Lsi02G005300 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi02G005300
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Descriptionchromophore lyase CRL, chloroplastic
Locationchr02: 4598760 .. 4602745 (-)
RNA-Seq ExpressionLsi02G005300
SyntenyLsi02G005300
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTTAAAACTAAAAATGATAAATAAAAGAGTAAAATAGAAACTAAAAAAGTAATTTACAAGTACATTGAAGGTATTTTACATATTAGAGGATATTATGAATCTCCAATTACGAACAAAATTGAGGGGCACTCGTTTTCTGTGGCCACGGCCGTTCTTTGTGTATATATCGAGAGATTGAAGAGAAAGTTCTAAACAGAAGAGCCCGCCCTGATGTGCGACGCCCAAAATTTGGTATATGGGAAGTGGAGTAATGGGTTCTCTTCTATTTGACAGCTCTAATTGAACACGCACCTCCTAATTTCTCTCCATTTAGCCGTCTCGTCCAACTTTTCTCTGTGCGCCGATTCTCGGCTCTACTCTTTGAAACTCGATTTCGTGCTGCGAATGATTTGGGGAACCTGGAGAAGATTAGGGATGGTGGGTGTTTGAGGAGAGCTGAGGAAGCGAAGCTATGGGTACCGATTCCAATTCAAACAATGATAATAACAACTCAGTAGGATGGAACAGAGCTGGGGGTTTGATAATGAAGACTTTGGTACTGGTTGGAGGTGCCCTTTTGCTTAAACGCCTTACTAAGTCCACAACGCGATGGGATCATGCCCGCTTTGTTTCTCAGTCCCTTTCTGGCGAGAAGGTTTCTGTTTTCAACCTTCTTGTAAAACCCCAATTGCATTACACTCTTTTCCTTTCTGAATTTCTTGTTTTCTTGTTCTTTTTTGATAGTTTTCGAAGGAGCAAGCTGCTAGGGATCCTGACAATTACTTCAATATCAGGTACGTAATATGTGAATGTTGTTTAGTTGGTGTGAATTGTTCAATTTCTAGTCTTCTACTGAATGATGAACCCCCTTTTTTAATTCGATTTGAATAGGGCTTCATTGTCCCCTCTGTTTTGAATTGTACTTTGGATAAATTTATGGATGAGTAATTTTGATTCTTGTGTTTTAGAATGATTACGTGCCCTGCAGCAGAAATGGTCGATGGTTCTACGGTGTTATACTTCGAACAAGTGAGTCTAGCACTCTTTCTTGCTCGGTAATATTCCATTTAGCAGTTCTCTTTCCCTGATATCAGTCTTCATTTTGTTTTGTGCTTTGATAGGCTTTCTCCAGAACTCCTCAAAAACCCTTTCGCCAGGTATTGTTATTATCTCACTCTCTTCCCTTTGAAATTTGGAATTTATTAAGGAAAAGAAAGTTAACCATCGATGAACTCCTATGTTTAGTTTGCTGAGCTTTCCTTCATTATACCTATAATAATTCAATTAGTTCTACGGTTGCAGAGATTTTATACGGTGAAGCCTTGTTCAAAAGAGATGAAATGTGATGTGGAGGTGAGTGCATATGCTGTTTTGTAGTTGGTGTGAAGGGATGATATATATTCCTATGCTATAAATTGCTAATGGTCTATATGTGTATATGTGTTAGCATGGTTAGTTGCAGCATTTGCAGTGGTTTGCTTGTACTGTGTAACATGCATGCTGCAAAAGTTTCTTACATCTGTTCACTTTGCAGCTAAGCTCATATGCAATTCGGGAAATGGAGGAGTACAAGAATTTTTGTGATCGGACAAAAGACCAACGTCCTCTTCCCGAAGAAATTGCTGGGGTTAGCCATCCGTTTAAGACTTCCATCAGACTTTCTATTGCTCGAATATATCTATGCAGTTTAATTCAAAATATGTTATTTTAGCTTTTCAATTGTCCTACTCTTAGTCCCATTCCTGACCTACCTGATCTCTATTTAGTTGAGAATATATGGATCAGAGTTCTCTTAGAGCCACTTAAACTCAGAATAGTACCCGGCCTTAACCTGTCCAAATTTTAATGCCCAATATGATCAACTTTGTTTTTGGCCAGGGCCTCAAATCTATGTGCATGCATTAATTTTTCATTGTTGGATCAAGTAAAAACCTGAAGTTTGGTTATGAGCAGGGAACTAAACTTGAGTACAAGTGGGATTTTTCTAGTGAACTTAACATGGCTTCACAGTTAAGACTTGAGAGAATAAAAAATGTGAATATGGGCATGGATGTTGGACGACATTACCAAACCATCCACTGAAGAGAACAAAGTTTGGTCATAGTCTCTGTAAGGCAGCAGGTTGAACCATTGGAACTGTAGATTTGAATATATGGATATATGAGTTTAATGCTGATCGTAACTACTTGCTCTGGATTTTGAATTAGCGGTTTTTTTCTATCTTTTAATCAATTTAATGGCTCGGTCAAGTTCCTTTTCTTATAGTAAGTTCTAATGATACCCCATTAATGCATAGAATGAGTGGTTAGGTGATGAAATAAGACACTCAGATTAACTTAAAACAGGTCAACCTAAGTTACTGTACCATAGCGAATGGTTAAGATAAACATGGTTGTGAAAATGGTGAAGAAGCAGAAATTAGAGTTTTGATGCCTCCGAGGTTATCTATCTATTTTAGATCATTTATAGTGTGAACCATTTGACCTTTTGTTCACTCAATATCATCTTGCTTGGATCATAACCAGAGTTTTTTATAAATCGTTTACAAGGCTCTTTTCTATAGTTTTGTGGAGTTTATAAGATTGGTATGATTATTTTTACTGTAAGATGAAAACAAAATCGGTTCTTGGTTGTAAGGTATTCCATACAATACGTATTTTATCATTCTTTGGTTAAGTCTGTTCTTCACTGAAACTGACTTGGATATAGCTGAATGAATCTCATACAAGTCTAGATTTTTATGCACAGGACATTGCGGAGCATTTGACTACATTACATCTTAAGCGTTGTGATCGTGGAAAACGTTGCTTGTATGAAGGTTCAACTCCTCCTGGTGGTTTTCCAAATTCATGGGTAAGAGCATCTGTATATCTATATTCCGTCGTCATTCCACATAATTTGATTTTTTTTTCCTTGTCTGTGAGATTGTTAAGAGTAAAACTCAAAAGTTAGTTAGCCCTACTGCAATGTTCCAGTAATAAGTATTACTCCCTTCCTTTACCATTGGCCTTCCTTTTTTGACAGAATGGAGCAGCCTACTGTACTTCCGAAATTGCTATCCTAAAGAATAATGAAGTACATACCTGGGAAAGGGGTTACGATGAAGATGGAAACCAGGTTTAATCCGTTTTACATACTTTGTATTTCAATTTCACGAGGAAGGAGAAATGCTGTGAAGTGGTATCTGGGAGAGGGGGTGGGGGTGAACCTCAAATAAATTTAATGTATGATCTGCTGCTCATTACAGGTTTGGGGAACAAAAGAAGGACCTTACGAATTCAAGCCAGTTCCAGCCTCCAGTCTCAAGGACATGTTTTCTCCATTAAATTTCTCTCAGCAGTCCATGGAGAAAAGAATAGAGGGTTCATTTGTCTTGCAATAATAGTCACCTAATAATTTTTTCTTTTCTAATGTAAATTTCCATCACCTTTTCTATCTAAAATAAAATCTTACATTTGCTTTTCATGTTTTGTCTTTCTCTCCCGTTATTTCTTTGGTCAAATGTTTTCGTATGTGTATTATTACAGTCGAAAGCACCGGCCGAGTTCTTGAAAGCAACCAAAATGGCTGTCGACTGCTCACTCTAGTAGGCCTGCTCTCCAATGGACATATGACAAAGTTCAGTTCAGGGGAAACTACACAGTAACTGTACCTTCCTTTCTCATCTCAGATATATCGCCTGAAGATACAACCATAACTTAGCTTCCGATTTTCAAACATATTATGGCCAGAAATATTGAGGACTTTTGCAGGAGAGAGAGTGAATAAAGGTTAGGCTTATCAGGATAAATTTGAGCAATGTTCTTGTCCACCTCAGACATTACTTAGAATGACATTGGCTACAATTTCCAGTCTTTTCACCAACGGTGTGATGTAAGCTTTACGACATATAAGTTACATAATCTACTTTCTAGGCAAATACTCCTAAAAAGTGTATAATTCTTAATTTCTTTTTGCCTTGTATTATATATAATATAAAAATCCATAAGTTTGATGACCTTCCAA

