Lsi02G000540 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G000540
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Ankyrin repeat domain-containing protein 50 isoform 1
Location	chr02: 507791 .. 512768 (-)
RNA-Seq Expression	Lsi02G000540
Synteny	Lsi02G000540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGTTATGGGCCTTTACTGAAAAGCCCGATAATTTTGGGGCACAGTGCGTTGAGCCCAAATCCAAATTACCCTTCTGGAAGATTCATCGCTCGTTTGCTTCCCTCACACGAACGCAAACGCAATCGCAAGTGATTTTTGCTTTCTGCTTGTTGGTTATCGCTGGTCAATCTCTCTAGGTGCGAAGGAAGAGGGAGAGAGGGAGCCTGCCAAAGGGGTTTCCTCTGGATTTCTAGTTCGAAGGGAAGCAATCGAGATTCATAGCAATGGCTGGGAAAGAAGTTCGGGAATACACCAATCTCTCCGACCCAAAAGGTACCCACATTAAATTATTATACTGCAGCTTTGATCCTTGTTCTTATTTTTGTTTTTCTGAGCCGCCATTCCCATTGCTGTTTATAATTGCAGACAAGAAGTGGGGTAAAGGGAAGGATAAAATAGACGATGAAGATATTACGTTTCAACGGATGGTTGCGAAGGTTAGCGCAATTTTGCCTCAACCACCCTCATTCGCGCTCTTTCTTGAACAATAAGTTTCCTTTTATTTAGGTTCTCTATCTTTCTTTGTTCGTCGTATAACCTTATCAGTTTATTGAGTTAACATTTTTCTGAATTGGACTGAGCATTTTCAAGGGATAATTGGAGAGTTTCTTAATAGTTTGTTCTCTTAAGACTCTTATTGGTTGTAATTGGACATTGCATTGAATACATAAAAAAAATGGAGGAAATTAACTATCAGCTTGATGATATTCATTATTGTAGGCGTCATTCACTCATTCTTCTATACAATCATTATCGATCGAAAGAAGACACAGCAAAAATGAATTCCTATTTTTCTTCGTAAAACTAAAACTTTTTAATGTAGGCTCTGTTTGGAAACAATTTTGTTCTTTTTTGTTTTTGTTTTTTAAAAATTAAGTCTATTTCCTCTCATTTACTTACAATGGGTTGCATCTTTTTTAAGTAAAATTTTTAGGCAAATTTCAAATTCCAGAAACATGTTTTTAAAAACTACTTTTTTTTAGTTTTCAAATTTTGGTTTGAATTTTGAAAATATTGGTAAAAAGTAGATAACAAATTAAGAAATTTAGAGGTGGAAGGAGTGTTGGCTTAATTTTCAAAAAATAAAAAAATAAAAAAAATCAAAGGGTTACCGAATGGAGCTGTAGTAATTTACTTGTGATTTGTGAAACGTGTATTGACTCAATGCCACCCTCCCTTCTTTTAAAGCTTGGAATTCAAATACTGGGAGATGTGATACAGGGTAGGAATTCTGATGCATAGCGTAGTTTCATACTTCTTCTTGGGATATTTTGGACCGTTGATTACTATACGTTACAAATATTATATCACTCTCTACTTTCAAGTTTTCAACTTAGATCTTCAAGAAAAGCTCAAAAAGGTGTTAAATGTTGTCTTGGAGCTAGCGTTGGTTGGGCTACCAGCTAAGCCTCTCCGATGATTAGTGGGGTGGGTCATGAACATAGAAGTAAGGCTCCAACACTCTAGTTGTAAAAGGGGGAAGAAAATAATAAAACAACACCATGTGGTGTAGCAATAATATGATCAATTTGAACTGAGAGGATTCTATAATCTATGACTTATGATAAGACCAACCTATGGAATGGTAAGTGACTATATACTGCTTATTCATTCCCTTGTAATTCGCTGATTTAAGAATTTGTTATTAAAATTTTGCTGCCACATTCTGTTTGTCATAGTCTACTTCTTAACTTTCTAAGACAGAGACAGATTTGGATAGGCAGATAGGCATTTTGGATAGGGCTTTCATGCTTCTCTGAGTAGCCGGCATTTCTTAAACCTGGAATGTTTTAAGGCTAAAATTCTCATTAATAGAACACTTGCCACTTAACAGTTGACATTGTGTGGTAGAGTCAGCTTGTCATTTGACAAAGCTCTAAATTTCCATGTGCTTGAGCAAACAAGTTTATCCTCCTGTACTAATTCCATTTTGGATAGAAGGTCAAATCTCAAATCTATTTTCCTATAAGACTATAAGTATGAACAGAAGGATCATTCTGGTTATCTCAAGCGTGACCTAAAGGTTGGTTTAGTGATGGTAGCTCCCTGCCCAAGCAATTGGTTCCCTGATCATTACAGAGATGCATCTGCAATATTGATATTTTTGTTAATTTTCCCAAGCTGTTTAGACCTAAAGCTTATATGTATTTGGGCACATGAGTTGTTGAATTTATAGATACAGGTAACCAATATTTCCTGGTGACCTAGATTTAAATTTTAATTTTTACCCTTGGTTCTTTTCAAGTTCTTGTTCCCCCACTCCCTTCCTTTTGATCATTTTCATATTCAGTATGTGACGTATAGTATTTTCGTTGATTAAATACCCATGTTGTGCTTGTCAAGAAAAACGTTTCTCCTTGCCCCCTTGTGTTATGAAACGCATCTCATTTCATGCAGTAATTATTGGCCTTCGTATGCTGTTAATTGAAGTGACCTGAAGTGACCGTTAAAGAAAATATCAGATGCCCTGGAGATTTAGGTTCTCATGTATTGTGAATATTGTCCTGTTGAAATAATTCATCAGAAAAAAAAAACGTTCTTTTGAAGTATTCAGTAGGTTGTTTCTTATAGTTCTCTATATCCATTTCATCATTTGATCTTTTCCCCAGCATTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTCTGTAAGAGACAAATTTCATTATCCGCAGGTTTTCCATATTTTCTCATTATGCCTTTTTAGTAGTTAATACCTGTTATAAATGGCAGAGTGACATTGCTGCCACGATCTACCGAGATCAGCCCTTCGTTGCTCCAATTCATGGAAAAAAGAATAAGAAAAAAAAAAGTAGTTAATGCCTGTTTTACTTTCAGTCTTAAGTTGGTTGGTTTCTCCTGTGAAATCCTGAGGAAAGTTTTCTAATAACATGCCCTGGCAGGGATCTTGGCTTTTCTTACCGGGTGGCTGATACAAGCAGATGCAAGAGGTTGCAGGAGAACGTGGAGGTTACCTTCATGGACGAGGCGGTAACCCTTTCTTTCTCTGTCTCAGTGTGTCTTTGTGTGTGCATCCCCTAACAATTCTTAATATTAGTTTTGGATTCTTAATGTTCACTGAGTTTGGAGTTTGCAGCCTTGGACAGTGATGATTTGCTCTATCTTAAGGAGCAGATGGAAGCAGAGGAGGATGCAGAGCGCCTCCTTAGACGCACTGAGAAACGAGCCTTTGCAGCATTCAAGATATCCTTTTTCATTATGGAACTTGTAGTTATGCAAATTAAAGATACTATTGTGTTGATAACATTCAAAGTAGCTATGGTGGTTTTCTTTTCCCTTGTAAAAGATTTCTCCTGTTGGATAAAATAATGTCTCAACCCCTCATGTTGCTGTCTCATTTCCTTAACAAATCAATACAAAGCTGCTAGTTTGGCTGATTCTGCACCTGCATCTGTTCCCTTGGCGCTTCGTGTTGAGCCAAAGCCAAAGAGTGGAATCAGGTCTCTGTCTGTACGCCACCTTATGATTGCACCCCCCATTACGCTTTTAATGTTTTCTAATGAATCAGGCTGGTTGCCTCTGCCTGTGTACTTCACTCATATATGTGATCAATGCTTTCTCGATTGCAGACAGCAAGATCTATTGAAAAGAGTAGTGGAAGTTAAACCCAAAAGGCCTAGAGTTTCAAATCAAGCAGATTTATCAAATCCCAAGCATGACATTGACAATGAAAAGGTGAAAGAGAACCCCTTACTGAAAACAAGCAAAACTGAAGGCGAAACAGAAGCTGAAAATCCTGTCAAGAGTTTACTAGGTTTGGCATATGCTAGTTCTGATGATGAAGACGAA

