
Lsi02G006640 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAACAGTTAGTTCTGGAGTACATGTTGTTTTAAGCACACGTCTTCTTTCTATTAGGCCAAGGAATAAACAACAAAACTGTCCAACTTTTGAATACAAACCCAGGCATTGTATCTTCCACTGCATCAATACTACGACTTAGTGACGATTTGGGAAGTGCAAAGGTAACATATTTAGATATGTTTGAAATGATTTTCTAAGTGCTTAAAAAAGTGTTTTCTAATTTTTCAAAAAATTTTTCCTTACAGGATGAGAATCAAGAAGGATATGATGGGTCGTATATAGAATACTACACGAAGGAAAATCTGGAGATTTCTGTTGATAGCGCACGGCAGCGCGTTATCCACATGATCTCAGATGCATGGAAGAGATTGAACCGAGAAAGCCAATCTCGAAATCCATTTCCAGCAACATTTATACAAGCTTCTCAAAATATTGCTAGATTTGTTCCTCTTTTATATGGTTATGATGAAAATCAAAACCTTCCAACTCTCGAGAAGCTTGTGAAATCTATGCTCTATGAAAGCGTACAAATTTAA ATGGAACACGCACGGCAGCGCGTTATCCACATGATCTCAGATGCATGGAAGAGATTGAACCGAGAAAGCCAATCTCGAAATCCATTTCCAGCAACATTTATACAAGCTTCTCAAAATATTGCTAGATTTGTTCCTCTTTTATATGGTTATGATGAAAATCAAAACCTTCCAACTCTCGAGAAGCTTGTGAAATCTATGCTCTATGAAAGCGTACAAATTTAA ATGGAACACGCACGGCAGCGCGTTATCCACATGATCTCAGATGCATGGAAGAGATTGAACCGAGAAAGCCAATCTCGAAATCCATTTCCAGCAACATTTATACAAGCTTCTCAAAATATTGCTAGATTTGTTCCTCTTTTATATGGTTATGATGAAAATCAAAACCTTCCAACTCTCGAGAAGCTTGTGAAATCTATGCTCTATGAAAGCGTACAAATTTAA MEHARQRVIHMISDAWKRLNRESQSRNPFPATFIQASQNIARFVPLLYGYDENQNLPTLEKLVKSMLYESVQI Homology
BLAST of Lsi02G006640 vs. ExPASy Swiss-Prot
Match: P0CV96 ((3S,6E)-nerolidol synthase 1, chloroplastic OS=Fragaria vesca OX=57918 PE=1 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 4.5e-19 Identity = 43/73 (58.90%), Postives = 58/73 (79.45%), Query Frame = 0
BLAST of Lsi02G006640 vs. ExPASy Swiss-Prot
Match: P0CV94 ((3S,6E)-nerolidol synthase 1 OS=Fragaria ananassa OX=3747 PE=1 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 6.5e-18 Identity = 42/73 (57.53%), Postives = 57/73 (78.08%), Query Frame = 0
BLAST of Lsi02G006640 vs. ExPASy Swiss-Prot
Match: P0CV95 ((3S,6E)-nerolidol synthase 2, chloroplastic/mitochondrial OS=Fragaria ananassa OX=3747 PE=1 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 1.1e-17 Identity = 42/73 (57.53%), Postives = 56/73 (76.71%), Query Frame = 0
BLAST of Lsi02G006640 vs. ExPASy Swiss-Prot
Match: B9RHX7 (Probable terpene synthase 4 OS=Ricinus communis OX=3988 GN=TPS4 PE=3 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 2.3e-15 Identity = 39/70 (55.71%), Postives = 51/70 (72.86%), Query Frame = 0
BLAST of Lsi02G006640 vs. ExPASy Swiss-Prot
Match: B9RXW4 (Probable terpene synthase 13 OS=Ricinus communis OX=3988 GN=TPS13 PE=3 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 2.5e-14 Identity = 38/73 (52.05%), Postives = 50/73 (68.49%), Query Frame = 0
BLAST of Lsi02G006640 vs. ExPASy TrEMBL
Match: A0A5D3BHX5 ((3S,6E)-nerolidol synthase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G006280 PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 2.8e-24 Identity = 60/74 (81.08%), Postives = 67/74 (90.54%), Query Frame = 0
BLAST of Lsi02G006640 vs. ExPASy TrEMBL
Match: A0A5A7UQJ6 ((3S,6E)-nerolidol synthase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G00760 PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 2.8e-24 Identity = 60/74 (81.08%), Postives = 67/74 (90.54%), Query Frame = 0
BLAST of Lsi02G006640 vs. ExPASy TrEMBL
Match: A0A1S4DSD7 ((3S,6E)-nerolidol synthase 1-like OS=Cucumis melo OX=3656 GN=LOC103485748 PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 2.8e-24 Identity = 60/74 (81.08%), Postives = 67/74 (90.54%), Query Frame = 0
BLAST of Lsi02G006640 vs. ExPASy TrEMBL
Match: A0A6J1CEA4 ((3S,6E)-nerolidol synthase 1-like OS=Momordica charantia OX=3673 GN=LOC111010875 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 4.8e-24 Identity = 59/73 (80.82%), Postives = 64/73 (87.67%), Query Frame = 0
BLAST of Lsi02G006640 vs. ExPASy TrEMBL
Match: A0A0A0LX78 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G066550 PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 1.4e-23 Identity = 59/74 (79.73%), Postives = 67/74 (90.54%), Query Frame = 0
BLAST of Lsi02G006640 vs. NCBI nr
Match: XP_038893851.1 (LOW QUALITY PROTEIN: (3S,6E)-nerolidol synthase 1-like [Benincasa hispida]) HSP 1 Score: 125.9 bits (315), Expect = 1.4e-25 Identity = 61/73 (83.56%), Postives = 67/73 (91.78%), Query Frame = 0
BLAST of Lsi02G006640 vs. NCBI nr
Match: KAA0056907.1 ((3S,6E)-nerolidol synthase 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 120.6 bits (301), Expect = 5.8e-24 Identity = 60/74 (81.08%), Postives = 67/74 (90.54%), Query Frame = 0
BLAST of Lsi02G006640 vs. NCBI nr
Match: TYJ99410.1 ((3S,6E)-nerolidol synthase 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 120.6 bits (301), Expect = 5.8e-24 Identity = 60/74 (81.08%), Postives = 67/74 (90.54%), Query Frame = 0
BLAST of Lsi02G006640 vs. NCBI nr
Match: XP_016898901.1 (PREDICTED: (3S,6E)-nerolidol synthase 1-like [Cucumis melo]) HSP 1 Score: 120.6 bits (301), Expect = 5.8e-24 Identity = 60/74 (81.08%), Postives = 67/74 (90.54%), Query Frame = 0
BLAST of Lsi02G006640 vs. NCBI nr
Match: XP_022140145.1 ((3S,6E)-nerolidol synthase 1-like [Momordica charantia]) HSP 1 Score: 119.8 bits (299), Expect = 9.9e-24 Identity = 59/73 (80.82%), Postives = 64/73 (87.67%), Query Frame = 0
BLAST of Lsi02G006640 vs. TAIR 10
Match: AT1G61680.1 (terpene synthase 14 ) HSP 1 Score: 62.8 bits (151), Expect = 1.3e-10 Identity = 32/67 (47.76%), Postives = 45/67 (67.16%), Query Frame = 0
BLAST of Lsi02G006640 vs. TAIR 10
Match: AT1G61680.2 (terpene synthase 14 ) HSP 1 Score: 62.8 bits (151), Expect = 1.3e-10 Identity = 32/67 (47.76%), Postives = 45/67 (67.16%), Query Frame = 0
BLAST of Lsi02G006640 vs. TAIR 10
Match: AT5G23960.1 (terpene synthase 21 ) HSP 1 Score: 41.6 bits (96), Expect = 3.2e-04 Identity = 23/73 (31.51%), Postives = 41/73 (56.16%), Query Frame = 0
BLAST of Lsi02G006640 vs. TAIR 10
Match: AT5G23960.2 (terpene synthase 21 ) HSP 1 Score: 41.6 bits (96), Expect = 3.2e-04 Identity = 23/73 (31.51%), Postives = 41/73 (56.16%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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