Lsi01G015500 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G015500
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	trihelix transcription factor GT-3b-like
Location	chr01: 13674463 .. 13676891 (+)
RNA-Seq Expression	Lsi01G015500
Synteny	Lsi01G015500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGATTATTGCGATCTCCGCCAAGCTGTTTTTTACCGGCGGCCGAATCGAATCGGCGTTAGTGCGGAGTCGGCGGTGGCGGGGGATAGGTTTCCGCCGTGGAGTGTACCGGAGACGAAGGAATTGCTTGCGATCAGAGCGGCGTTGGATAGAAGCTTCTCGGAGATGAAACAGAATAGGATGCTTTGGATTTCGGTGGCCGATAAGATGAAGGCGAAAGGCTTCAATCGGAACGATGAGCAGTGTAAGTGTAAATGGAAAAATCTCGTCACTCGTTATAAGGTAATGGATTNTACTAAATTGAAGGTCAGAGATGTATTAAATACAAAATAATTTTTTTTAAAACATATTAAATATTTTTAAAATTTCACAACTAAATAAACACAAACTTAAAGAAATTGATCTCTTCAAAATTAAAAGTTGAATTATGGGTCAAATCCGAGGGTTAAGGCATCAAAGTCAGAGTTAAGGCATCAAATCTAACAATTTTTCTTTACCATCTTAAATGTATCATCATCCAGAAATTGAAAAACTGTAAAAATAGAATGTTTGAATTCTTACCGAATAACCATTTAGTTTTATTATTTTTAAAAATTGTGTGTATTTTCTCATCATTTTAATAGAACGTTCTTCATAATATTTGAATTCTTTAATTAAATTTCAAAAATAAAAATAATTAATTTTTAAAACTTAACTTGAATTTTAAAAATATTATTAAAAATTATATAACGAAAAGAAAAAAAAATTATAAGTATAAATAATGTTTATAAACTTTATTTTTAAAATTACTTGGAGTTTGTTGTTTTATTATTAGAATCTGGTTTAAAATTTTAAATTTTTTTGTTAATAATAATAAATTACTTTGGTTCTGAAGTAAGATGTTAAGAACGTGCCAACCTAGTTCTGATATTCATGCATCTCAAAGTATTTTTTTTTTTTTAAAAAAAATAATAATAACAATATTATTATTATTATTATTAACAACTGGTATACTTACTTGATTGTTTGGAAACAGGGAATTAAAAAAAAATAATTGTGACAAAAGGAGTTTGCAGCCTTGAAGTAATAGAATGTGTGGTGTTATATTTAATTTTGAAAATGAAGTGTACAAGTTACTCGTTAAATAATTTCTGTATAAAAAATCACAAAACTAATAAACTTTATAATATAAGTTGATAATTTGCTACATCAATAATTTGAAATTTCATATTAACGTATCTGAAAAAAAAAAAAGAAGATATTCCATATTAACAACATATTCCTATATAATAATTGAATTTAATTTATTCTAAACTATCAAGTTATTTTTCGAGTTCTTATAACTATAACAAATATATAGTTTTTCTAAAATGAACGAAAAAAATTCTATAAATATTTTAATAATTACAAAGAAATTAACTTATAAATAATATTAAAAAAAAGAAATTTAAGTTAAATAATACACGAAAAATTAAAAGATAAGAGGTTATTTACCCAACATAATCACAAGTATTGAGTTATTTTTAAATGTAGAAAAATGAGCCAAAATATTTATAAATACATAAAAATTTCACTATCTATTAGACTTACAGTCTATTGCTGTCGCTTACAGTCTATTGCTGATAGATAGTAAAATTTATATGTATTTGTAAATAATGTGATATTTTTCTATTTATAATAATTTCTCTATATTATTTTCATTATTTGTCTTAAAAAATATATAAAGATAAAAAAAACTGTTATCTGATACGAGCATAAAAGGTTAAAGGTTCAAATCTAAAAAAAAAAAAAAAAACCATCTCACTTAGAATAATACACAAGGATAAAATAAGGGAATATGTGTCATTATCAAACAGTTCTCTATATTTTCTTCCTTCTCTTTACTATCTCTCAACCCCTTACAATTCCAGGGTTGTGAAACCATGGATCCCAAAGCTCTAAAGCAGCAATTTCCATTTTACGACGACCTTCATACCATTTTTACTGCAAGGATGCAAAAGAATTGGTGGATCGAAGCCGAAGACCGTTCGGGAGGCTCCAAAAGGAAAGCCACCGAGCTATTCTCCAGCGAGGATCCGAACGGTAATAAAATCGACGAAGACGAAGATGAAGACAAAGTATTCGGGTCAACGAAAACGAAAAAGGGTACGAAAAAGGGGAAATGGAGAAGGGAAGAACATGAGAGGAACTTGAAGGAAATATTGAAGGGTTTTGTGAAAAGAGAGATGGAAATGGAGAGGCAATGGAGAGAAGCATTTAGGGTTAGAGAGGAAGAGAGAAGGTTAAAAGAGGAAGAATGGAGGATGAAAATGGAAGCCATTGAGAGAGAGAGGATGATGATGGAGATATTATGGAGAGAAAATGAAGAGAAGAGAAGAGAGAGAGAAGAAGCAAGGGCTGAGAAGAGAGATGCTTTGATCTCAGCTTTGTTGAGAAGCTTCACATAA

mRNA sequence

ATGGAAGATTATTGCGATCTCCGCCAAGCTGTTTTTTACCGGCGGCCGAATCGAATCGGCGTTAGTGCGGAGTCGGCGGTGGCGGGGGATAGGTTTCCGCCGTGGAGTGTACCGGAGACGAAGGAATTGCTTGCGATCAGAGCGGCGTTGGATAGAAGCTTCTCGGAGATGAAACAGAATAGGATGCTTTGGATTTCGGTGGCCGATAAGATGAAGGCGAAAGGCTTCAATCGGAACGATGAGCAGTGTAAGTGTAAATGGAAAAATCTCGTCACTCGTTATAAGGTAATGGATTNTACTAAATTGAAGGTCAGAGATGGTTGTGAAACCATGGATCCCAAAGCTCTAAAGCAGCAATTTCCATTTTACGACGACCTTCATACCATTTTTACTGCAAGGATGCAAAAGAATTGGTGGATCGAAGCCGAAGACCGTTCGGGAGGCTCCAAAAGGAAAGCCACCGAGCTATTCTCCAGCGAGGATCCGAACGGTAATAAAATCGACGAAGACGAAGATGAAGACAAAGTATTCGGGTCAACGAAAACGAAAAAGGGTACGAAAAAGGGGAAATGGAGAAGGGAAGAACATGAGAGGAACTTGAAGGAAATATTGAAGGGTTTTGTGAAAAGAGAGATGGAAATGGAGAGGCAATGGAGAGAAGCATTTAGGGTTAGAGAGGAAGAGAGAAGGTTAAAAGAGGAAGAATGGAGGATGAAAATGGAAGCCATTGAGAGAGAGAGGATGATGATGGAGATATTATGGAGAGAAAATGAAGAGAAGAGAAGAGAGAGAGAAGAAGCAAGGGCTGAGAAGAGAGATGCTTTGATCTCAGCTTTGTTGAGAAGCTTCACATAA

