Lsi01G010260 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G010260
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Mitochondrial pyruvate carrier
Location	chr01: 8472677 .. 8473821 (+)
RNA-Seq Expression	Lsi01G010260
Synteny	Lsi01G010260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCATTCCGAGCATTCTTGAACAGCCCTGTTGGTCCAAAAACTACTCATTTTTGGGGACCTGTCGCCAACTGGGGATTTGTGGCTGCTGTATGTTTCACTTCAATTTAAGTATCAGTTCTATCATGCTTACCATGTTGCCTATCACTTGATTGTTATTCTTAGTTCTTTTCTGCTATTGTCTTGATCCTGCTGGTGGATTCAAAACAGGGGTTAGCAGACATGAACAAGCCACCAGAAATGATTTCTGGCAACATGACAGCAGGTTGAACCTATCTATGTTAGAACTCATTTTATCTATAGTGTCTTTTAGTTTGGTCTCAGTAGTAATATCTGCCCTTGTCATTGCAGCAATGTGCGTCTATTCAGCACTGTTCATGAGATTTGCATGGATGGTGCAACCCCGCAATTACCTACTTCTTGCTTGTCATGCATCGAATGAGACTGTACAGTTGTATCAATTCTCACGTTGGGCAAGGTCTCAAGGGTAAGTAACAAACTAATCAACTTCATTGAACCTTATGATTGTTTCATGGCTTGGTTGTTGACAAGACTGTACAGTTGTATCATGTTTTCCGACAAGAACTTATAAAAAAAATTTGTTTTATGTCACACTGAAAGTCCATTTGTTTTATGCCACACTGTGTATGTGCATGTAAATTACGGCTGTGATAGTTTTTTCGTTTCTTTTGGGCAAAGTAATAAGTATTAAGCCTTTTTTTTGACATAAGCTACATTCCAATAGGTACTTGTCAGAGAAGAAAGACGAAGCTGCATCTCAGTAGCTTGATGCTATATTCTCCATCCTTTTGTCTTTATGTCATTATTTTCTACGGGTTGTAATTTGACTCATTGATAATCGTTGTGTATGTTATTTGAAAATATGTCGAGGAAACTACTTCAGTAACACCAAAATGGAATTGGGAATTTTTCTCCCGAGAAGCAATAAATATTTCAGATTTGCCAATTCTGAGATAAATGGTTGGTGGGACTACTAAATAAATATTTACTTAGGAAGGCATTTATTTCTGCTCTTTTAGACGGACGTAGTCATTTGGGTATTGAGTTGAATTGTGAAGTCATGTTAAAGTTAGGAATTTTGCGTTTGGGATGTTGGGTTGTAAGATGAAATTCAATAACAG

mRNA sequence

ATGGCTTCATTCCGAGCATTCTTGAACAGCCCTGTTGGTCCAAAAACTACTCATTTTTGGGGACCTGTCGCCAACTGGGGATTTGTGGCTGCTGGGTTAGCAGACATGAACAAGCCACCAGAAATGATTTCTGGCAACATGACAGCAGTGTCTTTTAGTTTGGTCTCAGTAGTAATATCTGCCCTTGTCATTGCAGCAATGTGCGTCTATTCAGCACTGTTCATGAGATTTGCATGGATGGTGCAACCCCGCAATTACCTACTTCTTGCTTGTCATGCATCGAATGAGACTGTACAGTTGTATCAATTCTCACGTTGGGCAAGGTCTCAAGGGTACTTGTCAGAGAAGAAAGACGAAGCTGCATCTCAGTAGCTTGATGCTATATTCTCCATCCTTTTGTCTTTATGTCATTATTTTCTACGGGTTGTAATTTGACTCATTGATAATCGTTGTGTATGTTATTTGAAAATATGTCGAGGAAACTACTTCAGTAACACCAAAATGGAATTGGGAATTTTTCTCCCGAGAAGCAATAAATATTTCAGATTTGCCAATTCTGAGATAAATGGTTGGTGGGACTACTAAATAAATATTTACTTAGGAAGGCATTTATTTCTGCTCTTTTAGACGGACGTAGTCATTTGGGTATTGAGTTGAATTGTGAAGTCATGTTAAAGTTAGGAATTTTGCGTTTGGGATGTTGGGTTGTAAGATGAAATTCAATAACAG

Coding sequence (CDS)

