Lsi02G007640 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi02G007640
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Descriptionlate embryogenesis abundant protein, group 3-like
Locationchr02: 7045171 .. 7046110 (+)
RNA-Seq ExpressionLsi02G007640
SyntenyLsi02G007640
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATAATAAAAAAAAATCACAAATTCAAGCTAAAAAGGCCAAAGAGAAGGAAAAAGCTGTGTTAGGAAGAACGAAATTGAAACAAAAATGGCAGTAAGCATTTCGTTAGCGAAGAATGTGATCTTCAATCTCTGTAAATCCAAGGCTTTTCCCAATGCTTCTCCTCCATCTCTCAAACACTCCACCAAAATTTCATCCCTCTCTTTCTCTACTTTCGCCTCTAAACATCCCTCATGGGTACAACTTTTTCCTTCCATGCATTTTCTATTTACATCCTTTAACATAGTATCAGAGCTTATTGACAGATATTTTTCAATTAACGTGTAGGATGGAAACGGTGTGGATGCGAACAGAGACTCGAGGGCAGACTATGCGTACGAAGATGCGAAGGAACGAGCTAAGGAAGGAGCCCAAGAAATGAAGGAGAAGGCGAAAGACTATGCAAAGGGGACGAAAGACATGGCGGCGGAGGAAACAAATAAAGCCTCAGAGACCGCACGGGCGGCGAAGGAGAAGGTAAAAGACTATGCATATGACACCAAGGAGAAGGCGAAGGAAGGGACGAACCGAGCGGCGGAGAGGGCGGAGGAGGTGACGGAGAGAGCAAAGGAAGGTGCAAAGGGAATGAAGGAGAAGACGGAGGAGATGGCGAAGGAGGGGACGAAGAAGGCAACGGAGACGGTGCAAAGTATTGGGGAGAAGGCGAAGGAGACGGTGCAAGGGGCGTGGGAGGCGGCGAAGGATACGACGAATAAGATAAAGGAGAAGGTAATGGGGAGTGAGGAAGAAGGTGAAGAAGGAAGGAGGAGAGATAGGGAGGAAGGAGGTGGGAAGGTGATGGATGAAGATGTTGTGGATCTTAGGAGAAAAGCTGGGAACAAGTTTGATGAATGAATTAAATATTTTCAATAATAATGGGTTAGAGTTATGCTTTTCCTAC

mRNA sequence

AAATAATAAAAAAAAATCACAAATTCAAGCTAAAAAGGCCAAAGAGAAGGAAAAAGCTGTGTTAGGAAGAACGAAATTGAAACAAAAATGGCAGTAAGCATTTCGTTAGCGAAGAATGTGATCTTCAATCTCTGTAAATCCAAGGCTTTTCCCAATGCTTCTCCTCCATCTCTCAAACACTCCACCAAAATTTCATCCCTCTCTTTCTCTACTTTCGCCTCTAAACATCCCTCATGGGATGGAAACGGTGTGGATGCGAACAGAGACTCGAGGGCAGACTATGCGTACGAAGATGCGAAGGAACGAGCTAAGGAAGGAGCCCAAGAAATGAAGGAGAAGGCGAAAGACTATGCAAAGGGGACGAAAGACATGGCGGCGGAGGAAACAAATAAAGCCTCAGAGACCGCACGGGCGGCGAAGGAGAAGGTAAAAGACTATGCATATGACACCAAGGAGAAGGCGAAGGAAGGGACGAACCGAGCGGCGGAGAGGGCGGAGGAGGTGACGGAGAGAGCAAAGGAAGGTGCAAAGGGAATGAAGGAGAAGACGGAGGAGATGGCGAAGGAGGGGACGAAGAAGGCAACGGAGACGGTGCAAAGTATTGGGGAGAAGGCGAAGGAGACGGTGCAAGGGGCGTGGGAGGCGGCGAAGGATACGACGAATAAGATAAAGGAGAAGGTAATGGGGAGTGAGGAAGAAGGTGAAGAAGGAAGGAGGAGAGATAGGGAGGAAGGAGGTGGGAAGGTGATGGATGAAGATGTTGTGGATCTTAGGAGAAAAGCTGGGAACAAGTTTGATGAATGAATTAAATATTTTCAATAATAATGGGTTAGAGTTATGCTTTTCCTAC

Coding sequence (CDS)

ATGGCAGTAAGCATTTCGTTAGCGAAGAATGTGATCTTCAATCTCTGTAAATCCAAGGCTTTTCCCAATGCTTCTCCTCCATCTCTCAAACACTCCACCAAAATTTCATCCCTCTCTTTCTCTACTTTCGCCTCTAAACATCCCTCATGGGATGGAAACGGTGTGGATGCGAACAGAGACTCGAGGGCAGACTATGCGTACGAAGATGCGAAGGAACGAGCTAAGGAAGGAGCCCAAGAAATGAAGGAGAAGGCGAAAGACTATGCAAAGGGGACGAAAGACATGGCGGCGGAGGAAACAAATAAAGCCTCAGAGACCGCACGGGCGGCGAAGGAGAAGGTAAAAGACTATGCATATGACACCAAGGAGAAGGCGAAGGAAGGGACGAACCGAGCGGCGGAGAGGGCGGAGGAGGTGACGGAGAGAGCAAAGGAAGGTGCAAAGGGAATGAAGGAGAAGACGGAGGAGATGGCGAAGGAGGGGACGAAGAAGGCAACGGAGACGGTGCAAAGTATTGGGGAGAAGGCGAAGGAGACGGTGCAAGGGGCGTGGGAGGCGGCGAAGGATACGACGAATAAGATAAAGGAGAAGGTAATGGGGAGTGAGGAAGAAGGTGAAGAAGGAAGGAGGAGAGATAGGGAGGAAGGAGGTGGGAAGGTGATGGATGAAGATGTTGTGGATCTTAGGAGAAAAGCTGGGAACAAGTTTGATGAATGA