Coding sequence (CDS)

ATGGAAGATTATTGCGATCTCCGCCAAGCTGTTTTTTACCGGCGGCCGAATCGAATCGGCGTTAGTGCGGAGTCGGCGGTGGCGGGGGATAGGTTTCCGCCGTGGAGTGTACCGGAGACGAAGGAATTGCTTGCGATCAGAGCGGCGTTGGATAGAAGCTTCTCGGAGATGAAACAGAATAGGATGCTTTGGATTTCGGTGGCCGATAAGATGAAGGCGAAAGGCTTCAATCGGAACGATGAGCAGTGTAAGTGTAAATGGAAAAATCTCGTCACTCGTTATAAGGTAATGGATTNTACTAAATTGAAGGTCAGAGATGGTTGTGAAACCATGGATCCCAAAGCTCTAAAGCAGCAATTTCCATTTTACGACGACCTTCATACCATTTTTACTGCAAGGATGCAAAAGAATTGGTGGATCGAAGCCGAAGACCGTTCGGGAGGCTCCAAAAGGAAAGCCACCGAGCTATTCTCCAGCGAGGATCCGAACGGTAATAAAATCGACGAAGACGAAGATGAAGACAAAGTATTCGGGTCAACGAAAACGAAAAAGGGTACGAAAAAGGGGAAATGGAGAAGGGAAGAACATGAGAGGAACTTGAAGGAAATATTGAAGGGTTTTGTGAAAAGAGAGATGGAAATGGAGAGGCAATGGAGAGAAGCATTTAGGGTTAGAGAGGAAGAGAGAAGGTTAAAAGAGGAAGAATGGAGGATGAAAATGGAAGCCATTGAGAGAGAGAGGATGATGATGGAGATATTATGGAGAGAAAATGAAGAGAAGAGAAGAGAGAGAGAAGAAGCAAGGGCTGAGAAGAGAGATGCTTTGATCTCAGCTTTGTTGAGAAGCTTCACATAA

Protein sequence

MEDYCDLRQAVFYRRPNRIGVSAESAVAGDRFPPWSVPETKELLAIRAALDRSFSEMKQNRMLWISVADKMKAKGFNRNDEQCKCKWKNLVTRYKVMDXTKLKVRDGCETMDPKALKQQFPFYDDLHTIFTARMQKNWWIEAEDRSGGSKRKATELFSSEDPNGNKIDEDEDEDKVFGSTKTKKGTKKGKWRREEHERNLKEILKGFVKREMEMERQWREAFRVREEERRLKEEEWRMKMEAIERERMMMEILWRENEEKRREREEARAEKRDALISALLRSFT

Homology

[Close]

BLAST of Lsi01G015500 vs. ExPASy Swiss-Prot
Match: O80450 (Trihelix transcription factor GT-3b OS=Arabidopsis thaliana OX=3702 GN=GT-3B PE=1 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 4.2e-57
Identity = 122/266 (45.86%), Postives = 168/266 (63.16%), Query Frame = 0


Query: 23  AESAVAGDRFPPWSVPETKELLAIRAALDRSFSEMKQNRMLWISVADKMKAKGFNRNDEQ 82
           A     GDRFP WSV ETKEL+ IR  LD++F E K+N++LW  +++KM+ K F R+ EQ
Sbjct: 30  ASPVAVGDRFPQWSVEETKELIGIRGELDQTFMETKRNKLLWEVISNKMRDKSFPRSPEQ 89

Query: 83  CKCKWKNLVTRYKVMDXTKLKVRDGCETMDPKALKQQFPFYDDLHTIFTARMQKNWWIEA 142
           CKCKWKNLVTR+K           GCETM+ +  +QQFPFYDD+  IFT RMQ+  W E+
Sbjct: 90  CKCKWKNLVTRFK-----------GCETMEAETARQQFPFYDDMQNIFTTRMQRMLWAES 149

Query: 143 EDRSGGSKRKATELFSSEDPNGNKIDED----EDEDKVFGSTKTKKGTKKGKWRREEHER 202
           E   GG+   A +   S D     ++E+     ++ K+    K     +KG         
Sbjct: 150 EGGGGGTSGAARKREYSSDEEEENVNEELVDVSNDPKILNPKKNIAKKRKGGSNSSNSNN 209

Query: 203 NLKEILKGFVKREMEMERQWREAFRVREEERRLKEEEWRMKMEAIERERMMMEILWRENE 262
            ++E+L+ F++ ++ ME +WRE +  RE+ER  KEEEWR KME +E+ER+ ME +WR+ E
Sbjct: 210 GVREVLEEFMRHQVRMESEWREGWEAREKERAEKEEEWRRKMEELEKERLAMERMWRDRE 269

Query: 263 EKRREREEARAEKRDALISALLRSFT 285
           E+RR REE RAEKRD+LI+ALL   T
Sbjct: 270 EQRRSREEMRAEKRDSLINALLAKLT 284

[Close]

BLAST of Lsi01G015500 vs. ExPASy Swiss-Prot
Match: Q9SDW0 (Trihelix transcription factor GT-3a OS=Arabidopsis thaliana OX=3702 GN=GT-3A PE=1 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 2.5e-49
Identity = 127/274 (46.35%), Postives = 173/274 (63.14%), Query Frame = 0


Query: 29  GDRFPPWSVPETKELLAIRAALDRSFSEMKQNRMLWISVADKMKAKGFNRNDEQCKCKWK 88
           G+R P WS+ ETKELLAIR  LD++F E K+N++LW  VA KM  KGF R+ EQCK KWK
Sbjct: 46  GERIPQWSIEETKELLAIREELDQTFMETKRNKLLWEVVAAKMADKGFVRSAEQCKSKWK 105

