Lsi01G017660 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi01G017660
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionR3H domain-containing protein 1-like isoform X1
Locationchr01: 16539193 .. 16541998 (+)
RNA-Seq ExpressionLsi01G017660
SyntenyLsi01G017660
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTCTTCTTCAGCTTCCTCTATTGATGCCTTTCCAGATTGCCTCAAAGACAAAGTCTCAATGGTTGACCCCTTTTTGGTTGAGGCCCTTCACAACCCTCGTCACCGTCTAACCAGTCAGTAATTTCTTTGATTCTAATTTTGGATTTTGATTCAGCTTCAATTTTAGACTCTTGTCTGCTCTGATTGATTGCCCTGTTTCTGGTTATATGACATACTTTAGGTTGAGATTTTGATTTTTATGAGCTTCCAAGAATGGTATGTAATTGTGAATCTGTTGTTGTATTGGTTTAATTCTGAACAAAGGGTTGTAGATTTTGTCCCAATTTTGATGCCCCATACTTAGCTATTGTCTTAGCTTTAATGGGCATTTGCTAGTTTTAGCAAAAACTAAGTGAGATTATGCTTCCATGAAGCTAGAAAGAGAGCCTTGTGGGATGGATTAACTTAGCTACTTTAAGTTTCTTTTTTTTAATATTATGCTTTTGTATCTATTTACTCTGCTGATTGTAGTTTAAATGTTACCTTAGTTCTGCGGATGGAACTCGATATTCAAAGGTTTTTGCAAAACCAAGAGCAGCAGGTGCTTGAGTTCCAACACTTCCCTACTTCGTATCTTCGACTCGCAGCTCATCGTGTTGCTCAACACTACGGTCTGCAAACTATGGTTCAGGATAATGGCATAGATGGACAGGGGAGGATTTTGGTGAGGAAAACTGTTGAAGCTAGATTCCCGACCGTTTGCTTATCTCAAATACCTGCGAAACAATCGGCTGATGATAAACCTGGGCACGTTAAAATTGCTATTAGGCCAAGGCCGAGTAAGTCATCTGATGATGCAGGTAATTGTATGGCTAAGCAAAGTCTCGGTAGGAGTGTGGAGCAGAGGAAGGAAGAGTACGATAAGGCACGTGCTCGAATATTCAGCAGCCAGGGCAGTAATGGTTCAGTGGATGTATTGTCCCATGCTTTCACTGAAGGGCTGGATATATCCCCTAACAGAGATAGGGCGGAAGAGTGTAGAGTGAACGATGTAGAGAAGTATACAAGTATCAAAGATGCCGGGAATGTGGCGTCTTCTCGGGTTGCCATTTTTAGAGATAGGGAAAAGGATCTTAGTGACCCGGATTATGATCGGAGTTATGAAAGGTAATGCCTCATTTGACTTTGAATGTGGACTTGGTGTACACCTATGCTGCTAGCTAATTATACCATTATTACATATGCTGTTACTGGTTTTTCCCTATATGCTGAGACCATTTTAGCTATAAGTTTTTTGAACATCCATTCTTATCGGAGCTTATTATATTTGTTATGTGATGTATTATCTGAATGGTTGGGTATTTAAATGCATATTAATCAGAAACTTGTTCTTCATTTGTAGGTATGTTAAGAGCCTTCCAATTAATCTGACTCCGAGCATGAATTTTGCTCCTTTCACCGTGCAAAACATCCCACCTTCATTTACCGGTTACCATGTACCAAGGAACGAGGTTTCGTTGGGCTATATGTCTCCTTCCCCTATCAAAACTGTAGGATTGAATCAGGTATCTAGAACCTCAGCCAATGCGCCGTGGCCATGTGCAGGGATGCCGTACACACATACTGCTTTCCAGGTACATATAAGATTTACAATAGAAAACCTCTGTTTTATCAATTGAATTGATTCAGTAAGAACTGAAAAGTTACATCGCAGAACTCGAGTTCATACTAGTGTTTACAAAATTCACTTCGATCGATCTTGGTTAATCTAGAGAAATTATGGAGTAACTACGAAATGGATTAGGCAAAGAACAACAGAAGGATGAACCTTAGCTAAGTCTGACAACTTCCACCTCTGCTCGATTCTGGTTTTCGTTGAATGTTCTGGAGCTCACTCGATTCAAATACTCCAGAGAGCTGCTTTTGCTACATTTATCCAAAGATCTCTCTCCTTTCCTCCTTGGAATATGGCCTTAAAACAGTTGAATGATGTTCTCCTTTGCTTTTTTCCCCCAAAGATTAGAACACTTGAACTTGTTCCTTCTCACCAATCCTACTATAACATTAACAGCAACGGAAGAATAGATGTTAGATTTTTTGCTCTTGCCCCACGACATAAAACGCGCCAATTTGGTTGAAAAGATGTATTCGGTATAGGACATCTCTGATGAATTCATTGTTGTTCCAAAATTCATTTTAAAAAACAACCCTTCCGAAAACAAAGAAATTTGTCTGGAAACCTATCTTCCAATCGTTTTATCTTTTTCATGGTTGATTAGTGTTCCCACGTTCTACCCGCTCGCTTATTCTACGTCGTTAGTAGAGATCTATCAATTGTTTCCTTATCTTTTAACTCGAGATGTCTTAAATGGAAGCTACAATCATATTCATTGAAACTTTTGTTGATTTTTGTTCTAAAAACCGATATTAGAAATTTTCTAAACCAAACCTACAACTACTCTTTCTCTTTTACGGTCGGATTCATTAAGATTTTCGCCTCCTACCCTCCTTGTTCTACGTCTTTAGTAGAGAAATATCAACTATTTTCTCTCTAAATCTTGTTTGTACAAACCTCATTTGATTTTTATTTTTTCTTCAATTCTTGCAATTAGTTTGAGTTGACTTAGTTCTGTTGTTCTTGCAGGCTCCATTGTACCAACAGTCTTTGAGTTTTGATTATCTGCGATACAATTGAATACAGCAGTTAGTTAGGGGATAGTGTTAATTAAAACTGATTTACTCAGCTAATTATATACTGACTTTGTTGGTTCTGAAACCTCCAATTATAATCAATTATTTTAAATTAAGCTCTTTTATTTATA

