Lsi01G010960 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G010960
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	NADH-ubiquinone oxidoreductase chain 5
Location	chr01: 9007747 .. 9009963 (+)
RNA-Seq Expression	Lsi01G010960
Synteny	Lsi01G010960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCGTTTTAGGGCTCAATCTAAAAGCTCTCCAACGTGTTGCGGATCCTTCGGCCGTGAGAGGGTCTTTTGGCGGCCGTGTGAAGCTTAGCTTGCTTTAGCAGCCACGTGATGATTCGACGTTCGTGGTAGGCGTAGGAACTGGGCGAAGCGGTAGCGAAGCTCTGGTGGTGATGCAAGTGCGCGGTGAGCGTAGTAGCCCCCTCGGGCATGCTCTTTGTACAACCAAGCGAAGAGCTAGTAAGGGCCGGAATGGAATATCATATGTAGTGTAGAATCGGATCTGAGGCTCTTTACTAGGATTGGAACAAGCGAGGAACGAGTGACCACAAGCTCCGCTTAAGCGCTCGACATGCAGTTAGCTCAAAACATGTTCATCATGTGGCCGAGCGAAGCGCACCTGCACCTGTCTTTGTGAAGGGTGAAGGTGAAGCAACCTAGCATCACTTTAGATAGGAGCAGAATGGATGACTTACAACTGAAAGTCAGTTCTTTGGATCGATAGATATATCGTACCACGTAATGGAGATCAGATCTTGGTCTGGATCCGGTGGTTCGCTGAATTCGGGACCTAACGATGGTTGTTCGGTTCGTCACATAAACGGGAGCAGACGATTCCCTCGTCTCTCCCTTTTCGGGGAATGGCTGCAATCACAAGCAAGTGATTGAATGAGTGGGGGGCTCCGAAAGCACATGCGGGATAAGCAGGTGTTTCAGGAGACGGTCTAAAAAAGGGTCCGGTCTAGAAAGAAAAGAGAACTCTCAACACAATAGGAAGTCCCGGAATTTCTTGACAAAGTTCATGCGACGACGATCTATATGGAAGGGCAGTTTTGTTGATGCATTCTTGTTGAGAAAGTGTTTTTTTTCATTCTCCAACTCCGGATGAGTTTGAGGCCTCCGGCGCCTTTTTTTGAAGACTTTTTGTTGCGCCCCTATCTCTAAAGGGCGAGGGTGGCGGCCTTGATTGGGTGCCCCTCTAAGATCCCCGGTAAACTCGGGCTCGGGGGGGCCTTTGCCTTCATTTCTTGAAGAGCACGAGGTCACCTCTTCATCAATAGAAAGGAACGCCAGAAAAAACATTGTGAACTCCCCCCAAGAAAAAATAGCGGTAAGTGATGAGGGGGCGGCTTGATTGTGGTAGTCATTGCGAACTCATTCCATTTTTGGAGGATTCGTTCCCTGTTCCTGCGGCTGAGAAGCCTCAAGCTCCGCCCCCCTTACTCAACCTCTATAAAAAAAAGCCCTTTCCCCTTTCTCTAATAAGAAGGTCAGCTCCAGAACCGGCGGAATTGCCCAATCCTATCTTTCCAGGAAGTCAGTCCGGAGCGGGAGCAACTTCTAGAGCAAATTCTGACTAAACTCGATCACTTGGCGAGGGGGGTGTAGGAGGTCTTTTTGAGCGCATGTTTTTCATATCGATCAAGCGGGTTTCGTTTCATTTTCCGGAAAGCCTGTCATACTATTCCACTTTAGCTAAGCTAATGATGAAACAGGATCTGGATTTGTCTGCAGATGATGATGATGTCCACTCCTGGCTCGATGCACTTAACGAAAGGGAACTCTCACGATGAAGAAAGAATTTCCTTCGTAATTAAGCAGCATCCTTTAAGTAGGGGTGCGCCGGACCGCCGGCGAATAATAGGTACCCCCACCCCAGGCAGAGTTAGTGAGCCGTGTAATAGGCGACCATTTCGCGTGGTTCGGGGGGCACTTGAGTCAGCTGCTGGCGCCCGACTGTGTCTTGACCCCTATCCAATTTTTGGGCCAATTCCCCCTTCGTACTACCAAAAAATGAGATTCTTGCCGAATCCGAGTTTGCTGCTCCAACCATTACCAAACTAATACCTATTCTGTTTAGTACTTCAGGTGCTTCTGTTGCATATAATGTAAATCCCGTAGCGGATCAATTCCAACGAGCCTTTCAAACTAGTACTTTTTGTAATCGACTCTATAGCTTCTTCAATAAACGCTGGTTCTTCGATCAAGTTTTGAATGACTTTCTAGTCAGATCGTTCCTGCGTTTCGGATATGAAGTCTCATTCGAAGCTTTAGACAAAGGTGCTATTGAGATATTGGGCCCCTATGGTATCTCGTACACATTCCGACGATTGGCCGAGCGAATAAGTCAACTTCAAAGTGGATTTGTTGTGCGAAGAGTGCGTTATGACCCGTGGCCGCCTGCCTGGTGGGGGCGGCTCCTCCGTTGTGGGTAA