ATGGCTTCATTCCGAGCATTCTTGAACAGCCCTGTTGGTCCAAAAACTACTCATTTTTGGGGACCTGTCGCCAACTGGGGATTTGTGGCTGCTGGGTTAGCAGACATGAACAAGCCACCAGAAATGATTTCTGGCAACATGACAGCAGTGTCTTTTAGTTTGGTCTCAGTAGTAATATCTGCCCTTGTCATTGCAGCAATGTGCGTCTATTCAGCACTGTTCATGAGATTTGCATGGATGGTGCAACCCCGCAATTACCTACTTCTTGCTTGTCATGCATCGAATGAGACTGTACAGTTGTATCAATTCTCACGTTGGGCAAGGTCTCAAGGGTACTTGTCAGAGAAGAAAGACGAAGCTGCATCTCAGTAG

Protein sequence

MASFRAFLNSPVGPKTTHFWGPVANWGFVAAGLADMNKPPEMISGNMTAVSFSLVSVVISALVIAAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWARSQGYLSEKKDEAASQ

Homology

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BLAST of Lsi01G010260 vs. ExPASy Swiss-Prot
Match: Q949R9 (Mitochondrial pyruvate carrier 1 OS=Arabidopsis thaliana OX=3702 GN=MPC1 PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 1.9e-46
Identity = 89/116 (76.72%), Postives = 96/116 (82.76%), Query Frame = 0


Query: 4   FRAFLNSPVGPKTTHFWGPVANWGFVAAGLADMNKPPEMISGNMTAVSFSLVSVVISALV 63
           F+AFLNSP+GPKTTHFWGP+ANWGFVAAGL DM KPPEMISGNM+               
Sbjct: 6   FQAFLNSPIGPKTTHFWGPIANWGFVAAGLVDMQKPPEMISGNMS--------------- 65

Query: 64  IAAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWARSQGYLSEKKDE 120
            +AMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQ SRWAR+QGYLS KK+E
Sbjct: 66  -SAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQLSRWARAQGYLSSKKEE 105

[Close]

BLAST of Lsi01G010260 vs. ExPASy Swiss-Prot
Match: Q3ZCG2 (Mitochondrial pyruvate carrier 1 OS=Bos taurus OX=9913 GN=MPC1 PE=1 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 5.8e-19
Identity = 49/95 (51.58%), Postives = 57/95 (60.00%), Query Frame = 0


Query: 16  TTHFWGPVANWGFVAAGLADMNKPPEMISGNMTAVSFSLVSVVISALVIAAMCVYSALFM 75
           +THFWGPVANWG   A + DM K PE+ISG MT                 A+C YS  FM
Sbjct: 24  STHFWGPVANWGLPIAAINDMKKSPEIISGRMT----------------FALCCYSLTFM 83

Query: 76  RFAWMVQPRNYLLLACHASNETVQLYQFSRWARSQ 111
           RFA+ VQPRN+LL ACHA+NE  QL Q  R  R +
Sbjct: 84  RFAYKVQPRNWLLFACHATNEVAQLIQGGRLIRHE 102

[Close]

BLAST of Lsi01G010260 vs. ExPASy Swiss-Prot
Match: Q9Y5U8 (Mitochondrial pyruvate carrier 1 OS=Homo sapiens OX=9606 GN=MPC1 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 9.9e-19
Identity = 48/90 (53.33%), Postives = 55/90 (61.11%), Query Frame = 0


Query: 16  TTHFWGPVANWGFVAAGLADMNKPPEMISGNMTAVSFSLVSVVISALVIAAMCVYSALFM 75
           +THFWGPVANWG   A + DM K PE+ISG MT                 A+C YS  FM
Sbjct: 24  STHFWGPVANWGLPIAAINDMKKSPEIISGRMT----------------FALCCYSLTFM 83

Query: 76  RFAWMVQPRNYLLLACHASNETVQLYQFSR 106
           RFA+ VQPRN+LL ACHA+NE  QL Q  R
Sbjct: 84  RFAYKVQPRNWLLFACHATNEVAQLIQGGR 97

[Close]

BLAST of Lsi01G010260 vs. ExPASy Swiss-Prot
Match: P63030 (Mitochondrial pyruvate carrier 1 OS=Mus musculus OX=10090 GN=Mpc1 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 2.9e-18
Identity = 47/90 (52.22%), Postives = 54/90 (60.00%), Query Frame = 0