mRNA sequence

ATGGATTCTTCTTCAGCTTCCTCTATTGATGCCTTTCCAGATTGCCTCAAAGACAAAGTCTCAATGGTTGACCCCTTTTTGGTTGAGGCCCTTCACAACCCTCGTCACCGTCTAACCAGTCATTTAAATGTTACCTTAGTTCTGCGGATGGAACTCGATATTCAAAGGTTTTTGCAAAACCAAGAGCAGCAGGTGCTTGAGTTCCAACACTTCCCTACTTCGTATCTTCGACTCGCAGCTCATCGTGTTGCTCAACACTACGGTCTGCAAACTATGGTTCAGGATAATGGCATAGATGGACAGGGGAGGATTTTGGTGAGGAAAACTGTTGAAGCTAGATTCCCGACCGTTTGCTTATCTCAAATACCTGCGAAACAATCGGCTGATGATAAACCTGGGCACGTTAAAATTGCTATTAGGCCAAGGCCGAGTAAGTCATCTGATGATGCAGGTAATTGTATGGCTAAGCAAAGTCTCGGTAGGAGTGTGGAGCAGAGGAAGGAAGAGTACGATAAGGCACGTGCTCGAATATTCAGCAGCCAGGGCAGTAATGGTTCAGTGGATGTATTGTCCCATGCTTTCACTGAAGGGCTGGATATATCCCCTAACAGAGATAGGGCGGAAGAGTGTAGAGTGAACGATGTAGAGAAGTATACAAGTATCAAAGATGCCGGGAATGTGGCGTCTTCTCGGGTTGCCATTTTTAGAGATAGGGAAAAGGATCTTAGTGACCCGGATTATGATCGGAGTTATGAAAGGTATGTTAAGAGCCTTCCAATTAATCTGACTCCGAGCATGAATTTTGCTCCTTTCACCGTGCAAAACATCCCACCTTCATTTACCGGTTACCATGTACCAAGGAACGAGGTTTCGTTGGGCTATATGTCTCCTTCCCCTATCAAAACTGTAGGATTGAATCAGGTATCTAGAACCTCAGCCAATGCGCCGTGGCCATGTGCAGGGATGCCGTACACACATACTGCTTTCCAGAGAGCTGCTTTTGCTACATTTATCCAAAGATCTCTCTCCTTTCCTCCTTGGAATATGGCCTTAAAACAGTTGAATGATGTTCTCCTTTGCTTTTTTCCCCCAAAGATTAGAACACTTGAACTTGTTCCTTCTCACCAATCCTACTATAACATTAACAGCAACGGAAGAATAGATGACATCTCTGATGAATTCATTGTTGTTCCAAAATTCATTTTAAAAAACAACCCTTCCGAAAACAAAGAAATTTGTCTGGAAACCTATCTTCCAATCGTTTTATCTTTTTCATGGTTGATTAGTGTTCCCACGTTCTACCCGCTCGCTTATTCTACGTCGTTAGTAGAGATCTATCAATTGTTTCCTTATCTTTTAACTCGAGATGCTCCATTGTACCAACAGTCTTTGAGTTTTGATTATCTGCGATACAATTGAATACAGCAGTTAGTTAGGGGATAGTGTTAATTAAAACTGATTTACTCAGCTAATTATATACTGACTTTGTTGGTTCTGAAACCTCCAATTATAATCAATTATTTTAAATTAAGCTCTTTTATTTATA

Coding sequence (CDS)

ATGGATTCTTCTTCAGCTTCCTCTATTGATGCCTTTCCAGATTGCCTCAAAGACAAAGTCTCAATGGTTGACCCCTTTTTGGTTGAGGCCCTTCACAACCCTCGTCACCGTCTAACCAGTCATTTAAATGTTACCTTAGTTCTGCGGATGGAACTCGATATTCAAAGGTTTTTGCAAAACCAAGAGCAGCAGGTGCTTGAGTTCCAACACTTCCCTACTTCGTATCTTCGACTCGCAGCTCATCGTGTTGCTCAACACTACGGTCTGCAAACTATGGTTCAGGATAATGGCATAGATGGACAGGGGAGGATTTTGGTGAGGAAAACTGTTGAAGCTAGATTCCCGACCGTTTGCTTATCTCAAATACCTGCGAAACAATCGGCTGATGATAAACCTGGGCACGTTAAAATTGCTATTAGGCCAAGGCCGAGTAAGTCATCTGATGATGCAGGTAATTGTATGGCTAAGCAAAGTCTCGGTAGGAGTGTGGAGCAGAGGAAGGAAGAGTACGATAAGGCACGTGCTCGAATATTCAGCAGCCAGGGCAGTAATGGTTCAGTGGATGTATTGTCCCATGCTTTCACTGAAGGGCTGGATATATCCCCTAACAGAGATAGGGCGGAAGAGTGTAGAGTGAACGATGTAGAGAAGTATACAAGTATCAAAGATGCCGGGAATGTGGCGTCTTCTCGGGTTGCCATTTTTAGAGATAGGGAAAAGGATCTTAGTGACCCGGATTATGATCGGAGTTATGAAAGGTATGTTAAGAGCCTTCCAATTAATCTGACTCCGAGCATGAATTTTGCTCCTTTCACCGTGCAAAACATCCCACCTTCATTTACCGGTTACCATGTACCAAGGAACGAGGTTTCGTTGGGCTATATGTCTCCTTCCCCTATCAAAACTGTAGGATTGAATCAGGTATCTAGAACCTCAGCCAATGCGCCGTGGCCATGTGCAGGGATGCCGTACACACATACTGCTTTCCAGAGAGCTGCTTTTGCTACATTTATCCAAAGATCTCTCTCCTTTCCTCCTTGGAATATGGCCTTAAAACAGTTGAATGATGTTCTCCTTTGCTTTTTTCCCCCAAAGATTAGAACACTTGAACTTGTTCCTTCTCACCAATCCTACTATAACATTAACAGCAACGGAAGAATAGATGACATCTCTGATGAATTCATTGTTGTTCCAAAATTCATTTTAAAAAACAACCCTTCCGAAAACAAAGAAATTTGTCTGGAAACCTATCTTCCAATCGTTTTATCTTTTTCATGGTTGATTAGTGTTCCCACGTTCTACCCGCTCGCTTATTCTACGTCGTTAGTAGAGATCTATCAATTGTTTCCTTATCTTTTAACTCGAGATGCTCCATTGTACCAACAGTCTTTGAGTTTTGATTATCTGCGATACAATTGA

Protein sequence

MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVRKTVEARFPTVCLSQIPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAKQSLGRSVEQRKEEYDKARARIFSSQGSNGSVDVLSHAFTEGLDISPNRDRAEECRVNDVEKYTSIKDAGNVASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLGYMSPSPIKTVGLNQVSRTSANAPWPCAGMPYTHTAFQRAAFATFIQRSLSFPPWNMALKQLNDVLLCFFPPKIRTLELVPSHQSYYNINSNGRIDDISDEFIVVPKFILKNNPSENKEICLETYLPIVLSFSWLISVPTFYPLAYSTSLVEIYQLFPYLLTRDAPLYQQSLSFDYLRYN
Homology
BLAST of Lsi01G017660 vs. ExPASy Swiss-Prot
Match: Q15032 (R3H domain-containing protein 1 OS=Homo sapiens OX=9606 GN=R3HDM1 PE=1 SV=3)

HSP 1 Score: 62.4 bits (150), Expect = 1.6e-08
Identity = 65/226 (28.76%), Postives = 101/226 (44.69%), Query Frame = 0

Query: 26  FLVEAL-HNPRHRLTSHLNVTLVLRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVA 85
           FLV  L +NPR R+       ++L++E +I  F+ N E    +F    TSY R+  HRVA
Sbjct: 156 FLVNTLKNNPRDRM-------MLLKLEQEILDFIGNNESPRKKFPPM-TSYHRMLLHRVA 215