mRNA sequence

ATGGGCCCACGTGATGATTCGACGTTCGTGGTAGGCGTAGGAACTGGGCGAAGCGGTAGCGAAGCTCTGGTGGTGATGCAAGTGCGCGGTGAGCGTAGTAGCCCCCTCGGGCATGCTCTTTGTACAACCAAGCGAAGAGCTAGTAAGGGCCGGAATGGAATATCATATGATTGGAACAAGCGAGGAACGAGTGACCACAAGCTCCGCTTAAGCGCTCGACATGCAGTTAGCTCAAAACATGTTCATCATGTGGCCGAGCGAAGCGCACCTGCACCTGTCTTTGTGAAGGGTGAAGATATATCGTACCACGTAATGGAGATCAGATCTTGGTCTGGATCCGGTGGTTCGCTGAATTCGGGACCTAACGATGGTTGTTCGGTTCGTCACATAAACGGGAGCAGACGATTCCCTCGTCTCTCCCTTTTCGGGGAATGGCTGCAATCACAAGCAAGTCAGCTCCAGAACCGGCGGAATTGCCCAATCCTATCTTTCCAGGAAGTCAGTCCGGAGCGGGAGCAACTTCTAGAGCAAATTCTGACTAAACTCGATCACTTGGCGAGGGGGATGATGATGATGTCCACTCCTGGCTCGATGCACTTAACGAAAGGGAACTCTCACGATGAAGAAAGAATTTCCTTCGTAATTAAGCAGCATCCTTTAAGTAGGGGTGCGCCGGACCGCCGGCGAATAATAGGTACCCCCACCCCAGGCAGAGTTAGTGAGCCGTGTAATAGGCGACCATTTCGCGTGGTTCGGGGGGCACTTGAGTCAGCTGCTGGCGCCCGACTGTGTCTTGACCCCTATCCAATTTTTGGGCCAATTCCCCCTTCGTACTACCAAAAAATGAGATTCTTGCCGAATCCGAGTGCTTCTGTTGCATATAATGTAAATCCCGTAGCGGATCAATTCCAACGAGCCTTTCAAACTAGTACTTTTTGTAATCGACTCTATAGCTTCTTCAATAAACGCTGGTTCTTCGATCAAGTTTTGAATGACTTTCTAGTCAGATCGTTCCTGCGTTTCGGATATGAAGTCTCATTCGAAGCTTTAGACAAAGGTGCTATTGAGATATTGGGCCCCTATGGTATCTCGTACACATTCCGACGATTGGCCGAGCGAATAAGTCAACTTCAAAGTGGATTTGTTGTGCGAAGAGTGCGTTATGACCCGTGGCCGCCTGCCTGGTGGGGGCGGCTCCTCCGTTGTGGGTAA

Coding sequence (CDS)