Query: 16  TTHFWGPVANWGFVAAGLADMNKPPEMISGNMTAVSFSLVSVVISALVIAAMCVYSALFM 75
           +THFWGPVANWG   A + DM K PE+ISG MT                 A+C YS  FM
Sbjct: 24  STHFWGPVANWGLPIAAINDMKKSPEIISGRMT----------------FALCCYSLTFM 83

Query: 76  RFAWMVQPRNYLLLACHASNETVQLYQFSR 106
           RFA+ VQPRN+LL ACH +NE  QL Q  R
Sbjct: 84  RFAYKVQPRNWLLFACHVTNEVAQLIQGGR 97

[Close]

BLAST of Lsi01G010260 vs. ExPASy Swiss-Prot
Match: P63031 (Mitochondrial pyruvate carrier 1 OS=Rattus norvegicus OX=10116 GN=Mpc1 PE=3 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 2.9e-18
Identity = 47/90 (52.22%), Postives = 54/90 (60.00%), Query Frame = 0


Query: 16  TTHFWGPVANWGFVAAGLADMNKPPEMISGNMTAVSFSLVSVVISALVIAAMCVYSALFM 75
           +THFWGPVANWG   A + DM K PE+ISG MT                 A+C YS  FM
Sbjct: 24  STHFWGPVANWGLPIAAINDMKKSPEIISGRMT----------------FALCCYSLTFM 83

Query: 76  RFAWMVQPRNYLLLACHASNETVQLYQFSR 106
           RFA+ VQPRN+LL ACH +NE  QL Q  R
Sbjct: 84  RFAYKVQPRNWLLFACHVTNEVAQLIQGGR 97

[Close]

BLAST of Lsi01G010260 vs. ExPASy TrEMBL
Match: A0A6J1GFX0 (Mitochondrial pyruvate carrier OS=Cucurbita moschata OX=3662 GN=LOC111453819 PE=3 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 2.0e-51
Identity = 105/123 (85.37%), Postives = 107/123 (86.99%), Query Frame = 0


Query: 1   MASFRAFLNSPVGPKTTHFWGPVANWGFVAAGLADMNKPPEMISGNMTAVSFSLVSVVIS 60
           MASFRAFLNSPVGPKTTHFWGPVANWGFVAAGLADMNKPPEMISGNMT            
Sbjct: 1   MASFRAFLNSPVGPKTTHFWGPVANWGFVAAGLADMNKPPEMISGNMT------------ 60

Query: 61  ALVIAAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWARSQGYLSEKKDEA 120
               AAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQ+YQFSRWA+SQGYLSEKKDEA
Sbjct: 61  ----AAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQMYQFSRWAKSQGYLSEKKDEA 107

Query: 121 ASQ 124
           ASQ
Sbjct: 121 ASQ 107

[Close]

BLAST of Lsi01G010260 vs. ExPASy TrEMBL
Match: A0A6J1IJJ0 (Mitochondrial pyruvate carrier OS=Cucurbita maxima OX=3661 GN=LOC111478010 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 5.9e-51
Identity = 104/123 (84.55%), Postives = 106/123 (86.18%), Query Frame = 0


Query: 1   MASFRAFLNSPVGPKTTHFWGPVANWGFVAAGLADMNKPPEMISGNMTAVSFSLVSVVIS 60
           M SFRAFLNSPVGPKTTHFWGPVANWGFVAAGLADMNKPPEMISGNMT            
Sbjct: 1   MVSFRAFLNSPVGPKTTHFWGPVANWGFVAAGLADMNKPPEMISGNMT------------ 60

Query: 61  ALVIAAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWARSQGYLSEKKDEA 120
               AAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQ+YQFSRWA+SQGYLSEKKDEA
Sbjct: 61  ----AAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQMYQFSRWAKSQGYLSEKKDEA 107

Query: 121 ASQ 124
           ASQ
Sbjct: 121 ASQ 107

[Close]

BLAST of Lsi01G010260 vs. ExPASy TrEMBL
Match: A0A0A0KI44 (Mitochondrial pyruvate carrier OS=Cucumis sativus OX=3659 GN=Csa_6G489900 PE=3 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 7.8e-51
Identity = 104/123 (84.55%), Postives = 106/123 (86.18%), Query Frame = 0


