Lsi02G004070 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGCAGTTTGAAAGAAATATCTGATGCAGAACAGGAATTAATGAATTACATTTATTTTTCCCTACTATTATTTACAAGGATCTAAATGATGGATTAATTTCAAACCAAATGGACAGATATTGAACAGAGAACTCCAACATAACTAAAGCAAAACCATTACCCCATCGATTGTCAGTGTTGTTCTGAGTCCCTATCGACACGATATTCAAGTTAAAATCACGTAATTCGTTTAAGCAATTTTATATTAGTAATCTTCTCATAAGGAATAAGTACTAGAAATATGACCATGATAAGAGACTTAGACACAACGTTGAACAAATTTTTTGCAGCTCTAATGATAATATTAGGACATCTTCGAATCAGCAGCAATGAATACTTTGCAAAGGAATAGTTGGGAAAAATTCAATTTACACCCCTAACTTTGTAGTTTTATCACAGGTTAATTGTATAAATTAAAGTCCTAAGCTTTTCACAAGTGTATTAATTAACCCCTAGCAAAACAAAGTTTAGGGTTGTAAATGGATACTTTTCCAAAATAGTTTTTTCCAAATCTCACATGGTTGAGGATGAAAATGAAGTAGATCTTATATAAATAACATCATCAAAACAAGTAAAAACAGCAGATCATTTAGGAGGAAAATTGCACTGCTTCCATGGAGACAATCAAGTTCTTTGTTAGTGAGCCGAGTAAGATCTAACAAGAATGCGAGTAGCATTCTCAAACGTTGGGGACTTTAATAATGATAGCAAAAGCCCATAAAACTATAGAAATTAACAATGTATAACATTCAAGAAAAATGATGATTCAAGAAACACATTCAAAATCGGACTGAGTTCAAAGTGAAGATAACTGAAACACAAAGTTTGATAACATTACTCCAATACTTCGAATAACGCCACAAGAAATATCAAAACTAATTTGGAAACAAAATCATAAACTAAAAGTTACCCAATAAACCTAAGCCGTAAGGACAACCGCACCACCATTCTCTTTGATCTTCTTCTCTGCAATTTTGGAGATGAGCTTGGCTTTCACAACGACGGGCTGGTTCTCAGGCAAAACCCCTTTCCCCAAAACTTTGAAGTACCCAAACTGGGTAACATCAATCAAAGGAACATTATCCTTAGAAGCCTTGTCCTTGACCTCCTGAGGGACGAGAGACCAGAGCTTGTCGACGTTTACAATGGGGCAATAGAATTTGTTACGGAGCTTGTGGAAGTACCTCATACCAACTTTACCGAAATAACCAGGATGGTATTTGTCGAAGAGGATTCTGTGATGGTGCATACCTCCGGCGTTACCACGACCACCAGGATGCTTGCGGTGCTTGCCGATACGACCATGGCCGGCGCTCACGTGACCGCGCTTCTTTCTGTTCTTCTTGAAGCGGGTCGTCATTTCGTCGGCGAGTGTAGGAGAATTAGGTTTTCAGAGTTGCAGGGAGCGGCGAGCGCGAGGAAGTGCAAATTAGGGTTTGATTGA ATGGAGCATTACCCAATAAACCTAAGCCGTAAGGACAACCGCACCACCATTCTCTTTGATCTTCTTCTCTGCAATTTTGGAGATGAGCTTGGCTTTCACAACGACGGGCTGGTTCTCAGGCAAAACCCCTTTCCCCAAAACTTTGAAGTACCCAAACTGGGTAACATCAATCAAAGGAACATTATCCTTAGAAGCCTTGTCCTTGACCTCCTGAGGGACGAGAGACCAGAGCTTGTCGACGTTTACAATGGGGCAATAGAATTTGTTACGGAGCTTGTGGAAGTACCTCATACCAACTTTACCGAAATAACCAGGATGGTATTTGTCGAAGAGGATTCTGTGATGGTGCATACCTCCGGCGTTACCACGACCACCAGGATGCTTGCGGTGCTTGCCGATACGACCATGGCCGGCGCTCACGTGACCGCGCTTCTTTCTGTTCTTCTTGAAGCGGGTCGTCATTTCGTCGGCGAGTGTAGGAGAATTAGGTTTTCAGAGTTGCAGGGAGCGGCGAGCGCGAGGAAGTGCAAATTAGGGTTTGATTGA ATGGAGCATTACCCAATAAACCTAAGCCGTAAGGACAACCGCACCACCATTCTCTTTGATCTTCTTCTCTGCAATTTTGGAGATGAGCTTGGCTTTCACAACGACGGGCTGGTTCTCAGGCAAAACCCCTTTCCCCAAAACTTTGAAGTACCCAAACTGGGTAACATCAATCAAAGGAACATTATCCTTAGAAGCCTTGTCCTTGACCTCCTGAGGGACGAGAGACCAGAGCTTGTCGACGTTTACAATGGGGCAATAGAATTTGTTACGGAGCTTGTGGAAGTACCTCATACCAACTTTACCGAAATAACCAGGATGGTATTTGTCGAAGAGGATTCTGTGATGGTGCATACCTCCGGCGTTACCACGACCACCAGGATGCTTGCGGTGCTTGCCGATACGACCATGGCCGGCGCTCACGTGACCGCGCTTCTTTCTGTTCTTCTTGAAGCGGGTCGTCATTTCGTCGGCGAGTGTAGGAGAATTAGGTTTTCAGAGTTGCAGGGAGCGGCGAGCGCGAGGAAGTGCAAATTAGGGTTTGATTGA MEHYPINLSRKDNRTTILFDLLLCNFGDELGFHNDGLVLRQNPFPQNFEVPKLGNINQRNIILRSLVLDLLRDERPELVDVYNGAIEFVTELVEVPHTNFTEITRMVFVEEDSVMVHTSGVTTTTRMLAVLADTTMAGAHVTALLSVLLEAGRHFVGECRRIRFSELQGAASARKCKLGFD Homology
