Lsi01G018660 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGTTGAAGCAGATTTATTAATGTTCGGGATAGTCCTTATGAAGGAATATCTATCTTTAAACTAGTTGGTCGTCCTATGAGACCAATCAAACAAACAAAAAGGCTAACGATAGAAGAGTGGAGACAAGTCCATCTCTATATTTTAAAGAATTGTGATGATGTCCTCCCATATATTAGGTATGTAAAAGTTCTCTCGTTGATAATTTTTTAAAATATTTTAAAATAGAATATAAAGTAACTTTTTAATTTTTTAGTGAGCACATACAAGGATTGCAACATCTTGATCCTAGAAATGCACCAAGAAAGCATGATAAAGAGTTTGTAGAATGGTTTGAAGATCATGTAAGTGAGAAAAGATAATAGTTACTATATTTATTTATATATACAATTTCTACTCATTCTTAAATATGATATTAAATATGATAGTATTTTCTTTGTAGGTTACTAAATTATATATTGATGGAAGCAATAGAGTTGACAAACAGTTATTAGATTTATCTCAAGGTCCATCACAAGAAGTAACATGCTACAAAGGGTATATTATTAATGGATTTAGATTTCGTATCAAGGATGGTGATGATTTAAGAAAAACACAAAATAGTGGGATAGTAGTGAGAGGAACTGATGATCAAGAGTACTTCGGTGTACTGCATGATATTATTGAATTGCAATATATGGGCGGAAATAAAGCAGTTTTGTTTAAATGTAAATGGTGGAATATCAATAGTCTCGGTAAAGGAATTAGAATTGATGATCATGGACTAACTAGTGTGAATATGATGTACACATTGGCTACAAATGAGCCATTTGTATTAGCATGTTAATCTGAACAAGTTGTTTACCTTGAAGATAGAAGAAATCCGATTTGGTATTTTGTGTTGAAAGTTGATCCAAGAGATTATTACAATATCCCTTTGATCATAGATGAATATTGTCAAGAAGAAGATGACGAAGAAGACGACGATAGAGGAATTTAATTCTTAATTTTTTTTTTGTCTGTCGTTTATGTTAGGTAATCTCTTTTCTAAACTTTATAATATATGATATCTCTTGTTTCTTATACTAATACTCAATTTTTATTATGTTATTTATCTAGCTTTCTTTTTCCAATAAGTTTACTATTTGTGTAAAGGATGAAAAAAATAAGAACGAGATTCAACAACAATAATAGTATAGATAGTCGCGAGAATACTACAATTGCATCTACATCTAATCAAATAGTTGATGATCAACAATCTTCAACGAAATCTAAAGCAAAAGTTGGTTTAGAAGCTTCATCATCATTTACAGGAGAAATTGGATCAACTACTAGTCATGAAAAGTTTCTTAATAGAGGTAACATTTTTTTTTATAATATATATATTATTTATGTTTGATTTGGTACTAACTTACTTTCTCTTCTTCTTTTTTACTTTAGAATCTTCTTCTAGAGAAAGAAGAGTACGTGGTCCCACACGCAATCTCAAACTAGTGAAACTACCTCATGGGATTAGATTTGAAGTATCATGGAATTAAAGATAATGCTGATATCTTTAAAAGCCAATGCACTATCATAGCTAGACAAGTCAACTTTACTCCTTTACAAGTGAAAAGTTGGAGAGATATTGATACAACAATAAAAAAAAAGCTATTTGAGCTTATATNGGAAGAAACGACCAGTTGGAGATAATGCTGATATCTTTAAAAGCCAATGCACTATCATAGCTAGACAAGTCAACTTTACTCCTTTACAAGTGAAAAGTTGGAGAGATATTGATACAACAATAAAAAAAAAGCTATTTGAGCTTATATTGGTATGTGAAAAAATAAATATAGTTTTTTTCTTTAATTTACTTTTTACATAATTATACTACTACTACCATTTTCTTTGCAGGAACAATTTAAAGTTGAAGGTCACGAGACTTCAGTATTGCTTCAAATTCACCGATCTTATAATAATTGGAGAGATAGTTTAAAGAAAAAATGGTTATACAAATAT