Protein sequence

MAVSISLAKNVIFNLCKSKAFPNASPPSLKHSTKISSLSFSTFASKHPSWDGNGVDANRDSRADYAYEDAKERAKEGAQEMKEKAKDYAKGTKDMAAEETNKASETARAAKEKVKDYAYDTKEKAKEGTNRAAERAEEVTERAKEGAKGMKEKTEEMAKEGTKKATETVQSIGEKAKETVQGAWEAAKDTTNKIKEKVMGSEEEGEEGRRRDREEGGGKVMDEDVVDLRRKAGNKFDE
Homology
BLAST of Lsi02G007640 vs. ExPASy Swiss-Prot
Match: O49817 (Late embryogenesis abundant protein 2 OS=Cicer arietinum OX=3827 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 6.4e-06
Identity = 50/140 (35.71%), Postives = 75/140 (53.57%), Query Frame = 0

Query: 65  YAYEDAKERAKEGAQEMKEKAKDYAKGTKDMAAEET----NKASETARAAKEKVKDYAYD 124
           Y   +AK R +E   +M    +D A+  K+ A +      +K S+TA+AAKEK +  A  
Sbjct: 8   YRAGEAKGRTEEKTNQMIGNIEDKAQAAKEKAQQAAQTAKDKTSQTAQAAKEKTQQTAQA 67

Query: 125 TKEKAKEGTNRAAERAEEVTERAKEGAKGMKEKTEEMAKEGTKKATETVQSIGEKAKETV 184
            K+K ++ T    E+A++ T RAKE    M + T+E A+ G   +   +Q  GEKAK   
Sbjct: 68  AKDKTQQTTQATKEKAQDTTGRAKEKGSEMGQSTKETAQSGKDNSAGFLQQTGEKAKGMA 127

Query: 185 QGAWEAAKDT---TNKIKEK 198
           QGA +A K T   TN  ++K
Sbjct: 128 QGATDAVKQTFGMTNDDQDK 147

BLAST of Lsi02G007640 vs. ExPASy Swiss-Prot
Match: P23283 (Desiccation-related protein PCC3-06 OS=Craterostigma plantagineum OX=4153 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.1e-05
Identity = 60/195 (30.77%), Postives = 90/195 (46.15%), Query Frame = 0

Query: 18  SKAFP-NASPPSLKHSTKISSLSFSTFASKHPSWDGNGVDANRDSRADYAYEDAKERAKE 77
           SK+FP N SP  L    K S + F+T AS+                             +
Sbjct: 16  SKSFPKNNSPTYLTLRPKFSRVRFTTVASQ----------------------------SQ 75

Query: 78  GAQEMKEKAKDYAKGTKDMAAEETNKASETARAAKEKVKDYAYDTKEKAKEGTNRAAERA 137
           G Q++ E A+D  K   +      +K SE   +A  K    A +T +KAKE  N A+ +A
Sbjct: 76  GRQQVSENAEDAKKKFSETTDSLKHKTSEATDSASHKANGAARETNDKAKETYNAASGKA 135

Query: 138 EEVTERAKEGAKGMKEKTEEM---AKEGTKKATET----VQSIGEKAKETVQGAWEAAKD 197
            E+ ++ +EGA+ ++EK  +    A E T+ A E     V ++G+  KE V GA E  K+
Sbjct: 136 GELKDKTQEGAENVREKAMDAGNDAMEKTRNAGERVADGVSNVGQNVKENVMGAGEKVKE 182

Query: 198 TTNKIKEKVMGSEEE 205
               +K+ VMG  EE
Sbjct: 196 FAEDVKDTVMGKSEE 182

BLAST of Lsi02G007640 vs. ExPASy Swiss-Prot
Match: O49816 (Late embryogenesis abundant protein 1 OS=Cicer arietinum OX=3827 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.1e-05
Identity = 46/131 (35.11%), Postives = 68/131 (51.91%), Query Frame = 0

Query: 68  EDAKERAKEGAQEMKEKAKDYAKGTKDMAAEET--------NKASETARAAKEKVKDYAY 127
           ED  + AKE AQ+  + AKD    T   A E+T         K  +TA+AAK++ +  A 
Sbjct: 29  EDKAQAAKEKAQQAAQTAKDKTSQTAQAAKEKTQQTAQAAKEKTQQTAQAAKDETQQTAQ 88

Query: 128 DTKEKAKEGTNRAAERAEEVTERAKEGAKGMKEKTEEMAKEGTKKATETVQSIGEKAKET 187
             K+K ++ T    E+A++ T RA+E    M + T+E A+ G   +   +Q  GEK K  
Sbjct: 89  AAKDKTQQTTEATKEKAQDTTGRAREKGSEMGQSTKETAQSGKDNSAGFLQQTGEKVKGM 148

Query: 188 VQGAWEAAKDT 191
            QGA +A K T
Sbjct: 149 AQGATDAVKQT 159

BLAST of Lsi02G007640 vs. ExPASy Swiss-Prot
Match: Q03968 (Late embryogenesis abundant protein, group 3 OS=Triticum aestivum OX=4565 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 3.2e-05
Identity = 48/139 (34.53%), Postives = 74/139 (53.24%), Query Frame = 0