ATGGGCCCACGTGATGATTCGACGTTCGTGGTAGGCGTAGGAACTGGGCGAAGCGGTAGCGAAGCTCTGGTGGTGATGCAAGTGCGCGGTGAGCGTAGTAGCCCCCTCGGGCATGCTCTTTGTACAACCAAGCGAAGAGCTAGTAAGGGCCGGAATGGAATATCATATGATTGGAACAAGCGAGGAACGAGTGACCACAAGCTCCGCTTAAGCGCTCGACATGCAGTTAGCTCAAAACATGTTCATCATGTGGCCGAGCGAAGCGCACCTGCACCTGTCTTTGTGAAGGGTGAAGATATATCGTACCACGTAATGGAGATCAGATCTTGGTCTGGATCCGGTGGTTCGCTGAATTCGGGACCTAACGATGGTTGTTCGGTTCGTCACATAAACGGGAGCAGACGATTCCCTCGTCTCTCCCTTTTCGGGGAATGGCTGCAATCACAAGCAAGTCAGCTCCAGAACCGGCGGAATTGCCCAATCCTATCTTTCCAGGAAGTCAGTCCGGAGCGGGAGCAACTTCTAGAGCAAATTCTGACTAAACTCGATCACTTGGCGAGGGGGATGATGATGATGTCCACTCCTGGCTCGATGCACTTAACGAAAGGGAACTCTCACGATGAAGAAAGAATTTCCTTCGTAATTAAGCAGCATCCTTTAAGTAGGGGTGCGCCGGACCGCCGGCGAATAATAGGTACCCCCACCCCAGGCAGAGTTAGTGAGCCGTGTAATAGGCGACCATTTCGCGTGGTTCGGGGGGCACTTGAGTCAGCTGCTGGCGCCCGACTGTGTCTTGACCCCTATCCAATTTTTGGGCCAATTCCCCCTTCGTACTACCAAAAAATGAGATTCTTGCCGAATCCGAGTGCTTCTGTTGCATATAATGTAAATCCCGTAGCGGATCAATTCCAACGAGCCTTTCAAACTAGTACTTTTTGTAATCGACTCTATAGCTTCTTCAATAAACGCTGGTTCTTCGATCAAGTTTTGAATGACTTTCTAGTCAGATCGTTCCTGCGTTTCGGATATGAAGTCTCATTCGAAGCTTTAGACAAAGGTGCTATTGAGATATTGGGCCCCTATGGTATCTCGTACACATTCCGACGATTGGCCGAGCGAATAAGTCAACTTCAAAGTGGATTTGTTGTGCGAAGAGTGCGTTATGACCCGTGGCCGCCTGCCTGGTGGGGGCGGCTCCTCCGTTGTGGGTAA

Protein sequence

MGPRDDSTFVVGVGTGRSGSEALVVMQVRGERSSPLGHALCTTKRRASKGRNGISYDWNKRGTSDHKLRLSARHAVSSKHVHHVAERSAPAPVFVKGEDISYHVMEIRSWSGSGGSLNSGPNDGCSVRHINGSRRFPRLSLFGEWLQSQASQLQNRRNCPILSFQEVSPEREQLLEQILTKLDHLARGMMMMSTPGSMHLTKGNSHDEERISFVIKQHPLSRGAPDRRRIIGTPTPGRVSEPCNRRPFRVVRGALESAAGARLCLDPYPIFGPIPPSYYQKMRFLPNPSASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEALDKGAIEILGPYGISYTFRRLAERISQLQSGFVVRRVRYDPWPPAWWGRLLRCG

Homology

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BLAST of Lsi01G010960 vs. ExPASy Swiss-Prot
Match: P29388 (NADH-ubiquinone oxidoreductase chain 5 OS=Arabidopsis thaliana OX=3702 GN=ND5 PE=1 SV=3)

HSP 1 Score: 188.0 bits (476), Expect = 2.1e-46
Identity = 92/93 (98.92%), Postives = 92/93 (98.92%), Query Frame = 0


Query: 290 ASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEA 349
           A VAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEA
Sbjct: 529 AFVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEA 588

Query: 350 LDKGAIEILGPYGISYTFRRLAERISQLQSGFV 383
           LDKGAIEILGPYGISYTFRRLAERISQLQSGFV
Sbjct: 589 LDKGAIEILGPYGISYTFRRLAERISQLQSGFV 621

[Close]

BLAST of Lsi01G010960 vs. ExPASy Swiss-Prot
Match: P10330 (NADH-ubiquinone oxidoreductase chain 5 OS=Oenothera berteroana OX=3950 GN=ND5 PE=2 SV=2)