Query: 1   MASFRAFLNSPVGPKTTHFWGPVANWGFVAAGLADMNKPPEMISGNMTAVSFSLVSVVIS 60
           MASFRAFLNSPVGPKTTHFWGPVANWGFVAAGLADMNKPPEMISGNMT            
Sbjct: 1   MASFRAFLNSPVGPKTTHFWGPVANWGFVAAGLADMNKPPEMISGNMT------------ 60

Query: 61  ALVIAAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWARSQGYLSEKKDEA 120
               AAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWA++QGYLSEKKDEA
Sbjct: 61  ----AAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWAKAQGYLSEKKDEA 107

Query: 121 ASQ 124
            SQ
Sbjct: 121 GSQ 107

[Close]

BLAST of Lsi01G010260 vs. ExPASy TrEMBL
Match: A0A6J1BVP7 (Mitochondrial pyruvate carrier OS=Momordica charantia OX=3673 GN=LOC111005937 PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.3e-50
Identity = 102/123 (82.93%), Postives = 106/123 (86.18%), Query Frame = 0


Query: 1   MASFRAFLNSPVGPKTTHFWGPVANWGFVAAGLADMNKPPEMISGNMTAVSFSLVSVVIS 60
           MASFRAFLNSPVGPKTTHFWGP+ANWGFVAAGLADMNKPPEMISGNMT            
Sbjct: 1   MASFRAFLNSPVGPKTTHFWGPIANWGFVAAGLADMNKPPEMISGNMT------------ 60

Query: 61  ALVIAAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWARSQGYLSEKKDEA 120
               AAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWA++QGYLSEKKDEA
Sbjct: 61  ----AAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWAKAQGYLSEKKDEA 107

Query: 121 ASQ 124
            +Q
Sbjct: 121 GAQ 107

[Close]

BLAST of Lsi01G010260 vs. ExPASy TrEMBL
Match: A0A1S4DT60 (Mitochondrial pyruvate carrier OS=Cucumis melo OX=3656 GN=LOC103484731 PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.3e-50
Identity = 103/123 (83.74%), Postives = 105/123 (85.37%), Query Frame = 0


Query: 1   MASFRAFLNSPVGPKTTHFWGPVANWGFVAAGLADMNKPPEMISGNMTAVSFSLVSVVIS 60
           M SFRAFLNSPVGPKTTHFWGPVANWGFVAAGLADMNKPPEMISGNMT            
Sbjct: 35  MVSFRAFLNSPVGPKTTHFWGPVANWGFVAAGLADMNKPPEMISGNMT------------ 94

Query: 61  ALVIAAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWARSQGYLSEKKDEA 120
               AAMCVYS LFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWA++QGYLSEKKDEA
Sbjct: 95  ----AAMCVYSGLFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWAKAQGYLSEKKDEA 141

Query: 121 ASQ 124
           ASQ
Sbjct: 155 ASQ 141

[Close]

BLAST of Lsi01G010260 vs. NCBI nr
Match: XP_022950836.1 (mitochondrial pyruvate carrier 1 [Cucurbita moschata] >XP_023544307.1 mitochondrial pyruvate carrier 1 [Cucurbita pepo subsp. pepo] >KAG6604212.1 Mitochondrial pyruvate carrier 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034373.1 Mitochondrial pyruvate carrier 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 211.5 bits (537), Expect = 4.2e-51
Identity = 105/123 (85.37%), Postives = 107/123 (86.99%), Query Frame = 0


Query: 1   MASFRAFLNSPVGPKTTHFWGPVANWGFVAAGLADMNKPPEMISGNMTAVSFSLVSVVIS 60
           MASFRAFLNSPVGPKTTHFWGPVANWGFVAAGLADMNKPPEMISGNMT            
Sbjct: 1   MASFRAFLNSPVGPKTTHFWGPVANWGFVAAGLADMNKPPEMISGNMT------------ 60

Query: 61  ALVIAAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWARSQGYLSEKKDEA 120
               AAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQ+YQFSRWA+SQGYLSEKKDEA
Sbjct: 61  ----AAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQMYQFSRWAKSQGYLSEKKDEA 107

Query: 121 ASQ 124
           ASQ
Sbjct: 121 ASQ 107

[Close]

BLAST of Lsi01G010260 vs. NCBI nr
Match: XP_022977826.1 (mitochondrial pyruvate carrier 1 [Cucurbita maxima] >XP_022977827.1 mitochondrial pyruvate carrier 1 [Cucurbita maxima])

HSP 1 Score: 209.9 bits (533), Expect = 1.2e-50
Identity = 104/123 (84.55%), Postives = 106/123 (86.18%), Query Frame = 0