Query: 62  RADYAYEDAKERAKEGAQEMKEKAKDYAKGTKDMAAEETNKASETARAAKEKVKDYAYDT 121
           +A    E  K++A E  +  K+KA + A+ TK  AAE  +K ++TA+AAKEK  + A   
Sbjct: 44  KAGETTEATKQKAAETTEAAKQKASETAEATKQKAAEAKDKTAQTAQAAKEKTYETAQSA 103

Query: 122 KEKAKEGTNRAAERAEEVTERAKEGAKGMKEKTEEMAKEGTKKATETVQSIGEKAKETVQ 181
           KE+A +G ++ A    E TE A       K+K  E  +   +KA E  ++  +KA ET Q
Sbjct: 104 KERAAQGKDQTASTLGEKTEAA-------KQKAAETTEAARQKAAEATEAAKQKASETAQ 163

Query: 182 GAWEAA---KDTTNKIKEK 198
              E+A   KD T  + ++
Sbjct: 164 YTKESAVTGKDKTGSVLQQ 175

BLAST of Lsi02G007640 vs. ExPASy TrEMBL
Match: A0A0A0LRY0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G074950 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.3e-83
Identity = 193/254 (75.98%), Postives = 210/254 (82.68%), Query Frame = 0

Query: 1   MAVSISLAKNVIFNLCKSK-AFPNASPPSL--KHSTKISSLSFSTFASKHPSWDGNGVDA 60
           MA+SISLAKNVIFNLCK K AF N+SP      HSTK+SSLSFST ASKHPSWDGNGVDA
Sbjct: 1   MALSISLAKNVIFNLCKPKAAFANSSPSLFLNNHSTKLSSLSFSTSASKHPSWDGNGVDA 60

Query: 61  NRDSRADYAYEDA-----------KERAKEGAQEMKEKAKDYAKGTKDMAAEETNKASET 120
           NRDS  DYAYEDA           KERAKEGA+EMKEKAKDY++ TK+  AE+TNKASET
Sbjct: 61  NRDSSPDYAYEDAKEQAKEEAKEMKERAKEGAKEMKEKAKDYSQETKEKVAEKTNKASET 120

Query: 121 ARAAKEKVKDYAYDTKEKAKEGTNRAAERAEEVTERAKEGAKGMKEKTEEMAKEGTKKAT 180
           A AAKEKVKDYA D KEKAKEGTNRA E  EE TERAKEGAKGMK+KT+EMAKEGT KAT
Sbjct: 121 ASAAKEKVKDYARDAKEKAKEGTNRATETVEEATERAKEGAKGMKDKTKEMAKEGTNKAT 180

Query: 181 ETVQSIGEKAKETVQGAWEAAKDTTNKIKEKVMG--SEEEGEEGRRRDREEGGGKVMDED 239
           ET+Q+IGEKAK+TVQGAWEAAKDTTNK+KEKVMG  +EEE EEGRR       GKVMDED
Sbjct: 181 ETMQNIGEKAKQTVQGAWEAAKDTTNKVKEKVMGTNNEEEDEEGRR-------GKVMDED 240

BLAST of Lsi02G007640 vs. ExPASy TrEMBL
Match: A0A5D3DRU4 (ABA-inducible protein PHV A1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00910 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 3.0e-83
Identity = 193/242 (79.75%), Postives = 206/242 (85.12%), Query Frame = 0

Query: 1   MAVSISLAKNVIFNLCKSK-AFPNASPP-SLKHSTKISSLSFSTFASKHPSWDGNGVDAN 60
           MAVSISLAKNVIFNLCK K AF N+SP   L  STKISSLSFST ASKHPSWDGNGVD N
Sbjct: 1   MAVSISLAKNVIFNLCKPKAAFANSSPSLFLNKSTKISSLSFSTSASKHPSWDGNGVDPN 60

Query: 61  RDSRADYAYEDAKERAKEGAQEMKEKAKDYAKGTKDMAAEETNKASETARAAKEKVKDYA 120
           RDSRADYAYEDAKERAKEGA+EMKEKAK+  +  K+ AAE+  +ASETA AAKEKVKDYA
Sbjct: 61  RDSRADYAYEDAKERAKEGAKEMKEKAKENTQEAKEKAAEKAKRASETASAAKEKVKDYA 120

Query: 121 YDTKEKAKEGTNRAAERAEEVTERAKEGAKGMKEKTEEMAKEGTKKATETVQSIGEKAKE 180
            D KEKAKEGT RA E  EE TERAKEGAKGMKEKTEEMAKEGT KATETVQ+IGEKAK+
Sbjct: 121 RDAKEKAKEGTYRATETVEEATERAKEGAKGMKEKTEEMAKEGTNKATETVQNIGEKAKQ 180

Query: 181 TVQGAWEAAKDTTNKIKEKVMG--SEEEGEEGRRRDREEGGGKVMDEDVVDLRRKAGNKF 239
           TVQGAWEAAKDTTNK+KEKVMG  +EEE EEGRR       GKVMDEDVV+LRRKAGNK+
Sbjct: 181 TVQGAWEAAKDTTNKMKEKVMGTNNEEEVEEGRR-------GKVMDEDVVELRRKAGNKY 235

BLAST of Lsi02G007640 vs. ExPASy TrEMBL
Match: A0A1S3B5V3 (ABA-inducible protein PHV A1-like OS=Cucumis melo OX=3656 GN=LOC103486504 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 3.0e-83
Identity = 193/242 (79.75%), Postives = 206/242 (85.12%), Query Frame = 0

Query: 1   MAVSISLAKNVIFNLCKSK-AFPNASPP-SLKHSTKISSLSFSTFASKHPSWDGNGVDAN 60
           MAVSISLAKNVIFNLCK K AF N+SP   L  STKISSLSFST ASKHPSWDGNGVD N
Sbjct: 1   MAVSISLAKNVIFNLCKPKAAFANSSPSLFLNKSTKISSLSFSTSASKHPSWDGNGVDPN 60

Query: 61  RDSRADYAYEDAKERAKEGAQEMKEKAKDYAKGTKDMAAEETNKASETARAAKEKVKDYA 120
           RDSRADYAYEDAKERAKEGA+EMKEKAK+  +  K+ AAE+  +ASETA AAKEKVKDYA
Sbjct: 61  RDSRADYAYEDAKERAKEGAKEMKEKAKENTQEAKEKAAEKAKRASETASAAKEKVKDYA 120

Query: 121 YDTKEKAKEGTNRAAERAEEVTERAKEGAKGMKEKTEEMAKEGTKKATETVQSIGEKAKE 180
            D KEKAKEGT RA E  EE TERAKEGAKGMKEKTEEMAKEGT KATETVQ+IGEKAK+
Sbjct: 121 RDAKEKAKEGTYRATETVEEATERAKEGAKGMKEKTEEMAKEGTNKATETVQNIGEKAKQ 180

Query: 181 TVQGAWEAAKDTTNKIKEKVMG--SEEEGEEGRRRDREEGGGKVMDEDVVDLRRKAGNKF 239
           TVQGAWEAAKDTTNK+KEKVMG  +EEE EEGRR       GKVMDEDVV+LRRKAGNK+
Sbjct: 181 TVQGAWEAAKDTTNKMKEKVMGTNNEEEVEEGRR-------GKVMDEDVVELRRKAGNKY 235

BLAST of Lsi02G007640 vs. ExPASy TrEMBL
Match: A0A6J1K2X8 (late embryogenesis abundant protein, group 3-like OS=Cucurbita maxima OX=3661 GN=LOC111490179 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 7.9e-76
Identity = 179/239 (74.90%), Postives = 200/239 (83.68%), Query Frame = 0

Query: 1   MAVSISLAKNVIFNLCKSKAFPNASP-PSLKHSTKISSLSFSTFASKHPSWDGNGVDANR 60
           MAVSISLAKNVIFNLC  KAFPNASP P+L++STKIS +SF+T ASK P W+G+GVDANR
Sbjct: 1   MAVSISLAKNVIFNLC--KAFPNASPSPTLRYSTKISRVSFTTSASKQP-WNGHGVDANR 60

Query: 61  DSRADYAYEDAKERAKEGAQEMKEKAKDYAKGTKDMAAEETNKASETARAAKEKVKDYAY 120
           D R D AYEDAK RAKEGAQ+MKEKAKDYA+GTKDMA EETNKA+ETARAAKEKVKDYA 
Sbjct: 61  DPRPDLAYEDAKGRAKEGAQDMKEKAKDYAEGTKDMAKEETNKAAETARAAKEKVKDYAD 120

Query: 121 DTKEKAKEGTNRAAERAEEVTERAKEGAKGMKEKTEEMAKEGTKKATETVQSIGEKAKET 180
           D KEKAKEGTNR AE AE+ +ERAKE AKGMKEKTEEMAKEGTKKATETVQ+IGEKAK+T
Sbjct: 121 DAKEKAKEGTNRVAETAEDASERAKESAKGMKEKTEEMAKEGTKKATETVQNIGEKAKKT 180

Query: 181 VQGAWEAAKDTTNKIKEKVMGSEEEGEEGRRRDREEGGGKVMDEDVVDLRRKAGNKFDE 239
           V+GAWEAAKDTT KIKE+V+GS+E+                 DEDVVDLRR +G K D+
Sbjct: 181 VEGAWEAAKDTTQKIKERVVGSDEDER---------------DEDVVDLRR-SGRKLDD 220

BLAST of Lsi02G007640 vs. ExPASy TrEMBL
Match: A0A6J1GR50 (late embryogenesis abundant protein, group 3 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456764 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 5.7e-74
Identity = 174/239 (72.80%), Postives = 197/239 (82.43%), Query Frame = 0

Query: 1   MAVSISLAKNVIFNLCKSKAFPNASP-PSLKHSTKISSLSFSTFASKHPSWDGNGVDANR 60
           MAVSISLAKNVIFNL   KAFPNASP  +L++S+KIS +SF+T ASK P W+G+G DANR
Sbjct: 1   MAVSISLAKNVIFNLW--KAFPNASPSQTLRYSSKISRVSFTTSASKQP-WNGHGADANR 60

Query: 61  DSRADYAYEDAKERAKEGAQEMKEKAKDYAKGTKDMAAEETNKASETARAAKEKVKDYAY 120
           D R D AYEDAKERAKEGA +MKEKAKDYA+GTKDMA EETNKA+ETARAAKEKVKDYA 
Sbjct: 61  DPRPDLAYEDAKERAKEGAYDMKEKAKDYAEGTKDMAKEETNKAAETARAAKEKVKDYAD 120

Query: 121 DTKEKAKEGTNRAAERAEEVTERAKEGAKGMKEKTEEMAKEGTKKATETVQSIGEKAKET 180
           D +EKAKEGTNR AE AE+ +ERAKE AKGMKEKTEEMAKEGTKKATETVQ+IGEKAK T
Sbjct: 121 DAREKAKEGTNRVAETAEDASERAKESAKGMKEKTEEMAKEGTKKATETVQNIGEKAKRT 180