HSP 1 Score: 183.0 bits (463), Expect = 6.9e-45
Identity = 90/93 (96.77%), Postives = 91/93 (97.85%), Query Frame = 0


Query: 290 ASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEA 349
           A +AYNVN VADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEA
Sbjct: 529 AFLAYNVNLVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEA 588

Query: 350 LDKGAIEILGPYGISYTFRRLAERISQLQSGFV 383
           LDKGAIEILGPYGISYTFRRLAERISQLQSGFV
Sbjct: 589 LDKGAIEILGPYGISYTFRRLAERISQLQSGFV 621

[Close]

BLAST of Lsi01G010960 vs. ExPASy Swiss-Prot
Match: Q36284 (NADH-ubiquinone oxidoreductase chain 5 (Fragment) OS=Zea mays OX=4577 GN=ND5 PE=3 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 4.5e-44
Identity = 89/93 (95.70%), Postives = 90/93 (96.77%), Query Frame = 0


Query: 290 ASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEA 349
           AS+AYNVN VADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGY VSFEA
Sbjct: 39  ASLAYNVNLVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYSVSFEA 98

Query: 350 LDKGAIEILGPYGISYTFRRLAERISQLQSGFV 383
           LDKGAIEILGPYGISYTFRRLAERISQLQSG V
Sbjct: 99  LDKGAIEILGPYGISYTFRRLAERISQLQSGSV 131

[Close]

BLAST of Lsi01G010960 vs. ExPASy Swiss-Prot
Match: Q37680 (NADH-ubiquinone oxidoreductase chain 5 OS=Triticum aestivum OX=4565 GN=ND5 PE=3 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 4.5e-44
Identity = 89/93 (95.70%), Postives = 90/93 (96.77%), Query Frame = 0


Query: 290 ASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEA 349
           AS+AYNVN VADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGY VSFEA
Sbjct: 529 ASLAYNVNLVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYSVSFEA 588

Query: 350 LDKGAIEILGPYGISYTFRRLAERISQLQSGFV 383
           LDKGAIEILGPYGISYTFRRLAERISQLQSG V
Sbjct: 589 LDKGAIEILGPYGISYTFRRLAERISQLQSGSV 621

[Close]

BLAST of Lsi01G010960 vs. ExPASy Swiss-Prot
Match: P26849 (NADH-ubiquinone oxidoreductase chain 5 OS=Marchantia polymorpha OX=3197 GN=ND5 PE=3 SV=2)

HSP 1 Score: 141.0 bits (354), Expect = 3.0e-32
Identity = 68/91 (74.73%), Postives = 79/91 (86.81%), Query Frame = 0


Query: 292 VAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEALD 351
           VAY+VN V +    A +TSTF NRLY FFNKRWFFD+V NDFL RSFLRFGYEVSF+ALD
Sbjct: 534 VAYSVNFVVNPLIFALKTSTFGNRLYCFFNKRWFFDKVFNDFLARSFLRFGYEVSFKALD 593

Query: 352 KGAIEILGPYGISYTFRRLAERISQLQSGFV 383
           KGAIEILGPYGISYT R++A++IS++QSGFV
Sbjct: 594 KGAIEILGPYGISYTIRKMAQQISKIQSGFV 624

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BLAST of Lsi01G010960 vs. ExPASy TrEMBL
Match: A0A371IGW3 (NADH-ubiquinone oxidoreductase chain 5 (Fragment) OS=Mucuna pruriens OX=157652 GN=ND5 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 1.4e-88
Identity = 161/166 (96.99%), Postives = 162/166 (97.59%), Query Frame = 0


Query: 238 RVSEPCNRRPFRVVRGALESAAGARLCLDPYPIFGPIPPSYYQKMRFLPNPSASVAYNVN 297
           RVSEPCNRRPFR VRGALESAAGARL LDPYPIFGPIPPSYYQKMRFLPNPSASVAYNVN
Sbjct: 121 RVSEPCNRRPFRAVRGALESAAGARLRLDPYPIFGPIPPSYYQKMRFLPNPSASVAYNVN 180

Query: 298 PVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEALDKGAIEI 357
           PVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEALDKGAIEI
Sbjct: 181 PVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEALDKGAIEI 240

Query: 358 LGPYGISYTFRRLAERISQLQSGFVVRRVRYDPWPPAWWGRLLRCG 404
           LGPYGISYTFRRLAERISQLQSGFVVRRVRYDPWPPAW G +LRCG
Sbjct: 241 LGPYGISYTFRRLAERISQLQSGFVVRRVRYDPWPPAWSGGVLRCG 286

[Close]

BLAST of Lsi01G010960 vs. ExPASy TrEMBL
Match: A0A444YPY6 (NADH-ubiquinone oxidoreductase chain 5 OS=Arachis hypogaea OX=3818 GN=Ahy_B06g083543 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 3.0e-83
Identity = 156/167 (93.41%), Postives = 157/167 (94.01%), Query Frame = 0


Query: 235 TPGRVSEPCNRRPFRVVRGALESAAGAR-LC---LDPYPIFGPIPPSYYQKMRFLPNPSA 294
           TPG+VSEPCNRRPFR VRG LESAAG R  C   LDPYPIFG IPPSYYQKMRFLPNPSA
Sbjct: 112 TPGKVSEPCNRRPFRAVRGTLESAAGTRGYCTNGLDPYPIFGQIPPSYYQKMRFLPNPSA 171

Query: 295 SVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEAL 354
           SVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEAL
Sbjct: 172 SVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEAL 231

Query: 355 DKGAIEILGPYGISYTFRRLAERISQLQSGFVVRRVRYDPWPPAWWG 398
           DKGAIEILGPYGISYTFRRLAERISQLQSGFVVRRVRYDPWPPAW G
Sbjct: 232 DKGAIEILGPYGISYTFRRLAERISQLQSGFVVRRVRYDPWPPAWSG 278

[Close]

BLAST of Lsi01G010960 vs. ExPASy TrEMBL
Match: A0A5H2Y4G3 (NADH-ubiquinone oxidoreductase chain 5 (Fragment) OS=Prunus dulcis OX=3755 GN=Prudu_263S000800 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 4.0e-80
Identity = 153/163 (93.87%), Postives = 153/163 (93.87%), Query Frame = 0


Query: 223 GAPDRRRIIGTPTPGRVSEPCNRRPFRVVRGALESAAGARLCLDPYPIFGPIPPSYYQKM 282
           G P   R    PTPGRVSEPCNRRPFR VRGALESAAGARL LDPYPIFGPIPPSYYQKM
Sbjct: 4   GPPTNNRY---PTPGRVSEPCNRRPFRAVRGALESAAGARLRLDPYPIFGPIPPSYYQKM 63

Query: 283 RFLPNPSASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFG 342
           RFLPNPSASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFG
Sbjct: 64  RFLPNPSASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFG 123

Query: 343 YEVSFEALDKGAIEILGPYGISYTFRRLAERISQLQSGFVVRR 386
           YEVSFEALDKGAIEILGPYGISYTFRRLAERISQLQSGFVVRR
Sbjct: 124 YEVSFEALDKGAIEILGPYGISYTFRRLAERISQLQSGFVVRR 163

[Close]

BLAST of Lsi01G010960 vs. ExPASy TrEMBL
Match: A0A2P6P161 (NADH-ubiquinone oxidoreductase chain 5 OS=Rosa chinensis OX=74649 GN=RchiOBHm_MTg0499151 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 4.0e-64
Identity = 121/122 (99.18%), Postives = 121/122 (99.18%), Query Frame = 0


Query: 282 MRFLPNPSASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRF 341
           MRFLPNPSASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRF
Sbjct: 1   MRFLPNPSASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRF 60

Query: 342 GYEVSFEALDKGAIEILGPYGISYTFRRLAERISQLQSGFVVRRVRYDPWPPAWWGRLLR 401
           GYEVSFEALDKGAIEILGPYGISYTFRRLAERISQLQSGFVVRRVRYD WPPAWWGRLLR
Sbjct: 61  GYEVSFEALDKGAIEILGPYGISYTFRRLAERISQLQSGFVVRRVRYDLWPPAWWGRLLR 120

Query: 402 CG 404
           CG
Sbjct: 121 CG 122

[Close]