Query: 1   MASFRAFLNSPVGPKTTHFWGPVANWGFVAAGLADMNKPPEMISGNMTAVSFSLVSVVIS 60
           M SFRAFLNSPVGPKTTHFWGPVANWGFVAAGLADMNKPPEMISGNMT            
Sbjct: 1   MVSFRAFLNSPVGPKTTHFWGPVANWGFVAAGLADMNKPPEMISGNMT------------ 60

Query: 61  ALVIAAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWARSQGYLSEKKDEA 120
               AAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQ+YQFSRWA+SQGYLSEKKDEA
Sbjct: 61  ----AAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQMYQFSRWAKSQGYLSEKKDEA 107

Query: 121 ASQ 124
           ASQ
Sbjct: 121 ASQ 107

[Close]

BLAST of Lsi01G010260 vs. NCBI nr
Match: XP_004141942.1 (mitochondrial pyruvate carrier 1 [Cucumis sativus] >KGN48474.1 hypothetical protein Csa_003432 [Cucumis sativus])

HSP 1 Score: 209.5 bits (532), Expect = 1.6e-50
Identity = 104/123 (84.55%), Postives = 106/123 (86.18%), Query Frame = 0


Query: 1   MASFRAFLNSPVGPKTTHFWGPVANWGFVAAGLADMNKPPEMISGNMTAVSFSLVSVVIS 60
           MASFRAFLNSPVGPKTTHFWGPVANWGFVAAGLADMNKPPEMISGNMT            
Sbjct: 1   MASFRAFLNSPVGPKTTHFWGPVANWGFVAAGLADMNKPPEMISGNMT------------ 60

Query: 61  ALVIAAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWARSQGYLSEKKDEA 120
               AAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWA++QGYLSEKKDEA
Sbjct: 61  ----AAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWAKAQGYLSEKKDEA 107

Query: 121 ASQ 124
            SQ
Sbjct: 121 GSQ 107

[Close]

BLAST of Lsi01G010260 vs. NCBI nr
Match: XP_038882015.1 (mitochondrial pyruvate carrier 1 [Benincasa hispida])

HSP 1 Score: 208.0 bits (528), Expect = 4.7e-50
Identity = 103/123 (83.74%), Postives = 106/123 (86.18%), Query Frame = 0


Query: 1   MASFRAFLNSPVGPKTTHFWGPVANWGFVAAGLADMNKPPEMISGNMTAVSFSLVSVVIS 60
           MASFRAFLNSPVGPKTTHFWGPVANWGFVAAGLADMNKPPEMISGNMT            
Sbjct: 1   MASFRAFLNSPVGPKTTHFWGPVANWGFVAAGLADMNKPPEMISGNMT------------ 60

Query: 61  ALVIAAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWARSQGYLSEKKDEA 120
               AAMCVYS LFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWA++QGYLSEKKD+A
Sbjct: 61  ----AAMCVYSGLFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWAKAQGYLSEKKDKA 107

Query: 121 ASQ 124
           ASQ
Sbjct: 121 ASQ 107

[Close]

BLAST of Lsi01G010260 vs. NCBI nr
Match: XP_016899143.1 (PREDICTED: mitochondrial pyruvate carrier 1 isoform X1 [Cucumis melo])

HSP 1 Score: 208.0 bits (528), Expect = 4.7e-50
Identity = 103/123 (83.74%), Postives = 105/123 (85.37%), Query Frame = 0


Query: 1   MASFRAFLNSPVGPKTTHFWGPVANWGFVAAGLADMNKPPEMISGNMTAVSFSLVSVVIS 60
           M SFRAFLNSPVGPKTTHFWGPVANWGFVAAGLADMNKPPEMISGNMT            
Sbjct: 35  MVSFRAFLNSPVGPKTTHFWGPVANWGFVAAGLADMNKPPEMISGNMT------------ 94

Query: 61  ALVIAAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWARSQGYLSEKKDEA 120
               AAMCVYS LFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWA++QGYLSEKKDEA
Sbjct: 95  ----AAMCVYSGLFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWAKAQGYLSEKKDEA 141

Query: 121 ASQ 124
           ASQ
Sbjct: 155 ASQ 141

[Close]

BLAST of Lsi01G010260 vs. TAIR 10
Match: AT5G20090.1 (Uncharacterised protein family (UPF0041) )

