-specific TFIIB-related protein PTF2 OS=Cucurbita maxima OX=3661 GN=LOC111490217 PE=4 SV=1)
HSP 1 Score: 914.4 bits (2362), Expect = 2.1e-262
Identity = 457/522 (87.55%), Postives = 483/522 (92.53%), Query Frame = 0
Query: 1 MSGSCKNCHSRSLFRDDVSGNLICSSCGIVQEFDNYEAQLCGINGPQGTFVRVGTSGSGS 60
MSGSCKNC RSLFRDDVSGNLICSSCGIVQEFDNY+AQL G+NGPQGTFVRVGTSGSGS
Sbjct: 1 MSGSCKNCSGRSLFRDDVSGNLICSSCGIVQEFDNYDAQLGGLNGPQGTFVRVGTSGSGS 60
Query: 61 VLNYKDKKIFEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY 120
VLNYKDKKI+EAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYG GDWF ILVGAC+Y
Sbjct: 61 VLNYKDKKIYEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGQGDWFSILVGACSY 120
Query: 121 VSMRKDNRPLPMSEVASAVECDLHELGRMVIRVVDFLDLKGPEFPVFDIVGSLERAARNS 180
VSMRKDNRPLPMSEVAS +ECDLHELGRMV+RVVDFLDLKGP FP FDIVGSLERAARNS
Sbjct: 121 VSMRKDNRPLPMSEVASTIECDLHELGRMVLRVVDFLDLKGPAFPGFDIVGSLERAARNS 180
Query: 181 PSFSSVDADTLERIVKQGIFLLQCAVKWFLTTGRQPLPMVAAVLVLVSKLNEVNVSIDNV 240
PSFS V+ADTL+ IVKQGIFLLQCA+KWFLTTGRQPLPMVAAVLVLVS LNEVNVSID+V
Sbjct: 181 PSFSKVEADTLDIIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSGLNEVNVSIDDV 240
Query: 241 AMEVHAKVSTCKKRYRELLEALVEVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSNAS 300
AMEVHAKVSTCKKRYRELL ALVEVGKKLPWGKDIT +NIVKNAPFVIQYMELKSMSN
Sbjct: 241 AMEVHAKVSTCKKRYRELLGALVEVGKKLPWGKDITKRNIVKNAPFVIQYMELKSMSNTC 300
Query: 301 GKGKDLENVGIDLQSAVSECLRKELDYESEVNNLEDDSQYFELQGSSWHDESSCDNGNKL 360
G+GK+ E+VGIDLQ+AVSECLRKEL YESEVNNLEDDSQYFEL G+SWHDESSCD+ NKL
Sbjct: 301 GQGKNFEDVGIDLQAAVSECLRKELQYESEVNNLEDDSQYFELIGNSWHDESSCDDRNKL 360
Query: 361 NISHECLSLIYHKFLDEMAHLRLSGGIKEVYGRKQGRKAGVYSSTEWWEGKSELSKKLLL 420
NISHECLSLIY KFLDEMAHLR SG I E+YGRK GRKAG SSTEWWEGKS+LSKKLLL
Sbjct: 361 NISHECLSLIYTKFLDEMAHLRSSGEINEIYGRKLGRKAGFQSSTEWWEGKSQLSKKLLL 420
Query: 421 QQLLETDIGSQGIPPSFVSSCNAYKRRKEKVNAAKKRIERIMHPSSAPTGDVNTEKKRKR 480
QLLETD+G G+PPSFV+SCNAYKRRKEK+NAAK RI+RIM PS A GDVN EK+RKR
Sbjct: 421 HQLLETDVGLNGMPPSFVTSCNAYKRRKEKINAAKNRIQRIMLPSHAAIGDVNAEKERKR 480
Query: 481 KGANGIEWEDIIIETLLLHGVKEEEIEKGHYNVLLDLHVFNS 523
K A GIEWEDIIIETLLLH VKEEEIEKGHYN LLDLHVF+S
Sbjct: 481 KRAVGIEWEDIIIETLLLHDVKEEEIEKGHYNALLDLHVFSS 522
BLAST of Lsi02G008020 vs. ExPASy TrEMBL
Match:
A0A6J1GSR8 (plant-specific TFIIB-related protein PTF2 OS=Cucurbita moschata OX=3662 GN=LOC111457096 PE=4 SV=1)
HSP 1 Score: 910.2 bits (2351), Expect = 3.9e-261
Identity = 454/522 (86.97%), Postives = 482/522 (92.34%), Query Frame = 0
Query: 1 MSGSCKNCHSRSLFRDDVSGNLICSSCGIVQEFDNYEAQLCGINGPQGTFVRVGTSGSGS 60
MSGSCKNC RSLFRDDVSGNLICSSCGIVQEFDNY+AQL G+NGPQGTFVRVGTSGSGS
Sbjct: 1 MSGSCKNCSGRSLFRDDVSGNLICSSCGIVQEFDNYDAQLGGLNGPQGTFVRVGTSGSGS 60
Query: 61 VLNYKDKKIFEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY 120
VLNYKDKKI+EAQ IIEDITFRLGFSASKSNDVRILVSTITEGEYG GDWF ILVGAC+Y
Sbjct: 61 VLNYKDKKIYEAQNIIEDITFRLGFSASKSNDVRILVSTITEGEYGQGDWFSILVGACSY 120
Query: 121 VSMRKDNRPLPMSEVASAVECDLHELGRMVIRVVDFLDLKGPEFPVFDIVGSLERAARNS 180
VSMRKDNRPLPMSEVAS +ECDLHELGRMV+RVVDFLDLKGP FP FDIVGSLERAARNS
Sbjct: 121 VSMRKDNRPLPMSEVASTIECDLHELGRMVLRVVDFLDLKGPAFPGFDIVGSLERAARNS 180
Query: 181 PSFSSVDADTLERIVKQGIFLLQCAVKWFLTTGRQPLPMVAAVLVLVSKLNEVNVSIDNV 240
PSFS V+ADTL+ IVKQGIFLLQCA+KWFLTTGRQPLPMVAAVLVLVS LNEVNVSID+V
Sbjct: 181 PSFSKVEADTLDVIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSGLNEVNVSIDDV 240
Query: 241 AMEVHAKVSTCKKRYRELLEALVEVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSNAS 300
AMEVHAKVSTCKKRYRELL ALVEVGKKLPWGKDIT +NIVKNAPFVIQYMELKSMSN
Sbjct: 241 AMEVHAKVSTCKKRYRELLGALVEVGKKLPWGKDITKRNIVKNAPFVIQYMELKSMSNTC 300
Query: 301 GKGKDLENVGIDLQSAVSECLRKELDYESEVNNLEDDSQYFELQGSSWHDESSCDNGNKL 360
G+GK+ E+VGIDLQ+AVSECLRKEL YESEVNNLEDDSQYFEL G+SW DESSCD+ NKL
Sbjct: 301 GRGKNFEDVGIDLQAAVSECLRKELQYESEVNNLEDDSQYFELIGNSWRDESSCDDRNKL 360
Query: 361 NISHECLSLIYHKFLDEMAHLRLSGGIKEVYGRKQGRKAGVYSSTEWWEGKSELSKKLLL 420
NISHECLSLIY KFLDEMAHLR SGGI E+YGRK GRKAG SSTEWWEGKS+LSKKLLL
Sbjct: 361 NISHECLSLIYTKFLDEMAHLRSSGGINEIYGRKLGRKAGFQSSTEWWEGKSQLSKKLLL 420
Query: 421 QQLLETDIGSQGIPPSFVSSCNAYKRRKEKVNAAKKRIERIMHPSSAPTGDVNTEKKRKR 480
QLLETD+G G+PPSFV+SCNAYKRRKEK+NAAK RI+RIM PS+ G+VN EK+RKR
Sbjct: 421 HQLLETDVGLNGMPPSFVTSCNAYKRRKEKINAAKNRIQRIMLPSNTAIGNVNAEKERKR 480
Query: 481 KGANGIEWEDIIIETLLLHGVKEEEIEKGHYNVLLDLHVFNS 523
K A GIEWEDIIIETLLLH VKEEEIEKGHYN LLDLHVF+S
Sbjct: 481 KRAIGIEWEDIIIETLLLHDVKEEEIEKGHYNALLDLHVFSS 522
BLAST of Lsi02G008020 vs. NCBI nr
Match:
XP_038893651.1 (plant-specific TFIIB-related protein PTF2 [Benincasa hispida])
HSP 1 Score: 991.9 bits (2563), Expect = 2.1e-285
Identity = 495/521 (95.01%), Postives = 505/521 (96.93%), Query Frame = 0
Query: 1 MSGSCKNCHSRSLFRDDVSGNLICSSCGIVQEFDNYEAQLCGINGPQGTFVRVGTSGSGS 60
MSGSCKNCHSRSLFRDDVSGNLICSSCGIVQEFDNYEAQL GINGP GTFVRVGTSGSGS
Sbjct: 1 MSGSCKNCHSRSLFRDDVSGNLICSSCGIVQEFDNYEAQLSGINGPLGTFVRVGTSGSGS 60
Query: 61 VLNYKDKKIFEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY 120
VLNYKDKKIFEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY
Sbjct: 61 VLNYKDKKIFEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY 120
Query: 121 VSMRKDNRPLPMSEVASAVECDLHELGRMVIRVVDFLDLKGPEFPVFDIVGSLERAARNS 180
VSMRKDNRPLPMSEVASAVECDLHELGRMVIRVVDFLDLKGPEFPVFDIVGSLERA RNS
Sbjct: 121 VSMRKDNRPLPMSEVASAVECDLHELGRMVIRVVDFLDLKGPEFPVFDIVGSLERATRNS 180
Query: 181 PSFSSVDADTLERIVKQGIFLLQCAVKWFLTTGRQPLPMVAAVLVLVSKLNEVNVSIDNV 240
PSFS VDAD LERIVKQGIFLLQCA+KWFLTTGRQPLPMVAAVLVLVSKLNEV+VSIDNV
Sbjct: 181 PSFSRVDADILERIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSKLNEVDVSIDNV 240
Query: 241 AMEVHAKVSTCKKRYRELLEALVEVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSNAS 300
AMEVHAKVSTCKKRYRELLEALV+VGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSNAS
Sbjct: 241 AMEVHAKVSTCKKRYRELLEALVKVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSNAS 300
Query: 301 GKGKDLENVGIDLQSAVSECLRKELDYESEVNNLEDDSQYFELQGSSWHDESSCDNGNKL 360
GKGKDLENVG+DLQSAVSECLRKEL+YESEVNNLEDDSQYFELQGSSW DESSCDNGN+L
Sbjct: 301 GKGKDLENVGVDLQSAVSECLRKELEYESEVNNLEDDSQYFELQGSSWRDESSCDNGNRL 360
Query: 361 NISHECLSLIYHKFLDEMAHLRLSGGIKEVYGRKQGRKAGVYSSTEWWEGKSELSKKLLL 420
NISHECLSLIYHKFLDEMAHL+ SGGI EVYGRKQGRKAG YSSTEWWEGKSELSKKLLL
Sbjct: 361 NISHECLSLIYHKFLDEMAHLKSSGGINEVYGRKQGRKAGFYSSTEWWEGKSELSKKLLL 420
Query: 421 QQLLETDIGSQGIPPSFVSSCNAYKRRKEKVNAAKKRIERIMHPSSAPTGDVNTEKKRKR 480
QQLLE DIGSQGIPPSFVSSCNAYKRRKEK+ AAKKRI+RIM PS+AP GDVN EKKRKR
Sbjct: 421 QQLLEIDIGSQGIPPSFVSSCNAYKRRKEKIIAAKKRIQRIMLPSNAPIGDVNIEKKRKR 480
Query: 481 KGANGIEWEDIIIETLLLHGVKEEEIEKGHYNVLLDLHVFN 522
KG NGIEWEDIIIETLLLHGVKEEEIEKGHYN LLDLHVFN
Sbjct: 481 KGTNGIEWEDIIIETLLLHGVKEEEIEKGHYNALLDLHVFN 521
BLAST of Lsi02G008020 vs. NCBI nr
Match:
XP_008443157.1 (PREDICTED: transcription factor IIIB 50 kDa subunit [Cucumis melo] >KAA0057033.1 transcription factor IIIB 50 kDa subunit [Cucumis melo var. makuwa])
HSP 1 Score: 964.1 bits (2491), Expect = 4.7e-277
Identity = 480/522 (91.95%), Postives = 505/522 (96.74%), Query Frame = 0
Query: 1 MSGSCKNCHSRSLFRDDVSGNLICSSCGIVQEFDNYEAQLCGINGPQGTFVRVGTSGSGS 60
MSGSCK+C+SRS+FRDDVSGNLICSSCGIVQEF+NYEAQL GINGPQGTFVRVGTSGSGS
Sbjct: 1 MSGSCKDCNSRSIFRDDVSGNLICSSCGIVQEFENYEAQLGGINGPQGTFVRVGTSGSGS 60
Query: 61 VLNYKDKKIFEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY 120
VLNYKDKK++EAQK+IEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY
Sbjct: 61 VLNYKDKKVYEAQKVIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY 120
Query: 121 VSMRKDNRPLPMSEVASAVECDLHELGRMVIRVVDFLDLKGPEFPVFDIVGSLERAARNS 180
VSMRKDNRPL MSEVASAVECDLHELGRMV+RVVDFLDL+G EFPVFDIVGSLERAARNS
Sbjct: 121 VSMRKDNRPLSMSEVASAVECDLHELGRMVMRVVDFLDLRGSEFPVFDIVGSLERAARNS 180
Query: 181 PSFSSVDADTLERIVKQGIFLLQCAVKWFLTTGRQPLPMVAAVLVLVSKLNEVNVSIDNV 240
PSFS ++AD LERIVKQGIFLLQCA+KWFLTTGRQPLPMVAAVLVLVSKLNEV+VS++NV
Sbjct: 181 PSFSRLEADILERIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSKLNEVDVSMENV 240
Query: 241 AMEVHAKVSTCKKRYRELLEALVEVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSNAS 300
AMEVHAKVSTCKKRYRELLEALVEVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSNAS
Sbjct: 241 AMEVHAKVSTCKKRYRELLEALVEVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSNAS 300
Query: 301 GKGKDLENVGIDLQSAVSECLRKELDYESEVNNLEDDSQYFELQGSSWHDESSCDNGNKL 360
GKGKDLENVGIDLQSAVSECLRKEL+YESEVNNLEDDSQYFELQGS W DES+CDNGN+L
Sbjct: 301 GKGKDLENVGIDLQSAVSECLRKELEYESEVNNLEDDSQYFELQGSRWCDESNCDNGNRL 360
Query: 361 NISHECLSLIYHKFLDEMAHLRLSGGIKEVYGRKQGRKAGVYSSTEWWEGKSELSKKLLL 420
NISHECLSLIY+KFLDEMA LR SGGI +VYGRKQGRKAG YSSTEWWEGKS LSKKLLL
Sbjct: 361 NISHECLSLIYNKFLDEMAELRSSGGINDVYGRKQGRKAGFYSSTEWWEGKSVLSKKLLL 420
Query: 421 QQLLETDIGSQGIPPSFVSSCNAYKRRKEKVNAAKKRIERIMHPSSAPTGDVNTEKKRKR 480
QQLLETDIGSQGIPPSFVSSCNAYKRRKEKVNAAKKRI+RIMHPS+AP GDVN +KKRKR
Sbjct: 421 QQLLETDIGSQGIPPSFVSSCNAYKRRKEKVNAAKKRIQRIMHPSNAPAGDVNIKKKRKR 480
Query: 481 KGANGIEWEDIIIETLLLHGVKEEEIEKGHYNVLLDLHVFNS 523
KGA+ IEWEDIIIETLLLHGV+EEEIEKGHY VLLDLHVF S
Sbjct: 481 KGADVIEWEDIIIETLLLHGVQEEEIEKGHYKVLLDLHVFTS 522
BLAST of Lsi02G008020 vs. NCBI nr
Match:
XP_004149065.1 (plant-specific TFIIB-related protein PTF2 [Cucumis sativus] >KGN65641.1 hypothetical protein Csa_019679 [Cucumis sativus])
HSP 1 Score: 939.9 bits (2428), Expect = 9.5e-270
Identity = 471/522 (90.23%), Postives = 495/522 (94.83%), Query Frame = 0
Query: 1 MSGSCKNCHSRSLFRDDVSGNLICSSCGIVQEFDNYEAQLCGINGPQGTFVRVGTSGSGS 60
MSGSCKNCHSRS+FRDDVSGN ICSSCGIVQEFDNY+AQL GINGPQGTFVRVGTSGSGS
Sbjct: 1 MSGSCKNCHSRSIFRDDVSGNQICSSCGIVQEFDNYDAQLGGINGPQGTFVRVGTSGSGS 60
Query: 61 VLNYKDKKIFEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY 120
VLNYKDKKI+EAQK+IEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY
Sbjct: 61 VLNYKDKKIYEAQKVIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY 120
Query: 121 VSMRKDNRPLPMSEVASAVECDLHELGRMVIRVVDFLDLKGPEFPVFDIVGSLERAARNS 180
VSMRKD+RPL MSEVASAVECDLHELGRMV+RVV+FLDL+G EFPVFDIVGSLERAARNS
Sbjct: 121 VSMRKDSRPLSMSEVASAVECDLHELGRMVMRVVEFLDLRGSEFPVFDIVGSLERAARNS 180
Query: 181 PSFSSVDADTLERIVKQGIFLLQCAVKWFLTTGRQPLPMVAAVLVLVSKLNEVNVSIDNV 240
PSFS ++AD LERIVKQGIFLLQCA+KWFLTTGRQPLPMVAAVLVLVSKLNEV+VSI+NV
Sbjct: 181 PSFSRLEADILERIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSKLNEVDVSIENV 240
Query: 241 AMEVHAKVSTCKKRYRELLEALVEVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSNAS 300
MEVHA VSTCKKRYRELLEALVEVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMS AS
Sbjct: 241 GMEVHANVSTCKKRYRELLEALVEVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSKAS 300
Query: 301 GKGKDLENVGIDLQSAVSECLRKELDYESEVNNLEDDSQYFELQGSSWHDESSCDNGNKL 360
GKGKDLENV IDLQSAVSECLRKEL+YESEV NLEDDSQYFELQ S W DES+ DNGN+L
Sbjct: 301 GKGKDLENVEIDLQSAVSECLRKELEYESEVYNLEDDSQYFELQRSRWQDESNRDNGNRL 360
Query: 361 NISHECLSLIYHKFLDEMAHLRLSGGIKEVYGRKQGRKAGVYSSTEWWEGKSELSKKLLL 420
NISHECLSLIY+KFLDEMA LR SGGI EVYG KQGRK G YSSTEWWEGKSELSKKLLL
Sbjct: 361 NISHECLSLIYNKFLDEMAELRSSGGINEVYGTKQGRKTGFYSSTEWWEGKSELSKKLLL 420
Query: 421 QQLLETDIGSQGIPPSFVSSCNAYKRRKEKVNAAKKRIERIMHPSSAPTGDVNTEKKRKR 480
QQLLETDIGSQGIPPSFVSSCNAY+RRKEKVNAAKKRI+RIMHPS+AP DVN +KKRKR
Sbjct: 421 QQLLETDIGSQGIPPSFVSSCNAYERRKEKVNAAKKRIQRIMHPSTAPADDVNIKKKRKR 480
Query: 481 KGANGIEWEDIIIETLLLHGVKEEEIEKGHYNVLLDLHVFNS 523
KGA+ IEWEDIIIETLLLHGV+EEEIEKGHY VLLDL+VF S
Sbjct: 481 KGADVIEWEDIIIETLLLHGVQEEEIEKGHYKVLLDLYVFTS 522
BLAST of Lsi02G008020 vs. NCBI nr
Match:
XP_023542889.1 (plant-specific TFIIB-related protein PTF2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 915.2 bits (2364), Expect = 2.5e-262
Identity = 457/522 (87.55%), Postives = 483/522 (92.53%), Query Frame = 0
Query: 1 MSGSCKNCHSRSLFRDDVSGNLICSSCGIVQEFDNYEAQLCGINGPQGTFVRVGTSGSGS 60
MSGSCKNC RSLFRDDVSGNLICSSCGIVQEFDNY+AQL G+NGPQGTFVRVGTSGSGS
Sbjct: 1 MSGSCKNCSGRSLFRDDVSGNLICSSCGIVQEFDNYDAQLGGLNGPQGTFVRVGTSGSGS 60
Query: 61 VLNYKDKKIFEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY 120
VLNYKDKKI+EAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYG GDWF ILVGAC+Y
Sbjct: 61 VLNYKDKKIYEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGQGDWFSILVGACSY 120
Query: 121 VSMRKDNRPLPMSEVASAVECDLHELGRMVIRVVDFLDLKGPEFPVFDIVGSLERAARNS 180
VSMRKDNRPLPMSEVAS +ECDLHELGRMV+RVVDFLDLKGP FP FDIVGSLERAARNS
Sbjct: 121 VSMRKDNRPLPMSEVASTIECDLHELGRMVLRVVDFLDLKGPAFPGFDIVGSLERAARNS 180
Query: 181 PSFSSVDADTLERIVKQGIFLLQCAVKWFLTTGRQPLPMVAAVLVLVSKLNEVNVSIDNV 240
PSFS V+ADTL+ IVKQGIFLLQCA+KWFLTTGRQPLPMVAAVLVLVS LNEVNVSID+V
Sbjct: 181 PSFSKVEADTLDIIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSGLNEVNVSIDDV 240
Query: 241 AMEVHAKVSTCKKRYRELLEALVEVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSNAS 300
AMEVHAKVSTCKKRYRELL ALVEVGKKLPWGKDIT +NIVKNAPFVIQYMELKSMSN
Sbjct: 241 AMEVHAKVSTCKKRYRELLGALVEVGKKLPWGKDITKRNIVKNAPFVIQYMELKSMSNTC 300
Query: 301 GKGKDLENVGIDLQSAVSECLRKELDYESEVNNLEDDSQYFELQGSSWHDESSCDNGNKL 360
G+GK+ E+VGIDLQ+AVSECLRKEL YESEVNNLEDDSQYFEL G+SW DESSCD+ NKL
Sbjct: 301 GRGKNFEDVGIDLQAAVSECLRKELQYESEVNNLEDDSQYFELIGNSWRDESSCDDRNKL 360
Query: 361 NISHECLSLIYHKFLDEMAHLRLSGGIKEVYGRKQGRKAGVYSSTEWWEGKSELSKKLLL 420
NISHECLSLIY KFLDEMAHLR SGGI E+YGRK GRKAG SSTEWWEGKS+LSKKLLL
Sbjct: 361 NISHECLSLIYTKFLDEMAHLRSSGGINEIYGRKLGRKAGFQSSTEWWEGKSQLSKKLLL 420
Query: 421 QQLLETDIGSQGIPPSFVSSCNAYKRRKEKVNAAKKRIERIMHPSSAPTGDVNTEKKRKR 480
QLLETD+G G+PPSFV+SCNAYKRRKEK+NAAK RI+RIM PS+A GDVN EK+RKR
Sbjct: 421 HQLLETDVGLNGMPPSFVTSCNAYKRRKEKINAAKNRIQRIMLPSNAAIGDVNAEKERKR 480
Query: 481 KGANGIEWEDIIIETLLLHGVKEEEIEKGHYNVLLDLHVFNS 523
K A GIEWEDIIIETLLLH VKEEEIEKGHYN LLDLHVF S
Sbjct: 481 KRAIGIEWEDIIIETLLLHDVKEEEIEKGHYNALLDLHVFGS 522
BLAST of Lsi02G008020 vs. NCBI nr
Match:
KAG6573303.1 (Plant-specific TFIIB-related protein PTF2, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 914.8 bits (2363), Expect = 3.3e-262
Identity = 458/522 (87.74%), Postives = 483/522 (92.53%), Query Frame = 0
Query: 1 MSGSCKNCHSRSLFRDDVSGNLICSSCGIVQEFDNYEAQLCGINGPQGTFVRVGTSGSGS 60
MSGSCKNC RSLFRDDVSGNLICSSCGIVQEFDNY+AQL G+NGPQGTFVRVGTSGSGS
Sbjct: 1 MSGSCKNCSGRSLFRDDVSGNLICSSCGIVQEFDNYDAQLGGLNGPQGTFVRVGTSGSGS 60
Query: 61 VLNYKDKKIFEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY 120
VLNYKDKKI+EAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYG GDWF ILVGAC+Y
Sbjct: 61 VLNYKDKKIYEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGQGDWFSILVGACSY 120
Query: 121 VSMRKDNRPLPMSEVASAVECDLHELGRMVIRVVDFLDLKGPEFPVFDIVGSLERAARNS 180
VSMRKDNRPLPMSEVAS +ECDLHELGRMV+RVVDFLDLKGP FP FDIVGSLERAARNS
Sbjct: 121 VSMRKDNRPLPMSEVASTIECDLHELGRMVLRVVDFLDLKGPAFPGFDIVGSLERAARNS 180
Query: 181 PSFSSVDADTLERIVKQGIFLLQCAVKWFLTTGRQPLPMVAAVLVLVSKLNEVNVSIDNV 240
PSFS V+ADTL+ IVKQGIFLLQCA+KWFLTTGRQPLPMVAAVLVLVS LNEVNVSID+V
Sbjct: 181 PSFSKVEADTLDVIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSGLNEVNVSIDDV 240
Query: 241 AMEVHAKVSTCKKRYRELLEALVEVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSNAS 300
AMEVHAKVSTCKKRYRELL ALVEVGKKLPWGKDIT +NIVKNAPFVIQYMELKSMSN
Sbjct: 241 AMEVHAKVSTCKKRYRELLGALVEVGKKLPWGKDITKRNIVKNAPFVIQYMELKSMSNTC 300
Query: 301 GKGKDLENVGIDLQSAVSECLRKELDYESEVNNLEDDSQYFELQGSSWHDESSCDNGNKL 360
G+GK+ E+VGIDLQ+AVSECLRKEL YESEVNNLEDDSQYFEL G+SW DESSCD+ NKL
Sbjct: 301 GQGKNFEDVGIDLQAAVSECLRKELQYESEVNNLEDDSQYFELIGNSWRDESSCDDRNKL 360
Query: 361 NISHECLSLIYHKFLDEMAHLRLSGGIKEVYGRKQGRKAGVYSSTEWWEGKSELSKKLLL 420
NISHECLSLIY KFLDEMAHLR SGGI E+YGRK GRKAG SSTEWWEGKS+LSKKLLL
Sbjct: 361 NISHECLSLIYTKFLDEMAHLRSSGGINEIYGRKLGRKAGFQSSTEWWEGKSQLSKKLLL 420
Query: 421 QQLLETDIGSQGIPPSFVSSCNAYKRRKEKVNAAKKRIERIMHPSSAPTGDVNTEKKRKR 480
QLLETDIG G+PPSFV+SCNAYKRRKEK+NAAK RI+RIM PS A GDVN EK+RKR
Sbjct: 421 HQLLETDIGLNGMPPSFVTSCNAYKRRKEKINAAKNRIQRIMLPSHAAIGDVNAEKERKR 480
Query: 481 KGANGIEWEDIIIETLLLHGVKEEEIEKGHYNVLLDLHVFNS 523
K A GIEWEDIIIETLLLH VKEEEIEKGHYN LLDLHVF+S
Sbjct: 481 KRAIGIEWEDIIIETLLLHDVKEEEIEKGHYNALLDLHVFSS 522
BLAST of Lsi02G008020 vs. TAIR 10
Match:
AT4G35540.1 (zinc ion binding;transcription regulators )
HSP 1 Score: 462.6 bits (1189), Expect = 4.2e-130
Identity = 249/532 (46.80%), Postives = 350/532 (65.79%), Query Frame = 0
Query: 5 CKNCHSRSLFRDDVSGNLICSSCGIVQEFDNYEAQLCGINGPQGTFVRVGTSGSGSVLNY 64
CK C+ + RD+ +GN C CG ++E+DNYEAQL GI GPQGT++RVGT G GSVL+Y
Sbjct: 3 CKRCNGSNFERDEDTGNSYCGGCGTLREYDNYEAQLGGIRGPQGTYIRVGTIGRGSVLDY 62
Query: 65 KDKKIFEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAYVSMR 124
KDKKI+EA +IE+ T RL +K+ ++ ++S +T+GE+G G+WFPIL+GAC Y +R
Sbjct: 63 KDKKIYEANNLIEETTERLNL-GNKTEVIKSMISKLTDGEFGQGEWFPILIGACCYAVVR 122
Query: 125 KDNR-PLPMSEVASAVECDLHELGRMVIRVVDFLDLKGPEFPVFDIVGSLERAARNSPSF 184
++ + L M EVA V CDLH+LG M+ RVVD LDL E FD+VG + NSP
Sbjct: 123 EEGKGVLSMEEVAYEVGCDLHQLGPMIKRVVDHLDL---ELREFDLVGLFTKTVTNSPRL 182
Query: 185 SSVDADTLERIVKQGIFLLQCAVKWFLTTGRQPLPMVAAVLVLVSKLNEVNVSIDNVAME 244
+ VD D E+I+KQG FL+ CA+KWFL+TGR+P+P+V AVL V ++N V V ID++A +
Sbjct: 183 TDVDRDKKEKIIKQGTFLMNCALKWFLSTGRRPMPLVVAVLAFVVQVNGVKVKIDDLAKD 242
Query: 245 VHAKVSTCKKRYRELLEALVEVGKK--LPWGKDITTKNIVKNAPFVIQYMELKSM-SNAS 304
++TCK RY+EL E LV+V ++ LPW KD+T KN++K++ + ME KSM
Sbjct: 243 ASVSLTTCKTRYKELSEKLVKVAEEVGLPWAKDVTVKNVLKHSGTLFALMEAKSMKKRKQ 302
Query: 305 GKGKDLENV-GIDLQSAVSECLRKELDYESEVNNLEDD-SQYFELQGSSWHDESSCDNGN 364
G GK+L G ++ V +CL KE Y + + +D S+YF+++G S C+ +
Sbjct: 303 GTGKELVRTDGFCVEDLVMDCLSKESMYCYDDDARQDTMSRYFDVEGE--RQLSLCNYDD 362
Query: 365 KLNISHECLSLIYHKFLDEMA----HLRLSGGIKEVYGRKQGRKAGVYSSTEWWEGKSEL 424
NIS LS Y++F D + R G + ++ R+ G+ S+ WW+GKSEL
Sbjct: 363 --NISENQLSTKYNEFEDRVCGGTLAKRSQGSSQSMWQRRS--VFGMVSTENWWKGKSEL 422
Query: 425 SKKLLLQQLLETDIGSQGIPPSFVSSCNAYKRRKEKVNAAKKRIERIMHPS-SAPTGDVN 484
SK+LLL+ LLE D+G + +PPS++ C A +RR+EK+ AAK RI I HPS + G ++
Sbjct: 423 SKRLLLKDLLEKDVGLEALPPSYIKGCVAVERRREKIKAAKLRINAIQHPSDNVSEGALS 482
Query: 485 TE---KKRKRKGANGIEWEDIIIETLLLHGVKEEEIEKGHYNVLLDLHVFNS 523
E K+KRK + I+WED++I+TL+LH V EEEIEKGHY LLDLHVFNS
Sbjct: 483 LELEHSKKKRKKGSEIDWEDLVIQTLVLHNVNEEEIEKGHYKTLLDLHVFNS 524
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
O81787 | 5.9e-129 | 46.80 | Plant-specific TFIIB-related protein PTF2 OS=Arabidopsis thaliana OX=3702 GN=PTF... | [more] |
Q4R318 | 1.2e-09 | 21.04 | Transcription factor IIIB 50 kDa subunit OS=Macaca fascicularis OX=9541 GN=BRF2 ... | [more] |
Q9HAW0 | 1.6e-09 | 21.22 | Transcription factor IIIB 50 kDa subunit OS=Homo sapiens OX=9606 GN=BRF2 PE=1 SV... | [more] |
Q3UAW9 | 6.1e-09 | 21.50 | Transcription factor IIIB 50 kDa subunit OS=Mus musculus OX=10090 GN=Brf2 PE=1 S... | [more] |
Q29S07 | 1.3e-08 | 21.15 | Transcription factor IIIB 50 kDa subunit OS=Bos taurus OX=9913 GN=BRF2 PE=2 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7UMA0 | 2.3e-277 | 91.95 | Transcription factor IIIB 50 kDa subunit OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
A0A1S3B6X4 | 2.3e-277 | 91.95 | transcription factor IIIB 50 kDa subunit OS=Cucumis melo OX=3656 GN=LOC103486826... | [more] |
A0A0A0M0A0 | 4.6e-270 | 90.23 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G477510 PE=4 SV=1 | [more] |
A0A6J1JZD6 | 2.1e-262 | 87.55 | plant-specific TFIIB-related protein PTF2 OS=Cucurbita maxima OX=3661 GN=LOC1114... | [more] |
A0A6J1GSR8 | 3.9e-261 | 86.97 | plant-specific TFIIB-related protein PTF2 OS=Cucurbita moschata OX=3662 GN=LOC11... | [more] |
Match Name | E-value | Identity | Description | |
XP_038893651.1 | 2.1e-285 | 95.01 | plant-specific TFIIB-related protein PTF2 [Benincasa hispida] | [more] |
XP_008443157.1 | 4.7e-277 | 91.95 | PREDICTED: transcription factor IIIB 50 kDa subunit [Cucumis melo] >KAA0057033.1... | [more] |
XP_004149065.1 | 9.5e-270 | 90.23 | plant-specific TFIIB-related protein PTF2 [Cucumis sativus] >KGN65641.1 hypothet... | [more] |
XP_023542889.1 | 2.5e-262 | 87.55 | plant-specific TFIIB-related protein PTF2 [Cucurbita pepo subsp. pepo] | [more] |
KAG6573303.1 | 3.3e-262 | 87.74 | Plant-specific TFIIB-related protein PTF2, partial [Cucurbita argyrosperma subsp... | [more] |
Match Name | E-value | Identity | Description | |
AT4G35540.1 | 4.2e-130 | 46.80 | zinc ion binding;transcription regulators | [more] |