Query: 89  NLVTRYKVMDXTKLKVRDGCETMDPKALKQQFPFYDDLHTIFTARMQKNWWIEAEDRSGG 148
           NLVTRYK            CET +P A++QQFPFY+++ +IF ARMQ+  W EA + S  
Sbjct: 106 NLVTRYK-----------ACETTEPDAIRQQFPFYNEIQSIFEARMQRMLWSEATEPSTS 165

Query: 149 SKRKATELFSSED-------PNG-------NKIDEDEDEDKVF---GSTKTKKGTKKGK- 208
           SKRK  + FSS+D       PN        + ++  + E +V     ST  +K  KKGK 
Sbjct: 166 SKRKHHQ-FSSDDEEEEVDEPNQDINEELLSLVETQKRETEVITTSTSTNPRKRAKKGKG 225

Query: 209 ----WRREEHERNLKEILKGFVKREMEMERQWREAFRVREEERRLKEEEWRMKMEAIERE 268
                + E     LK+IL+ F+++ ++ME++WR+A+ ++E ER  +E+EWR +M  +E E
Sbjct: 226 VASGTKAETAGNTLKDILEEFMRQTVKMEKEWRDAWEMKEIEREKREKEWRRRMAELEEE 285

Query: 269 RMMMEILWRENEEKRREREEARAEKRDALISALL 281
           R   E  W E EE+RR REEARA+KRD+LI ALL
Sbjct: 286 RAATERRWMEREEERRLREEARAQKRDSLIDALL 307

[Close]

BLAST of Lsi01G015500 vs. ExPASy Swiss-Prot
Match: Q9LU92 (Trihelix transcription factor GT-4 OS=Arabidopsis thaliana OX=3702 GN=GT-4 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.1e-09
Identity = 31/106 (29.25%), Postives = 55/106 (51.89%), Query Frame = 0


Query: 31  RFPPWSVPETKELLAIRAALDRSFSEMKQNRMLWISVADKMKAKGFNRNDEQCKCKWKNL 90
           R   W+  ET+ L+++R  +D  F+  K N+ LW  ++ KM+ KGF+R+   C  KW+N+
Sbjct: 51  RAETWAQDETRTLISLRREMDNLFNTSKSNKHLWEQISKKMREKGFDRSPSMCTDKWRNI 110

Query: 91  VTRYKVMDXTKLKVRDGCETMDPKALKQQFPFYDDLHTIFTARMQK 137
           +  +K     + K   G  T        +  +Y+++  IF  R +K
Sbjct: 111 LKEFKKAKQHEDKATSGGST--------KMSYYNEIEDIFRERKKK 148

[Close]

BLAST of Lsi01G015500 vs. ExPASy Swiss-Prot
Match: Q9FX53 (Trihelix transcription factor GT-1 OS=Arabidopsis thaliana OX=3702 GN=GT-1 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 4.0e-07
Identity = 24/65 (36.92%), Postives = 37/65 (56.92%), Query Frame = 0


Query: 31  RFPPWSVPETKELLAIRAALDRSFSEMKQNRMLWISVADKMKAKGFNRNDEQCKCKWKNL 90
           R   W   ET+ L+  R  +D  F+  K N+ LW  ++ KM+ KGF+R+   C  KW+NL
Sbjct: 83  RAETWVQDETRSLIMFRRGMDGLFNTSKSNKHLWEQISSKMREKGFDRSPTMCTDKWRNL 142

Query: 91  VTRYK 96
           +  +K
Sbjct: 143 LKEFK 147

[Close]

BLAST of Lsi01G015500 vs. ExPASy TrEMBL
Match: A0A0A0KZY4 (Myb-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G310210 PE=4 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 7.2e-108
Identity = 222/287 (77.35%), Postives = 245/287 (85.37%), Query Frame = 0


Query: 1   MEDYCDLRQAVFYRRPNRIGVSAESAVAGDRFPPWSVPETKELLAIRAALDRSFSEMKQN 60
           MED+CDLR+AVF+    RIGV+AE+  AGDRFPPWSV ETKELLAIRAALD++FSEMKQN
Sbjct: 1   MEDFCDLRRAVFH----RIGVNAEA--AGDRFPPWSVLETKELLAIRAALDKNFSEMKQN 60

Query: 61  RMLWISVADKMKAKGFNRNDEQCKCKWKNLVTRYKVMDXTKLKVRDGCETMDPKALKQQF 120
           RMLWISVA+KMKAKGFNR+DEQCKCKWKNLVTRYK           GCETMDPKALK QF
Sbjct: 61  RMLWISVAEKMKAKGFNRSDEQCKCKWKNLVTRYK-----------GCETMDPKALKHQF 120

Query: 121 PFYDDLHTIFTARMQKNWWIEAEDRSGGSKRKATELFSSEDPNGNKIDEDEDEDKVFGST 180
           PFYDDLHTIFTARMQKNWW+EAE+RSGGSKRK      +EDPNG++  E E+E+K    T
Sbjct: 121 PFYDDLHTIFTARMQKNWWVEAENRSGGSKRK-----PNEDPNGDR--ELENEEK----T 180

Query: 181 KTKKGTKKGKWRR---EEHERNLKEILKGFVKREMEMERQWREAFRVREEERRLKEEEWR 240
           KTK GTKK KW+R   EEHERNLKEILK FVKREMEMER+WREAFRVREEERRLKEEEWR
Sbjct: 181 KTKNGTKKRKWKRDNPEEHERNLKEILKDFVKREMEMEREWREAFRVREEERRLKEEEWR 240

Query: 241 MKMEAIERERMMMEILWRENEEKRREREEARAEKRDALISALLRSFT 285
           MKME IERE+MMMEILWRE+E+KRREREEARA+K DALISALL + T
Sbjct: 241 MKMEGIEREKMMMEILWRESEDKRREREEARAQKTDALISALLTNLT 259

[Close]

BLAST of Lsi01G015500 vs. ExPASy TrEMBL
Match: A0A1S3CKZ2 (trihelix transcription factor GT-3b isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502137 PE=4 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 3.7e-104
Identity = 220/289 (76.12%), Postives = 243/289 (84.08%), Query Frame = 0


Query: 1   MEDYCDLRQAVFYRRPNRI-GVSAESAVAGDRFPPWSVPETKELLAIRAALDRSFSEMKQ 60
           MED+CDLR+AV   R +RI GV+A+ A AGDRFPPWSV ETKELLAIRAALD++FSEMKQ
Sbjct: 1   MEDFCDLRRAV---RLHRIAGVNADQA-AGDRFPPWSVLETKELLAIRAALDKNFSEMKQ 60

Query: 61  NRMLWISVADKMKAKGFNRNDEQCKCKWKNLVTRYKVMDXTKLKVRDGCETMDPKALKQQ 120
           NRMLWISVA KMKAKGFNR+DEQCKCKWKNLVTRYK +         GCETMDPKALK Q
Sbjct: 61  NRMLWISVAGKMKAKGFNRSDEQCKCKWKNLVTRYKSLHI------QGCETMDPKALKHQ 120

Query: 121 FPFYDDLHTIFTARMQKNWWIEAEDRSGGSKRKATELFSSEDPNGNKIDEDEDEDKVFGS 180
           FPFYDDLHTIFTARMQKNWW+EAE+RSG  KRKA     +EDPNG++  E E+E+K    
Sbjct: 121 FPFYDDLHTIFTARMQKNWWVEAENRSGVLKRKA-----NEDPNGDR--ELENEEK---- 180

Query: 181 TKTKKGTKKGKWRR----EEHERNLKEILKGFVKREMEMERQWREAFRVREEERRLKEEE 240
           TKTK  TKK KW+R    EEHERNL+EILKGF+KREMEMER+WREAFRVREEERRLKEEE
Sbjct: 181 TKTKNVTKKRKWKRDNDLEEHERNLEEILKGFLKREMEMEREWREAFRVREEERRLKEEE 240

Query: 241 WRMKMEAIERERMMMEILWRENEEKRREREEARAEKRDALISALLRSFT 285
           WRMKME IERE+M MEILWRENEEKRREREEARA+K DALISALL + T
Sbjct: 241 WRMKMEGIEREKMTMEILWRENEEKRREREEARAQKTDALISALLTNLT 268

[Close]

BLAST of Lsi01G015500 vs. ExPASy TrEMBL
Match: A0A5A7UVF8 (Trihelix transcription factor GT-3b isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold612G00040 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 1.1e-103
Identity = 220/289 (76.12%), Postives = 242/289 (83.74%), Query Frame = 0


Query: 1   MEDYCDLRQAVFYRRPNRI-GVSAESAVAGDRFPPWSVPETKELLAIRAALDRSFSEMKQ 60
           MED+CDLR+AV   R +RI GV+A+ A AGDRFPPWSV ETKELLAIRAALD++FSEMKQ
Sbjct: 1   MEDFCDLRRAV---RLHRIAGVNADQA-AGDRFPPWSVLETKELLAIRAALDKNFSEMKQ 60

Query: 61  NRMLWISVADKMKAKGFNRNDEQCKCKWKNLVTRYKVMDXTKLKVRDGCETMDPKALKQQ 120
           NRMLWISVA KMKAKGFNR+DEQCKCKWKNLVTRYK           GCETMDPKALK Q
Sbjct: 61  NRMLWISVAGKMKAKGFNRSDEQCKCKWKNLVTRYK-----------GCETMDPKALKHQ 120

Query: 121 FPFYDDLHTIFTARMQKNWWIEAEDRSGGSKRKATELFSSEDPNGNKIDEDEDEDKVFGS 180
           FPFYDDLHTIFTARMQKNWW+EAE+RSG  KRKA     +EDPNG++  E E+E+K    
Sbjct: 121 FPFYDDLHTIFTARMQKNWWVEAENRSGVLKRKA-----NEDPNGDR--ELENEEK---- 180

Query: 181 TKTKKGTKKGKWRR----EEHERNLKEILKGFVKREMEMERQWREAFRVREEERRLKEEE 240
           TKTK  TKK KW+R    EEHERNL+EILKGF+KREMEMER+WREAFRVREEERRLKEEE
Sbjct: 181 TKTKNVTKKRKWKRDNDLEEHERNLEEILKGFLKREMEMEREWREAFRVREEERRLKEEE 240

Query: 241 WRMKMEAIERERMMMEILWRENEEKRREREEARAEKRDALISALLRSFT 285
           WRMKME IERE+M MEILWRENEEKRREREEARA+K DALISALL + T
Sbjct: 241 WRMKMEGIEREKMTMEILWRENEEKRREREEARAQKTDALISALLTNLT 263

[Close]

BLAST of Lsi01G015500 vs. ExPASy TrEMBL
Match: A0A1S3CKY0 (trihelix transcription factor GT-3b isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502137 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 1.1e-103
Identity = 220/289 (76.12%), Postives = 242/289 (83.74%), Query Frame = 0


Query: 1   MEDYCDLRQAVFYRRPNRI-GVSAESAVAGDRFPPWSVPETKELLAIRAALDRSFSEMKQ 60
           MED+CDLR+AV   R +RI GV+A+ A AGDRFPPWSV ETKELLAIRAALD++FSEMKQ
Sbjct: 1   MEDFCDLRRAV---RLHRIAGVNADQA-AGDRFPPWSVLETKELLAIRAALDKNFSEMKQ 60

Query: 61  NRMLWISVADKMKAKGFNRNDEQCKCKWKNLVTRYKVMDXTKLKVRDGCETMDPKALKQQ 120
           NRMLWISVA KMKAKGFNR+DEQCKCKWKNLVTRYK           GCETMDPKALK Q
Sbjct: 61  NRMLWISVAGKMKAKGFNRSDEQCKCKWKNLVTRYK-----------GCETMDPKALKHQ 120

Query: 121 FPFYDDLHTIFTARMQKNWWIEAEDRSGGSKRKATELFSSEDPNGNKIDEDEDEDKVFGS 180
           FPFYDDLHTIFTARMQKNWW+EAE+RSG  KRKA     +EDPNG++  E E+E+K    
Sbjct: 121 FPFYDDLHTIFTARMQKNWWVEAENRSGVLKRKA-----NEDPNGDR--ELENEEK---- 180

Query: 181 TKTKKGTKKGKWRR----EEHERNLKEILKGFVKREMEMERQWREAFRVREEERRLKEEE 240
           TKTK  TKK KW+R    EEHERNL+EILKGF+KREMEMER+WREAFRVREEERRLKEEE
Sbjct: 181 TKTKNVTKKRKWKRDNDLEEHERNLEEILKGFLKREMEMEREWREAFRVREEERRLKEEE 240