HSP 1 Score: 186.4 bits (472), Expect = 1.4e-47
Identity = 89/116 (76.72%), Postives = 96/116 (82.76%), Query Frame = 0


Query: 4   FRAFLNSPVGPKTTHFWGPVANWGFVAAGLADMNKPPEMISGNMTAVSFSLVSVVISALV 63
           F+AFLNSP+GPKTTHFWGP+ANWGFVAAGL DM KPPEMISGNM+               
Sbjct: 6   FQAFLNSPIGPKTTHFWGPIANWGFVAAGLVDMQKPPEMISGNMS--------------- 65

Query: 64  IAAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWARSQGYLSEKKDE 120
            +AMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQ SRWAR+QGYLS KK+E
Sbjct: 66  -SAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQLSRWARAQGYLSSKKEE 105

[Close]

BLAST of Lsi01G010260 vs. TAIR 10
Match: AT5G20090.2 (Uncharacterised protein family (UPF0041) )

HSP 1 Score: 186.4 bits (472), Expect = 1.4e-47
Identity = 89/116 (76.72%), Postives = 96/116 (82.76%), Query Frame = 0


Query: 4   FRAFLNSPVGPKTTHFWGPVANWGFVAAGLADMNKPPEMISGNMTAVSFSLVSVVISALV 63
           F+AFLNSP+GPKTTHFWGP+ANWGFVAAGL DM KPPEMISGNM+               
Sbjct: 6   FQAFLNSPIGPKTTHFWGPIANWGFVAAGLVDMQKPPEMISGNMS--------------- 65

Query: 64  IAAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWARSQGYLSEKKDE 120
            +AMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQ SRWAR+QGYLS KK+E
Sbjct: 66  -SAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQLSRWARAQGYLSSKKEE 105

[Close]

BLAST of Lsi01G010260 vs. TAIR 10
Match: AT5G20090.3 (Uncharacterised protein family (UPF0041) )

HSP 1 Score: 174.5 bits (441), Expect = 5.3e-44
Identity = 83/108 (76.85%), Postives = 89/108 (82.41%), Query Frame = 0


Query: 4   FRAFLNSPVGPKTTHFWGPVANWGFVAAGLADMNKPPEMISGNMTAVSFSLVSVVISALV 63
           F+AFLNSP+GPKTTHFWGP+ANWGFVAAGL DM KPPEMISGNM+               
Sbjct: 6   FQAFLNSPIGPKTTHFWGPIANWGFVAAGLVDMQKPPEMISGNMS--------------- 65

Query: 64  IAAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWARSQG 112
            +AMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQ SRWAR+QG
Sbjct: 66  -SAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQLSRWARAQG 97

[Close]

BLAST of Lsi01G010260 vs. TAIR 10
Match: AT4G22310.1 (Uncharacterised protein family (UPF0041) )

HSP 1 Score: 59.7 bits (143), Expect = 1.9e-09
Identity = 35/122 (28.69%), Postives = 56/122 (45.90%), Query Frame = 0


Query: 2   ASFRAFLNSPVGPKTTHFWGPVANWGFVAAGLADMNKPPEMISGNMTAVSFSLVSVVISA 61
           +  +A  N P GPKT HFW P   WG   A +AD  KPPE +S                 
Sbjct: 4   SKLQAIWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQ------------- 63

Query: 62  LVIAAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWARSQGYLSEKKDEAA 121
             IA  C    ++ R++ ++ P+N+ L + + +     +YQ +R  +   Y +E +   A
Sbjct: 64  --IAVTCT-GVIWSRYSMVINPKNWNLFSVNVAMAGTGIYQLARKIK-HDYATEAEPAVA 108

Query: 122 SQ 124
           S+
Sbjct: 124 SE 108

[Close]

BLAST of Lsi01G010260 vs. TAIR 10
Match: AT4G14695.1 (Uncharacterised protein family (UPF0041) )

HSP 1 Score: 56.6 bits (135), Expect = 1.6e-08
Identity = 35/114 (30.70%), Postives = 52/114 (45.61%), Query Frame = 0


Query: 2   ASFRAFLNSPVGPKTTHFWGPVANWGFVAAGLADMNKPPEMISGNMTAVSFSLVSVVISA 61
           +  +A  N P GPKT HFW P   WG   A +AD  KPPE IS                 
Sbjct: 4   SKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFQKPPENIS---------------YL 63