Query: 86  QHYGLQTMVQDNGIDGQGR-ILVRKTVEARFPTVCLSQIPAKQSADDKPGHVKIAIRPRP 145
            ++GL     D+ +D  G+ ++V KT   R P    ++       +D     K  I  R 
Sbjct: 216 AYFGL-----DHNVDQSGKSVIVNKTSNTRIPDQKFNEHIKDDKGED---FQKRYILKRD 275

Query: 146 SKSSDDAGNCM----AKQSLGRSVEQRKEEYDKARARIFSSQGSNGSVDVLSHAFTEGLD 205
           + S D   N M          +S+E+R+EEY +AR RIFS        + +     +  D
Sbjct: 276 NSSFDKDDNQMRIRLKDDRRSKSIEEREEEYQRARDRIFSQDSLCSQENYIIDKRLQDED 335

Query: 206 ISPNRDRAEECRVNDVEKYTSIKDAGNVASSRVAIFRDREKDLSDP 246
            S  + R +  RVN        KDA   +++      + E   S+P
Sbjct: 336 ASSTQQRRQIFRVN--------KDASGRSTNSHQSSTENELKYSEP 357

BLAST of Lsi01G017660 vs. ExPASy TrEMBL
Match: A0A5D3DFX8 (R3H domain-containing protein 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00310 PE=4 SV=1)

HSP 1 Score: 581.6 bits (1498), Expect = 2.9e-162
Identity = 304/390 (77.95%), Postives = 324/390 (83.08%), Query Frame = 0

Query: 1   MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQN 60
           MDSSSAS IDAFPD LKDKVS+VDPFL+E LHNPRHRLT       +LRMELDIQRFLQN
Sbjct: 1   MDSSSASPIDAFPDGLKDKVSVVDPFLIEVLHNPRHRLT-------ILRMELDIQRFLQN 60

Query: 61  QEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVRKTVEARFPTVCLS 120
           QEQQV EFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILV+KTVEARFPT+CLS
Sbjct: 61  QEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVKKTVEARFPTICLS 120

Query: 121 QIPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAKQSLGRSVEQRKEEYDKARARIFSS 180
           QIPAKQ ADDKPGHVKIA+RP+P+K SDDAGNCMAKQS GR+VEQRKEEYDKARARIFSS
Sbjct: 121 QIPAKQLADDKPGHVKIAVRPKPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFSS 180

Query: 181 QGSNGSVDVLSHAFTEGLDISPNRDRAEECRVNDVEKYTSIKDAGNVASSRVAIFRDREK 240
           Q S+GSVDVLSH  TEGL I PNRDRAE+CRVNDVEKY S  DAGN ASSRVAI RDREK
Sbjct: 181 Q-SSGSVDVLSHTVTEGLGIPPNRDRAEDCRVNDVEKYMSGTDAGNGASSRVAILRDREK 240

Query: 241 DLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLGYMSPSPI 300
           DLSDPDYDRSYERYVKSLPINLTPS+NF PFT QNI PSFTGYHVPRNEV LGY+SPS I
Sbjct: 241 DLSDPDYDRSYERYVKSLPINLTPSLNFPPFTFQNIMPSFTGYHVPRNEVPLGYVSPSQI 300

Query: 301 KTVGLNQVSRTSANAPWPCAGMPYTHTAFQ-------------------------RAAFA 360
           KTVGLNQ+SR+SAN PWPCAGMPY H+AFQ                         + AFA
Sbjct: 301 KTVGLNQMSRSSANVPWPCAGMPYPHSAFQVNHFCLCMNVVFVDCAGACSMKMLCKTAFA 360

Query: 361 TFIQRSLSFPPWNMALKQLNDVLLCFFPPK 366
           TFIQRS   P WN+ +KQL+DVL   F PK
Sbjct: 361 TFIQRSP--PSWNLTVKQLDDVLPLLFYPK 380

BLAST of Lsi01G017660 vs. ExPASy TrEMBL
Match: A0A0A0L247 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G420720 PE=4 SV=1)

HSP 1 Score: 568.9 bits (1465), Expect = 1.9e-158
Identity = 290/344 (84.30%), Postives = 305/344 (88.66%), Query Frame = 0

Query: 1   MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQN 60
           MDSSS SSIDA PD LKDKVS VDPFL+EALHNPRHRLT       +LRMELDIQRFLQN
Sbjct: 1   MDSSSPSSIDALPDGLKDKVSTVDPFLIEALHNPRHRLT-------ILRMELDIQRFLQN 60

Query: 61  QEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVRKTVEARFPTVCLS 120
           Q+QQ+ EFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILV+KTVEARFPT+CLS
Sbjct: 61  QDQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVKKTVEARFPTICLS 120

Query: 121 QIPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAKQSLGRSVEQRKEEYDKARARIFSS 180
           QIPAKQ ADDKPGHVKIAIRPRP+K SD+AGNCMAKQS  R+VEQRKEEYDKARARIFSS
Sbjct: 121 QIPAKQLADDKPGHVKIAIRPRPNKLSDEAGNCMAKQSHARTVEQRKEEYDKARARIFSS 180

Query: 181 QGSNGSVDVLSHAFTEGLDISPNRDRAEECRVNDVEKYTSIKDAGNVASSRVAIFRDREK 240
           QGS G V+VL H   EGL I PNRDR E+CRVNDVEKYTS+ DAGN ASSRVAI RDREK
Sbjct: 181 QGSIGPVEVLPHTVIEGLGIPPNRDRVEDCRVNDVEKYTSVTDAGNGASSRVAILRDREK 240

Query: 241 DLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLGYMSPSPI 300
           DLSDPDYDRSYERYVKSLPINLTPS+NFAPFTVQNI PSFTGYHVPRNEVSLGY+SPSPI
Sbjct: 241 DLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNITPSFTGYHVPRNEVSLGYVSPSPI 300

Query: 301 KTVGLNQVSRTSANAPWPCAGMPYTHTAFQRAAFATFIQRSLSF 345
           KTVGLNQVSR SAN PWPCAGMPY HTAFQ    A   Q+SLSF
Sbjct: 301 KTVGLNQVSRPSANVPWPCAGMPYPHTAFQ----APLYQQSLSF 333

BLAST of Lsi01G017660 vs. ExPASy TrEMBL
Match: A0A5A7SJ76 (R3H domain-containing protein 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G001300 PE=4 SV=1)

HSP 1 Score: 562.8 bits (1449), Expect = 1.4e-156
Identity = 289/344 (84.01%), Postives = 306/344 (88.95%), Query Frame = 0

Query: 1   MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQN 60
           MDSSSAS IDAFPD LKDKVS+VDPFL+E LHNPRHRLT       +LRMELDIQRFLQN
Sbjct: 1   MDSSSASPIDAFPDGLKDKVSVVDPFLIEVLHNPRHRLT-------ILRMELDIQRFLQN 60

Query: 61  QEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVRKTVEARFPTVCLS 120
           QEQQV EFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILV+KTVEARFPT+CLS
Sbjct: 61  QEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVKKTVEARFPTICLS 120

Query: 121 QIPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAKQSLGRSVEQRKEEYDKARARIFSS 180
           QIPAKQ ADDKPGHVKIA+RP+P+K SDDAGNCMAKQS GR+VEQRKEEYDKARARIFSS
Sbjct: 121 QIPAKQLADDKPGHVKIAVRPKPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFSS 180

Query: 181 QGSNGSVDVLSHAFTEGLDISPNRDRAEECRVNDVEKYTSIKDAGNVASSRVAIFRDREK 240
           Q S+GSVDVLSH  TEGL I PNRDRAE+CRVNDVEKY S  DAGN ASSRVAI RDREK
Sbjct: 181 Q-SSGSVDVLSHTVTEGLGIPPNRDRAEDCRVNDVEKYMSGTDAGNGASSRVAILRDREK 240

Query: 241 DLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLGYMSPSPI 300
           DLSDPDYDRSYERYVKSLPINLTPS+NF PFT QNI PSFTGYHVPRNEV LGY+SPS I
Sbjct: 241 DLSDPDYDRSYERYVKSLPINLTPSLNFPPFTFQNIMPSFTGYHVPRNEVPLGYVSPSQI 300

Query: 301 KTVGLNQVSRTSANAPWPCAGMPYTHTAFQRAAFATFIQRSLSF 345
           KTVGLNQ+SR+SAN PWPCAGMPY H+AFQ    A   Q+SLSF
Sbjct: 301 KTVGLNQMSRSSANVPWPCAGMPYPHSAFQ----APLYQQSLSF 332

BLAST of Lsi01G017660 vs. ExPASy TrEMBL
Match: A0A1S3C2A6 (R3H domain-containing protein 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495843 PE=4 SV=1)

HSP 1 Score: 562.8 bits (1449), Expect = 1.4e-156
Identity = 289/344 (84.01%), Postives = 306/344 (88.95%), Query Frame = 0

Query: 1   MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQN 60
           MDSSSAS IDAFPD LKDKVS+VDPFL+E LHNPRHRLT       +LRMELDIQRFLQN
Sbjct: 1   MDSSSASPIDAFPDGLKDKVSVVDPFLIEVLHNPRHRLT-------ILRMELDIQRFLQN 60

Query: 61  QEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVRKTVEARFPTVCLS 120
           QEQQV EFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILV+KTVEARFPT+CLS
Sbjct: 61  QEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVKKTVEARFPTICLS 120

Query: 121 QIPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAKQSLGRSVEQRKEEYDKARARIFSS 180
           QIPAKQ ADDKPGHVKIA+RP+P+K SDDAGNCMAKQS GR+VEQRKEEYDKARARIFSS
Sbjct: 121 QIPAKQLADDKPGHVKIAVRPKPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFSS 180

Query: 181 QGSNGSVDVLSHAFTEGLDISPNRDRAEECRVNDVEKYTSIKDAGNVASSRVAIFRDREK 240
           Q S+GSVDVLSH  TEGL I PNRDRAE+CRVNDVEKY S  DAGN ASSRVAI RDREK
Sbjct: 181 Q-SSGSVDVLSHTVTEGLGIPPNRDRAEDCRVNDVEKYMSGTDAGNGASSRVAILRDREK 240

Query: 241 DLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLGYMSPSPI 300
           DLSDPDYDRSYERYVKSLPINLTPS+NF PFT QNI PSFTGYHVPRNEV LGY+SPS I
Sbjct: 241 DLSDPDYDRSYERYVKSLPINLTPSLNFPPFTFQNIMPSFTGYHVPRNEVPLGYVSPSQI 300

Query: 301 KTVGLNQVSRTSANAPWPCAGMPYTHTAFQRAAFATFIQRSLSF 345
           KTVGLNQ+SR+SAN PWPCAGMPY H+AFQ    A   Q+SLSF
Sbjct: 301 KTVGLNQMSRSSANVPWPCAGMPYPHSAFQ----APLYQQSLSF 332

BLAST of Lsi01G017660 vs. ExPASy TrEMBL
Match: A0A6J1DP27 (R3H domain-containing protein 1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021798 PE=4 SV=1)

HSP 1 Score: 524.2 bits (1349), Expect = 5.5e-145
Identity = 267/331 (80.66%), Postives = 286/331 (86.40%), Query Frame = 0

Query: 14  DCLKDKVSMVDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQNQEQQVLEFQHFPT 73
           D LKDKVSMVDPFLVEAL NPRHRLT       +LRMELDIQ FLQNQEQQ+ EFQHF T
Sbjct: 5   DWLKDKVSMVDPFLVEALQNPRHRLT-------ILRMELDIQMFLQNQEQQLFEFQHFST 64

Query: 74  SYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVRKTVEARFPTVCLSQIPAKQSADDKPG 133
           SYLRLAAHRVAQHYGLQTMVQDN IDGQGRILVRKTVEA+FP +CLSQIPAKQSADD  G
Sbjct: 65  SYLRLAAHRVAQHYGLQTMVQDNAIDGQGRILVRKTVEAKFPPICLSQIPAKQSADDTIG 124

Query: 134 HVKIAIRPRPSKSSDDAGNCMAKQSLGRSVEQRKEEYDKARARIFSSQGSNGSVDVLSHA 193
            VKIA+RPRP+KSSDD   CMAKQ LGR+VEQRKEEYDKARARIFSSQGS GSVDV SH 
Sbjct: 125 RVKIAVRPRPNKSSDDGMGCMAKQGLGRTVEQRKEEYDKARARIFSSQGSTGSVDVSSHN 184

Query: 194 FTEGLDISPNRDRAEECRVNDVEKYTSIKDAGNVASSRVAIFRDREKDLSDPDYDRSYER 253
           FTEGLDIS NRDRAE CRVNDV+KY+SIKDAG+  +SRVAI RDREKDLSDPDYDRSY+R
Sbjct: 185 FTEGLDISTNRDRAEGCRVNDVDKYSSIKDAGSGPTSRVAILRDREKDLSDPDYDRSYDR 244

Query: 254 YVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLGYMSPSPIKTVGLNQVSRTSA 313
           YVK+LPIN TPSMNFAPFT+QNI PSF GYHVPRN+V L Y+SPSPIKTVGLN +SRT+ 
Sbjct: 245 YVKNLPINPTPSMNFAPFTMQNIQPSFPGYHVPRNDVPLSYVSPSPIKTVGLNPISRTTV 304

Query: 314 NAPWPCAGMPYTHTAFQRAAFATFIQRSLSF 345
           N PWPCAGMPYTHTAFQ        Q+SLSF
Sbjct: 305 NVPWPCAGMPYTHTAFQ----VPLYQQSLSF 324

BLAST of Lsi01G017660 vs. NCBI nr
Match: TYK22607.1 (R3H domain-containing protein 1-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 581.6 bits (1498), Expect = 6.0e-162
Identity = 304/390 (77.95%), Postives = 324/390 (83.08%), Query Frame = 0