mRNA sequence

AATTTAAAACTAAAAATGATAAATAAAAGAGTAAAATAGAAACTAAAAAAGTAATTTACAAGTACATTGAAGGTATTTTACATATTAGAGGATATTATGAATCTCCAATTACGAACAAAATTGAGGGGCACTCGTTTTCTGTGGCCACGGCCGTTCTTTGTGTATATATCGAGAGATTGAAGAGAAAGTTCTAAACAGAAGAGCCCGCCCTGATGTGCGACGCCCAAAATTTGGTATATGGGAAGTGGAGTAATGGGTTCTCTTCTATTTGACAGCTCTAATTGAACACGCACCTCCTAATTTCTCTCCATTTAGCCGTCTCGTCCAACTTTTCTCTGTGCGCCGATTCTCGGCTCTACTCTTTGAAACTCGATTTCGTGCTGCGAATGATTTGGGGAACCTGGAGAAGATTAGGGATGGTGGGTGTTTGAGGAGAGCTGAGGAAGCGAAGCTATGGGTACCGATTCCAATTCAAACAATGATAATAACAACTCAGTAGGATGGAACAGAGCTGGGGGTTTGATAATGAAGACTTTGGTACTGGTTGGAGGTGCCCTTTTGCTTAAACGCCTTACTAAGTCCACAACGCGATGGGATCATGCCCGCTTTGTTTCTCAGTCCCTTTCTGGCGAGAAGTTTTCGAAGGAGCAAGCTGCTAGGGATCCTGACAATTACTTCAATATCAGAATGATTACGTGCCCTGCAGCAGAAATGGTCGATGGTTCTACGGTGTTATACTTCGAACAAGCTTTCTCCAGAACTCCTCAAAAACCCTTTCGCCAGTTTGCTGAGCTTTCCTTCATTATACCTATAATAATTCAATTAGTTCTACGGTTGCAGAGATTTTATACGGTGAAGCCTTGTTCAAAAGAGATGAAATGTGATGTGGAGCTAAGCTCATATGCAATTCGGGAAATGGAGGAGTACAAGAATTTTTGTGATCGGACAAAAGACCAACGTCCTCTTCCCGAAGAAATTGCTGGGGACATTGCGGAGCATTTGACTACATTACATCTTAAGCGTTGTGATCGTGGAAAACGTTGCTTGTATGAAGGTTCAACTCCTCCTGGTGGTTTTCCAAATTCATGGAATGGAGCAGCCTACTGTACTTCCGAAATTGCTATCCTAAAGAATAATGAAGTACATACCTGGGAAAGGGGTTACGATGAAGATGGAAACCAGGTTTGGGGAACAAAAGAAGGACCTTACGAATTCAAGCCAGTTCCAGCCTCCAGTCTCAAGGACATGTTTTCTCCATTAAATTTCTCTCAGCAGTCCATGGAGAAAAGAATAGAGGGTTCATTTGTCTTGCAATAATAGTCACCTAATAATTTTTTCTTTTCTAATTCGAAAGCACCGGCCGAGTTCTTGAAAGCAACCAAAATGGCTGTCGACTGCTCACTCTAGTAGGCCTGCTCTCCAATGGACATATGACAAAGTTCAGTTCAGGGGAAACTACACAGTAACTGTACCTTCCTTTCTCATCTCAGATATATCGCCTGAAGATACAACCATAACTTAGCTTCCGATTTTCAAACATATTATGGCCAGAAATATTGAGGACTTTTGCAGGAGAGAGAGTGAATAAAGGTTAGGCTTATCAGGATAAATTTGAGCAATGTTCTTGTCCACCTCAGACATTACTTAGAATGACATTGGCTACAATTTCCAGTCTTTTCACCAACGGTGTGATGTAAGCTTTACGACATATAAGTTACATAATCTACTTTCTAGGCAAATACTCCTAAAAAGTGTATAATTCTTAATTTCTTTTTGCCTTGTATTATATATAATATAAAAATCCATAAGTTTGATGACCTTCCAA