Query: 62  LVIAAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWARSQGYLSE 116
             IA  C    ++ R + ++ P+N+ L + + +     +YQ +R  +   Y+SE
Sbjct: 64  QQIAVTCT-GMIWCRCSTIITPKNWNLFSVNVAMAATGIYQLTRKIK-YDYVSE 100

The following BLAST results are available for this feature:

BLAST of Lsi01G010260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q949R9	1.9e-46	76.72	Mitochondrial pyruvate carrier 1 OS=Arabidopsis thaliana OX=3702 GN=MPC1 PE=3 SV...	[more]
Q3ZCG2	5.8e-19	51.58	Mitochondrial pyruvate carrier 1 OS=Bos taurus OX=9913 GN=MPC1 PE=1 SV=1	[more]
Q9Y5U8	9.9e-19	53.33	Mitochondrial pyruvate carrier 1 OS=Homo sapiens OX=9606 GN=MPC1 PE=1 SV=1	[more]
P63030	2.9e-18	52.22	Mitochondrial pyruvate carrier 1 OS=Mus musculus OX=10090 GN=Mpc1 PE=1 SV=1	[more]
P63031	2.9e-18	52.22	Mitochondrial pyruvate carrier 1 OS=Rattus norvegicus OX=10116 GN=Mpc1 PE=3 SV=1	[more]

BLAST of Lsi01G010260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GFX0	2.0e-51	85.37	Mitochondrial pyruvate carrier OS=Cucurbita moschata OX=3662 GN=LOC111453819 PE=...	[more]
A0A6J1IJJ0	5.9e-51	84.55	Mitochondrial pyruvate carrier OS=Cucurbita maxima OX=3661 GN=LOC111478010 PE=3 ...	[more]
A0A0A0KI44	7.8e-51	84.55	Mitochondrial pyruvate carrier OS=Cucumis sativus OX=3659 GN=Csa_6G489900 PE=3 S...	[more]
A0A6J1BVP7	2.3e-50	82.93	Mitochondrial pyruvate carrier OS=Momordica charantia OX=3673 GN=LOC111005937 PE...	[more]
A0A1S4DT60	2.3e-50	83.74	Mitochondrial pyruvate carrier OS=Cucumis melo OX=3656 GN=LOC103484731 PE=3 SV=1	[more]

BLAST of Lsi01G010260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022950836.1	4.2e-51	85.37	mitochondrial pyruvate carrier 1 [Cucurbita moschata] >XP_023544307.1 mitochondr...	[more]
XP_022977826.1	1.2e-50	84.55	mitochondrial pyruvate carrier 1 [Cucurbita maxima] >XP_022977827.1 mitochondria...	[more]
XP_004141942.1	1.6e-50	84.55	mitochondrial pyruvate carrier 1 [Cucumis sativus] >KGN48474.1 hypothetical prot...	[more]
XP_038882015.1	4.7e-50	83.74	mitochondrial pyruvate carrier 1 [Benincasa hispida]	[more]
XP_016899143.1	4.7e-50	83.74	PREDICTED: mitochondrial pyruvate carrier 1 isoform X1 [Cucumis melo]	[more]

BLAST of Lsi01G010260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20090.1	1.4e-47	76.72	Uncharacterised protein family (UPF0041)	[more]
AT5G20090.2	1.4e-47	76.72	Uncharacterised protein family (UPF0041)	[more]
AT5G20090.3	5.3e-44	76.85	Uncharacterised protein family (UPF0041)	[more]
AT4G22310.1	1.9e-09	28.69	Uncharacterised protein family (UPF0041)	[more]
AT4G14695.1	1.6e-08	30.70	Uncharacterised protein family (UPF0041)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005336	Mitochondrial pyruvate carrier	PFAM	PF03650	MPC	coord: 4..50 e-value: 5.1E-17 score: 62.0 coord: 59..119 e-value: 1.8E-13 score: 50.6
None	No IPR available	PANTHER	PTHR14154	UPF0041 BRAIN PROTEIN 44-RELATED	coord: 2..121
None	No IPR available	PANTHER	PTHR14154:SF81	MITOCHONDRIAL PYRUVATE CARRIER 1	coord: 2..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G010260.1	Lsi01G010260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006850	mitochondrial pyruvate transmembrane transport
cellular_component	GO:0031305	integral component of mitochondrial inner membrane
cellular_component	GO:0005743	mitochondrial inner membrane
molecular_function	GO:0050833	pyruvate transmembrane transporter activity