mRNA sequence

GAGTTATGGGCCTTTACTGAAAAGCCCGATAATTTTGGGGCACAGTGCGTTGAGCCCAAATCCAAATTACCCTTCTGGAAGATTCATCGCTCGTTTGCTTCCCTCACACGAACGCAAACGCAATCGCAATTCGAAGGGAAGCAATCGAGATTCATAGCAATGGCTGGGAAAGAAGTTCGGGAATACACCAATCTCTCCGACCCAAAAGGTACCCACATTAAATTATTATACTGCAGCTTTGATCCTTGTTCTTATTTTTGTTTTTCTGAGCCGCCATTCCCATTGCTGTTTATAATTGCAGACAAGAAGTGGGGTAAAGGGAAGGATAAAATAGACGATGAAGATATTACGTTTCAACGGATGGTTGCGAAGTTAATACCTGTTATAAATGGCAGAGTGACATTGCTGCCACGATCTACCGAGATCAGCCCTTCGGATCTTGGCTTTTCTTACCGGGTGGCTGATACAAGCAGATGCAAGAGGTTGCAGGAGAACGTGGAGGTTACCTTCATGGACGAGGCGCCTTGGACAGTGATGATTTGCTCTATCTTAAGGAGCAGATGGAAGCAGAGGAGGATGCAGAGCGCCTCCTTAGACGCACTGAGAAACGAGCCTTTGCAGCATTCAAGATATCCTTTTTCATTATGGAACTTTTTGGCTGATTCTGCACCTGCATCTGTTCCCTTGGCGCTTCGTGTTGAGCCAAAGCCAAAGAGTGGAATCAGGTCTCTGTCTGTACGCCACCTTATGATTGCACCCCCCATTACGCTTTTAATGTTTTCTAATGAATCAGGCTGGTTGCCTCTGCCTGTGTACTTCACTCATATATGTGATCAATGCTTTCTCGATTGCAGACAGCAAGATCTATTGAAAAGAGTAGTGGAAGTTAAACCCAAAAGGCCTAGAGTTTCAAATCAAGCAGATTTATCAAATCCCAAGCATGACATTGACAATGAAAAGGTGAAAGAGAACCCCTTACTGAAAACAAGCAAAACTGAAGGCGAAACAGAAGCTGAAAATCCTGTCAAGAGTTTACTAGGTTTGGCATATGCTAGTTCTGATGATGAAGACGAA

Coding sequence (CDS)