BLAST of Lsi01G010960 vs. ExPASy TrEMBL
Match: A0A2H5QSM6 (NADH-ubiquinone oxidoreductase chain 5 OS=Citrus unshiu OX=55188 GN=CUMW_257990 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 1.6e-60
Identity = 115/120 (95.83%), Postives = 117/120 (97.50%), Query Frame = 0


Query: 284 FLPNPSASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGY 343
           FL   SASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGY
Sbjct: 60  FLTLTSASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGY 119

Query: 344 EVSFEALDKGAIEILGPYGISYTFRRLAERISQLQSGFVVRRVRYDPWPPAWWGRLLRCG 403
           E+SFEALDKGAIEILGPYGISYTFRRLAERIS+LQSGFVVRRVRYDPWPPAWWGRLLRCG
Sbjct: 120 EISFEALDKGAIEILGPYGISYTFRRLAERISKLQSGFVVRRVRYDPWPPAWWGRLLRCG 179

[Close]

BLAST of Lsi01G010960 vs. NCBI nr
Match: RDY14260.1 (NADH-ubiquinone oxidoreductase chain 5, partial [Mucuna pruriens])

HSP 1 Score: 336.7 bits (862), Expect = 2.9e-88
Identity = 161/166 (96.99%), Postives = 162/166 (97.59%), Query Frame = 0


Query: 238 RVSEPCNRRPFRVVRGALESAAGARLCLDPYPIFGPIPPSYYQKMRFLPNPSASVAYNVN 297
           RVSEPCNRRPFR VRGALESAAGARL LDPYPIFGPIPPSYYQKMRFLPNPSASVAYNVN
Sbjct: 121 RVSEPCNRRPFRAVRGALESAAGARLRLDPYPIFGPIPPSYYQKMRFLPNPSASVAYNVN 180

Query: 298 PVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEALDKGAIEI 357
           PVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEALDKGAIEI
Sbjct: 181 PVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEALDKGAIEI 240

Query: 358 LGPYGISYTFRRLAERISQLQSGFVVRRVRYDPWPPAWWGRLLRCG 404
           LGPYGISYTFRRLAERISQLQSGFVVRRVRYDPWPPAW G +LRCG
Sbjct: 241 LGPYGISYTFRRLAERISQLQSGFVVRRVRYDPWPPAWSGGVLRCG 286

[Close]

BLAST of Lsi01G010960 vs. NCBI nr
Match: RYR04026.1 (hypothetical protein Ahy_B06g083543 [Arachis hypogaea])

HSP 1 Score: 318.9 bits (816), Expect = 6.2e-83
Identity = 156/167 (93.41%), Postives = 157/167 (94.01%), Query Frame = 0


Query: 235 TPGRVSEPCNRRPFRVVRGALESAAGAR-LC---LDPYPIFGPIPPSYYQKMRFLPNPSA 294
           TPG+VSEPCNRRPFR VRG LESAAG R  C   LDPYPIFG IPPSYYQKMRFLPNPSA
Sbjct: 112 TPGKVSEPCNRRPFRAVRGTLESAAGTRGYCTNGLDPYPIFGQIPPSYYQKMRFLPNPSA 171

Query: 295 SVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEAL 354
           SVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEAL
Sbjct: 172 SVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEAL 231

Query: 355 DKGAIEILGPYGISYTFRRLAERISQLQSGFVVRRVRYDPWPPAWWG 398
           DKGAIEILGPYGISYTFRRLAERISQLQSGFVVRRVRYDPWPPAW G
Sbjct: 232 DKGAIEILGPYGISYTFRRLAERISQLQSGFVVRRVRYDPWPPAWSG 278

[Close]

BLAST of Lsi01G010960 vs. NCBI nr
Match: BBN68050.1 (hypothetical protein Prudu_263S000800, partial [Prunus dulcis])

HSP 1 Score: 308.5 bits (789), Expect = 8.3e-80
Identity = 153/163 (93.87%), Postives = 153/163 (93.87%), Query Frame = 0