Query: 181 VQGAWEAAKDTTNKIKEKVMGSEEEGEEGRRRDREEGGGKVMDEDVVDLRRKAGNKFDE 239
           V+GAWEAAKDTT KIKE+V+GS+E+                 DEDVVD+RRK+G K D+
Sbjct: 181 VEGAWEAAKDTTQKIKERVVGSDEDER---------------DEDVVDVRRKSGRKLDD 221

BLAST of Lsi02G007640 vs. NCBI nr
Match: XP_038876990.1 (late embryogenesis abundant protein 1-like [Benincasa hispida])

HSP 1 Score: 349.0 bits (894), Expect = 3.3e-92
Identity = 209/243 (86.01%), Postives = 214/243 (88.07%), Query Frame = 0

Query: 1   MAVSISLAKNVIFNLCKSKAF--PNASPPSLKHSTKISSLSFSTFASKHPSWDGNGVDAN 60
           MAVSISLAKNVIFNLCK KAF  PNASPPSLK STKISSLSFST ASKHPSWDG  VDAN
Sbjct: 1   MAVSISLAKNVIFNLCKPKAFPNPNASPPSLKRSTKISSLSFSTSASKHPSWDGKEVDAN 60

Query: 61  RDSRADYAYEDAKERAKEGAQEMKEKAKDYAKGTKDMAAEETNKASETARAAKEKVKDYA 120
           RDSRADYAYEDAKERAKEGAQEMKEKAKDYAKGTKDMA EET+KASETARAAKEKVKDY 
Sbjct: 61  RDSRADYAYEDAKERAKEGAQEMKEKAKDYAKGTKDMAVEETSKASETARAAKEKVKDYT 120

Query: 121 YDTKEKAKEGTNRAAERAEEVTERAKEGAKGMKEKTEEMAKEGTKKATETVQSIGEKAKE 180
           +D KEK KEGTNRAAE AE  TERAKEGAKGMKEK EEMA EG  K    VQ+IGEKAKE
Sbjct: 121 HDAKEKVKEGTNRAAETAEAATERAKEGAKGMKEKAEEMAGEGRNK----VQNIGEKAKE 180

Query: 181 TVQGAWEAAKDTTNKIKEKVMGSEEEGEEG---RRRDREEGGGKVMDEDVVDLRRKAGNK 239
           TVQGAWEAAKDTTNKIKEKVMGSEEEGEEG   RRR+RE+  GKVMDED VDLRRKAG K
Sbjct: 181 TVQGAWEAAKDTTNKIKEKVMGSEEEGEEGRRRRRREREDEDGKVMDED-VDLRRKAGTK 238

BLAST of Lsi02G007640 vs. NCBI nr
Match: XP_004146655.2 (late embryogenesis abundant protein, group 3 [Cucumis sativus] >KAE8652720.1 hypothetical protein Csa_013730 [Cucumis sativus])

HSP 1 Score: 319.3 bits (817), Expect = 2.8e-83
Identity = 193/254 (75.98%), Postives = 210/254 (82.68%), Query Frame = 0

Query: 1   MAVSISLAKNVIFNLCKSK-AFPNASPPSL--KHSTKISSLSFSTFASKHPSWDGNGVDA 60
           MA+SISLAKNVIFNLCK K AF N+SP      HSTK+SSLSFST ASKHPSWDGNGVDA
Sbjct: 29  MALSISLAKNVIFNLCKPKAAFANSSPSLFLNNHSTKLSSLSFSTSASKHPSWDGNGVDA 88

Query: 61  NRDSRADYAYEDA-----------KERAKEGAQEMKEKAKDYAKGTKDMAAEETNKASET 120
           NRDS  DYAYEDA           KERAKEGA+EMKEKAKDY++ TK+  AE+TNKASET
Sbjct: 89  NRDSSPDYAYEDAKEQAKEEAKEMKERAKEGAKEMKEKAKDYSQETKEKVAEKTNKASET 148

Query: 121 ARAAKEKVKDYAYDTKEKAKEGTNRAAERAEEVTERAKEGAKGMKEKTEEMAKEGTKKAT 180
           A AAKEKVKDYA D KEKAKEGTNRA E  EE TERAKEGAKGMK+KT+EMAKEGT KAT
Sbjct: 149 ASAAKEKVKDYARDAKEKAKEGTNRATETVEEATERAKEGAKGMKDKTKEMAKEGTNKAT 208

Query: 181 ETVQSIGEKAKETVQGAWEAAKDTTNKIKEKVMG--SEEEGEEGRRRDREEGGGKVMDED 239
           ET+Q+IGEKAK+TVQGAWEAAKDTTNK+KEKVMG  +EEE EEGRR       GKVMDED
Sbjct: 209 ETMQNIGEKAKQTVQGAWEAAKDTTNKVKEKVMGTNNEEEDEEGRR-------GKVMDED 268

BLAST of Lsi02G007640 vs. NCBI nr
Match: XP_008442715.1 (PREDICTED: ABA-inducible protein PHV A1-like [Cucumis melo] >KAA0057000.1 ABA-inducible protein PHV A1-like [Cucumis melo var. makuwa] >TYK26427.1 ABA-inducible protein PHV A1-like [Cucumis melo var. makuwa])

HSP 1 Score: 318.2 bits (814), Expect = 6.2e-83
Identity = 193/242 (79.75%), Postives = 206/242 (85.12%), Query Frame = 0

Query: 1   MAVSISLAKNVIFNLCKSK-AFPNASPP-SLKHSTKISSLSFSTFASKHPSWDGNGVDAN 60
           MAVSISLAKNVIFNLCK K AF N+SP   L  STKISSLSFST ASKHPSWDGNGVD N
Sbjct: 1   MAVSISLAKNVIFNLCKPKAAFANSSPSLFLNKSTKISSLSFSTSASKHPSWDGNGVDPN 60

Query: 61  RDSRADYAYEDAKERAKEGAQEMKEKAKDYAKGTKDMAAEETNKASETARAAKEKVKDYA 120
           RDSRADYAYEDAKERAKEGA+EMKEKAK+  +  K+ AAE+  +ASETA AAKEKVKDYA
Sbjct: 61  RDSRADYAYEDAKERAKEGAKEMKEKAKENTQEAKEKAAEKAKRASETASAAKEKVKDYA 120

Query: 121 YDTKEKAKEGTNRAAERAEEVTERAKEGAKGMKEKTEEMAKEGTKKATETVQSIGEKAKE 180
            D KEKAKEGT RA E  EE TERAKEGAKGMKEKTEEMAKEGT KATETVQ+IGEKAK+
Sbjct: 121 RDAKEKAKEGTYRATETVEEATERAKEGAKGMKEKTEEMAKEGTNKATETVQNIGEKAKQ 180

Query: 181 TVQGAWEAAKDTTNKIKEKVMG--SEEEGEEGRRRDREEGGGKVMDEDVVDLRRKAGNKF 239
           TVQGAWEAAKDTTNK+KEKVMG  +EEE EEGRR       GKVMDEDVV+LRRKAGNK+
Sbjct: 181 TVQGAWEAAKDTTNKMKEKVMGTNNEEEVEEGRR-------GKVMDEDVVELRRKAGNKY 235

BLAST of Lsi02G007640 vs. NCBI nr
Match: XP_023542553.1 (late embryogenesis abundant protein, group 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 308.5 bits (789), Expect = 4.9e-80
Identity = 182/239 (76.15%), Postives = 208/239 (87.03%), Query Frame = 0

Query: 1   MAVSISLAKNVIFNLCKSKAFPNASP-PSLKHSTKISSLSFSTFASKHPSWDGNGVDANR 60
           MAVSISLAKNVIFNLC  KAFPNASP P+L++S+KIS +SF+T ASK P W+G+G DANR
Sbjct: 1   MAVSISLAKNVIFNLC--KAFPNASPSPTLRYSSKISRVSFTTSASKQP-WNGHGADANR 60

Query: 61  DSRADYAYEDAKERAKEGAQEMKEKAKDYAKGTKDMAAEETNKASETARAAKEKVKDYAY 120
           D R D AYEDAKERAKEGA +MKEKAKDYA+GTKDMA EETNKA+ETARAAKEKVKDYA 
Sbjct: 61  DPRPDLAYEDAKERAKEGAYDMKEKAKDYAEGTKDMAKEETNKAAETARAAKEKVKDYAD 120

Query: 121 DTKEKAKEGTNRAAERAEEVTERAKEGAKGMKEKTEEMAKEGTKKATETVQSIGEKAKET 180
           D +EKAKEGTNR AE AE+ +ERAKE AKGMKEKTE+MAKEGTKKATETVQ+IGE+AK+T
Sbjct: 121 DAREKAKEGTNRVAETAEDASERAKESAKGMKEKTEDMAKEGTKKATETVQNIGERAKKT 180

Query: 181 VQGAWEAAKDTTNKIKEKVMGSEEEGEEGRRRDREEGGGKVMDEDVVDLRRKAGNKFDE 239
           V+GAWEAAKDTT KIKE+V+GS+E+  E      EE GGKVMDEDVVD+RRK+G K D+
Sbjct: 181 VEGAWEAAKDTTQKIKERVVGSDEDEGE------EERGGKVMDEDVVDVRRKSGRKLDD 230

BLAST of Lsi02G007640 vs. NCBI nr
Match: KAG6573277.1 (hypothetical protein SDJN03_27164, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 298.9 bits (764), Expect = 3.9e-77
Identity = 179/239 (74.90%), Postives = 203/239 (84.94%), Query Frame = 0

Query: 1   MAVSISLAKNVIFNLCKSKAFPNASP-PSLKHSTKISSLSFSTFASKHPSWDGNGVDANR 60
           MAVSISLAKNVIFNLC  KAFPNASP P+L++S+KIS +SF+T ASK P W+G+G DANR
Sbjct: 1   MAVSISLAKNVIFNLC--KAFPNASPSPTLRYSSKISRVSFTTSASKQP-WNGHGTDANR 60

Query: 61  DSRADYAYEDAKERAKEGAQEMKEKAKDYAKGTKDMAAEETNKASETARAAKEKVKDYAY 120
           D R D AYEDAKERAKEGA +MKEKAKDYA+GTKDMA EETNKA+ETARAAKEKVKDYA 
Sbjct: 61  DPRPDLAYEDAKERAKEGAYDMKEKAKDYAEGTKDMAKEETNKAAETARAAKEKVKDYAN 120

Query: 121 DTKEKAKEGTNRAAERAEEVTERAKEGAKGMKEKTEEMAKEGTKKATETVQSIGEKAKET 180
           D +EKAKEGTNR AE AE+ +ERAKE AKGMKEKTEEMAKEGTKKATETVQ+IGEKAK T
Sbjct: 121 DAREKAKEGTNRVAETAEDASERAKESAKGMKEKTEEMAKEGTKKATETVQNIGEKAKRT 180

Query: 181 VQGAWEAAKDTTNKIKEKVMGSEEEGEEGRRRDREEGGGKVMDEDVVDLRRKAGNKFDE 239
           V+GAWEAAKDTT KIKE+V+GS+E+      RD +E      DEDVVD+RRK+G K D+
Sbjct: 181 VEGAWEAAKDTTQKIKERVVGSDED-----ERDEDE-----RDEDVVDVRRKSGRKLDD 226

BLAST of Lsi02G007640 vs. TAIR 10
Match: AT5G44310.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 98.2 bits (243), Expect = 9.4e-21
Identity = 75/178 (42.13%), Postives = 108/178 (60.67%), Query Frame = 0

Query: 55  VDANRDSRADYAYEDAKERAKEGAQEMKEKAKDYAKGTKDMAAEETNKASETARAAKEKV 114
           V+      AD AYE  KE+AK+ A ++KEK KD+A+ TK+   E  ++A++ A   KEK 
Sbjct: 119 VNEGASRAADKAYE-TKEKAKDKAYDVKEKTKDFAEETKEKVNEGASRAADKAYDVKEKT 178

Query: 115 KDYAYDTKEKAKEGTNRAAERAEEVTERAKEGAKGMKEKTEEMAKEGTKKATETVQSIGE 174
           K+YA  TK+K  EG +RAA++AEE  ++AK+ A+  KEK E+MA    +KA    Q IGE
Sbjct: 179 KNYAEQTKDKVNEGASRAADKAEETKDKAKDYAEDSKEKAEDMAHGFKEKA----QDIGE 238

Query: 175 KAKETVQGAWEAAKDTTNKIKEKVMGSEEEGEEGRRRDREEGGGKVMDEDVVDLRRKA 233
           K  +TV+  WE AK T  K+ E V+GS EE ++ R           +D+ + DL +KA
Sbjct: 239 KTMDTVKDVWETAKSTAQKVTEAVVGSGEEADKAR---------DDVDKGLEDLSKKA 282

BLAST of Lsi02G007640 vs. TAIR 10
Match: AT5G44310.2 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 98.2 bits (243), Expect = 9.4e-21
Identity = 75/178 (42.13%), Postives = 108/178 (60.67%), Query Frame = 0

Query: 55  VDANRDSRADYAYEDAKERAKEGAQEMKEKAKDYAKGTKDMAAEETNKASETARAAKEKV 114
           V+      AD AYE  KE+AK+ A ++KEK KD+A+ TK+   E  ++A++ A   KEK 
Sbjct: 155 VNEGASRAADKAYE-TKEKAKDKAYDVKEKTKDFAEETKEKVNEGASRAADKAYDVKEKT 214

Query: 115 KDYAYDTKEKAKEGTNRAAERAEEVTERAKEGAKGMKEKTEEMAKEGTKKATETVQSIGE 174
           K+YA  TK+K  EG +RAA++AEE  ++AK+ A+  KEK E+MA    +KA    Q IGE
Sbjct: 215 KNYAEQTKDKVNEGASRAADKAEETKDKAKDYAEDSKEKAEDMAHGFKEKA----QDIGE 274

Query: 175 KAKETVQGAWEAAKDTTNKIKEKVMGSEEEGEEGRRRDREEGGGKVMDEDVVDLRRKA 233
           K  +TV+  WE AK T  K+ E V+GS EE ++ R           +D+ + DL +KA
Sbjct: 275 KTMDTVKDVWETAKSTAQKVTEAVVGSGEEADKAR---------DDVDKGLEDLSKKA 318

BLAST of Lsi02G007640 vs. TAIR 10
Match: AT4G21020.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 97.8 bits (242), Expect = 1.2e-20
Identity = 94/252 (37.30%), Postives = 132/252 (52.38%), Query Frame = 0

Query: 18  SKAFPNASPPS--LKHSTKISSLSFSTFASKHPSWDGNGVDANRDSRADYAY-------- 77
           SKAFP    P+     S K+S + F+T  S++   D   +D  RDSRAD AY        
Sbjct: 15  SKAFPGIKAPATLAASSRKVSRICFATSVSQNEGRD--PLDNARDSRADSAYGSKKWRED 74

Query: 78  ------EDAKERAKEGAQEMKEKAKDYAKGTKDMAAEETNKASETARAAKEKVKDYAYDT 137
                 + AK++A EGA +  +KA +  +  KD A E   KA +TA  AKEK KDYA  T
Sbjct: 75  TGEYYAQAAKDKANEGASKAADKAYETKEQAKDKAYETKEKAKDTAYNAKEKAKDYAERT 134

Query: 138 KEKAKEGTNRAAERAEEVTER-----------AKEGAKGMKEKTEEMAKEGTKKA---TE 197
           K+K  EG  +AA++AE+  E+           AKE A+  KEK +E  ++  +KA    E
Sbjct: 135 KDKVNEGAYKAADKAEDTKEKAKDYAEDTMDNAKEKARHAKEKVKEYGEDTKEKAEGFKE 194

Query: 198 TV----QSIGEKAKETVQGAWEAAKDTTNKIKEKVMGSEEEGEEGRRRDREEGGGKVMDE 236
           TV    + +GEK KETV+GAWE+ K+    + E V+G EE+ E+ R           M++
Sbjct: 195 TVKGKAEELGEKTKETVKGAWESTKNAAQTVTEAVVGPEEDAEKARAD---------MNK 254

BLAST of Lsi02G007640 vs. TAIR 10
Match: AT2G36640.1 (embryonic cell protein 63 )