BLAST of Lsi02G004070 vs. ExPASy Swiss-Prot
Match: P53143 (Putative uncharacterized protein YGL102C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YGL102C PE=5 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 7.7e-12 Identity = 52/137 (37.96%), Postives = 73/137 (53.28%), Query Frame = 0
BLAST of Lsi02G004070 vs. ExPASy TrEMBL
Match: W9RN37 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_027707 PE=4 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 3.8e-38 Identity = 87/148 (58.78%), Postives = 116/148 (78.38%), Query Frame = 0
BLAST of Lsi02G004070 vs. ExPASy TrEMBL
Match: A0A5D2GZF1 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_A04G182500v1 PE=4 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 1.3e-33 Identity = 84/149 (56.38%), Postives = 106/149 (71.14%), Query Frame = 0
BLAST of Lsi02G004070 vs. ExPASy TrEMBL
Match: A0A7N0T5V7 (Uncharacterized protein OS=Kalanchoe fedtschenkoi OX=63787 PE=4 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 5.3e-32 Identity = 79/151 (52.32%), Postives = 108/151 (71.52%), Query Frame = 0
BLAST of Lsi02G004070 vs. ExPASy TrEMBL
Match: A0A7N0U1I4 (Uncharacterized protein OS=Kalanchoe fedtschenkoi OX=63787 PE=4 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 1.7e-30 Identity = 77/148 (52.03%), Postives = 105/148 (70.95%), Query Frame = 0
BLAST of Lsi02G004070 vs. ExPASy TrEMBL
Match: A0A5D2VXZ0 (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D02G188100v1 PE=4 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 8.3e-25 Identity = 65/125 (52.00%), Postives = 89/125 (71.20%), Query Frame = 0
BLAST of Lsi02G004070 vs. NCBI nr
Match: EXB82531.1 (hypothetical protein L484_027707 [Morus notabilis]) HSP 1 Score: 167.9 bits (424), Expect = 7.9e-38 Identity = 87/148 (58.78%), Postives = 116/148 (78.38%), Query Frame = 0
BLAST of Lsi02G004070 vs. NCBI nr
Match: KAG8500153.1 (hypothetical protein CXB51_004461 [Gossypium anomalum]) HSP 1 Score: 155.2 bits (391), Expect = 5.3e-34 Identity = 85/149 (57.05%), Postives = 108/149 (72.48%), Query Frame = 0
BLAST of Lsi02G004070 vs. NCBI nr
Match: TYH23088.1 (hypothetical protein ES288_A04G182500v1 [Gossypium darwinii]) HSP 1 Score: 152.9 bits (385), Expect = 2.6e-33 Identity = 84/149 (56.38%), Postives = 106/149 (71.14%), Query Frame = 0
BLAST of Lsi02G004070 vs. NCBI nr
Match: KAG4163103.1 (hypothetical protein ERO13_D01G150701v2 [Gossypium hirsutum]) HSP 1 Score: 149.1 bits (375), Expect = 3.8e-32 Identity = 79/149 (53.02%), Postives = 107/149 (71.81%), Query Frame = 0
BLAST of Lsi02G004070 vs. NCBI nr
Match: KAF3783033.1 (hypothetical protein EJ110_NYTH32983 [Nymphaea thermarum]) HSP 1 Score: 128.3 bits (321), Expect = 6.9e-26 Identity = 70/157 (44.59%), Postives = 103/157 (65.61%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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