Query: 223 GAPDRRRIIGTPTPGRVSEPCNRRPFRVVRGALESAAGARLCLDPYPIFGPIPPSYYQKM 282
           G P   R    PTPGRVSEPCNRRPFR VRGALESAAGARL LDPYPIFGPIPPSYYQKM
Sbjct: 4   GPPTNNRY---PTPGRVSEPCNRRPFRAVRGALESAAGARLRLDPYPIFGPIPPSYYQKM 63

Query: 283 RFLPNPSASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFG 342
           RFLPNPSASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFG
Sbjct: 64  RFLPNPSASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFG 123

Query: 343 YEVSFEALDKGAIEILGPYGISYTFRRLAERISQLQSGFVVRR 386
           YEVSFEALDKGAIEILGPYGISYTFRRLAERISQLQSGFVVRR
Sbjct: 124 YEVSFEALDKGAIEILGPYGISYTFRRLAERISQLQSGFVVRR 163

[Close]

BLAST of Lsi01G010960 vs. NCBI nr
Match: KAF5753194.1 (putative NADH dehydrogenase subunit 5 [Helianthus annuus])

HSP 1 Score: 257.7 bits (657), Expect = 1.7e-64
Identity = 121/122 (99.18%), Postives = 121/122 (99.18%), Query Frame = 0


Query: 282 MRFLPNPSASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRF 341
           MRFLPNPSASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQV NDFLVRSFLRF
Sbjct: 1   MRFLPNPSASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVFNDFLVRSFLRF 60

Query: 342 GYEVSFEALDKGAIEILGPYGISYTFRRLAERISQLQSGFVVRRVRYDPWPPAWWGRLLR 401
           GYEVSFEALDKGAIEILGPYGISYTFRRLAERISQLQSGFVVRRVRYDPWPPAWWGRLLR
Sbjct: 61  GYEVSFEALDKGAIEILGPYGISYTFRRLAERISQLQSGFVVRRVRYDPWPPAWWGRLLR 120

Query: 402 CG 404
           CG
Sbjct: 121 CG 122

[Close]

BLAST of Lsi01G010960 vs. NCBI nr
Match: PRQ15661.1 (putative NADH:ubiquinone reductase (H(+)-translocating) [Rosa chinensis])

HSP 1 Score: 255.4 bits (651), Expect = 8.4e-64
Identity = 121/122 (99.18%), Postives = 121/122 (99.18%), Query Frame = 0


Query: 282 MRFLPNPSASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRF 341
           MRFLPNPSASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRF
Sbjct: 1   MRFLPNPSASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRF 60

Query: 342 GYEVSFEALDKGAIEILGPYGISYTFRRLAERISQLQSGFVVRRVRYDPWPPAWWGRLLR 401
           GYEVSFEALDKGAIEILGPYGISYTFRRLAERISQLQSGFVVRRVRYD WPPAWWGRLLR
Sbjct: 61  GYEVSFEALDKGAIEILGPYGISYTFRRLAERISQLQSGFVVRRVRYDLWPPAWWGRLLR 120

Query: 402 CG 404
           CG
Sbjct: 121 CG 122

[Close]

BLAST of Lsi01G010960 vs. TAIR 10
Match: ATMG00060.1 (NADH dehydrogenase subunit 5C )

HSP 1 Score: 188.0 bits (476), Expect = 1.5e-47
Identity = 92/93 (98.92%), Postives = 92/93 (98.92%), Query Frame = 0


Query: 290 ASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEA 349
           A VAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEA
Sbjct: 529 AFVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEA 588

Query: 350 LDKGAIEILGPYGISYTFRRLAERISQLQSGFV 383
           LDKGAIEILGPYGISYTFRRLAERISQLQSGFV
Sbjct: 589 LDKGAIEILGPYGISYTFRRLAERISQLQSGFV 621

[Close]

BLAST of Lsi01G010960 vs. TAIR 10
Match: ATMG00513.1 (NADH dehydrogenase 5A )

HSP 1 Score: 188.0 bits (476), Expect = 1.5e-47
Identity = 92/93 (98.92%), Postives = 92/93 (98.92%), Query Frame = 0


Query: 290 ASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEA 349
           A VAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEA
Sbjct: 529 AFVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEA 588

Query: 350 LDKGAIEILGPYGISYTFRRLAERISQLQSGFV 383
           LDKGAIEILGPYGISYTFRRLAERISQLQSGFV
Sbjct: 589 LDKGAIEILGPYGISYTFRRLAERISQLQSGFV 621

[Close]

BLAST of Lsi01G010960 vs. TAIR 10
Match: ATMG00665.1 (NADH dehydrogenase 5B )

HSP 1 Score: 188.0 bits (476), Expect = 1.5e-47
Identity = 92/93 (98.92%), Postives = 92/93 (98.92%), Query Frame = 0


Query: 290 ASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEA 349
           A VAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEA
Sbjct: 529 AFVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEA 588

Query: 350 LDKGAIEILGPYGISYTFRRLAERISQLQSGFV 383
           LDKGAIEILGPYGISYTFRRLAERISQLQSGFV
Sbjct: 589 LDKGAIEILGPYGISYTFRRLAERISQLQSGFV 621

The following BLAST results are available for this feature:

BLAST of Lsi01G010960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29388	2.1e-46	98.92	NADH-ubiquinone oxidoreductase chain 5 OS=Arabidopsis thaliana OX=3702 GN=ND5 PE...	[more]
P10330	6.9e-45	96.77	NADH-ubiquinone oxidoreductase chain 5 OS=Oenothera berteroana OX=3950 GN=ND5 PE...	[more]
Q36284	4.5e-44	95.70	NADH-ubiquinone oxidoreductase chain 5 (Fragment) OS=Zea mays OX=4577 GN=ND5 PE=...	[more]
Q37680	4.5e-44	95.70	NADH-ubiquinone oxidoreductase chain 5 OS=Triticum aestivum OX=4565 GN=ND5 PE=3 ...	[more]
P26849	3.0e-32	74.73	NADH-ubiquinone oxidoreductase chain 5 OS=Marchantia polymorpha OX=3197 GN=ND5 P...	[more]

BLAST of Lsi01G010960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A371IGW3	1.4e-88	96.99	NADH-ubiquinone oxidoreductase chain 5 (Fragment) OS=Mucuna pruriens OX=157652 G...	[more]
A0A444YPY6	3.0e-83	93.41	NADH-ubiquinone oxidoreductase chain 5 OS=Arachis hypogaea OX=3818 GN=Ahy_B06g08...	[more]
A0A5H2Y4G3	4.0e-80	93.87	NADH-ubiquinone oxidoreductase chain 5 (Fragment) OS=Prunus dulcis OX=3755 GN=Pr...	[more]
A0A2P6P161	4.0e-64	99.18	NADH-ubiquinone oxidoreductase chain 5 OS=Rosa chinensis OX=74649 GN=RchiOBHm_MT...	[more]
A0A2H5QSM6	1.6e-60	95.83	NADH-ubiquinone oxidoreductase chain 5 OS=Citrus unshiu OX=55188 GN=CUMW_257990 ...	[more]

BLAST of Lsi01G010960 vs. NCBI nr


Match Name	E-value	Identity	Description
RDY14260.1	2.9e-88	96.99	NADH-ubiquinone oxidoreductase chain 5, partial [Mucuna pruriens]	[more]
RYR04026.1	6.2e-83	93.41	hypothetical protein Ahy_B06g083543 [Arachis hypogaea]	[more]
BBN68050.1	8.3e-80	93.87	hypothetical protein Prudu_263S000800, partial [Prunus dulcis]	[more]
KAF5753194.1	1.7e-64	99.18	putative NADH dehydrogenase subunit 5 [Helianthus annuus]	[more]
PRQ15661.1	8.4e-64	99.18	putative NADH:ubiquinone reductase (H(+)-translocating) [Rosa chinensis]	[more]

BLAST of Lsi01G010960 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00060.1	1.5e-47	98.92	NADH dehydrogenase subunit 5C	[more]
ATMG00513.1	1.5e-47	98.92	NADH dehydrogenase 5A	[more]
ATMG00665.1	1.5e-47	98.92	NADH dehydrogenase 5B	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010934	NADH dehydrogenase subunit 5, C-terminal	PFAM	PF06455	NADH5_C	coord: 312..381 e-value: 5.6E-7 score: 29.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G010960.1	Lsi01G010960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042773	ATP synthesis coupled electron transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005743	mitochondrial inner membrane
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity