Lsi01G013620 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G013620
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: protamine P1 family protein .
Location	chr01: 11803361 .. 11804245 (-)
RNA-Seq Expression	Lsi01G013620
Synteny	Lsi01G013620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCAATTATCGAAGTCGATTTCCAGTCCCAGTCGGACCGACTTGTTTCCACCGCCATTGATGAGTTTTCTCAGAGCCGATGTCGGAAATCGGAGTAAAAGCGGACGGTCTCGCTCCAGTCCGATCTTCGTTAGGAAGAAGAACATCGCCATTGAAACTCAAGAGCCGTCCTCTCCGAAGGTTACTTGTATGGGACAAGTCCGCGCCAATAAACGCTCCTCTAATAAAACTCCTGCCGCTCGATGCCGGTGGATTAGAAGCGTCCTCTCTTTCAATCGACGCCATTGTCGAACCTTCTGGAACAAGTCGGTGATGCTCTTCCGAATAAAGCGTGAAATTAGACGAAAATCATCAATCTCCGAATCTCGCGTCGGAAACGAAGCGGAAGATTCGGAGAAAGATGAAGAGAACGACGGAGGAGCTAGGGATGCGGTTTTTGCGTCTTCAGTGCCATCGCCGCCGAAAAACGCTCTCATTCTGACGAGATGTAGATCTGCGCCAAATCGGTCGTCGTTTTACGGCAATCGGTACCGGAGTTCGGCGATTACAAGCGACAGAACTGGAGAAGAAGTAGAAAAGAAAACAGAGCGCGATATTGGAAACAGCGCGGCTTCCAAAATTGAGTTGCGAAACTCGGAGAGATTGTTCAATAAACTAGCAAATGCAAAGGGTGATGGAGATTCTATATCTATACATAGCAAAGAGAGGAAAATGGAGGCAAAATGGAGGATGAATCCGAACCTGATTCTGACGAGATGTAAATCGGAACCTGCGAGAATTGCAGAGAAACTGTACGGAGAATTGAATGTTCGGGAAGAAGAAAGGTCGGTTATGGCTAAGAACAATTCTTACTTATTGAATAACTTGCGATTAGATGATTGA

mRNA sequence

ATGAAGCAATTATCGAAGTCGATTTCCAGTCCCAGTCGGACCGACTTGTTTCCACCGCCATTGATGAGTTTTCTCAGAGCCGATGTCGGAAATCGGAGTAAAAGCGGACGGTCTCGCTCCAGTCCGATCTTCGTTAGGAAGAAGAACATCGCCATTGAAACTCAAGAGCCGTCCTCTCCGAAGGTTACTTGTATGGGACAAGTCCGCGCCAATAAACGCTCCTCTAATAAAACTCCTGCCGCTCGATGCCGGTGGATTAGAAGCGTCCTCTCTTTCAATCGACGCCATTGTCGAACCTTCTGGAACAAGTCGGTGATGCTCTTCCGAATAAAGCGTGAAATTAGACGAAAATCATCAATCTCCGAATCTCGCGTCGGAAACGAAGCGGAAGATTCGGAGAAAGATGAAGAGAACGACGGAGGAGCTAGGGATGCGGTTTTTGCGTCTTCAGTGCCATCGCCGCCGAAAAACGCTCTCATTCTGACGAGATGTAGATCTGCGCCAAATCGGTCGTCGTTTTACGGCAATCGGTACCGGAGTTCGGCGATTACAAGCGACAGAACTGGAGAAGAAGTAGAAAAGAAAACAGAGCGCGATATTGGAAACAGCGCGGCTTCCAAAATTGAGTTGCGAAACTCGGAGAGATTGTTCAATAAACTAGCAAATGCAAAGGGTGATGGAGATTCTATATCTATACATAGCAAAGAGAGGAAAATGGAGGCAAAATGGAGGATGAATCCGAACCTGATTCTGACGAGATGTAAATCGGAACCTGCGAGAATTGCAGAGAAACTGTACGGAGAATTGAATGTTCGGGAAGAAGAAAGGTCGGTTATGGCTAAGAACAATTCTTACTTATTGAATAACTTGCGATTAGATGATTGA

Coding sequence (CDS)

ATGAAGCAATTATCGAAGTCGATTTCCAGTCCCAGTCGGACCGACTTGTTTCCACCGCCATTGATGAGTTTTCTCAGAGCCGATGTCGGAAATCGGAGTAAAAGCGGACGGTCTCGCTCCAGTCCGATCTTCGTTAGGAAGAAGAACATCGCCATTGAAACTCAAGAGCCGTCCTCTCCGAAGGTTACTTGTATGGGACAAGTCCGCGCCAATAAACGCTCCTCTAATAAAACTCCTGCCGCTCGATGCCGGTGGATTAGAAGCGTCCTCTCTTTCAATCGACGCCATTGTCGAACCTTCTGGAACAAGTCGGTGATGCTCTTCCGAATAAAGCGTGAAATTAGACGAAAATCATCAATCTCCGAATCTCGCGTCGGAAACGAAGCGGAAGATTCGGAGAAAGATGAAGAGAACGACGGAGGAGCTAGGGATGCGGTTTTTGCGTCTTCAGTGCCATCGCCGCCGAAAAACGCTCTCATTCTGACGAGATGTAGATCTGCGCCAAATCGGTCGTCGTTTTACGGCAATCGGTACCGGAGTTCGGCGATTACAAGCGACAGAACTGGAGAAGAAGTAGAAAAGAAAACAGAGCGCGATATTGGAAACAGCGCGGCTTCCAAAATTGAGTTGCGAAACTCGGAGAGATTGTTCAATAAACTAGCAAATGCAAAGGGTGATGGAGATTCTATATCTATACATAGCAAAGAGAGGAAAATGGAGGCAAAATGGAGGATGAATCCGAACCTGATTCTGACGAGATGTAAATCGGAACCTGCGAGAATTGCAGAGAAACTGTACGGAGAATTGAATGTTCGGGAAGAAGAAAGGTCGGTTATGGCTAAGAACAATTCTTACTTATTGAATAACTTGCGATTAGATGATTGA

Protein sequence

MKQLSKSISSPSRTDLFPPPLMSFLRADVGNRSKSGRSRSSPIFVRKKNIAIETQEPSSPKVTCMGQVRANKRSSNKTPAARCRWIRSVLSFNRRHCRTFWNKSVMLFRIKREIRRKSSISESRVGNEAEDSEKDEENDGGARDAVFASSVPSPPKNALILTRCRSAPNRSSFYGNRYRSSAITSDRTGEEVEKKTERDIGNSAASKIELRNSERLFNKLANAKGDGDSISIHSKERKMEAKWRMNPNLILTRCKSEPARIAEKLYGELNVREEERSVMAKNNSYLLNNLRLDD

Homology

[Close]

BLAST of Lsi01G013620 vs. ExPASy TrEMBL
Match: A0A1S3BN59 (uncharacterized protein LOC103491651 OS=Cucumis melo OX=3656 GN=LOC103491651 PE=4 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 6.9e-114
Identity = 231/292 (79.11%), Postives = 248/292 (84.93%), Query Frame = 0


Query: 1   MKQLSKSISSPSRTDLFPPPLMSFLRADVGNRSKSGRSRSSPIFVRKKNIAIETQEPSSP 60
           MKQLSKSISSPSRTDLFPPPLMSFLRAD GNRSKS RSRSSPIF+RKKN+AIET+EPSSP
Sbjct: 1   MKQLSKSISSPSRTDLFPPPLMSFLRADAGNRSKSSRSRSSPIFIRKKNVAIETEEPSSP 60

Query: 61  KVTCMGQVRANKRSSNKTPAARCRWIRSVLSFNRRHCRTFWNKSVMLFRIKREIRRKSSI 120
           KVTCMGQVR NKRSSNKTPA RCRWIRSVLSFNRRHCRTFWN+S MLFR KREIRR   I
Sbjct: 61  KVTCMGQVRTNKRSSNKTPAVRCRWIRSVLSFNRRHCRTFWNRSAMLFRGKREIRR---I 120

Query: 121 SESRVGNEAEDSEKDEENDGGA-RDAVFA-SSVPSPPKNALILTRCRSAPNRSSFYGNRY 180
           SESRVGNEAEDSEKDEE+D G  RDAV+A SSVPSPPKNALILTRCRS PNRSSF  NRY
Sbjct: 121 SESRVGNEAEDSEKDEEDDDGRDRDAVYASSSVPSPPKNALILTRCRSTPNRSSFNDNRY 180

Query: 181 RSSAITSDRTGEEVEKKTERDIGNSAASKIELRNSERLFNKLANAKGDGDSISIHSKERK 240
           RSS+ITSD +  E E+KTER  GN+ ASKIELRNSERL  KL ++KGDGD  S++     
Sbjct: 181 RSSSITSDGSTVEEEEKTERGFGNNTASKIELRNSERLLKKLESSKGDGDCKSVNG---- 240

Query: 241 MEAKWRMNPNLILTRCKSEPARIAEKLYGELNVREEERSVMAKNNSYLLNNL 291
                  N NLILTRCKSEPARIAEKLYGELN++EEER VM K NSY+LNNL
Sbjct: 241 -------NRNLILTRCKSEPARIAEKLYGELNLQEEERWVMNKKNSYILNNL 278

[Close]

BLAST of Lsi01G013620 vs. ExPASy TrEMBL
Match: A0A5A7TVU1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G00730 PE=4 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 8.8e-109
Identity = 222/282 (78.72%), Postives = 239/282 (84.75%), Query Frame = 0