ATGATTGAGCACATACAAGGATTGCAACATCTTGATCCTAGAAATGCACCAAGAAAGCATGATAAAGAGTTTGTAGAATGGTTTGAAGATCATGTTACTAAATTATATATTGATGGAAGCAATAGAGTTGACAAACAGTTATTAGATTTATCTCAAGGTCCATCACAAGAAGTAACATGCTACAAAGGGTATATTATTAATGGATTTAGATTTCGTATCAAGGATGGTGATGATTTAAGAAAAACACAAAATAGTGGGATAGTAGTGAGAGGAACTGATGATCAAGAGTACTTCGGTGTACTGCATGATATTATTGAATTGCAATATATGGGCGGAAATAAAGCAGTTTTGTTTAAATGTAAATGGTGGAATATCAATAGTCTCGGTAAAGGAATTAGAATTGATGATCATGGACTAACTAGTGTGAATATGATGTACACATTGGCTACAAATGAGCCATTTGTATTAGCATGTTAATCTGAACAAGTTGTTTACCTTGAAGATAGAAGAAATCCGATTTGGTATTTTGTGTTGAAAGTTGATCCAAGAGATTATTACAATATCCCTTTGATCATAGATGAATATTGTCAAGAAGAAGATGACGAAGAAGACGACGATAGAGGAATTTAATTCTTAATTTTTTTTTTGTCTGTCGTTTATGTTAGGATGAAAAAAATAAGAACGAGATTCAACAACAATAATAGTATAGATAGTCGCGAGAATACTACAATTGCATCTACATCTAATCAAATAGTTGATGATCAACAATCTTCAACGAAATCTAAAGCAAAAGTTGGTTTAGAAGCTTCATCATCATTTACAGGAGAAATTGGATCAACTACTAGTCATGAAAAGTTTCTTAATAGAGAATCTTCTTCTAGAGAAAGAAGAGTACGTGGTCCCACACGCAATCTCAAACTAGTGAAACTACCTCATGGGATTAGATTTGAAGTATCATGGAATTAAAGATAATGCTGATATCTTTAAAAGCCAATGCACTATCATAGCTAGACAAGTCAACTTTACTCCTTTACAAGTGAAAAGTTGGAGAGATATTGATACAACAATAAAAAAAAAGCTATTTGAGCTTATATNGGAACAATTTAAAGTTGAAGGTCACGAGACTTCAGTATTGCTTCAAATTCACCGATCTTATAATAATTGGAGAGATAGTTTAAAGAAAAAATGGTTATACAAATAT ATGATTGAGCACATACAAGGATTGCAACATCTTGATCCTAGAAATGCACCAAGAAAGCATGATAAAGAGTTTGTAGAATGGTTTGAAGATCATGTTACTAAATTATATATTGATGGAAGCAATAGAGTTGACAAACAGTTATTAGATTTATCTCAAGGTCCATCACAAGAAGTAACATGCTACAAAGGGTATATTATTAATGGATTTAGATTTCGTATCAAGGATGGTGATGATTTAAGAAAAACACAAAATAGTGGGATAGTAGTGAGAGGAACTGATGATCAAGAGTACTTCGGTGTACTGCATGATATTATTGAATTGCAATATATGGGCGGAAATAAAGCAGTTTTGTTTAAATGTAAATGGTGGAATATCAATAGTCTCGGTAAAGGAATTAGAATTGATGATCATGGACTAACTAGTGTGAATATGATGTACACATTGGCTACAAATGAGCCATTTGTATTAGCATGTTAA MIEHIQGLQHLDPRNAPRKHDKEFVEWFEDHVTKLYIDGSNRVDKQLLDLSQGPSQEVTCYKGYIINGFRFRIKDGDDLRKTQNSGIVVRGTDDQEYFGVLHDIIELQYMGGNKAVLFKCKWWNINSLGKGIRIDDHGLTSVNMMYTLATNEPFVLAC Homology
BLAST of Lsi01G018660 vs. ExPASy TrEMBL
Match: A0A2N9GUI6 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30961 PE=4 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 9.3e-49 Identity = 89/159 (55.97%), Postives = 121/159 (76.10%), Query Frame = 0
BLAST of Lsi01G018660 vs. ExPASy TrEMBL
Match: A0A2N9I4P1 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS46861 PE=4 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 2.6e-43 Identity = 79/146 (54.11%), Postives = 112/146 (76.71%), Query Frame = 0
BLAST of Lsi01G018660 vs. ExPASy TrEMBL
Match: A0A6P5N323 (uncharacterized protein LOC107470678 isoform X2 OS=Arachis duranensis OX=130453 GN=LOC107470678 PE=4 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 2.9e-42 Identity = 76/156 (48.72%), Postives = 114/156 (73.08%), Query Frame = 0
BLAST of Lsi01G018660 vs. ExPASy TrEMBL
Match: A0A6V7QH81 (DUF4216 domain-containing protein OS=Ananas comosus var. bracteatus OX=296719 GN=CB5_LOCUS25725 PE=4 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 1.3e-37 Identity = 76/152 (50.00%), Postives = 107/152 (70.39%), Query Frame = 0
BLAST of Lsi01G018660 vs. ExPASy TrEMBL
Match: A0A6P5ELG2 (uncharacterized protein LOC109705831 isoform X1 OS=Ananas comosus OX=4615 GN=LOC109705831 PE=4 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 2.2e-37 Identity = 75/152 (49.34%), Postives = 107/152 (70.39%), Query Frame = 0
BLAST of Lsi01G018660 vs. NCBI nr
Match: XP_020989473.1 (uncharacterized protein LOC107470678 isoform X2 [Arachis duranensis]) HSP 1 Score: 181.4 bits (459), Expect = 6.0e-42 Identity = 76/156 (48.72%), Postives = 114/156 (73.08%), Query Frame = 0
BLAST of Lsi01G018660 vs. NCBI nr
Match: XP_025646460.1 (uncharacterized protein LOC112741639 [Arachis hypogaea] >XP_025646471.1 uncharacterized protein LOC112741639 [Arachis hypogaea]) HSP 1 Score: 179.1 bits (453), Expect = 3.0e-41 Identity = 76/156 (48.72%), Postives = 113/156 (72.44%), Query Frame = 0
BLAST of Lsi01G018660 vs. NCBI nr
Match: XP_016180369.1 (uncharacterized protein LOC107622839 isoform X2 [Arachis ipaensis] >XP_025683371.1 uncharacterized protein LOC112784405 isoform X2 [Arachis hypogaea]) HSP 1 Score: 177.9 bits (450), Expect = 6.6e-41 Identity = 76/156 (48.72%), Postives = 112/156 (71.79%), Query Frame = 0
BLAST of Lsi01G018660 vs. NCBI nr
Match: XP_020968830.1 (uncharacterized protein LOC107622839 isoform X1 [Arachis ipaensis] >XP_020968831.1 uncharacterized protein LOC107622839 isoform X1 [Arachis ipaensis] >XP_025683369.1 uncharacterized protein LOC112784405 isoform X1 [Arachis hypogaea] >XP_025683370.1 uncharacterized protein LOC112784405 isoform X1 [Arachis hypogaea]) HSP 1 Score: 177.9 bits (450), Expect = 6.6e-41 Identity = 76/156 (48.72%), Postives = 112/156 (71.79%), Query Frame = 0
BLAST of Lsi01G018660 vs. NCBI nr
Match: KAF3956246.1 (hypothetical protein CMV_018610 [Castanea mollissima]) HSP 1 Score: 174.9 bits (442), Expect = 5.6e-40 Identity = 78/159 (49.06%), Postives = 111/159 (69.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
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