Coding sequence (CDS)

ATGGGTACCGATTCCAATTCAAACAATGATAATAACAACTCAGTAGGATGGAACAGAGCTGGGGGTTTGATAATGAAGACTTTGGTACTGGTTGGAGGTGCCCTTTTGCTTAAACGCCTTACTAAGTCCACAACGCGATGGGATCATGCCCGCTTTGTTTCTCAGTCCCTTTCTGGCGAGAAGTTTTCGAAGGAGCAAGCTGCTAGGGATCCTGACAATTACTTCAATATCAGAATGATTACGTGCCCTGCAGCAGAAATGGTCGATGGTTCTACGGTGTTATACTTCGAACAAGCTTTCTCCAGAACTCCTCAAAAACCCTTTCGCCAGTTTGCTGAGCTTTCCTTCATTATACCTATAATAATTCAATTAGTTCTACGGTTGCAGAGATTTTATACGGTGAAGCCTTGTTCAAAAGAGATGAAATGTGATGTGGAGCTAAGCTCATATGCAATTCGGGAAATGGAGGAGTACAAGAATTTTTGTGATCGGACAAAAGACCAACGTCCTCTTCCCGAAGAAATTGCTGGGGACATTGCGGAGCATTTGACTACATTACATCTTAAGCGTTGTGATCGTGGAAAACGTTGCTTGTATGAAGGTTCAACTCCTCCTGGTGGTTTTCCAAATTCATGGAATGGAGCAGCCTACTGTACTTCCGAAATTGCTATCCTAAAGAATAATGAAGTACATACCTGGGAAAGGGGTTACGATGAAGATGGAAACCAGGTTTGGGGAACAAAAGAAGGACCTTACGAATTCAAGCCAGTTCCAGCCTCCAGTCTCAAGGACATGTTTTCTCCATTAAATTTCTCTCAGCAGTCCATGGAGAAAAGAATAGAGGGTTCATTTGTCTTGCAATAA

Protein sequence

MGTDSNSNNDNNNSVGWNRAGGLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGEKFSKEQAARDPDNYFNIRMITCPAAEMVDGSTVLYFEQAFSRTPQKPFRQFAELSFIIPIIIQLVLRLQRFYTVKPCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIAGDIAEHLTTLHLKRCDRGKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYDEDGNQVWGTKEGPYEFKPVPASSLKDMFSPLNFSQQSMEKRIEGSFVLQ
Homology
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BLAST of Lsi02G005300 vs. ExPASy Swiss-Prot
Match: Q9FI46 (Chromophore lyase CRL, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRL PE=1 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 3.2e-113
Identity = 196/288 (68.06%), Postives = 235/288 (81.60%), Query Frame = 0 

Query: 1   MGTDSNSNNDNNNSVGWNRAGGLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGE 60
           MGT+S S+ +++++ GW+RA GL++KTLVL+GGALL+KRLTKSTTR DHAR VS+SL+GE
Sbjct: 1   MGTESGSDPESSSN-GWSRARGLVVKTLVLIGGALLIKRLTKSTTRRDHARVVSRSLTGE 60

Query: 61  KFSKEQAARDPDNYFNIRMITCPAAEMVDGSTVLYFEQAFSRTPQKPFRQFAELSFIIPI 120
           KF++EQA+RDPDNYFNIRM++CPAAEMVDGS VLY EQAF RTPQKPFR           
Sbjct: 61  KFTREQASRDPDNYFNIRMLSCPAAEMVDGSEVLYLEQAFWRTPQKPFR----------- 120

Query: 121 IIQLVLRLQRFYTVKPCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIAGDIA 180
                   QR Y VKPC KE+KCDVE+SSYAIR+ EEYKNFCDR KDQRPLPEE+ GDI 
Sbjct: 121 --------QRLYMVKPCPKELKCDVEVSSYAIRDAEEYKNFCDRPKDQRPLPEEVIGDIG 180

Query: 181 EHLTTLHLKRCDRGKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYDED 240
           EHLTT+HL  CDRGKRCLYEGST PGGFPNSWNGA+YCTS++A+LKNNE+H W+RG+DE+
Sbjct: 181 EHLTTIHLNCCDRGKRCLYEGSTSPGGFPNSWNGASYCTSDLAVLKNNEIHLWDRGFDEN 240

Query: 241 GNQVWGTKEGPYEFKPVPASSLKDMFSPLN-FSQQSMEKRIEGSFVLQ 288
            NQVWG KEGPYEFKP  +SS+ +  S LN   Q S++K I+GS +LQ
Sbjct: 241 RNQVWGPKEGPYEFKPATSSSINENLSALNILYQSSIDKPIQGSLILQ 268

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BLAST of Lsi02G005300 vs. ExPASy Swiss-Prot
Match: B0JGA0 (Chromophore lyase CpcT/CpeT 3 OS=Microcystis aeruginosa (strain NIES-843) OX=449447 GN=cpcT3 PE=3 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 4.5e-14
Identity = 63/217 (29.03%), Postives = 95/217 (43.78%), Query Frame = 0 