Query: 1   MKQLSKSISSPSRTDLFPPPLMSFLRADVGNRSKSGRSRSSPIFVRKKNIAIETQEPSSP 60
           MKQLSKSISSPSRTDLFPPPLMSFLRAD GNRSKS RSRSSPIF+RKKN+AIET+EPSSP
Sbjct: 1   MKQLSKSISSPSRTDLFPPPLMSFLRADAGNRSKSSRSRSSPIFIRKKNVAIETEEPSSP 60

Query: 61  KVTCMGQVRANKRSSNKTPAARCRWIRSVLSFNRRHCRTFWNKSVMLFRIKREIRRKSSI 120
           KVTCMGQVR NKRSSNKTPA RCRWIRSVLSFNRRHCRTFWN+S MLFR KREIRR   I
Sbjct: 61  KVTCMGQVRTNKRSSNKTPAVRCRWIRSVLSFNRRHCRTFWNRSAMLFRGKREIRR---I 120

Query: 121 SESRVGNEAEDSEKDEENDGGA-RDAVFA-SSVPSPPKNALILTRCRSAPNRSSFYGNRY 180
           SESRVGNEAEDSEKDEE+D G  RDAV+A SSVPSPPKNALILTRCRS PNRSSF  NRY
Sbjct: 121 SESRVGNEAEDSEKDEEDDDGRDRDAVYASSSVPSPPKNALILTRCRSTPNRSSFNDNRY 180

Query: 181 RSSAITSDRTGEEVEKKTERDIGNSAASKIELRNSERLFNKLANAKGDGDSISIHSKERK 240
           RSS+ITSD +  E E+KTER  GN+ ASKIELRNSERL  KL ++KGDGD  S++     
Sbjct: 181 RSSSITSDGSTVEEEEKTERGFGNNTASKIELRNSERLLKKLESSKGDGDCKSVNG---- 240

Query: 241 MEAKWRMNPNLILTRCKSEPARIAEKLYGELNVREEERSVMA 281
                  N NLILTRCKSEPARIAEKLYGELN++EEER  +A
Sbjct: 241 -------NRNLILTRCKSEPARIAEKLYGELNLQEEERLNLA 268

[Close]

BLAST of Lsi01G013620 vs. ExPASy TrEMBL
Match: A0A0A0KK43 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G439970 PE=4 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 5.5e-103
Identity = 221/293 (75.43%), Postives = 238/293 (81.23%), Query Frame = 0


Query: 1   MKQLSKSISSPSRTDLFPPPLMSFLRADVGNRSKSGRSRSSPIFVRKKNIAIETQEPSSP 60
           MKQLSKSISSPSRTDLFPPPLMSFLRAD GNRSKS RSRSSPIFV KKN+AIETQEPSSP
Sbjct: 1   MKQLSKSISSPSRTDLFPPPLMSFLRADAGNRSKSSRSRSSPIFVGKKNVAIETQEPSSP 60

Query: 61  KVTCMGQVRANKRSSNKTPAARCRWIRSVLSFNRRHCRTFWNKSVMLFRIKREIRRKSSI 120
           KVTCMGQVR NK SSNKTPA RCRWIRSVLSFNRRHCRTFWN+S ML R KREIRR   I
Sbjct: 61  KVTCMGQVRTNKHSSNKTPAVRCRWIRSVLSFNRRHCRTFWNRSAMLCRGKREIRR---I 120

Query: 121 SESRVGNEAEDSEKDEENDGGA-RDAVFAS-SVPSPPKNALILTRCRSAPNRSSFYGNRY 180
           SESRVGNEAEDSEKDEE D G   DAV++S SVPSPPKNALIL+RCRSAPNRSSF G RY
Sbjct: 121 SESRVGNEAEDSEKDEEEDDGRDGDAVYSSFSVPSPPKNALILSRCRSAPNRSSFNGTRY 180

Query: 181 RSSAITSDRTGE-EVEKKTERDIGNSAASKIELRNSERLFNKLANAKGDGDSISIHSKER 240
           RSS+ITSD T E E E+KTE    N+AASKIEL  SERL  K+ ++KGDGDS S++    
Sbjct: 181 RSSSITSDGTVEVEEEEKTEGGFRNNAASKIELGKSERLLKKVESSKGDGDSKSVNGNR- 240

Query: 241 KMEAKWRMNPNLILTRCKSEPARIAEKLYGEL-NVREEERSVMAKNNSYLLNN 290
                   N NLILTR KSEP RIAEKLYGEL N++EE+R VM K   Y+LNN
Sbjct: 241 --------NLNLILTRSKSEPGRIAEKLYGELNNLQEEKRWVMNKKKCYILNN 281

[Close]

BLAST of Lsi01G013620 vs. ExPASy TrEMBL
Match: A0A6J1ECV0 (uncharacterized protein LOC111433021 OS=Cucurbita moschata OX=3662 GN=LOC111433021 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 5.9e-97
Identity = 197/269 (73.23%), Postives = 222/269 (82.53%), Query Frame = 0


Query: 1   MKQLSKSISSPSRTDLFPPPLMSFLRADVGNRSKSGRSRSSPIFVRKKNIAIETQEPSSP 60
           MKQ  K ISSPSR DLFPPPLMSFLRAD GNRSKSGRSRSSPIF+RKKN+AIETQEPSSP
Sbjct: 1   MKQSVKPISSPSRIDLFPPPLMSFLRADAGNRSKSGRSRSSPIFIRKKNVAIETQEPSSP 60

Query: 61  KVTCMGQVRANKRSSNKTPAARCRWIRSVLSFNRRHCRTFWNKSVMLFRIKREIRRKSSI 120
           KVTCMGQVR NKRSS + PA RCRWIRSVLSFNRR CRTFWN+S M F+  REIRRKSSI
Sbjct: 61  KVTCMGQVRTNKRSS-RPPAKRCRWIRSVLSFNRRQCRTFWNRSTMFFQGNREIRRKSSI 120

Query: 121 SESRVGNEAEDSEKDEENDGGARDAVFASSVPSPPKNALILTRCRSAPNRSSFYGNRYRS 180
           +ESRV +EAEDSE++EE++G ARD VFASS PSPPKNALILTRCRSAP+RSSFY NRY  
Sbjct: 121 TESRVRDEAEDSEQNEESEGAARDEVFASSAPSPPKNALILTRCRSAPHRSSFYCNRYEI 180

Query: 181 SAITSDRTGEE--VEKKTERDIGNSAASKIELRNSERLFNKLANAKGDGDSISIHSKERK 240
           S+I SDRT EE    +KTE +  N AASKIE +NSER+F KL N+ G+ D  S+++KE K
Sbjct: 181 SSIRSDRTEEEEGEGEKTEHNNRNGAASKIESQNSERMFRKLENSNGEEDRSSVNNKESK 240

Query: 241 MEAKWRMNPNLILTRCKSEPARIAEKLYG 268
           +E     N +LILTRCKSEP RI E+LYG
Sbjct: 241 IEENSMSNRSLILTRCKSEPGRIREELYG 268

[Close]

BLAST of Lsi01G013620 vs. ExPASy TrEMBL
Match: A0A6J1IHY6 (uncharacterized protein LOC111477626 OS=Cucurbita maxima OX=3661 GN=LOC111477626 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 4.2e-95
Identity = 196/267 (73.41%), Postives = 217/267 (81.27%), Query Frame = 0


Query: 1   MKQLSKSISSPSRTDLFPPPLMSFLRADVGNRSKSGRSRSSPIFVRKKNIAIETQEPSSP 60
           MKQ  K ISSPSR DLFPPPLMSFLRAD GNRSKSGRSRSSPIF+RKKN+ IETQEPSSP
Sbjct: 1   MKQSVKPISSPSRIDLFPPPLMSFLRADAGNRSKSGRSRSSPIFIRKKNVTIETQEPSSP 60

Query: 61  KVTCMGQVRANKRSSNKTPAARCRWIRSVLSFNRRHCRTFWNKSVMLFRIKREIRRKSSI 120
           KVTCMGQVR NKRSS + PA RCRWIRSVLSFNRRHCRTFWN+S M F+ K EIRRKSSI
Sbjct: 61  KVTCMGQVRTNKRSS-RPPAKRCRWIRSVLSFNRRHCRTFWNRSTMFFQGKPEIRRKSSI 120

Query: 121 SESRVGNEAEDSEKDEENDGGARDAVFASSVPSPPKNALILTRCRSAPNRSSFYGNRYRS 180
           +ESRV +EAEDSE++EE++G ARDAVFASS PSPPKNALILTRCRSAP+RSSFYGN    
Sbjct: 121 TESRVRDEAEDSEQNEESEGAARDAVFASSAPSPPKNALILTRCRSAPHRSSFYGN---- 180

Query: 181 SAITSDRTGEEVEKKTERDIGNSAASKIELRNSERLFNKLANAKGDGDSISIHSKERKME 240
             I SDRT EE +       GN AASKIE RNSER+F KL N+ G+ D  S+++KE K+E
Sbjct: 181 -LIRSDRTEEEGKGGN----GNRAASKIESRNSERMFKKLENSNGEEDRSSVNNKESKIE 240

Query: 241 AKWRMNPNLILTRCKSEPARIAEKLYG 268
                N +LILTRCKSEP RI EKLYG
Sbjct: 241 ENSMSNRSLILTRCKSEPGRIREKLYG 257

[Close]

BLAST of Lsi01G013620 vs. NCBI nr
Match: XP_038882779.1 (uncharacterized protein LOC120073931 [Benincasa hispida])

HSP 1 Score: 423.3 bits (1087), Expect = 1.7e-114
Identity = 229/278 (82.37%), Postives = 245/278 (88.13%), Query Frame = 0


Query: 1   MKQLSKSISSPSRTDLFPPPLMSFLRADVGNRSKSGRSRSSPIFVRKKN-IAIETQEPSS 60
           MK+LSKSISSPSRTDLFPPPLMSFLRAD GNRSKSGRSRSSPIFV KKN +AIETQEPSS
Sbjct: 1   MKKLSKSISSPSRTDLFPPPLMSFLRADAGNRSKSGRSRSSPIFVGKKNVVAIETQEPSS 60

Query: 61  PKVTCMGQVRANKRSSNKTPAARCRWIRSVLSFNRRHCRTFWNKSVMLFRIKREIRRKSS 120
           PKVTCMGQVRA   SSNKTPAARCRWIRSVLSFNRR+CRTFWN S M FR K EIRRKSS
Sbjct: 61  PKVTCMGQVRA---SSNKTPAARCRWIRSVLSFNRRNCRTFWNSSAMFFRRKYEIRRKSS 120

Query: 121 ISESRVGNEAEDSEKDEENDGGARDAVFASSVPSPPKNALILTRCRSAPNRSSFYGNRYR 180
           I ESRVGNEAEDSEKDEENDGGARDAVF+SSVPSPPKNALILTRCRSAPNR+SFYGNRYR
Sbjct: 121 IFESRVGNEAEDSEKDEENDGGARDAVFSSSVPSPPKNALILTRCRSAPNRASFYGNRYR 180

Query: 181 SSAITSDRTGEEVEKKTERDIGNSAASKIELRNSERLFNKLANAKGDGDSISIHSKERKM 240
           S  ITSD +GEE E+K E D+GNSAAS+IELR  E L+NK+ NAKGDGD   +  KER M
Sbjct: 181 SRPITSDGSGEE-EEKAEEDLGNSAASEIELRKKEGLWNKVENAKGDGDCECVDRKERTM 240

Query: 241 EAKWRMNPNLILTRCKSEPARIAEKLYGELNVREEERS 278
           E K  +N  LILTRCKSEPARIAEK+YGELN+REEER+
Sbjct: 241 EEKSMLNRKLILTRCKSEPARIAEKMYGELNLREEERN 274

[Close]

BLAST of Lsi01G013620 vs. NCBI nr
Match: XP_008449922.1 (PREDICTED: uncharacterized protein LOC103491651 [Cucumis melo])

HSP 1 Score: 420.2 bits (1079), Expect = 1.4e-113
Identity = 231/292 (79.11%), Postives = 248/292 (84.93%), Query Frame = 0


Query: 1   MKQLSKSISSPSRTDLFPPPLMSFLRADVGNRSKSGRSRSSPIFVRKKNIAIETQEPSSP 60
           MKQLSKSISSPSRTDLFPPPLMSFLRAD GNRSKS RSRSSPIF+RKKN+AIET+EPSSP
Sbjct: 1   MKQLSKSISSPSRTDLFPPPLMSFLRADAGNRSKSSRSRSSPIFIRKKNVAIETEEPSSP 60

Query: 61  KVTCMGQVRANKRSSNKTPAARCRWIRSVLSFNRRHCRTFWNKSVMLFRIKREIRRKSSI 120
           KVTCMGQVR NKRSSNKTPA RCRWIRSVLSFNRRHCRTFWN+S MLFR KREIRR   I
Sbjct: 61  KVTCMGQVRTNKRSSNKTPAVRCRWIRSVLSFNRRHCRTFWNRSAMLFRGKREIRR---I 120

Query: 121 SESRVGNEAEDSEKDEENDGGA-RDAVFA-SSVPSPPKNALILTRCRSAPNRSSFYGNRY 180
           SESRVGNEAEDSEKDEE+D G  RDAV+A SSVPSPPKNALILTRCRS PNRSSF  NRY
Sbjct: 121 SESRVGNEAEDSEKDEEDDDGRDRDAVYASSSVPSPPKNALILTRCRSTPNRSSFNDNRY 180

Query: 181 RSSAITSDRTGEEVEKKTERDIGNSAASKIELRNSERLFNKLANAKGDGDSISIHSKERK 240
           RSS+ITSD +  E E+KTER  GN+ ASKIELRNSERL  KL ++KGDGD  S++     
Sbjct: 181 RSSSITSDGSTVEEEEKTERGFGNNTASKIELRNSERLLKKLESSKGDGDCKSVNG---- 240

Query: 241 MEAKWRMNPNLILTRCKSEPARIAEKLYGELNVREEERSVMAKNNSYLLNNL 291
                  N NLILTRCKSEPARIAEKLYGELN++EEER VM K NSY+LNNL
Sbjct: 241 -------NRNLILTRCKSEPARIAEKLYGELNLQEEERWVMNKKNSYILNNL 278

[Close]

BLAST of Lsi01G013620 vs. NCBI nr
Match: KAA0047280.1 (uncharacterized protein E6C27_scaffold908G00730 [Cucumis melo var. makuwa])

HSP 1 Score: 403.3 bits (1035), Expect = 1.8e-108
Identity = 222/282 (78.72%), Postives = 239/282 (84.75%), Query Frame = 0


Query: 1   MKQLSKSISSPSRTDLFPPPLMSFLRADVGNRSKSGRSRSSPIFVRKKNIAIETQEPSSP 60
           MKQLSKSISSPSRTDLFPPPLMSFLRAD GNRSKS RSRSSPIF+RKKN+AIET+EPSSP
Sbjct: 1   MKQLSKSISSPSRTDLFPPPLMSFLRADAGNRSKSSRSRSSPIFIRKKNVAIETEEPSSP 60

Query: 61  KVTCMGQVRANKRSSNKTPAARCRWIRSVLSFNRRHCRTFWNKSVMLFRIKREIRRKSSI 120
           KVTCMGQVR NKRSSNKTPA RCRWIRSVLSFNRRHCRTFWN+S MLFR KREIRR   I
Sbjct: 61  KVTCMGQVRTNKRSSNKTPAVRCRWIRSVLSFNRRHCRTFWNRSAMLFRGKREIRR---I 120

Query: 121 SESRVGNEAEDSEKDEENDGGA-RDAVFA-SSVPSPPKNALILTRCRSAPNRSSFYGNRY 180
           SESRVGNEAEDSEKDEE+D G  RDAV+A SSVPSPPKNALILTRCRS PNRSSF  NRY
Sbjct: 121 SESRVGNEAEDSEKDEEDDDGRDRDAVYASSSVPSPPKNALILTRCRSTPNRSSFNDNRY 180

Query: 181 RSSAITSDRTGEEVEKKTERDIGNSAASKIELRNSERLFNKLANAKGDGDSISIHSKERK 240
           RSS+ITSD +  E E+KTER  GN+ ASKIELRNSERL  KL ++KGDGD  S++     
Sbjct: 181 RSSSITSDGSTVEEEEKTERGFGNNTASKIELRNSERLLKKLESSKGDGDCKSVNG---- 240

Query: 241 MEAKWRMNPNLILTRCKSEPARIAEKLYGELNVREEERSVMA 281
                  N NLILTRCKSEPARIAEKLYGELN++EEER  +A
Sbjct: 241 -------NRNLILTRCKSEPARIAEKLYGELNLQEEERLNLA 268

[Close]

BLAST of Lsi01G013620 vs. NCBI nr
Match: XP_011658465.2 (uncharacterized protein LOC105436016 [Cucumis sativus] >KGN48131.1 hypothetical protein Csa_004357 [Cucumis sativus])

HSP 1 Score: 384.0 bits (985), Expect = 1.1e-102
Identity = 221/293 (75.43%), Postives = 238/293 (81.23%), Query Frame = 0


Query: 1   MKQLSKSISSPSRTDLFPPPLMSFLRADVGNRSKSGRSRSSPIFVRKKNIAIETQEPSSP 60
           MKQLSKSISSPSRTDLFPPPLMSFLRAD GNRSKS RSRSSPIFV KKN+AIETQEPSSP
Sbjct: 1   MKQLSKSISSPSRTDLFPPPLMSFLRADAGNRSKSSRSRSSPIFVGKKNVAIETQEPSSP 60

Query: 61  KVTCMGQVRANKRSSNKTPAARCRWIRSVLSFNRRHCRTFWNKSVMLFRIKREIRRKSSI 120
           KVTCMGQVR NK SSNKTPA RCRWIRSVLSFNRRHCRTFWN+S ML R KREIRR   I
Sbjct: 61  KVTCMGQVRTNKHSSNKTPAVRCRWIRSVLSFNRRHCRTFWNRSAMLCRGKREIRR---I 120

Query: 121 SESRVGNEAEDSEKDEENDGGA-RDAVFAS-SVPSPPKNALILTRCRSAPNRSSFYGNRY 180
           SESRVGNEAEDSEKDEE D G   DAV++S SVPSPPKNALIL+RCRSAPNRSSF G RY
Sbjct: 121 SESRVGNEAEDSEKDEEEDDGRDGDAVYSSFSVPSPPKNALILSRCRSAPNRSSFNGTRY 180

Query: 181 RSSAITSDRTGE-EVEKKTERDIGNSAASKIELRNSERLFNKLANAKGDGDSISIHSKER 240
           RSS+ITSD T E E E+KTE    N+AASKIEL  SERL  K+ ++KGDGDS S++    
Sbjct: 181 RSSSITSDGTVEVEEEEKTEGGFRNNAASKIELGKSERLLKKVESSKGDGDSKSVNGNR- 240

Query: 241 KMEAKWRMNPNLILTRCKSEPARIAEKLYGEL-NVREEERSVMAKNNSYLLNN 290
                   N NLILTR KSEP RIAEKLYGEL N++EE+R VM K   Y+LNN
Sbjct: 241 --------NLNLILTRSKSEPGRIAEKLYGELNNLQEEKRWVMNKKKCYILNN 281

[Close]

BLAST of Lsi01G013620 vs. NCBI nr
Match: XP_023543942.1 (uncharacterized protein LOC111803666 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 370.9 bits (951), Expect = 1.0e-98
Identity = 199/269 (73.98%), Postives = 224/269 (83.27%), Query Frame = 0


Query: 1   MKQLSKSISSPSRTDLFPPPLMSFLRADVGNRSKSGRSRSSPIFVRKKNIAIETQEPSSP 60
           MKQ  K ISSPSR DLFPPPLMSFLRAD GNRSKSGRSRSSPIF+RKKN+AIETQEPSSP
Sbjct: 1   MKQSVKPISSPSRIDLFPPPLMSFLRADAGNRSKSGRSRSSPIFIRKKNVAIETQEPSSP 60

Query: 61  KVTCMGQVRANKRSSNKTPAARCRWIRSVLSFNRRHCRTFWNKSVMLFRIKREIRRKSSI 120
           KVTCMGQVR NKRSS + PA RCRWIRSVLSFNRRHCRTFWN+S M F+ KREIRRKSSI
Sbjct: 61  KVTCMGQVRTNKRSS-RPPAKRCRWIRSVLSFNRRHCRTFWNRSTMFFQGKREIRRKSSI 120

Query: 121 SESRVGNEAEDSEKDEENDGGARDAVFASSVPSPPKNALILTRCRSAPNRSSFYGNRYRS 180
           +ESRV +EAEDSE++EE++G ARD VFASS PSPPKNALILTRCRSAP+RSSFYGNRY  
Sbjct: 121 TESRVRDEAEDSEQNEESEGAARDEVFASSAPSPPKNALILTRCRSAPHRSSFYGNRYEI 180

Query: 181 SAITSDRTGEE--VEKKTERDIGNSAASKIELRNSERLFNKLANAKGDGDSISIHSKERK 240
           S+I SDR  EE    +KTE + GN AASK E +NSER+F KL N+ G+ D  S+++KE K
Sbjct: 181 SSIRSDRAEEEEGEGEKTEHNNGNGAASKNESQNSERMFRKLENSNGEEDRSSVNNKESK 240

Query: 241 MEAKWRMNPNLILTRCKSEPARIAEKLYG 268
           +E     N +LILTRCKSEP RI E+LYG
Sbjct: 241 IEENSMSNRSLILTRCKSEPGRIREELYG 268

[Close]

BLAST of Lsi01G013620 vs. TAIR 10
Match: AT5G03110.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: protamine P1 family protein (TAIR:AT2G37100.1); Has 81 Blast hits to 73 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 114.0 bits (284), Expect = 2.0e-25
Identity = 99/294 (33.67%), Postives = 144/294 (48.98%), Query Frame = 0


Query: 6   KSISSPSRTDLFPPPLMSFLR--ADVGNRSKS-----GRSRSSPIFVRK-KNIAIETQEP 65
           + +SSP R + +PPP M FLR  ++ G+ S+S     GRSR+SP+FVR+ K+ A   QEP
Sbjct: 6   RPVSSPGRVEKYPPPFMGFLRSKSNGGSTSRSRSRSRGRSRASPLFVRRNKSAAAVAQEP 65

Query: 66  SSPKVTCMGQVRANKRSSNKTPAA-------RCRWIRSVLSFN----RRHCRTFWNK--- 125
           SSPKVTCMGQVR N+      P +       RC W+R+   +N    +    TFW K   
Sbjct: 66  SSPKVTCMGQVRVNRSKPKIKPESRDNPTRRRCEWLRNASFYNKFAGKIKTMTFWPKWRL 125

Query: 126 ---SVMLFRIKREIRRKSSISESRVGNEAEDSEKDEENDGGARDAVFASSVPSPPKNALI 185
              S     +K +   +S +      +  E  E+ E  +      +F S   +PP NAL+
Sbjct: 126 CSFSCACRNLKEKDSPRSQLDHPTTESVREIKEEIEGEENFEIPKLFVSPATTPPINALL 185