Query: 1   MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQN 60
           MDSSSAS IDAFPD LKDKVS+VDPFL+E LHNPRHRLT       +LRMELDIQRFLQN
Sbjct: 1   MDSSSASPIDAFPDGLKDKVSVVDPFLIEVLHNPRHRLT-------ILRMELDIQRFLQN 60

Query: 61  QEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVRKTVEARFPTVCLS 120
           QEQQV EFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILV+KTVEARFPT+CLS
Sbjct: 61  QEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVKKTVEARFPTICLS 120

Query: 121 QIPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAKQSLGRSVEQRKEEYDKARARIFSS 180
           QIPAKQ ADDKPGHVKIA+RP+P+K SDDAGNCMAKQS GR+VEQRKEEYDKARARIFSS
Sbjct: 121 QIPAKQLADDKPGHVKIAVRPKPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFSS 180

Query: 181 QGSNGSVDVLSHAFTEGLDISPNRDRAEECRVNDVEKYTSIKDAGNVASSRVAIFRDREK 240
           Q S+GSVDVLSH  TEGL I PNRDRAE+CRVNDVEKY S  DAGN ASSRVAI RDREK
Sbjct: 181 Q-SSGSVDVLSHTVTEGLGIPPNRDRAEDCRVNDVEKYMSGTDAGNGASSRVAILRDREK 240

Query: 241 DLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLGYMSPSPI 300
           DLSDPDYDRSYERYVKSLPINLTPS+NF PFT QNI PSFTGYHVPRNEV LGY+SPS I
Sbjct: 241 DLSDPDYDRSYERYVKSLPINLTPSLNFPPFTFQNIMPSFTGYHVPRNEVPLGYVSPSQI 300

Query: 301 KTVGLNQVSRTSANAPWPCAGMPYTHTAFQ-------------------------RAAFA 360
           KTVGLNQ+SR+SAN PWPCAGMPY H+AFQ                         + AFA
Sbjct: 301 KTVGLNQMSRSSANVPWPCAGMPYPHSAFQVNHFCLCMNVVFVDCAGACSMKMLCKTAFA 360

Query: 361 TFIQRSLSFPPWNMALKQLNDVLLCFFPPK 366
           TFIQRS   P WN+ +KQL+DVL   F PK
Sbjct: 361 TFIQRSP--PSWNLTVKQLDDVLPLLFYPK 380

BLAST of Lsi01G017660 vs. NCBI nr
Match: XP_038883354.1 (R3H domain-containing protein 1-like [Benincasa hispida])

HSP 1 Score: 573.9 bits (1478), Expect = 1.2e-159
Identity = 298/344 (86.63%), Postives = 308/344 (89.53%), Query Frame = 0

Query: 1   MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQN 60
           MDSSSASSID FPD LKDKVS VDPFL+EALHNPRHRLT       +LRMELDIQRFLQN
Sbjct: 1   MDSSSASSIDGFPDFLKDKVSTVDPFLIEALHNPRHRLT-------ILRMELDIQRFLQN 60

Query: 61  QEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVRKTVEARFPTVCLS 120
           QEQQV EFQHFPTSYLRLAAHRVAQHYGLQT VQDNGIDGQGRILVRKTVEARFPTVCLS
Sbjct: 61  QEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTTVQDNGIDGQGRILVRKTVEARFPTVCLS 120

Query: 121 QIPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAKQSLGRSVEQRKEEYDKARARIFSS 180
           QIPAKQSADDKPG VKIAIRPRP+KSSDDAGNCMAKQSLGRSVEQRKEEYDKARARIFSS
Sbjct: 121 QIPAKQSADDKPGRVKIAIRPRPNKSSDDAGNCMAKQSLGRSVEQRKEEYDKARARIFSS 180

Query: 181 QGSNGSVDVLSHAFTEGLDISPNRDRAEECRVNDVEKYTSIKDAGNVASSRVAIFRDREK 240
           QGS GSVDVLS    E LDISPNRDR EECRVN+VEK TS+KD GN ASSRVAI RDREK
Sbjct: 181 QGSTGSVDVLS----EELDISPNRDRVEECRVNNVEKCTSVKDTGNGASSRVAILRDREK 240

Query: 241 DLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLGYMSPSPI 300
           DLSDPDYDRSYERYVKSLPINLTPSMNFAPFT+QN+PPSF+GYHVPRNE SL Y+SPS I
Sbjct: 241 DLSDPDYDRSYERYVKSLPINLTPSMNFAPFTMQNVPPSFSGYHVPRNEFSLSYVSPSVI 300

Query: 301 KTVGLNQVSRTSANAPWPCAGMPYTHTAFQRAAFATFIQRSLSF 345
           KTVGLNQVSR SANAPWPCAGMPYTHTAFQ    A    +SLSF
Sbjct: 301 KTVGLNQVSRYSANAPWPCAGMPYTHTAFQ----APLYNQSLSF 329

BLAST of Lsi01G017660 vs. NCBI nr
Match: XP_011653850.1 (uncharacterized protein LOC101216736 [Cucumis sativus])

HSP 1 Score: 568.9 bits (1465), Expect = 4.0e-158
Identity = 290/344 (84.30%), Postives = 305/344 (88.66%), Query Frame = 0

Query: 1   MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQN 60
           MDSSS SSIDA PD LKDKVS VDPFL+EALHNPRHRLT       +LRMELDIQRFLQN
Sbjct: 1   MDSSSPSSIDALPDGLKDKVSTVDPFLIEALHNPRHRLT-------ILRMELDIQRFLQN 60

Query: 61  QEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVRKTVEARFPTVCLS 120
           Q+QQ+ EFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILV+KTVEARFPT+CLS
Sbjct: 61  QDQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVKKTVEARFPTICLS 120

Query: 121 QIPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAKQSLGRSVEQRKEEYDKARARIFSS 180
           QIPAKQ ADDKPGHVKIAIRPRP+K SD+AGNCMAKQS  R+VEQRKEEYDKARARIFSS
Sbjct: 121 QIPAKQLADDKPGHVKIAIRPRPNKLSDEAGNCMAKQSHARTVEQRKEEYDKARARIFSS 180

Query: 181 QGSNGSVDVLSHAFTEGLDISPNRDRAEECRVNDVEKYTSIKDAGNVASSRVAIFRDREK 240
           QGS G V+VL H   EGL I PNRDR E+CRVNDVEKYTS+ DAGN ASSRVAI RDREK
Sbjct: 181 QGSIGPVEVLPHTVIEGLGIPPNRDRVEDCRVNDVEKYTSVTDAGNGASSRVAILRDREK 240

Query: 241 DLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLGYMSPSPI 300
           DLSDPDYDRSYERYVKSLPINLTPS+NFAPFTVQNI PSFTGYHVPRNEVSLGY+SPSPI
Sbjct: 241 DLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNITPSFTGYHVPRNEVSLGYVSPSPI 300

Query: 301 KTVGLNQVSRTSANAPWPCAGMPYTHTAFQRAAFATFIQRSLSF 345
           KTVGLNQVSR SAN PWPCAGMPY HTAFQ    A   Q+SLSF
Sbjct: 301 KTVGLNQVSRPSANVPWPCAGMPYPHTAFQ----APLYQQSLSF 333

BLAST of Lsi01G017660 vs. NCBI nr
Match: KGN54887.2 (hypothetical protein Csa_012257 [Cucumis sativus])

HSP 1 Score: 564.7 bits (1454), Expect = 7.5e-157
Identity = 284/330 (86.06%), Postives = 298/330 (90.30%), Query Frame = 0

Query: 1   MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQN 60
           MDSSS SSIDA PD LKDKVS VDPFL+EALHNPRHRLT       +LRMELDIQRFLQN
Sbjct: 1   MDSSSPSSIDALPDGLKDKVSTVDPFLIEALHNPRHRLT-------ILRMELDIQRFLQN 60

Query: 61  QEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVRKTVEARFPTVCLS 120
           Q+QQ+ EFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILV+KTVEARFPT+CLS
Sbjct: 61  QDQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVKKTVEARFPTICLS 120

Query: 121 QIPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAKQSLGRSVEQRKEEYDKARARIFSS 180
           QIPAKQ ADDKPGHVKIAIRPRP+K SD+AGNCMAKQS  R+VEQRKEEYDKARARIFSS
Sbjct: 121 QIPAKQLADDKPGHVKIAIRPRPNKLSDEAGNCMAKQSHARTVEQRKEEYDKARARIFSS 180

Query: 181 QGSNGSVDVLSHAFTEGLDISPNRDRAEECRVNDVEKYTSIKDAGNVASSRVAIFRDREK 240
           QGS G V+VL H   EGL I PNRDR E+CRVNDVEKYTS+ DAGN ASSRVAI RDREK
Sbjct: 181 QGSIGPVEVLPHTVIEGLGIPPNRDRVEDCRVNDVEKYTSVTDAGNGASSRVAILRDREK 240

Query: 241 DLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLGYMSPSPI 300
           DLSDPDYDRSYERYVKSLPINLTPS+NFAPFTVQNI PSFTGYHVPRNEVSLGY+SPSPI
Sbjct: 241 DLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNITPSFTGYHVPRNEVSLGYVSPSPI 300

Query: 301 KTVGLNQVSRTSANAPWPCAGMPYTHTAFQ 331
           KTVGLNQVSR SAN PWPCAGMPY HTAFQ
Sbjct: 301 KTVGLNQVSRPSANVPWPCAGMPYPHTAFQ 323

BLAST of Lsi01G017660 vs. NCBI nr
Match: XP_008455743.1 (PREDICTED: R3H domain-containing protein 1-like isoform X1 [Cucumis melo] >KAA0025856.1 R3H domain-containing protein 1-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 562.8 bits (1449), Expect = 2.9e-156
Identity = 289/344 (84.01%), Postives = 306/344 (88.95%), Query Frame = 0

Query: 1   MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQN 60
           MDSSSAS IDAFPD LKDKVS+VDPFL+E LHNPRHRLT       +LRMELDIQRFLQN
Sbjct: 1   MDSSSASPIDAFPDGLKDKVSVVDPFLIEVLHNPRHRLT-------ILRMELDIQRFLQN 60

Query: 61  QEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVRKTVEARFPTVCLS 120
           QEQQV EFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILV+KTVEARFPT+CLS
Sbjct: 61  QEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVKKTVEARFPTICLS 120

Query: 121 QIPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAKQSLGRSVEQRKEEYDKARARIFSS 180
           QIPAKQ ADDKPGHVKIA+RP+P+K SDDAGNCMAKQS GR+VEQRKEEYDKARARIFSS
Sbjct: 121 QIPAKQLADDKPGHVKIAVRPKPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFSS 180

Query: 181 QGSNGSVDVLSHAFTEGLDISPNRDRAEECRVNDVEKYTSIKDAGNVASSRVAIFRDREK 240
           Q S+GSVDVLSH  TEGL I PNRDRAE+CRVNDVEKY S  DAGN ASSRVAI RDREK
Sbjct: 181 Q-SSGSVDVLSHTVTEGLGIPPNRDRAEDCRVNDVEKYMSGTDAGNGASSRVAILRDREK 240

Query: 241 DLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLGYMSPSPI 300
           DLSDPDYDRSYERYVKSLPINLTPS+NF PFT QNI PSFTGYHVPRNEV LGY+SPS I
Sbjct: 241 DLSDPDYDRSYERYVKSLPINLTPSLNFPPFTFQNIMPSFTGYHVPRNEVPLGYVSPSQI 300

Query: 301 KTVGLNQVSRTSANAPWPCAGMPYTHTAFQRAAFATFIQRSLSF 345
           KTVGLNQ+SR+SAN PWPCAGMPY H+AFQ    A   Q+SLSF
Sbjct: 301 KTVGLNQMSRSSANVPWPCAGMPYPHSAFQ----APLYQQSLSF 332

BLAST of Lsi01G017660 vs. TAIR 10
Match: AT3G56680.1 (Single-stranded nucleic acid binding R3H protein )

HSP 1 Score: 253.8 bits (647), Expect = 2.7e-67
Identity = 165/336 (49.11%), Postives = 207/336 (61.61%), Query Frame = 0

Query: 23  VDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHR 82
           VDPFLVEALHN RHRLT       +LRMELD+QR LQN EQQ  EFQHFPTSYLRLAAHR
Sbjct: 24  VDPFLVEALHNSRHRLT-------ILRMELDVQRLLQNPEQQQFEFQHFPTSYLRLAAHR 83

Query: 83  VAQHYGLQTMVQDNGIDG-QGRILVRKTVEARFPTVCLSQIP-AKQSADDKPGHVKIAIR 142
           VA HYGL T VQ++G DG + RILV KT E++FP V LS+IP AKQS + K    K++I+
Sbjct: 84  VANHYGLATAVQESGADGNENRILVTKTTESKFPAVRLSEIPVAKQSENGKFESRKVSIK 143

Query: 143 PRPSKSSD-DAGNCMAKQSLGRSVEQRKEEYDKARARIFSSQGSNGSVDVLSHAFTEGLD 202
            RPSK S   AG+    +   RSVE+RKEEYDKAR RIFS        D  S       +
Sbjct: 144 TRPSKGSGYGAGDLEKNRGPLRSVEERKEEYDKARERIFSGLTGLSCDDSSSETQVYERN 203

Query: 203 ISPNRD--RAEECRVNDVEKYTSIKDAGNVASSRVAIFRDREKDLSDPDYDRSYERYVKS 262
            S +RD  +  +    +V+K  SI+++G   +SRVAIFRDREKD  DPDYDR ++RY++S
Sbjct: 204 ASLSRDDKQVSKNAYVEVKKNLSIRESG--PTSRVAIFRDREKDRFDPDYDRRHQRYIRS 263

Query: 263 LPINLTPSMNFAPFTVQNIPP-----SFTGYH-VPRNEVSLGYMSPSPIKTVGLNQVSRT 322
           LP+N   + N  PF +Q IP       FTGY+ +P     LG+  P P   +     +  
Sbjct: 264 LPVN--QNFNLPPFNIQQIPTPYYEMGFTGYNQIPSPPAPLGF-GPHPSSIMSPYGTTMD 323

Query: 323 SANAPWPCAGMPYTH--TAFQRAAF-ATFIQRSLSF 345
           +    WP A M Y H    F+  +  A F+Q+ LSF
Sbjct: 324 AMYMHWPNAAMMYAHPYEQFRNGSLQAQFVQQPLSF 347

BLAST of Lsi01G017660 vs. TAIR 10
Match: AT3G10770.2 (Single-stranded nucleic acid binding R3H protein )

HSP 1 Score: 236.9 bits (603), Expect = 3.4e-62
Identity = 157/314 (50.00%), Postives = 196/314 (62.42%), Query Frame = 0

Query: 16  LKDKVSMVDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQNQEQQVLEFQHFPTSY 75
           + +K +MVDPFLVEAL NPRHRLT       +LRMELDIQ+F QN EQ   EF  FPTSY
Sbjct: 4   MTEKEAMVDPFLVEALQNPRHRLT-------ILRMELDIQKFFQNPEQLQFEFPPFPTSY 63

Query: 76  LRLAAHRVAQHYGLQTMVQDNGI---DG-QGRILVRKTVEARFPTVCLSQIPAKQSADDK 135
           LRLAAHRVAQHYGL TM  DNG    DG   RILV KT E+RFP VCLS+IP KQ  + +
Sbjct: 64  LRLAAHRVAQHYGLVTMALDNGTGAGDGSDNRILVTKTAESRFPYVCLSEIPVKQPENGR 123

Query: 136 PGHVKIAIRPRPSKSSDDAGN-CMAKQSLGRSVEQRKEEYDKARARIFSSQGSNGSVD-- 195
           P   KIAI+PRP + S   G+    +Q+L RSVE+RKEEYDKARARIF+S  S+ S D  
Sbjct: 124 PEGFKIAIKPRPKRGSGCGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSS 183

Query: 196 VLSHAFTEGLDISPNRDRAEECRVNDVEKYTSIKDAGNVASSRVAIFRDREKDLSDPDYD 255
            L     E  +   NR+   E  VN+       +D+G   +SRVAI RDREKD  DPDYD
Sbjct: 184 SLRPPSLEVRNTCINRNET-EVAVNNSPVDAVTRDSGR--TSRVAIIRDREKDRYDPDYD 243

Query: 256 RSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGY--HVPR-NEVSLGYMSP-SPIKTVG 315
           RSY+RYV+ +P       +F+P  +    P   G+  H+PR ++ +L Y  P +P  +  
Sbjct: 244 RSYDRYVRVMP----SGQSFSPMPIH--IPFHDGFFPHMPRGHQANLNYGHPLNPALSPF 298

Query: 316 LNQVSRTSANAPWP 319
            + V   ++  PWP
Sbjct: 304 THNV---ASYTPWP 298

BLAST of Lsi01G017660 vs. TAIR 10
Match: AT2G40960.1 (Single-stranded nucleic acid binding R3H protein )

HSP 1 Score: 236.5 bits (602), Expect = 4.4e-62
Identity = 157/342 (45.91%), Postives = 208/342 (60.82%), Query Frame = 0

Query: 16  LKDKVSMVDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQNQEQQVLEFQHFPTSY 75
           + DK   VDPFLVEAL NPRHRLT       +LRMELD+QRFLQ+ +QQ  EFQHFPTSY
Sbjct: 14  IADKGFNVDPFLVEALQNPRHRLT-------ILRMELDVQRFLQSPDQQQFEFQHFPTSY 73

Query: 76  LRLAAHRVAQHYGLQTMVQDNGIDG-QGRILVRKTVEARFPTVCLSQIPAKQSADDKPGH 135
           LR AAHRVA HYGL T V+D G DG + RI+V K+ ++RFP   LS+IP KQS   K  H
Sbjct: 74  LRFAAHRVANHYGLITSVRDGGADGNESRIVVTKSSDSRFPAARLSEIPVKQSETGKFEH 133

Query: 136 VKIAIRPRPSKSSDDAGNCMAKQSLGRSVEQRKEEYDKARARIFSSQGSNGSVDVLSHAF 195
           +K+ I+PRP+K S   G+ + K  L +SVE+RKE+YD+ARARIF+   +    D  S   
Sbjct: 134 MKVVIKPRPTKGSGMEGDEL-KGGLLKSVEERKEDYDRARARIFNGLVNIDCNDSSSETN 193

Query: 196 TEGLDISPNRDRAEECRVNDVEKYTSIKDAGNVASSRVAIFRDREKDLSDPDYDRSYERY 255
              ++ S +RD  +  +  ++E   +     +  +SR+AI RDREKD  DPDYDRS  RY
Sbjct: 194 PWRVNCSSSRDENQVLKNGNIEADKNNISRKSNPASRIAILRDREKDRYDPDYDRSNYRY 253

Query: 256 VKSLPINLTPSMNFAPFTVQNI-----PPSFTGYH-VPRNEVSLGYMS-PSPIKTVGLNQ 315
           + +LP++   ++  A F +Q +        F GY       ++LG  S  SP  T GLNQ
Sbjct: 254 ISNLPVD--QNLCVAHFNIQTMGTPIYDMGFRGYSPTAPPSLNLGQHSVMSPCVTTGLNQ 313

Query: 316 VSRTSA-NAPWP-CAGMPYTHT--AFQRAAF-ATFIQRSLSF 345
            SR +A    WP  A + YTH+   F+ + F A F  + LSF
Sbjct: 314 PSRDAAMYMQWPNAAAVMYTHSYDHFRNSPFQAQFYPQPLSF 345

BLAST of Lsi01G017660 vs. TAIR 10
Match: AT3G10770.1 (Single-stranded nucleic acid binding R3H protein )

HSP 1 Score: 232.6 bits (592), Expect = 6.3e-61
Identity = 158/318 (49.69%), Postives = 197/318 (61.95%), Query Frame = 0

Query: 16  LKDKVSMVDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQNQEQQVLEFQHFPTSY 75
           + +K +MVDPFLVEAL NPRHRLT       +LRMELDIQ+F QN EQ   EF  FPTSY
Sbjct: 4   MTEKEAMVDPFLVEALQNPRHRLT-------ILRMELDIQKFFQNPEQLQFEFPPFPTSY 63

Query: 76  LRLAAHRVAQHYGLQTMVQDNGI---DG-QGRILVRKTVEARFPTVCLSQIPAKQSADDK 135
           LRLAAHRVAQHYGL TM  DNG    DG   RILV KT E+RFP VCLS+IP KQ  + +
Sbjct: 64  LRLAAHRVAQHYGLVTMALDNGTGAGDGSDNRILVTKTAESRFPYVCLSEIPVKQPENGR 123

Query: 136 PGHVKIAIRPRPSKSSDDAGN-CMAKQSLGRSVEQRKEEYDKARARIFSSQGSNGSVD-- 195
           P   KIAI+PRP + S   G+    +Q+L RSVE+RKEEYDKARARIF+S  S+ S D  
Sbjct: 124 PEGFKIAIKPRPKRGSGCGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSS 183

Query: 196 VLSHAFTEGLDISPNRDRAEECRVNDVEKYTSIKDAGNVASSRVAIFRDREKDLSDPDYD 255
            L     E  +   NR+   E  VN+       +D+G   +SRVAI RDREKD  DPDYD
Sbjct: 184 SLRPPSLEVRNTCINRNET-EVAVNNSPVDAVTRDSGR--TSRVAIIRDREKDRYDPDYD 243

Query: 256 RSYERYVKSLP---INLTPS-MNFAPFTVQNIPPSFTGY--HVPR-NEVSLGYMSP-SPI 315
           RSY+RYV       + + PS  +F+P  +    P   G+  H+PR ++ +L Y  P +P 
Sbjct: 244 RSYDRYVVDPAYRYVRVMPSGQSFSPMPIH--IPFHDGFFPHMPRGHQANLNYGHPLNPA 303

Query: 316 KTVGLNQVSRTSANAPWP 319
            +   + V   ++  PWP
Sbjct: 304 LSPFTHNV---ASYTPWP 306

BLAST of Lsi01G017660 vs. TAIR 10
Match: AT5G05100.1 (Single-stranded nucleic acid binding R3H protein )

HSP 1 Score: 229.9 bits (585), Expect = 4.1e-60
Identity = 154/329 (46.81%), Postives = 193/329 (58.66%), Query Frame = 0

Query: 16  LKDKVSMVDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQNQEQQVLEFQHFPTSY 75
           + DK +MVDPFLVEAL NPRHRLT       +LRMELDIQ+F Q+ EQQ  EFQ  PTSY
Sbjct: 4   MSDKEAMVDPFLVEALQNPRHRLT-------ILRMELDIQKFFQSPEQQQYEFQPLPTSY 63

Query: 76  LRLAAHRVAQHYGL-QTMVQDNGIDGQG-RILVRKTVEARFPTVCLSQIPAKQ-SADDKP 135
           LRL AHRVAQHYGL  T ++  G+DG G RIL  KTVE+R+P VCLS+IP KQ     +P
Sbjct: 64  LRLIAHRVAQHYGLFTTALEGGGVDGSGNRILATKTVESRYPYVCLSEIPVKQPEIHGRP 123

Query: 136 GHVKIAIRPRPSKSSDDAGN-CMAKQSLGRSVEQRKEEYDKARARIFSSQGSNGSVDVLS 195
              KIAI+PRP++ +  +G+    +++L RSVE+RKEEYDKARARIF+S  S+ S D  +
Sbjct: 124 EGFKIAIKPRPNRGAGGSGSGSGVEKNLLRSVEERKEEYDKARARIFNSPSSSDSEDSST 183

Query: 196 HA--------FTEGLDISPNRDRAE-----ECRVNDVEKYTSIKDAGNVASSRVAIFRDR 255
            A         ++     P+R+  E          DVE+   I+D+G   +SRVAI RDR
Sbjct: 184 RAPPPPYPRLDSKHNTACPSRNETEVVVNYNSNPVDVERNGVIRDSGR--TSRVAIIRDR 243

Query: 256 EKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLGYMSPS 315
           EKD  DPDYDR+  RYV+  P    P  NF P  +           +PR + SL Y  P 
Sbjct: 244 EKDRYDPDYDRN--RYVRVAP----PVQNFNPIPIPLPFHDAIFPQMPRTQASLNYGHP- 303

Query: 316 PIKTVGLNQVSRTSANAPWPCAGMPYTHT 328
                 LN      +   WP A M Y  T
Sbjct: 304 ------LNPAMTAPSYTEWPSATMTYAQT 310

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q150321.6e-0828.76R3H domain-containing protein 1 OS=Homo sapiens OX=9606 GN=R3HDM1 PE=1 SV=3[more]
Match NameE-valueIdentityDescription
A0A5D3DFX82.9e-16277.95R3H domain-containing protein 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1... [more]
A0A0A0L2471.9e-15884.30Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G420720 PE=4 SV=1[more]
A0A5A7SJ761.4e-15684.01R3H domain-containing protein 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1... [more]
A0A1S3C2A61.4e-15684.01R3H domain-containing protein 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A6J1DP275.5e-14580.66R3H domain-containing protein 1-like isoform X1 OS=Momordica charantia OX=3673 G... [more]
Match NameE-valueIdentityDescription
TYK22607.16.0e-16277.95R3H domain-containing protein 1-like isoform X1 [Cucumis melo var. makuwa][more]
XP_038883354.11.2e-15986.63R3H domain-containing protein 1-like [Benincasa hispida][more]
XP_011653850.14.0e-15884.30uncharacterized protein LOC101216736 [Cucumis sativus][more]
KGN54887.27.5e-15786.06hypothetical protein Csa_012257 [Cucumis sativus][more]
XP_008455743.12.9e-15684.01PREDICTED: R3H domain-containing protein 1-like isoform X1 [Cucumis melo] >KAA00... [more]
Match NameE-valueIdentityDescription
AT3G56680.12.7e-6749.11Single-stranded nucleic acid binding R3H protein [more]
AT3G10770.23.4e-6250.00Single-stranded nucleic acid binding R3H protein [more]
AT2G40960.14.4e-6245.91Single-stranded nucleic acid binding R3H protein [more]
AT3G10770.16.3e-6149.69Single-stranded nucleic acid binding R3H protein [more]
AT5G05100.14.1e-6046.81Single-stranded nucleic acid binding R3H protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001374R3H domainSMARTSM00393R3H_4coord: 21..109
e-value: 1.8E-7
score: 40.8
IPR001374R3H domainPFAMPF01424R3Hcoord: 46..97
e-value: 2.6E-14
score: 52.9
IPR001374R3H domainPROSITEPS51061R3Hcoord: 44..108
score: 9.854853
IPR024771SUZ domainPFAMPF12752SUZcoord: 136..180
e-value: 4.0E-9
score: 37.1
IPR024771SUZ domainPROSITEPS51673SUZcoord: 113..182
score: 11.479345
IPR036867R3H domain superfamilyGENE3D3.30.1370.50coord: 14..141
e-value: 9.2E-26
score: 91.9
IPR036867R3H domain superfamilySUPERFAMILY82708R3H domaincoord: 14..130
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 138..166
NoneNo IPR availablePANTHERPTHR15672:SF15OS05G0411600 PROTEINcoord: 7..344
NoneNo IPR availablePANTHERPTHR15672CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEINcoord: 7..344
NoneNo IPR availableCDDcd02642R3H_encore_likecoord: 46..109
e-value: 3.58661E-17
score: 73.4057

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G017660.1Lsi01G017660.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding