Lsi01G018040 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGGGCTTCAATACAACTTCTTTCCCACTGATCTCCTTTACCCTAAACCCTCTTCTTCTGCTTCTTCTTCTTCTTCTTCTTCCTCGGAAGCCATTAATAGGGCAGGTGTGACCTTCAAAACCCCTCTAAGAGGCAACAAAGTTGAAGAAAATGATGATCATGGTGATGAATCCAAGAGCTTGATCATTCAAAAGGCTGATAAATCATCATTGATTCTCAAGCATCAAATCAAGACTTCTTCAACTTTCTAA ATGGCTGGGCTTCAATACAACTTCTTTCCCACTGATCTCCTTTACCCTAAACCCTCTTCTTCTGCTTCTTCTTCTTCTTCTTCTTCCTCGGAAGCCATTAATAGGGCAGGTGTGACCTTCAAAACCCCTCTAAGAGGCAACAAAGTTGAAGAAAATGATGATCATGGTGATGAATCCAAGAGCTTGATCATTCAAAAGGCTGATAAATCATCATTGATTCTCAAGCATCAAATCAAGACTTCTTCAACTTTCTAA ATGGCTGGGCTTCAATACAACTTCTTTCCCACTGATCTCCTTTACCCTAAACCCTCTTCTTCTGCTTCTTCTTCTTCTTCTTCTTCCTCGGAAGCCATTAATAGGGCAGGTGTGACCTTCAAAACCCCTCTAAGAGGCAACAAAGTTGAAGAAAATGATGATCATGGTGATGAATCCAAGAGCTTGATCATTCAAAAGGCTGATAAATCATCATTGATTCTCAAGCATCAAATCAAGACTTCTTCAACTTTCTAA MAGLQYNFFPTDLLYPKPSSSASSSSSSSSEAINRAGVTFKTPLRGNKVEENDDHGDESKSLIIQKADKSSLILKHQIKTSSTF Homology
BLAST of Lsi01G018040 vs. ExPASy TrEMBL
Match: A0A0A0KWJ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G218340 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 1.2e-21 Identity = 64/86 (74.42%), Postives = 71/86 (82.56%), Query Frame = 0
BLAST of Lsi01G018040 vs. ExPASy TrEMBL
Match: A0A5A7V9D3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold258G00320 PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 9.8e-21 Identity = 68/87 (78.16%), Postives = 70/87 (80.46%), Query Frame = 0
BLAST of Lsi01G018040 vs. ExPASy TrEMBL
Match: E5GC02 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 9.8e-21 Identity = 68/87 (78.16%), Postives = 70/87 (80.46%), Query Frame = 0
BLAST of Lsi01G018040 vs. NCBI nr
Match: KAG6603410.1 (hypothetical protein SDJN03_04019, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 117.1 bits (292), Expect = 7.4e-23 Identity = 64/85 (75.29%), Postives = 73/85 (85.88%), Query Frame = 0
BLAST of Lsi01G018040 vs. NCBI nr
Match: KGN53975.1 (hypothetical protein Csa_018873 [Cucumis sativus]) HSP 1 Score: 112.1 bits (279), Expect = 2.4e-21 Identity = 64/86 (74.42%), Postives = 71/86 (82.56%), Query Frame = 0
BLAST of Lsi01G018040 vs. NCBI nr
Match: ADN34001.1 (hypothetical protein [Cucumis melo subsp. melo] >KAA0063834.1 hypothetical protein E6C27_scaffold827G00560 [Cucumis melo var. makuwa] >TYK28218.1 hypothetical protein E5676_scaffold258G00320 [Cucumis melo var. makuwa]) HSP 1 Score: 109.0 bits (271), Expect = 2.0e-20 Identity = 68/87 (78.16%), Postives = 70/87 (80.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
|