Query: 186 LTRCRSAPNRSSFYGNRYRSSAITSDRTGEEVEKKTERDIGNSAASKIELRNSERLFNKL 245
           LTR RSAP RSS    R+              E+  +R++ +    + E  +SE    K+
Sbjct: 186 LTRSRSAPYRSSSLAFRF-------------WEENNQREVESQQNVRSEKTDSEVPIEKI 245

Query: 246 ANAKGDGDSISIHSKERKMEAKWRMNPNLILTRCKSEPARIAEKLYGELNVREE 275
            N   + + +    ++ +   K R     +LTR KSEPARI EK+   L   EE
Sbjct: 246 -NGFHEPEYV---DRDEEEFTKLRFVRQPVLTRSKSEPARIGEKMMVLLPDEEE 282

[Close]

BLAST of Lsi01G013620 vs. TAIR 10
Match: AT2G37100.1 (protamine P1 family protein )

HSP 1 Score: 102.4 bits (254), Expect = 6.2e-22
Identity = 107/304 (35.20%), Postives = 133/304 (43.75%), Query Frame = 0


Query: 5   SKSISSPSRTDLFPPPLMSFLRADVGNRSKSGRSRSSPIFVRKKN--IAIETQEPSSPKV 64
           S+ +SSP RT+  PP LM FLR    +RS+S RSR  PIF R+KN   A ETQEP+SPKV
Sbjct: 6   SRPVSSPGRTE-NPPLLMRFLRTKSRSRSRS-RSR-RPIFFRRKNASAAAETQEPTSPKV 65

Query: 65  TCMGQVRANKRSSNKTPAA--------------RCRWIRSVLSFNRRHCRTF-------- 124
           TCMGQVR N+    K   A              RC W++     N   C +F        
Sbjct: 66  TCMGQVRINRSKKPKPETARVSGGATERRRQSRRCGWVK-----NAFPCHSFTGIIKPTC 125

Query: 125 ----WNK----SVMLFRIKREIRRKSSISESRVGNEAEDSEKDEENDGGARDAVFASSVP 184
               W K    S   F  K E R  SS SE   G    + E+ EE          ASS  
Sbjct: 126 FSPVWRKWKSFSHASFSKKSEKRSSSSRSEPIFGRSTVEPEEPEETRKEENQEEEASSCK 185

Query: 185 S----PPKNALILTRCRSAPNRSSFYGNRYRSSAITSDRTGEEVEKKTERDIGNSAASKI 244
           S    PP+NA +LTRCRSAP RS    N        +++   +    +E    +      
Sbjct: 186 SFTATPPRNAFLLTRCRSAPYRSPSSANSLFEDQEETNKAPFQRHASSENVSVSEEPKTS 245

Query: 245 ELRNSERLFNKLANAKGDGDSISIHSKERKMEAKWRMNPNLILTRCKSEPARIAEKLYGE 273
               +ERL         D    S  S+E K          LILTRC SEPAR+  ++   
Sbjct: 246 VTETTERL--------EDSRRESAASEEPKRSVLGSPRQCLILTRCNSEPARLVPEMGYR 293

The following BLAST results are available for this feature:

BLAST of Lsi01G013620 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi01G013620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BN59	6.9e-114	79.11	uncharacterized protein LOC103491651 OS=Cucumis melo OX=3656 GN=LOC103491651 PE=...	[more]
A0A5A7TVU1	8.8e-109	78.72	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0KK43	5.5e-103	75.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G439970 PE=4 SV=1	[more]
A0A6J1ECV0	5.9e-97	73.23	uncharacterized protein LOC111433021 OS=Cucurbita moschata OX=3662 GN=LOC1114330...	[more]
A0A6J1IHY6	4.2e-95	73.41	uncharacterized protein LOC111477626 OS=Cucurbita maxima OX=3661 GN=LOC111477626...	[more]

BLAST of Lsi01G013620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882779.1	1.7e-114	82.37	uncharacterized protein LOC120073931 [Benincasa hispida]	[more]
XP_008449922.1	1.4e-113	79.11	PREDICTED: uncharacterized protein LOC103491651 [Cucumis melo]	[more]
KAA0047280.1	1.8e-108	78.72	uncharacterized protein E6C27_scaffold908G00730 [Cucumis melo var. makuwa]	[more]
XP_011658465.2	1.1e-102	75.43	uncharacterized protein LOC105436016 [Cucumis sativus] >KGN48131.1 hypothetical ...	[more]
XP_023543942.1	1.0e-98	73.98	uncharacterized protein LOC111803666 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi01G013620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G03110.1	2.0e-25	33.67	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT2G37100.1	6.2e-22	35.20	protamine P1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..150
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..142
None	No IPR available	PANTHER	PTHR33448	CHLOROPLAST PROTEIN HCF243-RELATED	coord: 1..271
None	No IPR available	PANTHER	PTHR33448:SF10	PROTAMINE P1 FAMILY PROTEIN	coord: 1..271

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G013620.1	Lsi01G013620.1	mRNA