Query: 40  LTKSTTRWDHARFVSQSLSGEKFSKEQAARDPDNYFNIRMITCPA-AEMVDGSTVLYFEQ 99
           LT+S       + V+  L G   ++EQA  +P     ++M TC         S  LY EQ
Sbjct: 12  LTQSLPLNPQVQGVANHLIGVMDTREQAQTNP-RIAKVQMTTCAVDFSPKQDSIYLYQEQ 71

Query: 100 AFSRTPQKPFRQFAELSFIIPIIIQLVLRLQRFYTVKPCSKEMKCDVELSSYAIREMEEY 159
           A      +P+R                   QR   ++P +      VE  +Y +     +
Sbjct: 72  AIIDRLNQPYR-------------------QRILVIQPSAD--NSTVESKAYKLNNAPNF 131

Query: 160 KNFCDRTKDQRPLPEEIAGDIAEHLTTLHLKRCDRGKRCLYEGSTPPGGFPNSWNGAAYC 219
            NFC++   +R L      D+AE + T+ L+    G    Y G TPP G P +  GA   
Sbjct: 132 INFCNKDLTERELN---VSDLAESVCTVFLQPIAGG----YRGETPPQGCPTNARGAVKI 191

Query: 220 TSEIAILKNNEVHTWERGYDEDGNQVWGTKEGPYEFK 256
           T+ I IL +  + T +RGYD  G QVWG ++  Y+F+
Sbjct: 192 TNTI-ILHSQGMDTSDRGYDSLGQQVWGAQDNVYQFR 198

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BLAST of Lsi02G005300 vs. ExPASy Swiss-Prot
Match: Q7NNH3 (Chromophore lyase CpcT/CpeT 1 OS=Gloeobacter violaceus (strain ATCC 29082 / PCC 7421) OX=251221 GN=cpcT1 PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 3.0e-10
Identity = 62/205 (30.24%), Postives = 89/205 (43.41%), Query Frame = 0 

Query: 57  LSGEKFSKEQAARD---PDNYFNIRMITCPAAEMVDGSTVLYF--EQAFSRTPQKPFRQF 116
           L+G   + +QA  D   PD    +RM TC      D S  +Y   EQ  S     P+RQ 
Sbjct: 54  LTGIMTTTQQAQSDAARPD----VRMTTCSVQLEGDKSKAIYLYQEQTMSNNLGAPYRQ- 113

Query: 117 AELSFIIPIIIQLVLRLQRFYTVKPCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPL 176
                          RL R       S + +  VE + +   E +     C +   +R +
Sbjct: 114 ---------------RLLRI----AASADGRA-VESAGFKFVEAKPLAGLCAKPAAERLI 173

Query: 177 -PEEIAGDIAEHLTTLHLKRCDRGKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEV 236
            P  + GD      T  ++    G +  Y G+TP GG  ++  GAA  T+EI + K   +
Sbjct: 174 APMALDGD-----PTCTVRLVQAGDK--YMGTTPEGGCQSNVRGAARITNEITLYKEG-M 225

Query: 237 HTWERGYDEDGNQVWGTKEGPYEFK 256
            T +RG+D  GNQVWG KE PY F+
Sbjct: 234 DTRDRGFDAQGNQVWGAKEEPYRFR 225

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BLAST of Lsi02G005300 vs. ExPASy TrEMBL
Match: A0A6J1C7M9 (chromophore lyase CRL, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111008735 PE=3 SV=1)

HSP 1 Score: 533.9 bits (1374), Expect = 4.2e-148
Identity = 260/287 (90.59%), Postives = 265/287 (92.33%), Query Frame = 0 

Query: 1   MGTDSNSNNDNNNSVGWNRAGGLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGE 60
           MGT+SNSNNDNN+SVGWNRAGGLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGE
Sbjct: 1   MGTNSNSNNDNNSSVGWNRAGGLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGE 60

Query: 61  KFSKEQAARDPDNYFNIRMITCPAAEMVDGSTVLYFEQAFSRTPQKPFRQFAELSFIIPI 120
           KFSKEQA+RDPDNYFNIRM TCPAAEMVDGSTVLYFEQAFSRTPQKPFR           
Sbjct: 61  KFSKEQASRDPDNYFNIRMTTCPAAEMVDGSTVLYFEQAFSRTPQKPFR----------- 120

Query: 121 IIQLVLRLQRFYTVKPCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIAGDIA 180
                   QRFYTVKPCSKEMKCDVELSSYAIR+MEEYKNFCDRTKDQRPLPEEI GDIA
Sbjct: 121 --------QRFYTVKPCSKEMKCDVELSSYAIRDMEEYKNFCDRTKDQRPLPEEIVGDIA 180

Query: 181 EHLTTLHLKRCDRGKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYDED 240
           EHLTTLHLKRCDRGKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYD+D
Sbjct: 181 EHLTTLHLKRCDRGKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYDDD 240

Query: 241 GNQVWGTKEGPYEFKPVPASSLKDMFSPLNFSQQSMEKRIEGSFVLQ 288
           GNQVWGTKEGPYEFKPVPASSLKDMFSPLNFSQ SMEKRIEGSFVLQ
Sbjct: 241 GNQVWGTKEGPYEFKPVPASSLKDMFSPLNFSQLSMEKRIEGSFVLQ 268

[Close]
BLAST of Lsi02G005300 vs. ExPASy TrEMBL
Match: A0A6J1EB15 (chromophore lyase CRL, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111431531 PE=3 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 1.5e-145
Identity = 254/285 (89.12%), Postives = 262/285 (91.93%), Query Frame = 0 

Query: 3   TDSNSNNDNNNSVGWNRAGGLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGEKF 62
           +DS SNNDNNN+VGWNRAGGLIMKTLVL GGALLLKRLTKSTTRWDHARFVSQSLSGEKF
Sbjct: 5   SDSYSNNDNNNAVGWNRAGGLIMKTLVLFGGALLLKRLTKSTTRWDHARFVSQSLSGEKF 64