Query: 241 WRMKMEAIERERMMMEILWRENEEKRREREEARAEKRDALISALLRSFT 285
           WRMKME IERE+M MEILWRENEEKRREREEARA+K DALISALL + T
Sbjct: 241 WRMKMEGIEREKMTMEILWRENEEKRREREEARAQKTDALISALLTNLT 263

[Close]

BLAST of Lsi01G015500 vs. ExPASy TrEMBL
Match: A0A5D3DZE6 (Trihelix transcription factor GT-3b isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1212G00080 PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 2.4e-103
Identity = 219/289 (75.78%), Postives = 242/289 (83.74%), Query Frame = 0


Query: 1   MEDYCDLRQAVFYRRPNRI-GVSAESAVAGDRFPPWSVPETKELLAIRAALDRSFSEMKQ 60
           MED+CDLR+AV   R +RI GV+A+ A AGDRFPPWSV ETKELLAIRAALD++FSEMKQ
Sbjct: 1   MEDFCDLRRAV---RLHRIAGVNADQA-AGDRFPPWSVLETKELLAIRAALDKNFSEMKQ 60

Query: 61  NRMLWISVADKMKAKGFNRNDEQCKCKWKNLVTRYKVMDXTKLKVRDGCETMDPKALKQQ 120
           NRMLWISVA KMKAKGFNR+DEQCKCKWKNLVTRYK           GCETMDPKALK Q
Sbjct: 61  NRMLWISVAGKMKAKGFNRSDEQCKCKWKNLVTRYK-----------GCETMDPKALKHQ 120

Query: 121 FPFYDDLHTIFTARMQKNWWIEAEDRSGGSKRKATELFSSEDPNGNKIDEDEDEDKVFGS 180
           FPFYDDLHTIFTARMQKNWW+EAE+RSG  KRKA     +EDPNG++  E E+E+K    
Sbjct: 121 FPFYDDLHTIFTARMQKNWWVEAENRSGVLKRKA-----NEDPNGDR--ELENEEK---- 180

Query: 181 TKTKKGTKKGKWRR----EEHERNLKEILKGFVKREMEMERQWREAFRVREEERRLKEEE 240
           TKTK  TKK KW+R    E+HERNL+EILKGF+KREMEMER+WREAFRVREEERRLKEEE
Sbjct: 181 TKTKNVTKKRKWKRDNDLEDHERNLEEILKGFLKREMEMEREWREAFRVREEERRLKEEE 240

Query: 241 WRMKMEAIERERMMMEILWRENEEKRREREEARAEKRDALISALLRSFT 285
           WRMKME IERE+M MEILWRENEEKRREREEARA+K DALISALL + T
Sbjct: 241 WRMKMEGIEREKMTMEILWRENEEKRREREEARAQKTDALISALLTNLT 263

[Close]

BLAST of Lsi01G015500 vs. NCBI nr
Match: XP_038883623.1 (trihelix transcription factor GT-3b-like [Benincasa hispida])

HSP 1 Score: 448.0 bits (1151), Expect = 6.2e-122
Identity = 237/284 (83.45%), Postives = 251/284 (88.38%), Query Frame = 0


Query: 1   MEDYCDLRQAVFYRRPNRIGVSAESAVAGDRFPPWSVPETKELLAIRAALDRSFSEMKQN 60
           MEDYCD+R+A+ YRRP+ IGV   +  AGDRFPPWSVPETKELLAIRAALDRSFSEMKQN
Sbjct: 1   MEDYCDVRRAILYRRPDGIGV---NVAAGDRFPPWSVPETKELLAIRAALDRSFSEMKQN 60

Query: 61  RMLWISVADKMKAKGFNRNDEQCKCKWKNLVTRYKVMDXTKLKVRDGCETMDPKALKQQF 120
           RMLWISVADKMKAKGFNRN EQCKCKWKNLVTRYK           GCETMDPKA KQQF
Sbjct: 61  RMLWISVADKMKAKGFNRNHEQCKCKWKNLVTRYK-----------GCETMDPKAQKQQF 120

Query: 121 PFYDDLHTIFTARMQKNWWIEAEDRSGGSKRKATELFSSEDPNGNKIDEDEDEDKVFGST 180
           PFY+DLHTIFTAR+Q NWWIEAEDRSGGSKRKAT  FS+E+   N  DEDEDEDK FGST
Sbjct: 121 PFYNDLHTIFTARIQNNWWIEAEDRSGGSKRKATGRFSNEE---NDEDEDEDEDKTFGST 180

Query: 181 KTKKGTKKGKWRREEHERNLKEILKGFVKREMEMERQWREAFRVREEERRLKEEEWRMKM 240
           KTKKGTKKGKWR+EE ERNLKEILKGFV+REMEMERQWREAFRVREEERRLKEEEWRMKM
Sbjct: 181 KTKKGTKKGKWRKEEDERNLKEILKGFVEREMEMERQWREAFRVREEERRLKEEEWRMKM 240

Query: 241 EAIERERMMMEILWRENEEKRREREEARAEKRDALISALLRSFT 285
           EAIERE+MMMEILWRE EEKRRE+EEARA+K DALISALLRS T
Sbjct: 241 EAIEREKMMMEILWREKEEKRREKEEARAQKIDALISALLRSLT 267

[Close]

BLAST of Lsi01G015500 vs. NCBI nr
Match: XP_011653700.1 (trihelix transcription factor GT-3b [Cucumis sativus] >XP_031739717.1 trihelix transcription factor GT-3b [Cucumis sativus] >XP_031739718.1 trihelix transcription factor GT-3b [Cucumis sativus] >KGN54384.1 hypothetical protein Csa_018084 [Cucumis sativus])

HSP 1 Score: 400.2 bits (1027), Expect = 1.5e-107
Identity = 222/287 (77.35%), Postives = 245/287 (85.37%), Query Frame = 0


Query: 1   MEDYCDLRQAVFYRRPNRIGVSAESAVAGDRFPPWSVPETKELLAIRAALDRSFSEMKQN 60
           MED+CDLR+AVF+    RIGV+AE+  AGDRFPPWSV ETKELLAIRAALD++FSEMKQN
Sbjct: 1   MEDFCDLRRAVFH----RIGVNAEA--AGDRFPPWSVLETKELLAIRAALDKNFSEMKQN 60

Query: 61  RMLWISVADKMKAKGFNRNDEQCKCKWKNLVTRYKVMDXTKLKVRDGCETMDPKALKQQF 120
           RMLWISVA+KMKAKGFNR+DEQCKCKWKNLVTRYK           GCETMDPKALK QF
Sbjct: 61  RMLWISVAEKMKAKGFNRSDEQCKCKWKNLVTRYK-----------GCETMDPKALKHQF 120

Query: 121 PFYDDLHTIFTARMQKNWWIEAEDRSGGSKRKATELFSSEDPNGNKIDEDEDEDKVFGST 180
           PFYDDLHTIFTARMQKNWW+EAE+RSGGSKRK      +EDPNG++  E E+E+K    T
Sbjct: 121 PFYDDLHTIFTARMQKNWWVEAENRSGGSKRK-----PNEDPNGDR--ELENEEK----T 180

Query: 181 KTKKGTKKGKWRR---EEHERNLKEILKGFVKREMEMERQWREAFRVREEERRLKEEEWR 240
           KTK GTKK KW+R   EEHERNLKEILK FVKREMEMER+WREAFRVREEERRLKEEEWR
Sbjct: 181 KTKNGTKKRKWKRDNPEEHERNLKEILKDFVKREMEMEREWREAFRVREEERRLKEEEWR 240

Query: 241 MKMEAIERERMMMEILWRENEEKRREREEARAEKRDALISALLRSFT 285
           MKME IERE+MMMEILWRE+E+KRREREEARA+K DALISALL + T
Sbjct: 241 MKMEGIEREKMMMEILWRESEDKRREREEARAQKTDALISALLTNLT 259

[Close]

BLAST of Lsi01G015500 vs. NCBI nr
Match: XP_008464201.1 (PREDICTED: trihelix transcription factor GT-3b isoform X1 [Cucumis melo] >XP_008464202.1 PREDICTED: trihelix transcription factor GT-3b isoform X1 [Cucumis melo])

HSP 1 Score: 387.9 bits (995), Expect = 7.6e-104
Identity = 220/289 (76.12%), Postives = 243/289 (84.08%), Query Frame = 0


Query: 1   MEDYCDLRQAVFYRRPNRI-GVSAESAVAGDRFPPWSVPETKELLAIRAALDRSFSEMKQ 60
           MED+CDLR+AV   R +RI GV+A+ A AGDRFPPWSV ETKELLAIRAALD++FSEMKQ
Sbjct: 1   MEDFCDLRRAV---RLHRIAGVNADQA-AGDRFPPWSVLETKELLAIRAALDKNFSEMKQ 60

Query: 61  NRMLWISVADKMKAKGFNRNDEQCKCKWKNLVTRYKVMDXTKLKVRDGCETMDPKALKQQ 120
           NRMLWISVA KMKAKGFNR+DEQCKCKWKNLVTRYK +         GCETMDPKALK Q
Sbjct: 61  NRMLWISVAGKMKAKGFNRSDEQCKCKWKNLVTRYKSLHI------QGCETMDPKALKHQ 120

Query: 121 FPFYDDLHTIFTARMQKNWWIEAEDRSGGSKRKATELFSSEDPNGNKIDEDEDEDKVFGS 180
           FPFYDDLHTIFTARMQKNWW+EAE+RSG  KRKA     +EDPNG++  E E+E+K    
Sbjct: 121 FPFYDDLHTIFTARMQKNWWVEAENRSGVLKRKA-----NEDPNGDR--ELENEEK---- 180

Query: 181 TKTKKGTKKGKWRR----EEHERNLKEILKGFVKREMEMERQWREAFRVREEERRLKEEE 240
           TKTK  TKK KW+R    EEHERNL+EILKGF+KREMEMER+WREAFRVREEERRLKEEE
Sbjct: 181 TKTKNVTKKRKWKRDNDLEEHERNLEEILKGFLKREMEMEREWREAFRVREEERRLKEEE 240

Query: 241 WRMKMEAIERERMMMEILWRENEEKRREREEARAEKRDALISALLRSFT 285
           WRMKME IERE+M MEILWRENEEKRREREEARA+K DALISALL + T
Sbjct: 241 WRMKMEGIEREKMTMEILWRENEEKRREREEARAQKTDALISALLTNLT 268

[Close]

BLAST of Lsi01G015500 vs. NCBI nr
Match: XP_008464203.1 (PREDICTED: trihelix transcription factor GT-3b isoform X2 [Cucumis melo] >KAA0059080.1 trihelix transcription factor GT-3b isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 386.3 bits (991), Expect = 2.2e-103
Identity = 220/289 (76.12%), Postives = 242/289 (83.74%), Query Frame = 0


Query: 1   MEDYCDLRQAVFYRRPNRI-GVSAESAVAGDRFPPWSVPETKELLAIRAALDRSFSEMKQ 60
           MED+CDLR+AV   R +RI GV+A+ A AGDRFPPWSV ETKELLAIRAALD++FSEMKQ
Sbjct: 1   MEDFCDLRRAV---RLHRIAGVNADQA-AGDRFPPWSVLETKELLAIRAALDKNFSEMKQ 60

Query: 61  NRMLWISVADKMKAKGFNRNDEQCKCKWKNLVTRYKVMDXTKLKVRDGCETMDPKALKQQ 120
           NRMLWISVA KMKAKGFNR+DEQCKCKWKNLVTRYK           GCETMDPKALK Q
Sbjct: 61  NRMLWISVAGKMKAKGFNRSDEQCKCKWKNLVTRYK-----------GCETMDPKALKHQ 120

Query: 121 FPFYDDLHTIFTARMQKNWWIEAEDRSGGSKRKATELFSSEDPNGNKIDEDEDEDKVFGS 180
           FPFYDDLHTIFTARMQKNWW+EAE+RSG  KRKA     +EDPNG++  E E+E+K    
Sbjct: 121 FPFYDDLHTIFTARMQKNWWVEAENRSGVLKRKA-----NEDPNGDR--ELENEEK---- 180

Query: 181 TKTKKGTKKGKWRR----EEHERNLKEILKGFVKREMEMERQWREAFRVREEERRLKEEE 240
           TKTK  TKK KW+R    EEHERNL+EILKGF+KREMEMER+WREAFRVREEERRLKEEE
Sbjct: 181 TKTKNVTKKRKWKRDNDLEEHERNLEEILKGFLKREMEMEREWREAFRVREEERRLKEEE 240

Query: 241 WRMKMEAIERERMMMEILWRENEEKRREREEARAEKRDALISALLRSFT 285
           WRMKME IERE+M MEILWRENEEKRREREEARA+K DALISALL + T
Sbjct: 241 WRMKMEGIEREKMTMEILWRENEEKRREREEARAQKTDALISALLTNLT 263

[Close]

BLAST of Lsi01G015500 vs. NCBI nr
Match: TYK29247.1 (trihelix transcription factor GT-3b isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 385.2 bits (988), Expect = 4.9e-103
Identity = 219/289 (75.78%), Postives = 242/289 (83.74%), Query Frame = 0


Query: 1   MEDYCDLRQAVFYRRPNRI-GVSAESAVAGDRFPPWSVPETKELLAIRAALDRSFSEMKQ 60
           MED+CDLR+AV   R +RI GV+A+ A AGDRFPPWSV ETKELLAIRAALD++FSEMKQ
Sbjct: 1   MEDFCDLRRAV---RLHRIAGVNADQA-AGDRFPPWSVLETKELLAIRAALDKNFSEMKQ 60

Query: 61  NRMLWISVADKMKAKGFNRNDEQCKCKWKNLVTRYKVMDXTKLKVRDGCETMDPKALKQQ 120
           NRMLWISVA KMKAKGFNR+DEQCKCKWKNLVTRYK           GCETMDPKALK Q
Sbjct: 61  NRMLWISVAGKMKAKGFNRSDEQCKCKWKNLVTRYK-----------GCETMDPKALKHQ 120

Query: 121 FPFYDDLHTIFTARMQKNWWIEAEDRSGGSKRKATELFSSEDPNGNKIDEDEDEDKVFGS 180
           FPFYDDLHTIFTARMQKNWW+EAE+RSG  KRKA     +EDPNG++  E E+E+K    
Sbjct: 121 FPFYDDLHTIFTARMQKNWWVEAENRSGVLKRKA-----NEDPNGDR--ELENEEK---- 180

Query: 181 TKTKKGTKKGKWRR----EEHERNLKEILKGFVKREMEMERQWREAFRVREEERRLKEEE 240
           TKTK  TKK KW+R    E+HERNL+EILKGF+KREMEMER+WREAFRVREEERRLKEEE
Sbjct: 181 TKTKNVTKKRKWKRDNDLEDHERNLEEILKGFLKREMEMEREWREAFRVREEERRLKEEE 240

Query: 241 WRMKMEAIERERMMMEILWRENEEKRREREEARAEKRDALISALLRSFT 285
           WRMKME IERE+M MEILWRENEEKRREREEARA+K DALISALL + T
Sbjct: 241 WRMKMEGIEREKMTMEILWRENEEKRREREEARAQKTDALISALLTNLT 263

[Close]

BLAST of Lsi01G015500 vs. TAIR 10
Match: AT2G38250.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 223.0 bits (567), Expect = 3.0e-58
Identity = 122/266 (45.86%), Postives = 168/266 (63.16%), Query Frame = 0


Query: 23  AESAVAGDRFPPWSVPETKELLAIRAALDRSFSEMKQNRMLWISVADKMKAKGFNRNDEQ 82
           A     GDRFP WSV ETKEL+ IR  LD++F E K+N++LW  +++KM+ K F R+ EQ
Sbjct: 30  ASPVAVGDRFPQWSVEETKELIGIRGELDQTFMETKRNKLLWEVISNKMRDKSFPRSPEQ 89

Query: 83  CKCKWKNLVTRYKVMDXTKLKVRDGCETMDPKALKQQFPFYDDLHTIFTARMQKNWWIEA 142
           CKCKWKNLVTR+K           GCETM+ +  +QQFPFYDD+  IFT RMQ+  W E+
Sbjct: 90  CKCKWKNLVTRFK-----------GCETMEAETARQQFPFYDDMQNIFTTRMQRMLWAES 149

Query: 143 EDRSGGSKRKATELFSSEDPNGNKIDED----EDEDKVFGSTKTKKGTKKGKWRREEHER 202
           E   GG+   A +   S D     ++E+     ++ K+    K     +KG         
Sbjct: 150 EGGGGGTSGAARKREYSSDEEEENVNEELVDVSNDPKILNPKKNIAKKRKGGSNSSNSNN 209

Query: 203 NLKEILKGFVKREMEMERQWREAFRVREEERRLKEEEWRMKMEAIERERMMMEILWRENE 262
            ++E+L+ F++ ++ ME +WRE +  RE+ER  KEEEWR KME +E+ER+ ME +WR+ E
Sbjct: 210 GVREVLEEFMRHQVRMESEWREGWEAREKERAEKEEEWRRKMEELEKERLAMERMWRDRE 269

Query: 263 EKRREREEARAEKRDALISALLRSFT 285
           E+RR REE RAEKRD+LI+ALL   T
Sbjct: 270 EQRRSREEMRAEKRDSLINALLAKLT 284

[Close]

BLAST of Lsi01G015500 vs. TAIR 10
Match: AT5G01380.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 197.2 bits (500), Expect = 1.8e-50
Identity = 127/274 (46.35%), Postives = 173/274 (63.14%), Query Frame = 0


Query: 29  GDRFPPWSVPETKELLAIRAALDRSFSEMKQNRMLWISVADKMKAKGFNRNDEQCKCKWK 88
           G+R P WS+ ETKELLAIR  LD++F E K+N++LW  VA KM  KGF R+ EQCK KWK
Sbjct: 46  GERIPQWSIEETKELLAIREELDQTFMETKRNKLLWEVVAAKMADKGFVRSAEQCKSKWK 105

Query: 89  NLVTRYKVMDXTKLKVRDGCETMDPKALKQQFPFYDDLHTIFTARMQKNWWIEAEDRSGG 148
           NLVTRYK            CET +P A++QQFPFY+++ +IF ARMQ+  W EA + S  
Sbjct: 106 NLVTRYK-----------ACETTEPDAIRQQFPFYNEIQSIFEARMQRMLWSEATEPSTS 165

Query: 149 SKRKATELFSSED-------PNG-------NKIDEDEDEDKVF---GSTKTKKGTKKGK- 208
           SKRK  + FSS+D       PN        + ++  + E +V     ST  +K  KKGK 
Sbjct: 166 SKRKHHQ-FSSDDEEEEVDEPNQDINEELLSLVETQKRETEVITTSTSTNPRKRAKKGKG 225

Query: 209 ----WRREEHERNLKEILKGFVKREMEMERQWREAFRVREEERRLKEEEWRMKMEAIERE 268
                + E     LK+IL+ F+++ ++ME++WR+A+ ++E ER  +E+EWR +M  +E E
Sbjct: 226 VASGTKAETAGNTLKDILEEFMRQTVKMEKEWRDAWEMKEIEREKREKEWRRRMAELEEE 285

Query: 269 RMMMEILWRENEEKRREREEARAEKRDALISALL 281
           R   E  W E EE+RR REEARA+KRD+LI ALL
Sbjct: 286 RAATERRWMEREEERRLREEARAQKRDSLIDALL 307

[Close]

BLAST of Lsi01G015500 vs. TAIR 10
Match: AT3G25990.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 65.5 bits (158), Expect = 8.1e-11
Identity = 31/106 (29.25%), Postives = 55/106 (51.89%), Query Frame = 0


Query: 31  RFPPWSVPETKELLAIRAALDRSFSEMKQNRMLWISVADKMKAKGFNRNDEQCKCKWKNL 90
           R   W+  ET+ L+++R  +D  F+  K N+ LW  ++ KM+ KGF+R+   C  KW+N+
Sbjct: 51  RAETWAQDETRTLISLRREMDNLFNTSKSNKHLWEQISKKMREKGFDRSPSMCTDKWRNI 110

Query: 91  VTRYKVMDXTKLKVRDGCETMDPKALKQQFPFYDDLHTIFTARMQK 137
           +  +K     + K   G  T        +  +Y+++  IF  R +K
Sbjct: 111 LKEFKKAKQHEDKATSGGST--------KMSYYNEIEDIFRERKKK 148

[Close]

BLAST of Lsi01G015500 vs. TAIR 10
Match: AT1G13450.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 57.0 bits (136), Expect = 2.9e-08
Identity = 24/65 (36.92%), Postives = 37/65 (56.92%), Query Frame = 0


Query: 31  RFPPWSVPETKELLAIRAALDRSFSEMKQNRMLWISVADKMKAKGFNRNDEQCKCKWKNL 90
           R   W   ET+ L+  R  +D  F+  K N+ LW  ++ KM+ KGF+R+   C  KW+NL
Sbjct: 83  RAETWVQDETRSLIMFRRGMDGLFNTSKSNKHLWEQISSKMREKGFDRSPTMCTDKWRNL 142

Query: 91  VTRYK 96
           +  +K
Sbjct: 143 LKEFK 147

[Close]

BLAST of Lsi01G015500 vs. TAIR 10
Match: AT1G13450.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 57.0 bits (136), Expect = 2.9e-08
Identity = 24/65 (36.92%), Postives = 37/65 (56.92%), Query Frame = 0


Query: 31  RFPPWSVPETKELLAIRAALDRSFSEMKQNRMLWISVADKMKAKGFNRNDEQCKCKWKNL 90
           R   W   ET+ L+  R  +D  F+  K N+ LW  ++ KM+ KGF+R+   C  KW+NL
Sbjct: 83  RAETWVQDETRSLIMFRRGMDGLFNTSKSNKHLWEQISSKMREKGFDRSPTMCTDKWRNL 142

Query: 91  VTRYK 96
           +  +K
Sbjct: 143 LKEFK 147

The following BLAST results are available for this feature:

BLAST of Lsi01G015500 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80450	4.2e-57	45.86	Trihelix transcription factor GT-3b OS=Arabidopsis thaliana OX=3702 GN=GT-3B PE=...	[more]
Q9SDW0	2.5e-49	46.35	Trihelix transcription factor GT-3a OS=Arabidopsis thaliana OX=3702 GN=GT-3A PE=...	[more]
Q9LU92	1.1e-09	29.25	Trihelix transcription factor GT-4 OS=Arabidopsis thaliana OX=3702 GN=GT-4 PE=2 ...	[more]
Q9FX53	4.0e-07	36.92	Trihelix transcription factor GT-1 OS=Arabidopsis thaliana OX=3702 GN=GT-1 PE=1 ...	[more]

BLAST of Lsi01G015500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZY4	7.2e-108	77.35	Myb-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G310210 PE...	[more]
A0A1S3CKZ2	3.7e-104	76.12	trihelix transcription factor GT-3b isoform X1 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A5A7UVF8	1.1e-103	76.12	Trihelix transcription factor GT-3b isoform X2 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3CKY0	1.1e-103	76.12	trihelix transcription factor GT-3b isoform X2 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A5D3DZE6	2.4e-103	75.78	Trihelix transcription factor GT-3b isoform X2 OS=Cucumis melo var. makuwa OX=11...	[more]

BLAST of Lsi01G015500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883623.1	6.2e-122	83.45	trihelix transcription factor GT-3b-like [Benincasa hispida]	[more]
XP_011653700.1	1.5e-107	77.35	trihelix transcription factor GT-3b [Cucumis sativus] >XP_031739717.1 trihelix t...	[more]
XP_008464201.1	7.6e-104	76.12	PREDICTED: trihelix transcription factor GT-3b isoform X1 [Cucumis melo] >XP_008...	[more]
XP_008464203.1	2.2e-103	76.12	PREDICTED: trihelix transcription factor GT-3b isoform X2 [Cucumis melo] >KAA005...	[more]
TYK29247.1	4.9e-103	75.78	trihelix transcription factor GT-3b isoform X2 [Cucumis melo var. makuwa]	[more]

BLAST of Lsi01G015500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G38250.1	3.0e-58	45.86	Homeodomain-like superfamily protein	[more]
AT5G01380.1	1.8e-50	46.35	Homeodomain-like superfamily protein	[more]
AT3G25990.1	8.1e-11	29.25	Homeodomain-like superfamily protein	[more]
AT1G13450.1	2.9e-08	36.92	Homeodomain-like superfamily protein	[more]
AT1G13450.2	2.9e-08	36.92	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 249..276
None	No IPR available	GENE3D	1.10.10.60		coord: 35..96 e-value: 2.1E-17 score: 64.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..189
None	No IPR available	PANTHER	PTHR21654	FAMILY NOT NAMED	coord: 1..282
None	No IPR available	PANTHER	PTHR21654:SF93	SUBFAMILY NOT NAMED	coord: 1..282
None	No IPR available	CDD	cd12203	GT1	coord: 35..95 e-value: 1.42455E-16 score: 70.3867
IPR044822	Myb/SANT-like DNA-binding domain 4	PFAM	PF13837	Myb_DNA-bind_4	coord: 34..127 e-value: 2.1E-16 score: 60.1
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 34..91 score: 7.282382

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G015500.1	Lsi01G015500.1	mRNA