HSP 1 Score: 45.4 bits (106), Expect = 7.2e-05
Identity = 53/134 (39.55%), Postives = 64/134 (47.76%), Query Frame = 0

Query: 69  DAKERAKEGAQEMKEKAKDYAKGTKDMAAEETNKASETARAAKEKVKDYAYDTKEKAKEG 128
           +A E  KEGAQ   EK    A G KD   E   KA ETA    EKV +Y   T +KAKE 
Sbjct: 79  EAAESTKEGAQIASEK----AVGAKDATVE---KAKETADYTAEKVGEYKDYTVDKAKEA 138

Query: 129 TNRAAERAEEVTERAKEGAKGMKEKTEEMAKE----GTKKATETVQSIGEKAKETVQGAW 188
            +  AE+A+E      + A   K+KT E   E       KA E      EKAKET     
Sbjct: 139 KDTTAEKAKETANYTADKAVEAKDKTAEKIGEYKDYAVDKAVEAKDKTAEKAKETANYTA 198

Query: 189 EAAKDTTNKIKEKV 199
           + AK+  +K  EKV
Sbjct: 199 DKAKEAKDKTAEKV 205

BLAST of Lsi02G007640 vs. TAIR 10
Match: AT3G15670.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 44.7 bits (104), Expect = 1.2e-04
Identity = 42/135 (31.11%), Postives = 74/135 (54.81%), Query Frame = 0

Query: 98  EETNKASETARAAKEKVKDYAYDTKEKAKEGTNRAAERAEEVTERAKEGAKGMKEKTEEM 157
           +++ KA ET   A+EK        ++KA+EG ++ ++ A+   ++A E A+  K+KT + 
Sbjct: 5   QQSYKAGETRGKAQEKTGQAMGTMRDKAEEGRDKTSQTAQTAQQKAHETAQSAKDKTSQT 64

Query: 158 AKEGTKKATETVQSIGEKAKETVQGAWEAAKDTTNKIKEKVMGSEEEGEEGRRRDREEGG 217
           A+   +KA ET QS  EK  +T Q A + A +TT   KEK   + + G+  + R+ ++  
Sbjct: 65  AQAAQQKAHETAQSAKEKTSQTAQTAQQKAHETTQAAKEK---TSQAGD--KAREAKDKA 124

Query: 218 GKVMDEDVVDLRRKA 233
           G  + E    ++ KA
Sbjct: 125 GSYLSETGEAIKNKA 134

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
O498176.4e-0635.71Late embryogenesis abundant protein 2 OS=Cicer arietinum OX=3827 PE=2 SV=1[more]
P232831.1e-0530.77Desiccation-related protein PCC3-06 OS=Craterostigma plantagineum OX=4153 PE=2 S... [more]
O498161.1e-0535.11Late embryogenesis abundant protein 1 OS=Cicer arietinum OX=3827 PE=2 SV=1[more]
Q039683.2e-0534.53Late embryogenesis abundant protein, group 3 OS=Triticum aestivum OX=4565 PE=2 S... [more]
Match NameE-valueIdentityDescription
A0A0A0LRY01.3e-8375.98Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G074950 PE=4 SV=1[more]
A0A5D3DRU43.0e-8379.75ABA-inducible protein PHV A1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A1S3B5V33.0e-8379.75ABA-inducible protein PHV A1-like OS=Cucumis melo OX=3656 GN=LOC103486504 PE=4 S... [more]
A0A6J1K2X87.9e-7674.90late embryogenesis abundant protein, group 3-like OS=Cucurbita maxima OX=3661 GN... [more]
A0A6J1GR505.7e-7472.80late embryogenesis abundant protein, group 3 isoform X1 OS=Cucurbita moschata OX... [more]
Match NameE-valueIdentityDescription
XP_038876990.13.3e-9286.01late embryogenesis abundant protein 1-like [Benincasa hispida][more]
XP_004146655.22.8e-8375.98late embryogenesis abundant protein, group 3 [Cucumis sativus] >KAE8652720.1 hyp... [more]
XP_008442715.16.2e-8379.75PREDICTED: ABA-inducible protein PHV A1-like [Cucumis melo] >KAA0057000.1 ABA-in... [more]
XP_023542553.14.9e-8076.15late embryogenesis abundant protein, group 3 [Cucurbita pepo subsp. pepo][more]
KAG6573277.13.9e-7774.90hypothetical protein SDJN03_27164, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
AT5G44310.19.4e-2142.13Late embryogenesis abundant protein (LEA) family protein [more]
AT5G44310.29.4e-2142.13Late embryogenesis abundant protein (LEA) family protein [more]
AT4G21020.11.2e-2037.30Late embryogenesis abundant protein (LEA) family protein [more]
AT2G36640.17.2e-0539.55embryonic cell protein 63 [more]
AT3G15670.11.2e-0431.11Late embryogenesis abundant protein (LEA) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 133..153
NoneNo IPR availableCOILSCoilCoilcoord: 67..87
NoneNo IPR availableGENE3D1.10.287.700Helix hairpin bincoord: 60..140
e-value: 1.8E-5
score: 27.2
NoneNo IPR availableGENE3D1.10.287.700Helix hairpin bincoord: 141..208
e-value: 1.8E-5
score: 27.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..238
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 189..238
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..163
NoneNo IPR availablePANTHERPTHR47372:SF27SUBFAMILY NOT NAMEDcoord: 7..237
NoneNo IPR availablePANTHERPTHR47372DAUER UP-REGULATED-RELATEDcoord: 7..237

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi02G007640.1Lsi02G007640.1mRNA