GAGTTATGGGCCTTTACTGAAAAGCCCGATAATTTTGGGGCACAGTGCGTTGAGCCCAAATCCAAATTACCCTTCTGGAAGATTCATCGCTCGTTTGCTTCCCTCACACGAACGCAAACGCAATCGCAATTCGAAGGGAAGCAATCGAGATTCATAGCAATGGCTGGGAAAGAAGTTCGGGAATACACCAATCTCTCCGACCCAAAAGGTACCCACATTAAATTATTATACTGCAGCTTTGATCCTTGTTCTTATTTTTGTTTTTCTGAGCCGCCATTCCCATTGCTGTTTATAATTGCAGACAAGAAGTGGGGTAAAGGGAAGGATAAAATAGACGATGAAGATATTACGTTTCAACGGATGGTTGCGAAGTTAATACCTGTTATAAATGGCAGAGTGACATTGCTGCCACGATCTACCGAGATCAGCCCTTCGGATCTTGGCTTTTCTTACCGGGTGGCTGATACAAGCAGATGCAAGAGGTTGCAGGAGAACGTGGAGGTTACCTTCATGGACGAGGCGCCTTGGACAGTGATGATTTGCTCTATCTTAAGGAGCAGATGGAAGCAGAGGAGGATGCAGAGCGCCTCCTTAGACGCACTGAGAAACGAGCCTTTGCAGCATTCAAGATATCCTTTTTCATTATGGAACTTTTTGGCTGATTCTGCACCTGCATCTGTTCCCTTGGCGCTTCGTGTTGAGCCAAAGCCAAAGAGTGGAATCAGGTCTCTGTCTGTACGCCACCTTATGATTGCACCCCCCATTACGCTTTTAATGTTTTCTAATGAATCAGGCTGGTTGCCTCTGCCTGTGTACTTCACTCATATATGTGATCAATGCTTTCTCGATTGCAGACAGCAAGATCTATTGAAAAGAGTAGTGGAAGTTAAACCCAAAAGGCCTAGAGTTTCAAATCAAGCAGATTTATCAAATCCCAAGCATGACATTGACAATGAAAAGGTGAAAGAGAACCCCTTACTGAAAACAAGCAAAACTGAAGGCGAAACAGAAGCTGAAAATCCTGTCAAGAGTTTACTAGGTTTGGCATATGCTAGTTCTGATGATGAAGACGAA

Protein sequence

ELWAFTEKPDNFGAQCVEPKSKLPFWKIHRSFASLTRTQTQSQFEGKQSRFIAMAGKEVREYTNLSDPKGTHIKLLYCSFDPCSYFCFSEPPFPLLFIIADKKWGKGKDKIDDEDITFQRMVAKLIPVINGRVTLLPRSTEISPSDLGFSYRVADTSRCKRLQENVEVTFMDEAPWTVMICSILRSRWKQRRMQSASLDALRNEPLQHSRYPFSLWNFLADSAPASVPLALRVEPKPKSGIRSLSVRHLMIAPPITLLMFSNESGWLPLPVYFTHICDQCFLDCRQQDLLKRVVEVKPKRPRVSNQADLSNPKHDIDNEKVKENPLLKTSKTEGETEAENPVKSLLGLAYASSDDEDE

Homology

[Close]

BLAST of Lsi02G000540 vs. ExPASy TrEMBL
Match: A0A5D3BHW1 (Ankyrin repeat domain-containing protein 50 isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00690 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 1.7e-90
Identity = 200/308 (64.94%), Postives = 209/308 (67.86%), Query Frame = 0


Query: 54  MAGKEVREYTNLSDPKGTHIKLLYCSFDPCSYFCFSEPPFPLLFIIADKKWGKGKDKIDD 113
           MAGKEVREYTNLSDPK                               DKKWGKGKDKIDD
Sbjct: 1   MAGKEVREYTNLSDPK-------------------------------DKKWGKGKDKIDD 60

Query: 114 EDITFQRMVAKLIPVINGRVTLLPRSTEISPSDLGFSYRVADTSRCKRLQENVEVTFMDE 173
           EDITFQRMVAK +PV +     L         DLGFSYRVADTSRCKRLQENVEVTFMDE
Sbjct: 61  EDITFQRMVAK-VPVPSNWFPDL-------QLDLGFSYRVADTSRCKRLQENVEVTFMDE 120

Query: 174 APWTVMICSILRSRWKQRRMQSASLDALRNEPLQHSRYPFSLWN---FLADSAPASVPLA 233
           APWTVMICSILRSRWK+RRMQSASLDALRNEPLQHSRYPF +      LADSAPASVPLA
Sbjct: 121 APWTVMICSILRSRWKRRRMQSASLDALRNEPLQHSRYPFFIMKTSASLADSAPASVPLA 180

Query: 234 LRVEPKPKSGIRSLSVRHLMIAPPITLLMFSNESGWLPLPVYFTHICDQCFLDCRQQDLL 293
           LRVEPKPKSGI                                           RQQDLL
Sbjct: 181 LRVEPKPKSGI-------------------------------------------RQQDLL 226

Query: 294 KRVVEVKPKRPRVSNQADLSNPKHDIDNEKVKENPLLKTSKTEGETEAENPVKSLLGLAY 353
           KRVVEVKPKRPRVSN +DLSNPKHD +N+KVKENPL+KT+KTEGETEAENPVKSLLGLAY
Sbjct: 241 KRVVEVKPKRPRVSNLSDLSNPKHDNNNDKVKENPLVKTNKTEGETEAENPVKSLLGLAY 226

Query: 354 ASSDDEDE 359
           ASSDDEDE
Sbjct: 301 ASSDDEDE 226

[Close]

BLAST of Lsi02G000540 vs. ExPASy TrEMBL
Match: A0A7N2MS83 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 8.3e-53
Identity = 151/343 (44.02%), Postives = 174/343 (50.73%), Query Frame = 0


Query: 54  MAGKEVREYTNLSDPKGTHIKLLYCSFDPCSYFCFSEPPFPLLFIIADKKWGKGKDKIDD 113
           MAG+EVREYTNL+DPK                               DKKWGKGK+KIDD
Sbjct: 1   MAGREVREYTNLTDPK-------------------------------DKKWGKGKEKIDD 60

Query: 114 EDITFQRMVAKLIPVINGRVTLLPRSTEISPSDLGFSYRVADTSRCKRLQENVEVTFMDE 173
           ED TFQRMVAK       +  L+         DLGF YR  D S+CKRLQE+VE TFM E
Sbjct: 61  EDTTFQRMVAKF---RRDQFILVDAMGYCEIRDLGFLYRAVDASKCKRLQESVEATFMGE 120

Query: 174 APWTVMICSILRSRWKQRRMQSASLDALRNEPLQHSRYPFSL--------WNF------- 233
           APWTVMI SI RS+WK RRMQ+ S   LRN  L   RYPF L        ++F       
Sbjct: 121 APWTVMIYSISRSKWKLRRMQNTSYVELRNGHLLCLRYPFMLLKEGEYCCFSFSSLTNGH 180

Query: 234 ----LADSAPASVPLALRVEPKPKSGIRSLSVRHLMIAPPITLLMFSNESGWLPLPVYFT 293
               LADS+PASVPL LRVEPKPKSGI                                 
Sbjct: 181 KAASLADSSPASVPLPLRVEPKPKSGI--------------------------------- 240

Query: 294 HICDQCFLDCRQQDLLKRVVEVKPKRPRVSNQAD------------LSNPKHDIDNEK-- 353
                     RQQ LLK+VVE+KPKR R S+ +D            L + K +   EK  
Sbjct: 241 ----------RQQYLLKKVVEIKPKRKRTSSPSDGNQSTPASNDSALKSLKSESHQEKEQ 266

Query: 354 ------VKENPLLKTSKTEGETEAENPVKSLLGLAYASSDDED 358
                  KE PL + +K EG+T  ENPVKSLLGLAYASS+D+D
Sbjct: 301 PETDQEEKEWPLSRLNKAEGDTNTENPVKSLLGLAYASSEDDD 266

[Close]

BLAST of Lsi02G000540 vs. ExPASy TrEMBL
Match: A0A7N2REZ9 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.1e-52
Identity = 155/351 (44.16%), Postives = 179/351 (51.00%), Query Frame = 0


Query: 54  MAGKEVREYTNLSDPKGTHIKLLYCSFDPCSYFCFSEPPFPLLFIIADKKWGKGKDKIDD 113
           MAG+EVREYTNL+DPK                               DKKWGKGK+KIDD
Sbjct: 1   MAGREVREYTNLTDPK-------------------------------DKKWGKGKEKIDD 60

Query: 114 EDITFQRMVAK------LIPVINGR--VTLLPRSTEISPSDLGFSYRVADTSRCKRLQEN 173
           ED TFQRMVAK       +  + G   +T L R       +LGF YR  D SRCKRLQE+
Sbjct: 61  EDTTFQRMVAKFRFFCSFVQNLEGSFLITCLGR-------NLGFLYRAVDASRCKRLQES 120

Query: 174 VEVTFMDEAPWTVMICSILRSRWKQRRMQSASLDALRNEPLQHSRYPF------------ 233
           VE TFM EAPWTVMI SI RS+WK RRMQ+AS   LRN  L   RYPF            
Sbjct: 121 VEATFMGEAPWTVMIYSISRSKWKLRRMQNASYVELRNGHLLRLRYPFVLLKEGEYCCFS 180

Query: 234 -SLWN-----FLADSAPASVPLALRVEPKPKSGIRSLSVRHLMIAPPITLLMFSNESGWL 293
            SL N      LADS+PASVPL LRVEPKPKSGI                          
Sbjct: 181 SSLTNGHKAASLADSSPASVPLPLRVEPKPKSGI-------------------------- 240

Query: 294 PLPVYFTHICDQCFLDCRQQDLLKRVVEVKPKRPRVSNQAD------------LSNPKHD 353
                            RQQ LLK+VVE+KPKR R S+ +D            L + K +
Sbjct: 241 -----------------RQQYLLKKVVEIKPKRKRTSSPSDGNQSTPASNDSALKSLKSE 270

Query: 354 IDNEK--------VKENPLLKTSKTEGETEAENPVKSLLGLAYASSDDEDE 359
              EK         KE PL + +K EG+T  ENPVKSLLGLAYASS+D+++
Sbjct: 301 SHQEKEQPETDREEKEWPLSRLNKAEGDTNMENPVKSLLGLAYASSEDDED 270

[Close]

BLAST of Lsi02G000540 vs. ExPASy TrEMBL
Match: A0A5A7T1G4 (Ankyrin repeat domain-containing protein 50 isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold112G00590 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 6.0e-51
Identity = 145/305 (47.54%), Postives = 159/305 (52.13%), Query Frame = 0


Query: 54  MAGKEVREYTNLSDPKGTHIKLLYCSFDPCSYFCFSEPPFPLLFIIADKKWGKGKDKIDD 113
           MAGKEVREYTNLSDPK                               DKKWGKGKDKIDD
Sbjct: 1   MAGKEVREYTNLSDPK-------------------------------DKKWGKGKDKIDD 60

Query: 114 EDITFQRMVAKLIPVINGRVTLLPRSTEISPSDLGFSYRVADTSRCKRLQENVEVTFMDE 173
           EDITFQRMVAK+  V   R   L     +   DL +            L+E +E     E
Sbjct: 61  EDITFQRMVAKMQEVAGERGGYLHGRGALDSDDLLY------------LKEQMEAEEDAE 120

Query: 174 APWTVMICSILRSRWKQRRMQSASLDALRNEPLQHSRYPFSLWNFLADSAPASVPLALRV 233
                     L  R ++R   +  +     E            NFLADSAPASVPLALRV
Sbjct: 121 R---------LLRRTEKRAFAAFKISFFHYE------------NFLADSAPASVPLALRV 180

Query: 234 EPKPKSGIRSLSVRHLMIAPPITLLMFSNESGWLPLPVYFTHICDQCFLDCRQQDLLKRV 293
           EPKPKSGI                                           RQQDLLKRV
Sbjct: 181 EPKPKSGI-------------------------------------------RQQDLLKRV 198

Query: 294 VEVKPKRPRVSNQADLSNPKHDIDNEKVKENPLLKTSKTEGETEAENPVKSLLGLAYASS 353
           VEVKPKRPRVSN +DLSNPKHD +N+KVKENPL+KT+KTEGETEAENPVKSLLGLAYASS
Sbjct: 241 VEVKPKRPRVSNLSDLSNPKHDNNNDKVKENPLVKTNKTEGETEAENPVKSLLGLAYASS 198

Query: 354 DDEDE 359
           DDEDE
Sbjct: 301 DDEDE 198

[Close]

BLAST of Lsi02G000540 vs. ExPASy TrEMBL
Match: A0A0A0LQC3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G032480 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 7.3e-49
Identity = 142/305 (46.56%), Postives = 158/305 (51.80%), Query Frame = 0


Query: 54  MAGKEVREYTNLSDPKGTHIKLLYCSFDPCSYFCFSEPPFPLLFIIADKKWGKGKDKIDD 113
           MAGKEVREYTNLSDPK                               DKKWGKGKDKIDD
Sbjct: 1   MAGKEVREYTNLSDPK-------------------------------DKKWGKGKDKIDD 60

Query: 114 EDITFQRMVAKLIPVINGRVTLLPRSTEISPSDLGFSYRVADTSRCKRLQENVEVTFMDE 173
           EDITFQRMVAK+  V   R   L     +   DL +            L+E +E    +E
Sbjct: 61  EDITFQRMVAKMQEVAGERGGYLHGRGALDSDDLLY------------LKEQMEA---EE 120

Query: 174 APWTVMICSILRSRWKQRRMQSASLDALRNEPLQHSRYPFSLWNFLADSAPASVPLALRV 233
               ++           RR +  +  A +                LADSAPASVPLALRV
Sbjct: 121 DAERLL-----------RRTEKRAFAAFKKAA------------SLADSAPASVPLALRV 180

Query: 234 EPKPKSGIRSLSVRHLMIAPPITLLMFSNESGWLPLPVYFTHICDQCFLDCRQQDLLKRV 293
           EPKPKSGI                                           RQQDLLKRV
Sbjct: 181 EPKPKSGI-------------------------------------------RQQDLLKRV 193

Query: 294 VEVKPKRPRVSNQADLSNPKHDIDNEKVKENPLLKTSKTEGETEAENPVKSLLGLAYASS 353
           VEVKPKRPRVSNQADLSNPKHD DNEKVKE PL+KT+KTEGETEAENPVKSLLGLAYASS
Sbjct: 241 VEVKPKRPRVSNQADLSNPKHDNDNEKVKEKPLVKTNKTEGETEAENPVKSLLGLAYASS 193

Query: 354 DDEDE 359
           DD+++
Sbjct: 301 DDDED 193

[Close]

BLAST of Lsi02G000540 vs. NCBI nr
Match: TYJ98873.1 (Ankyrin repeat domain-containing protein 50 isoform 1 [Cucumis melo var. makuwa])

HSP 1 Score: 342.8 bits (878), Expect = 3.5e-90
Identity = 200/308 (64.94%), Postives = 209/308 (67.86%), Query Frame = 0


Query: 54  MAGKEVREYTNLSDPKGTHIKLLYCSFDPCSYFCFSEPPFPLLFIIADKKWGKGKDKIDD 113
           MAGKEVREYTNLSDPK                               DKKWGKGKDKIDD
Sbjct: 1   MAGKEVREYTNLSDPK-------------------------------DKKWGKGKDKIDD 60

Query: 114 EDITFQRMVAKLIPVINGRVTLLPRSTEISPSDLGFSYRVADTSRCKRLQENVEVTFMDE 173
           EDITFQRMVAK +PV +     L         DLGFSYRVADTSRCKRLQENVEVTFMDE
Sbjct: 61  EDITFQRMVAK-VPVPSNWFPDL-------QLDLGFSYRVADTSRCKRLQENVEVTFMDE 120

Query: 174 APWTVMICSILRSRWKQRRMQSASLDALRNEPLQHSRYPFSLWN---FLADSAPASVPLA 233
           APWTVMICSILRSRWK+RRMQSASLDALRNEPLQHSRYPF +      LADSAPASVPLA
Sbjct: 121 APWTVMICSILRSRWKRRRMQSASLDALRNEPLQHSRYPFFIMKTSASLADSAPASVPLA 180

Query: 234 LRVEPKPKSGIRSLSVRHLMIAPPITLLMFSNESGWLPLPVYFTHICDQCFLDCRQQDLL 293
           LRVEPKPKSGI                                           RQQDLL
Sbjct: 181 LRVEPKPKSGI-------------------------------------------RQQDLL 226

Query: 294 KRVVEVKPKRPRVSNQADLSNPKHDIDNEKVKENPLLKTSKTEGETEAENPVKSLLGLAY 353
           KRVVEVKPKRPRVSN +DLSNPKHD +N+KVKENPL+KT+KTEGETEAENPVKSLLGLAY
Sbjct: 241 KRVVEVKPKRPRVSNLSDLSNPKHDNNNDKVKENPLVKTNKTEGETEAENPVKSLLGLAY 226

Query: 354 ASSDDEDE 359
           ASSDDEDE
Sbjct: 301 ASSDDEDE 226

[Close]

BLAST of Lsi02G000540 vs. NCBI nr
Match: KAA0036066.1 (Ankyrin repeat domain-containing protein 50 isoform 1 [Cucumis melo var. makuwa])

HSP 1 Score: 211.5 bits (537), Expect = 1.2e-50
Identity = 145/305 (47.54%), Postives = 159/305 (52.13%), Query Frame = 0


Query: 54  MAGKEVREYTNLSDPKGTHIKLLYCSFDPCSYFCFSEPPFPLLFIIADKKWGKGKDKIDD 113
           MAGKEVREYTNLSDPK                               DKKWGKGKDKIDD
Sbjct: 1   MAGKEVREYTNLSDPK-------------------------------DKKWGKGKDKIDD 60

Query: 114 EDITFQRMVAKLIPVINGRVTLLPRSTEISPSDLGFSYRVADTSRCKRLQENVEVTFMDE 173
           EDITFQRMVAK+  V   R   L     +   DL +            L+E +E     E
Sbjct: 61  EDITFQRMVAKMQEVAGERGGYLHGRGALDSDDLLY------------LKEQMEAEEDAE 120

Query: 174 APWTVMICSILRSRWKQRRMQSASLDALRNEPLQHSRYPFSLWNFLADSAPASVPLALRV 233
                     L  R ++R   +  +     E            NFLADSAPASVPLALRV
Sbjct: 121 R---------LLRRTEKRAFAAFKISFFHYE------------NFLADSAPASVPLALRV 180

Query: 234 EPKPKSGIRSLSVRHLMIAPPITLLMFSNESGWLPLPVYFTHICDQCFLDCRQQDLLKRV 293
           EPKPKSGI                                           RQQDLLKRV
Sbjct: 181 EPKPKSGI-------------------------------------------RQQDLLKRV 198

Query: 294 VEVKPKRPRVSNQADLSNPKHDIDNEKVKENPLLKTSKTEGETEAENPVKSLLGLAYASS 353
           VEVKPKRPRVSN +DLSNPKHD +N+KVKENPL+KT+KTEGETEAENPVKSLLGLAYASS
Sbjct: 241 VEVKPKRPRVSNLSDLSNPKHDNNNDKVKENPLVKTNKTEGETEAENPVKSLLGLAYASS 198

Query: 354 DDEDE 359
           DDEDE
Sbjct: 301 DDEDE 198

[Close]

BLAST of Lsi02G000540 vs. NCBI nr
Match: XP_038895509.1 (uncharacterized protein LOC120083727 [Benincasa hispida])

HSP 1 Score: 207.2 bits (526), Expect = 2.3e-49
Identity = 144/305 (47.21%), Postives = 159/305 (52.13%), Query Frame = 0


Query: 54  MAGKEVREYTNLSDPKGTHIKLLYCSFDPCSYFCFSEPPFPLLFIIADKKWGKGKDKIDD 113
           MAGKEVREYTNLSDPK                               DKKWGKGKDKIDD
Sbjct: 1   MAGKEVREYTNLSDPK-------------------------------DKKWGKGKDKIDD 60

Query: 114 EDITFQRMVAKLIPVINGRVTLLPRSTEISPSDLGFSYRVADTSRCKRLQENVEVTFMDE 173
           EDITFQRMVAK+  V   R   L     +   DL +            L+E +E    +E
Sbjct: 61  EDITFQRMVAKMQEVAGERGGYLHGRGALDSDDLLY------------LKEQMEA---EE 120

Query: 174 APWTVMICSILRSRWKQRRMQSASLDALRNEPLQHSRYPFSLWNFLADSAPASVPLALRV 233
               ++           RR +  +  A +                LADSAPASVPLALRV
Sbjct: 121 DAERLL-----------RRTEKRAFAAFKKAA------------SLADSAPASVPLALRV 180

Query: 234 EPKPKSGIRSLSVRHLMIAPPITLLMFSNESGWLPLPVYFTHICDQCFLDCRQQDLLKRV 293
           EPKPKSGI                                           RQQDLLKRV
Sbjct: 181 EPKPKSGI-------------------------------------------RQQDLLKRV 193

Query: 294 VEVKPKRPRVSNQADLSNPKHDIDNEKVKENPLLKTSKTEGETEAENPVKSLLGLAYASS 353
           VEVKPKRPRVSNQADLSNPKHDID+EKVKE+P +KT+KTEGETEAENPVKSLLGLAYASS
Sbjct: 241 VEVKPKRPRVSNQADLSNPKHDIDDEKVKESPSVKTNKTEGETEAENPVKSLLGLAYASS 193

Query: 354 DDEDE 359
           DDEDE
Sbjct: 301 DDEDE 193

[Close]

BLAST of Lsi02G000540 vs. NCBI nr
Match: XP_004137399.1 (uncharacterized protein LOC101214943 [Cucumis sativus])

HSP 1 Score: 204.5 bits (519), Expect = 1.5e-48
Identity = 142/305 (46.56%), Postives = 158/305 (51.80%), Query Frame = 0


Query: 54  MAGKEVREYTNLSDPKGTHIKLLYCSFDPCSYFCFSEPPFPLLFIIADKKWGKGKDKIDD 113
           MAGKEVREYTNLSDPK                               DKKWGKGKDKIDD
Sbjct: 1   MAGKEVREYTNLSDPK-------------------------------DKKWGKGKDKIDD 60

Query: 114 EDITFQRMVAKLIPVINGRVTLLPRSTEISPSDLGFSYRVADTSRCKRLQENVEVTFMDE 173
           EDITFQRMVAK+  V   R   L     +   DL +            L+E +E    +E
Sbjct: 61  EDITFQRMVAKMQEVAGERGGYLHGRGALDSDDLLY------------LKEQMEA---EE 120

Query: 174 APWTVMICSILRSRWKQRRMQSASLDALRNEPLQHSRYPFSLWNFLADSAPASVPLALRV 233
               ++           RR +  +  A +                LADSAPASVPLALRV
Sbjct: 121 DAERLL-----------RRTEKRAFAAFKKAA------------SLADSAPASVPLALRV 180

Query: 234 EPKPKSGIRSLSVRHLMIAPPITLLMFSNESGWLPLPVYFTHICDQCFLDCRQQDLLKRV 293
           EPKPKSGI                                           RQQDLLKRV
Sbjct: 181 EPKPKSGI-------------------------------------------RQQDLLKRV 193

Query: 294 VEVKPKRPRVSNQADLSNPKHDIDNEKVKENPLLKTSKTEGETEAENPVKSLLGLAYASS 353
           VEVKPKRPRVSNQADLSNPKHD DNEKVKE PL+KT+KTEGETEAENPVKSLLGLAYASS
Sbjct: 241 VEVKPKRPRVSNQADLSNPKHDNDNEKVKEKPLVKTNKTEGETEAENPVKSLLGLAYASS 193

Query: 354 DDEDE 359
           DD+++
Sbjct: 301 DDDED 193

[Close]

BLAST of Lsi02G000540 vs. NCBI nr
Match: XP_008439948.1 (PREDICTED: uncharacterized protein LOC103484557 [Cucumis melo])

HSP 1 Score: 203.8 bits (517), Expect = 2.6e-48
Identity = 142/305 (46.56%), Postives = 158/305 (51.80%), Query Frame = 0


Query: 54  MAGKEVREYTNLSDPKGTHIKLLYCSFDPCSYFCFSEPPFPLLFIIADKKWGKGKDKIDD 113
           MAGKEVREYTNLSDPK                               DKKWGKGKDKIDD
Sbjct: 1   MAGKEVREYTNLSDPK-------------------------------DKKWGKGKDKIDD 60

Query: 114 EDITFQRMVAKLIPVINGRVTLLPRSTEISPSDLGFSYRVADTSRCKRLQENVEVTFMDE 173
           EDITFQRMVAK+  V   R   L     +   DL +            L+E +E    +E
Sbjct: 61  EDITFQRMVAKMQEVAGERGGYLHGRGALDSDDLLY------------LKEQMEA---EE 120

Query: 174 APWTVMICSILRSRWKQRRMQSASLDALRNEPLQHSRYPFSLWNFLADSAPASVPLALRV 233
               ++           RR +  +  A +                LADSAPASVPLALRV
Sbjct: 121 DAERLL-----------RRTEKRAFAAFKKAA------------SLADSAPASVPLALRV 180

Query: 234 EPKPKSGIRSLSVRHLMIAPPITLLMFSNESGWLPLPVYFTHICDQCFLDCRQQDLLKRV 293
           EPKPKSGI                                           RQQDLLKRV
Sbjct: 181 EPKPKSGI-------------------------------------------RQQDLLKRV 193

Query: 294 VEVKPKRPRVSNQADLSNPKHDIDNEKVKENPLLKTSKTEGETEAENPVKSLLGLAYASS 353
           VEVKPKRPRVSN +DLSNPKHD +N+KVKENPL+KT+KTEGETEAENPVKSLLGLAYASS
Sbjct: 241 VEVKPKRPRVSNLSDLSNPKHDNNNDKVKENPLVKTNKTEGETEAENPVKSLLGLAYASS 193

Query: 354 DDEDE 359
           DDEDE
Sbjct: 301 DDEDE 193

[Close]

BLAST of Lsi02G000540 vs. TAIR 10
Match: AT1G73350.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 46 Blast hits to 46 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 3; Plants - 36; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 107.5 bits (267), Expect = 2.3e-23
Identity = 104/324 (32.10%), Postives = 134/324 (41.36%), Query Frame = 0


Query: 54  MAGKEVREYTNLSDPKGTHIKLLYCSFDPCSYFCFSEPPFPLLFIIADKKWGKGKDKIDD 113
           MAG+EV+EYTNLSDPK                               DKK GKG  KIDD
Sbjct: 1   MAGREVKEYTNLSDPK-------------------------------DKKSGKG--KIDD 60

Query: 114 EDITFQRMVAKLIPVINGRVTLLPRSTEISPSDLGFSYRVADTSRCKRLQENVEVTFMDE 173
           ED+TFQRMVAK+               E++    G+ +   D+     L+E +E    +E
Sbjct: 61  EDVTFQRMVAKM--------------QEVAGERGGYLHGRGDSDDLLYLKEQMEA---EE 120

Query: 174 APWTVMICSILRSRWKQRRMQSASLDALRNEPLQHSRYPFSLWNFLADSAPASVPLALRV 233
               ++           RR +  +  A +    Q            ADS+PAS+PL LRV
Sbjct: 121 DAERLL-----------RRTEKRAFAAFKKAATQ------------ADSSPASIPLPLRV 180

Query: 234 EPKPKSGIRSLSVRHLMIAPPITLLMFSNESGWLPLPVYFTHICDQCFLDCRQQDLLKRV 293
           EPKPKSGI                                           RQQDLL++V
Sbjct: 181 EPKPKSGI-------------------------------------------RQQDLLRKV 208

Query: 294 VEVKPKRPRVS--NQADLSNP----------KHDIDNEKVKENPLLKT--------SKTE 353
           VEVKPKRP++S  +   LS P          K   D +K +  P+LK           TE
Sbjct: 241 VEVKPKRPKISTPSSPSLSPPVRSDRGPTEAKVHRDKQKEEAMPVLKKPGADRNDGKATE 208

Query: 354 GETEAENPVKSLLGLAYASSDDED 358
              + +N  K LLGLAY SSD+ED
Sbjct: 301 SNGQGQNAPKGLLGLAYDSSDEED 208

[Close]

BLAST of Lsi02G000540 vs. TAIR 10
Match: AT1G73350.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 50 Blast hits to 50 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 3; Plants - 36; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 107.5 bits (267), Expect = 2.3e-23
Identity = 106/324 (32.72%), Postives = 133/324 (41.05%), Query Frame = 0


Query: 54  MAGKEVREYTNLSDPKGTHIKLLYCSFDPCSYFCFSEPPFPLLFIIADKKWGKGKDKIDD 113
           MAG+EV+EYTNLSDPK                               DKK GKG  KIDD
Sbjct: 1   MAGREVKEYTNLSDPK-------------------------------DKKSGKG--KIDD 60

Query: 114 EDITFQRMVAKLIPVINGRVTLLPRSTEISPSDLGFSYRVADTSRCKRLQENVEVTFMDE 173
           ED+TFQRMVAK+  V   R   L     +   DL +            L+E +E    +E
Sbjct: 61  EDVTFQRMVAKMQEVAGERGGYLHGRGALDSDDLLY------------LKEQMEA---EE 120

Query: 174 APWTVMICSILRSRWKQRRMQSASLDALRNEPLQHSRYPFSLWNFLADSAPASVPLALRV 233
               ++           RR +  +  A +    Q            ADS+PAS+PL LRV
Sbjct: 121 DAERLL-----------RRTEKRAFAAFKKAATQ------------ADSSPASIPLPLRV 180

Query: 234 EPKPKSGIRSLSVRHLMIAPPITLLMFSNESGWLPLPVYFTHICDQCFLDCRQQDLLKRV 293
           EPKPKSGI                                           RQQDLL++V
Sbjct: 181 EPKPKSGI-------------------------------------------RQQDLLRKV 210

Query: 294 VEVKPKRPRVS--NQADLSNP----------KHDIDNEKVKENPLLKT--------SKTE 353
           VEVKPKRP++S  +   LS P          K   D +K +  P+LK           TE
Sbjct: 241 VEVKPKRPKISTPSSPSLSPPVRSDRGPTEAKVHRDKQKEEAMPVLKKPGADRNDGKATE 210

Query: 354 GETEAENPVKSLLGLAYASSDDED 358
              + +N  K LLGLAY SSD+ED
Sbjct: 301 SNGQGQNAPKGLLGLAYDSSDEED 210

[Close]

BLAST of Lsi02G000540 vs. TAIR 10
Match: AT1G73350.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 71.6 bits (174), Expect = 1.4e-12
Identity = 59/158 (37.34%), Postives = 72/158 (45.57%), Query Frame = 0


Query: 220 ADSAPASVPLALRVEPKPKSGIRSLSVRHLMIAPPITLLMFSNESGWLPLPVYFTHICDQ 279
           ADS+PAS+PL LRVEPKPKSGI                                      
Sbjct: 58  ADSSPASIPLPLRVEPKPKSGI-------------------------------------- 117

Query: 280 CFLDCRQQDLLKRVVEVKPKRPRVS--NQADLSNP----------KHDIDNEKVKENPLL 339
                RQQDLL++VVEVKPKRP++S  +   LS P          K   D +K +  P+L
Sbjct: 118 -----RQQDLLRKVVEVKPKRPKISTPSSPSLSPPVRSDRGPTEAKVHRDKQKEEAMPVL 172

Query: 340 KT--------SKTEGETEAENPVKSLLGLAYASSDDED 358
           K           TE   + +N  K LLGLAY SSD+ED
Sbjct: 178 KKPGADRNDGKATESNGQGQNAPKGLLGLAYDSSDEED 172

The following BLAST results are available for this feature:

BLAST of Lsi02G000540 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi02G000540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BHW1	1.7e-90	64.94	Ankyrin repeat domain-containing protein 50 isoform 1 OS=Cucumis melo var. makuw...	[more]
A0A7N2MS83	8.3e-53	44.02	Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]
A0A7N2REZ9	1.1e-52	44.16	Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]
A0A5A7T1G4	6.0e-51	47.54	Ankyrin repeat domain-containing protein 50 isoform 1 OS=Cucumis melo var. makuw...	[more]
A0A0A0LQC3	7.3e-49	46.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G032480 PE=4 SV=1	[more]

BLAST of Lsi02G000540 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ98873.1	3.5e-90	64.94	Ankyrin repeat domain-containing protein 50 isoform 1 [Cucumis melo var. makuwa]	[more]
KAA0036066.1	1.2e-50	47.54	Ankyrin repeat domain-containing protein 50 isoform 1 [Cucumis melo var. makuwa]	[more]
XP_038895509.1	2.3e-49	47.21	uncharacterized protein LOC120083727 [Benincasa hispida]	[more]
XP_004137399.1	1.5e-48	46.56	uncharacterized protein LOC101214943 [Cucumis sativus]	[more]
XP_008439948.1	2.6e-48	46.56	PREDICTED: uncharacterized protein LOC103484557 [Cucumis melo]	[more]

BLAST of Lsi02G000540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G73350.1	2.3e-23	32.10	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G73350.2	2.3e-23	32.72	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G73350.3	1.4e-12	37.34	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 312..338
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 301..358
None	No IPR available	PANTHER	PTHR37202	ANKYRIN REPEAT PROTEIN	coord: 100..136 coord: 218..357

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G000540.1	Lsi02G000540.1	mRNA