Query: 63  SKEQAARDPDNYFNIRMITCPAAEMVDGSTVLYFEQAFSRTPQKPFRQFAELSFIIPIII 122
           SKEQAARDP+NYFNIRM+TCPAAEM+DGSTVLYFEQAFSRTPQKPFR             
Sbjct: 65  SKEQAARDPENYFNIRMVTCPAAEMIDGSTVLYFEQAFSRTPQKPFR------------- 124

Query: 123 QLVLRLQRFYTVKPCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIAGDIAEH 182
                 QRFYTVKPCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEI GDIAEH
Sbjct: 125 ------QRFYTVKPCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEH 184

Query: 183 LTTLHLKRCDRGKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYDEDGN 242
           LTTLHLKRCDRGKRCLYEGSTPPGGFPNSWNGAAYCTSE++ILKNNEVHTWERGYDEDGN
Sbjct: 185 LTTLHLKRCDRGKRCLYEGSTPPGGFPNSWNGAAYCTSELSILKNNEVHTWERGYDEDGN 244

Query: 243 QVWGTKEGPYEFKPVPASSLKDMFSPLNFSQQSMEKRIEGSFVLQ 288
           QVWGTKEGPYEFK VPA+SLKDMFSPLNFSQQSMEKRIEGSFVLQ
Sbjct: 245 QVWGTKEGPYEFKAVPANSLKDMFSPLNFSQQSMEKRIEGSFVLQ 270

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BLAST of Lsi02G005300 vs. ExPASy TrEMBL
Match: A0A1S3B0Z6 (chromophore lyase CRL, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484677 PE=3 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 1.5e-145
Identity = 261/288 (90.62%), Postives = 263/288 (91.32%), Query Frame = 0 

Query: 1   MGTDSNSNNDNNNSVGWNRAGGLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGE 60
           MGT+S   NDNNNSVGWNRAGGLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGE
Sbjct: 1   MGTNS---NDNNNSVGWNRAGGLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGE 60

Query: 61  KFSKEQAARDPDNYFNIRMITCPAAEMVDGSTVLYFEQAFSRTPQKPFRQFAELSFIIPI 120
           KFSKEQAARDPDNYFNIRMITCPAAEMVDGSTVLYFEQAFSRTPQKPFR           
Sbjct: 61  KFSKEQAARDPDNYFNIRMITCPAAEMVDGSTVLYFEQAFSRTPQKPFR----------- 120

Query: 121 IIQLVLRLQRFYTVKPCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIAGDIA 180
                   QRFYTVKPCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEI GDIA
Sbjct: 121 --------QRFYTVKPCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIA 180

Query: 181 EHLTTLHLKRCDRGKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYDED 240
           EHLTTLHLKRCDRGKRCLYEGSTPPGGFPNSWNGA+YCTSEIAILKNNEVHTWERGYDED
Sbjct: 181 EHLTTLHLKRCDRGKRCLYEGSTPPGGFPNSWNGASYCTSEIAILKNNEVHTWERGYDED 240

Query: 241 GNQVWGTKEGPYEFKPVPASSLKDMFSPLNFSQQSMEKRI-EGSFVLQ 288
           GNQVWGTKEGPYEFKPVPASSLKDMFSPLNFSQ SMEKRI EGSFVLQ
Sbjct: 241 GNQVWGTKEGPYEFKPVPASSLKDMFSPLNFSQPSMEKRILEGSFVLQ 266

[Close]
BLAST of Lsi02G005300 vs. ExPASy TrEMBL
Match: A0A0A0LUI3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G051790 PE=3 SV=1)

HSP 1 Score: 523.5 bits (1347), Expect = 5.7e-145
Identity = 260/288 (90.28%), Postives = 263/288 (91.32%), Query Frame = 0 

Query: 1   MGTDSNSNNDNNNSVGWNRAGGLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGE 60
           MGT+S   NDNNNSVGWNRAGGLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGE
Sbjct: 1   MGTNS---NDNNNSVGWNRAGGLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGE 60

Query: 61  KFSKEQAARDPDNYFNIRMITCPAAEMVDGSTVLYFEQAFSRTPQKPFRQFAELSFIIPI 120
           KFSKEQAARDPDNYFNIRMITCPAAEMVDGSTVLYFEQAFSRTPQKPFR           
Sbjct: 61  KFSKEQAARDPDNYFNIRMITCPAAEMVDGSTVLYFEQAFSRTPQKPFR----------- 120

Query: 121 IIQLVLRLQRFYTVKPCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIAGDIA 180
                   QRFYTVKPCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEI GDIA
Sbjct: 121 --------QRFYTVKPCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIA 180

Query: 181 EHLTTLHLKRCDRGKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYDED 240
           EHLTTLHLKRCDRGKRCLYEGSTPPGGFPNSW+GA+YCTSEIAILKNNEVHTWERGYDED
Sbjct: 181 EHLTTLHLKRCDRGKRCLYEGSTPPGGFPNSWSGASYCTSEIAILKNNEVHTWERGYDED 240

Query: 241 GNQVWGTKEGPYEFKPVPASSLKDMFSPLNFSQQSMEKRI-EGSFVLQ 288
           GNQVWGTKEGPYEFKPVPASSLKDMFSPLNFSQ SMEKRI EGSFVLQ
Sbjct: 241 GNQVWGTKEGPYEFKPVPASSLKDMFSPLNFSQPSMEKRILEGSFVLQ 266

[Close]
BLAST of Lsi02G005300 vs. ExPASy TrEMBL
Match: A0A6J1KRH9 (chromophore lyase CRL, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111495810 PE=3 SV=1)

HSP 1 Score: 518.5 bits (1334), Expect = 1.8e-143
Identity = 252/285 (88.42%), Postives = 260/285 (91.23%), Query Frame = 0 

Query: 3   TDSNSNNDNNNSVGWNRAGGLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGEKF 62
           +DS SNND+NN+VGWNRAGGLIMKTLVL GGALLLKRLTKSTTRWDHARFVSQSLSGEKF
Sbjct: 5   SDSYSNNDDNNAVGWNRAGGLIMKTLVLFGGALLLKRLTKSTTRWDHARFVSQSLSGEKF 64

Query: 63  SKEQAARDPDNYFNIRMITCPAAEMVDGSTVLYFEQAFSRTPQKPFRQFAELSFIIPIII 122
           SKEQAARDP+NYFNIRM+TCPAAEMVDGSTVLYFEQAFSRTPQKPFR             
Sbjct: 65  SKEQAARDPENYFNIRMVTCPAAEMVDGSTVLYFEQAFSRTPQKPFR------------- 124

Query: 123 QLVLRLQRFYTVKPCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIAGDIAEH 182
                 QRFYTVKPCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQ PLPEEI GDIAEH
Sbjct: 125 ------QRFYTVKPCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQCPLPEEIVGDIAEH 184

Query: 183 LTTLHLKRCDRGKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYDEDGN 242
           LTTLHLKRCDRGKRCLYEGSTPPG FPNSWNGAAYCTSE++ILKNNEVHTWERGYDEDGN
Sbjct: 185 LTTLHLKRCDRGKRCLYEGSTPPGSFPNSWNGAAYCTSELSILKNNEVHTWERGYDEDGN 244

Query: 243 QVWGTKEGPYEFKPVPASSLKDMFSPLNFSQQSMEKRIEGSFVLQ 288
           QVWGTKEGPYEFK VPA+SLKDMFSPLNFSQQSMEKRIEGSFVLQ
Sbjct: 245 QVWGTKEGPYEFKAVPANSLKDMFSPLNFSQQSMEKRIEGSFVLQ 270

[Close]
BLAST of Lsi02G005300 vs. NCBI nr
Match: XP_038895463.1 (chromophore lyase CRL, chloroplastic [Benincasa hispida])

HSP 1 Score: 538.9 bits (1387), Expect = 2.7e-149
Identity = 264/287 (91.99%), Postives = 264/287 (91.99%), Query Frame = 0 

Query: 1   MGTDSNSNNDNNNSVGWNRAGGLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGE 60
           MG DSNSNNDNNNSVGWNRAGGLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGE
Sbjct: 1   MGMDSNSNNDNNNSVGWNRAGGLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGE 60

Query: 61  KFSKEQAARDPDNYFNIRMITCPAAEMVDGSTVLYFEQAFSRTPQKPFRQFAELSFIIPI 120
           KFSKEQAARDPDNYFNIRMITCPAAEMVDGSTVLYFEQAFSRTPQKPFR           
Sbjct: 61  KFSKEQAARDPDNYFNIRMITCPAAEMVDGSTVLYFEQAFSRTPQKPFR----------- 120

Query: 121 IIQLVLRLQRFYTVKPCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIAGDIA 180
                   QRFYTVKPCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEI GDIA
Sbjct: 121 --------QRFYTVKPCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIA 180

Query: 181 EHLTTLHLKRCDRGKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYDED 240
           EHLTTLHLKRCDRGKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYDED
Sbjct: 181 EHLTTLHLKRCDRGKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYDED 240

Query: 241 GNQVWGTKEGPYEFKPVPASSLKDMFSPLNFSQQSMEKRIEGSFVLQ 288
           GNQVWGTKEGPYEFKPVPASSLKDMFSPLNFSQ S EKRIEGSFVLQ
Sbjct: 241 GNQVWGTKEGPYEFKPVPASSLKDMFSPLNFSQPSTEKRIEGSFVLQ 268

[Close]
BLAST of Lsi02G005300 vs. NCBI nr
Match: XP_022137217.1 (chromophore lyase CRL, chloroplastic [Momordica charantia])

HSP 1 Score: 533.9 bits (1374), Expect = 8.7e-148
Identity = 260/287 (90.59%), Postives = 265/287 (92.33%), Query Frame = 0 

Query: 1   MGTDSNSNNDNNNSVGWNRAGGLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGE 60
           MGT+SNSNNDNN+SVGWNRAGGLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGE
Sbjct: 1   MGTNSNSNNDNNSSVGWNRAGGLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGE 60

Query: 61  KFSKEQAARDPDNYFNIRMITCPAAEMVDGSTVLYFEQAFSRTPQKPFRQFAELSFIIPI 120
           KFSKEQA+RDPDNYFNIRM TCPAAEMVDGSTVLYFEQAFSRTPQKPFR           
Sbjct: 61  KFSKEQASRDPDNYFNIRMTTCPAAEMVDGSTVLYFEQAFSRTPQKPFR----------- 120

Query: 121 IIQLVLRLQRFYTVKPCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIAGDIA 180
                   QRFYTVKPCSKEMKCDVELSSYAIR+MEEYKNFCDRTKDQRPLPEEI GDIA
Sbjct: 121 --------QRFYTVKPCSKEMKCDVELSSYAIRDMEEYKNFCDRTKDQRPLPEEIVGDIA 180

Query: 181 EHLTTLHLKRCDRGKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYDED 240
           EHLTTLHLKRCDRGKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYD+D
Sbjct: 181 EHLTTLHLKRCDRGKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYDDD 240

Query: 241 GNQVWGTKEGPYEFKPVPASSLKDMFSPLNFSQQSMEKRIEGSFVLQ 288
           GNQVWGTKEGPYEFKPVPASSLKDMFSPLNFSQ SMEKRIEGSFVLQ
Sbjct: 241 GNQVWGTKEGPYEFKPVPASSLKDMFSPLNFSQLSMEKRIEGSFVLQ 268

[Close]
BLAST of Lsi02G005300 vs. NCBI nr
Match: XP_022923973.1 (chromophore lyase CRL, chloroplastic-like [Cucurbita moschata] >XP_023520394.1 chromophore lyase CRL, chloroplastic-like [Cucurbita pepo subsp. pepo] >KAG7019765.1 Chromophore lyase CRL, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 525.4 bits (1352), Expect = 3.1e-145
Identity = 254/285 (89.12%), Postives = 262/285 (91.93%), Query Frame = 0 

Query: 3   TDSNSNNDNNNSVGWNRAGGLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGEKF 62
           +DS SNNDNNN+VGWNRAGGLIMKTLVL GGALLLKRLTKSTTRWDHARFVSQSLSGEKF
Sbjct: 5   SDSYSNNDNNNAVGWNRAGGLIMKTLVLFGGALLLKRLTKSTTRWDHARFVSQSLSGEKF 64

Query: 63  SKEQAARDPDNYFNIRMITCPAAEMVDGSTVLYFEQAFSRTPQKPFRQFAELSFIIPIII 122
           SKEQAARDP+NYFNIRM+TCPAAEM+DGSTVLYFEQAFSRTPQKPFR             
Sbjct: 65  SKEQAARDPENYFNIRMVTCPAAEMIDGSTVLYFEQAFSRTPQKPFR------------- 124

Query: 123 QLVLRLQRFYTVKPCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIAGDIAEH 182
                 QRFYTVKPCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEI GDIAEH
Sbjct: 125 ------QRFYTVKPCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEH 184

Query: 183 LTTLHLKRCDRGKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYDEDGN 242
           LTTLHLKRCDRGKRCLYEGSTPPGGFPNSWNGAAYCTSE++ILKNNEVHTWERGYDEDGN
Sbjct: 185 LTTLHLKRCDRGKRCLYEGSTPPGGFPNSWNGAAYCTSELSILKNNEVHTWERGYDEDGN 244

Query: 243 QVWGTKEGPYEFKPVPASSLKDMFSPLNFSQQSMEKRIEGSFVLQ 288
           QVWGTKEGPYEFK VPA+SLKDMFSPLNFSQQSMEKRIEGSFVLQ
Sbjct: 245 QVWGTKEGPYEFKAVPANSLKDMFSPLNFSQQSMEKRIEGSFVLQ 270

[Close]
BLAST of Lsi02G005300 vs. NCBI nr
Match: XP_008440119.1 (PREDICTED: chromophore lyase CRL, chloroplastic [Cucumis melo])

HSP 1 Score: 525.4 bits (1352), Expect = 3.1e-145
Identity = 261/288 (90.62%), Postives = 263/288 (91.32%), Query Frame = 0 

Query: 1   MGTDSNSNNDNNNSVGWNRAGGLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGE 60
           MGT+S   NDNNNSVGWNRAGGLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGE
Sbjct: 1   MGTNS---NDNNNSVGWNRAGGLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGE 60

Query: 61  KFSKEQAARDPDNYFNIRMITCPAAEMVDGSTVLYFEQAFSRTPQKPFRQFAELSFIIPI 120
           KFSKEQAARDPDNYFNIRMITCPAAEMVDGSTVLYFEQAFSRTPQKPFR           
Sbjct: 61  KFSKEQAARDPDNYFNIRMITCPAAEMVDGSTVLYFEQAFSRTPQKPFR----------- 120

Query: 121 IIQLVLRLQRFYTVKPCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIAGDIA 180
                   QRFYTVKPCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEI GDIA
Sbjct: 121 --------QRFYTVKPCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIA 180

Query: 181 EHLTTLHLKRCDRGKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYDED 240
           EHLTTLHLKRCDRGKRCLYEGSTPPGGFPNSWNGA+YCTSEIAILKNNEVHTWERGYDED
Sbjct: 181 EHLTTLHLKRCDRGKRCLYEGSTPPGGFPNSWNGASYCTSEIAILKNNEVHTWERGYDED 240

Query: 241 GNQVWGTKEGPYEFKPVPASSLKDMFSPLNFSQQSMEKRI-EGSFVLQ 288
           GNQVWGTKEGPYEFKPVPASSLKDMFSPLNFSQ SMEKRI EGSFVLQ
Sbjct: 241 GNQVWGTKEGPYEFKPVPASSLKDMFSPLNFSQPSMEKRILEGSFVLQ 266

[Close]
BLAST of Lsi02G005300 vs. NCBI nr
Match: KAG6584174.1 (Chromophore lyase CRL, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 524.2 bits (1349), Expect = 6.9e-145
Identity = 254/285 (89.12%), Postives = 261/285 (91.58%), Query Frame = 0 

Query: 3   TDSNSNNDNNNSVGWNRAGGLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGEKF 62
           +DS SNNDNNN+VGWNRAGGLIMKTLVL GGALLLKRLTKSTTRWDHARFVSQSLSGEKF
Sbjct: 5   SDSYSNNDNNNAVGWNRAGGLIMKTLVLFGGALLLKRLTKSTTRWDHARFVSQSLSGEKF 64

Query: 63  SKEQAARDPDNYFNIRMITCPAAEMVDGSTVLYFEQAFSRTPQKPFRQFAELSFIIPIII 122
           SKEQAARDP+NYFNIRM+TCPAAEM DGSTVLYFEQAFSRTPQKPFR             
Sbjct: 65  SKEQAARDPENYFNIRMVTCPAAEMTDGSTVLYFEQAFSRTPQKPFR------------- 124

Query: 123 QLVLRLQRFYTVKPCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIAGDIAEH 182
                 QRFYTVKPCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEI GDIAEH
Sbjct: 125 ------QRFYTVKPCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEH 184

Query: 183 LTTLHLKRCDRGKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYDEDGN 242
           LTTLHLKRCDRGKRCLYEGSTPPGGFPNSWNGAAYCTSE++ILKNNEVHTWERGYDEDGN
Sbjct: 185 LTTLHLKRCDRGKRCLYEGSTPPGGFPNSWNGAAYCTSELSILKNNEVHTWERGYDEDGN 244

Query: 243 QVWGTKEGPYEFKPVPASSLKDMFSPLNFSQQSMEKRIEGSFVLQ 288
           QVWGTKEGPYEFK VPA+SLKDMFSPLNFSQQSMEKRIEGSFVLQ
Sbjct: 245 QVWGTKEGPYEFKAVPANSLKDMFSPLNFSQQSMEKRIEGSFVLQ 270

[Close]
BLAST of Lsi02G005300 vs. TAIR 10
Match: AT5G51020.1 (crumpled leaf )

HSP 1 Score: 409.5 bits (1051), Expect = 2.3e-114
Identity = 196/288 (68.06%), Postives = 235/288 (81.60%), Query Frame = 0 

Query: 1   MGTDSNSNNDNNNSVGWNRAGGLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGE 60
           MGT+S S+ +++++ GW+RA GL++KTLVL+GGALL+KRLTKSTTR DHAR VS+SL+GE
Sbjct: 1   MGTESGSDPESSSN-GWSRARGLVVKTLVLIGGALLIKRLTKSTTRRDHARVVSRSLTGE 60

Query: 61  KFSKEQAARDPDNYFNIRMITCPAAEMVDGSTVLYFEQAFSRTPQKPFRQFAELSFIIPI 120
           KF++EQA+RDPDNYFNIRM++CPAAEMVDGS VLY EQAF RTPQKPFR           
Sbjct: 61  KFTREQASRDPDNYFNIRMLSCPAAEMVDGSEVLYLEQAFWRTPQKPFR----------- 120

Query: 121 IIQLVLRLQRFYTVKPCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIAGDIA 180
                   QR Y VKPC KE+KCDVE+SSYAIR+ EEYKNFCDR KDQRPLPEE+ GDI 
Sbjct: 121 --------QRLYMVKPCPKELKCDVEVSSYAIRDAEEYKNFCDRPKDQRPLPEEVIGDIG 180

Query: 181 EHLTTLHLKRCDRGKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYDED 240
           EHLTT+HL  CDRGKRCLYEGST PGGFPNSWNGA+YCTS++A+LKNNE+H W+RG+DE+
Sbjct: 181 EHLTTIHLNCCDRGKRCLYEGSTSPGGFPNSWNGASYCTSDLAVLKNNEIHLWDRGFDEN 240

Query: 241 GNQVWGTKEGPYEFKPVPASSLKDMFSPLN-FSQQSMEKRIEGSFVLQ 288
            NQVWG KEGPYEFKP  +SS+ +  S LN   Q S++K I+GS +LQ
Sbjct: 241 RNQVWGPKEGPYEFKPATSSSINENLSALNILYQSSIDKPIQGSLILQ 268

The following BLAST results are available for this feature:
BLAST of Lsi02G005300 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FI463.2e-11368.06Chromophore lyase CRL, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRL PE=1... [more]
B0JGA04.5e-1429.03Chromophore lyase CpcT/CpeT 3 OS=Microcystis aeruginosa (strain NIES-843) OX=449... [more]
Q7NNH33.0e-1030.24Chromophore lyase CpcT/CpeT 1 OS=Gloeobacter violaceus (strain ATCC 29082 / PCC ... [more]
BLAST of Lsi02G005300 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1C7M94.2e-14890.59chromophore lyase CRL, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111008... [more]
A0A6J1EB151.5e-14589.12chromophore lyase CRL, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC11... [more]
A0A1S3B0Z61.5e-14590.63chromophore lyase CRL, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484677 PE=... [more]
A0A0A0LUI35.7e-14590.28Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G051790 PE=3 SV=1[more]
A0A6J1KRH91.8e-14388.42chromophore lyase CRL, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC1114... [more]
BLAST of Lsi02G005300 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038895463.12.7e-14991.99chromophore lyase CRL, chloroplastic [Benincasa hispida][more]
XP_022137217.18.7e-14890.59chromophore lyase CRL, chloroplastic [Momordica charantia][more]
XP_022923973.13.1e-14589.12chromophore lyase CRL, chloroplastic-like [Cucurbita moschata] >XP_023520394.1 c... [more]
XP_008440119.13.1e-14590.63PREDICTED: chromophore lyase CRL, chloroplastic [Cucumis melo][more]
KAG6584174.16.9e-14589.12Chromophore lyase CRL, chloroplastic, partial [Cucurbita argyrosperma subsp. sor... [more]
BLAST of Lsi02G005300 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G51020.12.3e-11468.06crumpled leaf [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010404Chromophore lyase CpcT/CpeTPFAMPF06206CpeTcoord: 53..110
e-value: 1.0E-14
score: 55.0
coord: 129..255
e-value: 2.8E-26
score: 92.6
IPR010404Chromophore lyase CpcT/CpeTPANTHERPTHR35137CHROMOPHORE LYASE CRL, CHLOROPLASTICcoord: 1..111
coord: 129..287
IPR010404Chromophore lyase CpcT/CpeTCDDcd16338CpcTcoord: 53..257
e-value: 3.79173E-49
score: 159.402
IPR038672Chromophore lyase CpcT/CpeT superfamilyGENE3D2.40.128.590CpcT/CpeT domaincoord: 124..265
e-value: 9.1E-25
score: 89.6
coord: 48..112
e-value: 4.1E-12
score: 48.2
NoneNo IPR availablePANTHERPTHR35137:SF4BNAA01G14430D PROTEINcoord: 1..111
coord: 129..287

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi02G005300.1Lsi02G005300.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0098586 cellular response to virus
biological_process GO:0010020 chloroplast fission
biological_process GO:0017009 protein-phycocyanobilin linkage
biological_process GO:0051302 regulation of cell division
biological_process GO:0000302 response to reactive oxygen species
biological_process GO:0046741 transport of virus in host, tissue to tissue
cellular_component GO:0009707 chloroplast outer membrane
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0016829 lyase activity