
Lsi02G007090 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTATGTATTTATAAACTTCACCATTGATGTGCAAACATTTTCTGTAGCTTATCAAAATGAGAAAAATAATGTGGCTGTCTAAATTTTTGGTTTTGCTTAGTTTTATTGCTTTTCTAGCCCTGCATTGTGCTCAAGGATGGAGCAAAGAAGGTCATGTCCTAACATGTCAAATTGCACAGGTAATTTACTTTTTGACTTTTTAATCAAGTTTTATCTTTATCTATTGAATTATGTTCATATTTGTTAATTTTTCTCTCTTTAAACTTTAAAACAATTTATTATAAAGTGATCATTTTTACTTCTAAATTTGACAAAGTGTTGCAATTTTGTGAATTTTGGATGATTTGTTAGCTCAATTTTACTTTTCCTTGAAAGTAGTGAATGTTAAAAGATTTTTACTCAGCTTTTATATATTTTCTATAATGTTAAAATTGGTAAAGAAATTTTGGGGGAAAAAAATTACACAAAAAGTACTTAAATTTGAGACATTTAAATGATGTTCAAATGTTTAAAACAATCAACTGACAATTAATATATGCTAACGAGGATAATTAATTTTTTTAATTAAAAAAACAGGTTATAAATGGATATTTCCTTAAATTTAATTTAGTTGAATAATCATATGGTATGTATTTGAAATACACAGGAGCTCCTGAATCCAGAGGCAGCAGAGGCCGTTCAAGATCTGTTACCTGAAAGTGCCGGCGGAAATTTATCGGCGTTGTGTGTATGGCCGGACCAAATCCGACTTTTGTCTAGGTATCGGTGGGCCAGTCCCCTTCACTACGCCAACACGCCCGACACATGTTCTTTCCTCTACAAAAGTAACTTTTATTTTATTTTATTTTATTTTTATCATCTCAATGCAAATAAATAAGGTTAAATTATCTTAATTGTTTTGTATCTTGATTATTAAATTAAACGCTGCGATTTGTTTAGGGGATTGCCATAACACCGCCGGTGAGGATGACATGTGCGTCGTCGGTGCCATTCGTAATTTCACCACTCAGCTCATGACCTACCGAACCGAAGGTTCCGACAGCCCATGTAAGTGACCCGACCCAACTCGAATACGAGTATTATTATGATACTATTTTGGTTTTTAAATTTTAGGTTTAATTTCTATTTAGTCCATAAGTTTCAAAATATGTCCTACTTTAGTTTTTTAAGTTTTGAACTTGATTTCAATTTAGTCCATACAGAGTGTTTGGGCCACCAACTTGAAGTTGGTAGAGCCCACTCTATGTTTGGAGTTCCAATTATCATAATTATTGTTTCAGATTATTATAACCTACAATTAAGTATTACTATTTCAAATCTTTATTTGCTATAGTGGTACTATTTGCTACAATGTTTATTGTTCCCTACTTTTCTCCCTTTTAGAGTGTTTACTATTTTATATCTAAATTAAAATAGTTTATACCCTAAATACAAATTATTATAAATTTACTGACTATCATAACACACATACTATAATAACTAATTCAGTGCCTCAAACGCCTCATAAGTTTCAAAATGTTATAATTTTATCTTCTAAATTTGAGTTTTAGTCTCAAGTTTCAAAATTTACACTTTAACCTCAATTTTTTCATTAACATTGGTATCTATTAATTAATTTAAGATAATTATGAAGTAAATTTTTTTAATTTAATATTAATAGTAATGAAAAATAGTGAAACTTAATTAATTATATACTTTTTAATTCTTTTAAATTAATTCATAGACATTAATACTAAAAAAAATACAAGGCAGTATTTTGAAACTAGACCCGGATCAAAAGTGTATTTTCTCCCATTATTTAATTATTATTTTGGGTTCTGGAAATTATTTGTTCTGAAGACGGCGATTTCCTTTTTATTTGTTTTGTAGATAACTTGACCGAGGCGTTGCTGTTTCTATCGCATTTCGCTGGGGATATTCATCAGGTAAACTAAATTTAATTATCGAAAAATGTTAATTTGAATTGCTTTAATTTATTGCTCGAGGCGTTAATTATTGTTAATTTTAATTGTTTTAATTGATTATGAGAATCTAATTATAAATTACCCGGTGGCCGATGGTTTATTTTTATTTCAGCCATTGCACGTGGGGTTCGCGAGCGACGAGGGAGGGAACACCATAGAATTACGGTGGTACCGCCACAAGTCCAACCTCCATCACGTAAGACCTTAATCTAAAAACATTTTTTAAAAAAAAAATCTTTAAAAAGTCAATGAAATTCATGTTAAATTAAAATAAATAATAATAATATCAAGTTGGATCCTTGCAATGACAGGTATTTTAGTTTTAAAAAGTTTCAATTTTTTGACCCATAATTTTTTTTAATTTTTTTAATCTATTAAACTTTAAAAAATGTTTAATAAAACACAATATTTTGTGGTTATTAAATATTTTTTAAATTTTAGAATTCTTATCATAATTTAATAAAAGAAAAAAGATATAAATTATGCAGGTGTGGGATAGGGATATTATTCTTACAGCTCTGGCAAATTATTACGACAAGGACTCTGGCCTCCTCCTAGAAGAACTTCAAAGGAATTTGACTCATGTAATTAGAATACCTATTTTTCATTAATTACGATAAAAATAGTTTATAACTTTATTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAGACAATATCTCGTTGATTGAGGGCTTGACAACATGTTATTAAAAAATTTATTTATTTTAATAGCAACTTATTGATCTTATAATTTGGTAATAATTTAATTTTTAGTTTTTAGTTTTTAAAAATTAGTTTTTAAAAATTAAGCCTATAAATATCTCTTCCGCTTCTAAATTTATTGTTTTGTCGCCATCTACTTTTTACTAAATGTTTTTAAAAAGCCAAGCTAAAATTTGAAAATTAAAAAAAAATAGATTTTAAGAATTTGTTTGTATTTTTAGAATTTGCCTAATAGTTCAATTCTTGTAGTTAAGAAAGATGCAAATCATTGTATAAAATTGAGAGTAAATAGACTTAATTTTTAAAAAATAAAAAATAATTTTTTTAATTTTTTTTTTTATTAACGGTGTTTATTTAATAACATTTTTGTTGTTTTCTGCATCATTTTTACGTTTCGGAAATTTTGGCTGAAATTTTAAAAGTATTTTATAAAAATAAAAAGCATATATGCAAAAATAAATATTATAAGTTTTTTTCTTCTTCTTTAAGGCACTATTAGAAATAATTAAAGGTTTCATTTGATAATCTATTTTCACCCCTAATTAATCATTGAATTTGGGTGGGTAATTAATCAGAAGATAATGAAAGCTCTAATTAATATGTGATGTGCCCGCAGAGGATTACTTCGATTCAAGGTTGCCAATTGTGTTGGAACGATTAGCTCAAGGTGGGGTCCGGTTGGCCATGCTTTTGAACCGGGTTTTTTCCGAAGATGCTACAGGAGGATTTGCCTCCTCAACTTGATTAATATTTAATAGGACCAACACATTTAGTTTTTTTTTTTTCTTTTTTAAAAAATTTCAACTCACACTAAAAAAAACCTTTGGATTGTAAGTGTATCAATTAACACTCCTTGAGACTTAGCTTAAAATATATAATTGTTTTACTTAGACTTCTAAATTGTTATAAGTGAATTAATTTAGATCATTTAATAATATTACATTTGAAAATTGTCAAAGCATTCAATTCTTACATGTATGTAGATTTCTTCAAATGTCGGATTAATAAAATGGACGATTATAATTGATA ATGTATCCCTGCATTGTGCTCAAGGATGGAGCAAAGAAGGAGCTCCTGAATCCAGAGGCAGCAGAGGCCGTTCAAGATCTGTTACCTGAAAGTGCCGGCGGAAATTTATCGGCGTTGTGTGTATGGCCGGACCAAATCCGACTTTTGTCTAGGTATCGGTGGGCCAGTCCCCTTCACTACGCCAACACGCCCGACACATGTTCTTTCCTCTACAAAAGGGATTGCCATAACACCGCCGGTGAGGATGACATGTGCGTCGTCGGTGCCATTCGTAATTTCACCACTCAGCTCATGACCTACCGAACCGAAGATAACTTGACCGAGGCGTTGCTGTTTCTATCGCATTTCGCTGGGGATATTCATCAGAATCTAATTATAAATTACCCGGTGGCCGATGGTTTATTTTTATTTCAGCCATTGCACGTGGGGTTCGCGAGCGACGAGGGAGGGAACACCATAGAATTACGGTGGTACCGCCACAAGTCCAACCTCCATCACGTGTGGGATAGGGATATTATTCTTACAGCTCTGGCAAATTATTACGACAAGGACTCTGGCCTCCTCCTAGAAGAACTTCAAAGGAATTTGACTCATGCACTATTAGAAATAATTAAAGAGGATTACTTCGATTCAAGGTTGCCAATTGTGTTGGAACGATTAGCTCAAGGTGGGGTCCGGTTGGCCATGCTTTTGAACCGGGTTTTTTCCGAAGATGCTACAGGAGGATTTGCCTCCTCAACTTGATTAATATTTAATAGGACCAACACATTTAGTTTTTTTTTTTTCTTTTTTAAAAAATTTCAACTCACACTAAAAAAAACCTTTGGATTGTAAGTGTATCAATTAACACTCCTTGAGACTTAGCTTAAAATATATAATTGTTTTACTTAGACTTCTAAATTGTTATAAGTGAATTAATTTAGATCATTTAATAATATTACATTTGAAAATTGTCAAAGCATTCAATTCTTACATGTATGTAGATTTCTTCAAATGTCGGATTAATAAAATGGACGATTATAATTGATA ATGTATCCCTGCATTGTGCTCAAGGATGGAGCAAAGAAGGAGCTCCTGAATCCAGAGGCAGCAGAGGCCGTTCAAGATCTGTTACCTGAAAGTGCCGGCGGAAATTTATCGGCGTTGTGTGTATGGCCGGACCAAATCCGACTTTTGTCTAGGTATCGGTGGGCCAGTCCCCTTCACTACGCCAACACGCCCGACACATGTTCTTTCCTCTACAAAAGGGATTGCCATAACACCGCCGGTGAGGATGACATGTGCGTCGTCGGTGCCATTCGTAATTTCACCACTCAGCTCATGACCTACCGAACCGAAGATAACTTGACCGAGGCGTTGCTGTTTCTATCGCATTTCGCTGGGGATATTCATCAGAATCTAATTATAAATTACCCGGTGGCCGATGGTTTATTTTTATTTCAGCCATTGCACGTGGGGTTCGCGAGCGACGAGGGAGGGAACACCATAGAATTACGGTGGTACCGCCACAAGTCCAACCTCCATCACGTGTGGGATAGGGATATTATTCTTACAGCTCTGGCAAATTATTACGACAAGGACTCTGGCCTCCTCCTAGAAGAACTTCAAAGGAATTTGACTCATGCACTATTAGAAATAATTAAAGAGGATTACTTCGATTCAAGGTTGCCAATTGTGTTGGAACGATTAGCTCAAGGTGGGGTCCGGTTGGCCATGCTTTTGAACCGGGTTTTTTCCGAAGATGCTACAGGAGGATTTGCCTCCTCAACTTGA MYPCIVLKDGAKKELLNPEAAEAVQDLLPESAGGNLSALCVWPDQIRLLSRYRWASPLHYANTPDTCSFLYKRDCHNTAGEDDMCVVGAIRNFTTQLMTYRTEDNLTEALLFLSHFAGDIHQNLIINYPVADGLFLFQPLHVGFASDEGGNTIELRWYRHKSNLHHVWDRDIILTALANYYDKDSGLLLEELQRNLTHALLEIIKEDYFDSRLPIVLERLAQGGVRLAMLLNRVFSEDATGGFASST Homology
BLAST of Lsi02G007090 vs. ExPASy Swiss-Prot
Match: Q9SXA6 (Endonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=ENDO1 PE=1 SV=1) HSP 1 Score: 259.2 bits (661), Expect = 4.7e-68 Identity = 141/280 (50.36%), Postives = 174/280 (62.14%), Query Frame = 0
BLAST of Lsi02G007090 vs. ExPASy Swiss-Prot
Match: Q9C9G4 (Endonuclease 2 OS=Arabidopsis thaliana OX=3702 GN=ENDO2 PE=1 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 1.1e-58 Identity = 120/264 (45.45%), Postives = 160/264 (60.61%), Query Frame = 0
BLAST of Lsi02G007090 vs. ExPASy Swiss-Prot
Match: F4JJL0 (Endonuclease 4 OS=Arabidopsis thaliana OX=3702 GN=ENDO4 PE=1 SV=1) HSP 1 Score: 220.3 bits (560), Expect = 2.4e-56 Identity = 123/264 (46.59%), Postives = 152/264 (57.58%), Query Frame = 0
BLAST of Lsi02G007090 vs. ExPASy Swiss-Prot
Match: F4JJL3 (Endonuclease 5 OS=Arabidopsis thaliana OX=3702 GN=ENDO5 PE=1 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 6.3e-49 Identity = 110/261 (42.15%), Postives = 140/261 (53.64%), Query Frame = 0
BLAST of Lsi02G007090 vs. ExPASy Swiss-Prot
Match: Q8LDW6 (Endonuclease 3 OS=Arabidopsis thaliana OX=3702 GN=ENDO3 PE=1 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 3.2e-45 Identity = 106/260 (40.77%), Postives = 136/260 (52.31%), Query Frame = 0
BLAST of Lsi02G007090 vs. ExPASy TrEMBL
Match: A0A5D3DSP7 (Aspergillus nuclease S(1) OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00370 PE=3 SV=1) HSP 1 Score: 359.4 bits (921), Expect = 1.2e-95 Identity = 186/279 (66.67%), Postives = 201/279 (72.04%), Query Frame = 0
BLAST of Lsi02G007090 vs. ExPASy TrEMBL
Match: A0A1S3B4B0 (Aspergillus nuclease S(1) OS=Cucumis melo OX=3656 GN=LOC103486022 PE=3 SV=1) HSP 1 Score: 359.4 bits (921), Expect = 1.2e-95 Identity = 186/279 (66.67%), Postives = 201/279 (72.04%), Query Frame = 0
BLAST of Lsi02G007090 vs. ExPASy TrEMBL
Match: C3VEY2 (Aspergillus nuclease S(1) OS=Cucumis sativus OX=3659 PE=2 SV=2) HSP 1 Score: 345.1 bits (884), Expect = 2.4e-91 Identity = 178/279 (63.80%), Postives = 196/279 (70.25%), Query Frame = 0
BLAST of Lsi02G007090 vs. ExPASy TrEMBL
Match: A0A6J1KL07 (Aspergillus nuclease S(1) OS=Cucurbita maxima OX=3661 GN=LOC111495151 PE=3 SV=1) HSP 1 Score: 336.7 bits (862), Expect = 8.5e-89 Identity = 176/279 (63.08%), Postives = 193/279 (69.18%), Query Frame = 0
BLAST of Lsi02G007090 vs. ExPASy TrEMBL
Match: A0A6J1ENU3 (Aspergillus nuclease S(1) OS=Cucurbita moschata OX=3662 GN=LOC111434241 PE=3 SV=1) HSP 1 Score: 334.0 bits (855), Expect = 5.5e-88 Identity = 175/279 (62.72%), Postives = 192/279 (68.82%), Query Frame = 0
BLAST of Lsi02G007090 vs. NCBI nr
Match: XP_008442043.1 (PREDICTED: endonuclease 1 [Cucumis melo] >KAA0056948.1 endonuclease 1 [Cucumis melo var. makuwa] >TYK26375.1 endonuclease 1 [Cucumis melo var. makuwa]) HSP 1 Score: 359.4 bits (921), Expect = 2.5e-95 Identity = 186/279 (66.67%), Postives = 201/279 (72.04%), Query Frame = 0
BLAST of Lsi02G007090 vs. NCBI nr
Match: NP_001292654.1 (endonuclease 1 precursor [Cucumis sativus] >ACO72982.2 bifunctional nuclease precursor [Cucumis sativus] >KAE8652702.1 hypothetical protein Csa_013303 [Cucumis sativus]) HSP 1 Score: 345.1 bits (884), Expect = 4.9e-91 Identity = 178/279 (63.80%), Postives = 196/279 (70.25%), Query Frame = 0
BLAST of Lsi02G007090 vs. NCBI nr
Match: XP_023000814.1 (endonuclease 1 [Cucurbita maxima]) HSP 1 Score: 336.7 bits (862), Expect = 1.7e-88 Identity = 176/279 (63.08%), Postives = 193/279 (69.18%), Query Frame = 0
BLAST of Lsi02G007090 vs. NCBI nr
Match: XP_023519979.1 (endonuclease 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 334.0 bits (855), Expect = 1.1e-87 Identity = 175/279 (62.72%), Postives = 192/279 (68.82%), Query Frame = 0
BLAST of Lsi02G007090 vs. NCBI nr
Match: XP_022927405.1 (endonuclease 1 [Cucurbita moschata]) HSP 1 Score: 334.0 bits (855), Expect = 1.1e-87 Identity = 175/279 (62.72%), Postives = 192/279 (68.82%), Query Frame = 0
BLAST of Lsi02G007090 vs. TAIR 10
Match: AT1G11190.1 (bifunctional nuclease i ) HSP 1 Score: 259.2 bits (661), Expect = 3.3e-69 Identity = 141/280 (50.36%), Postives = 174/280 (62.14%), Query Frame = 0
BLAST of Lsi02G007090 vs. TAIR 10
Match: AT1G68290.1 (endonuclease 2 ) HSP 1 Score: 228.0 bits (580), Expect = 8.2e-60 Identity = 120/264 (45.45%), Postives = 160/264 (60.61%), Query Frame = 0
BLAST of Lsi02G007090 vs. TAIR 10
Match: AT4G21585.1 (endonuclease 4 ) HSP 1 Score: 220.3 bits (560), Expect = 1.7e-57 Identity = 123/264 (46.59%), Postives = 152/264 (57.58%), Query Frame = 0
BLAST of Lsi02G007090 vs. TAIR 10
Match: AT4G21600.1 (endonuclease 5 ) HSP 1 Score: 195.7 bits (496), Expect = 4.5e-50 Identity = 110/261 (42.15%), Postives = 140/261 (53.64%), Query Frame = 0
BLAST of Lsi02G007090 vs. TAIR 10
Match: AT4G21590.1 (endonuclease 3 ) HSP 1 Score: 183.3 bits (464), Expect = 2.3e-46 Identity = 106/260 (40.77%), Postives = 136/260 (52.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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