Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGCAGACCAAGGAAGTCAAGAAGGGCTTACAAATCCTTTTAAGTTTGAGGAATATTGGACAAGATACGATGAATGTGTTGAGATCATCAACAATAATGGCGATTGGAATCCTGGTATGTCTCATCTATCCTCTTTATCTAAAAATCTTAGTAAATGCTCTGATGCCTTATCAAAATGGGGTAAAGGGATGAATTATCAGAGAAGAGATAAAATAAATGAATGTAAAAGAGCCCTTAAAGATGCCTACTCTAATATTCTGATGGTTAACTTTGATGTAATTCATGGTCTTGAATTTGAGCTAGACAAATTAATGGAAGAAGAGGAAATATACTGGAAACAGAGGTCTATGGAAGATTGGTTAAAATGGGGGGATAGAAATTCCAAGTGGTTTCATAAGAAAGCCACGATAAGAAGGAAAAGTAATGAAATATATGGGATTGTGGATGATAATGGCCTATGGTATGAGGATCCTTCTTTAATTGAAAACACCTTCATTTCTTATTTTGAGAATCTGTTTGAGTCTTCTAACCCAGATTTAATAGCTATTGAGAATTCTTTAGATGGCCTAGTTCCTAAAGTCAATCAATCCATGAATAACAGTTTAATGGCCCCCTTTACCAGAACTGAAATTGAAAATGCAATAAAACAAATGTTCCCAACCAAAGCCCCGGGTCCAGATGGTTATTTAGCCATATTTATCAGAAATATTGGAATATTGTAG
mRNA sequence
ATGAAGGCAGACCAAGGAAGTCAAGAAGGGCTTACAAATCCTTTTAAGTTTGAGGAATATTGGACAAGATACGATGAATGTGTTGAGATCATCAACAATAATGGCGATTGGAATCCTGGTATGTCTCATCTATCCTCTTTATCTAAAAATCTTAGTAAATGCTCTGATGCCTTATCAAAATGGGGTAAAGGGATGAATTATCAGAGAAGAGATAAAATAAATGAATGTAAAAGAGCCCTTAAAGATGCCTACTCTAATATTCTGATGGTTAACTTTGATGTAATTCATGGTCTTGAATTTGAGCTAGACAAATTAATGGAAGAAGAGGAAATATACTGGAAACAGAGGTCTATGGAAGATTGGTTAAAATGGGGGGATAGAAATTCCAAGTGGTTTCATAAGAAAGCCACGATAAGAAGGAAAAGTAATGAAATATATGGGATTGTGGATGATAATGGCCTATGGTATGAGGATCCTTCTTTAATTGAAAACACCTTCATTTCTTATTTTGAGAATCTGTTTGAGTCTTCTAACCCAGATTTAATAGCTATTGAGAATTCTTTAGATGGCCTAGTTCCTAAAGTCAATCAATCCATGAATAACAGTTTAATGGCCCCCTTTACCAGAACTGAAATTGAAAATGCAATAAAACAAATGTTCCCAACCAAAGCCCCGGGTCCAGATGGTTATTTAGCCATATTTATCAGAAATATTGGAATATTGTAG
Coding sequence (CDS)
ATGAAGGCAGACCAAGGAAGTCAAGAAGGGCTTACAAATCCTTTTAAGTTTGAGGAATATTGGACAAGATACGATGAATGTGTTGAGATCATCAACAATAATGGCGATTGGAATCCTGGTATGTCTCATCTATCCTCTTTATCTAAAAATCTTAGTAAATGCTCTGATGCCTTATCAAAATGGGGTAAAGGGATGAATTATCAGAGAAGAGATAAAATAAATGAATGTAAAAGAGCCCTTAAAGATGCCTACTCTAATATTCTGATGGTTAACTTTGATGTAATTCATGGTCTTGAATTTGAGCTAGACAAATTAATGGAAGAAGAGGAAATATACTGGAAACAGAGGTCTATGGAAGATTGGTTAAAATGGGGGGATAGAAATTCCAAGTGGTTTCATAAGAAAGCCACGATAAGAAGGAAAAGTAATGAAATATATGGGATTGTGGATGATAATGGCCTATGGTATGAGGATCCTTCTTTAATTGAAAACACCTTCATTTCTTATTTTGAGAATCTGTTTGAGTCTTCTAACCCAGATTTAATAGCTATTGAGAATTCTTTAGATGGCCTAGTTCCTAAAGTCAATCAATCCATGAATAACAGTTTAATGGCCCCCTTTACCAGAACTGAAATTGAAAATGCAATAAAACAAATGTTCCCAACCAAAGCCCCGGGTCCAGATGGTTATTTAGCCATATTTATCAGAAATATTGGAATATTGTAG
Protein sequence
MKADQGSQEGLTNPFKFEEYWTRYDECVEIINNNGDWNPGMSHLSSLSKNLSKCSDALSKWGKGMNYQRRDKINECKRALKDAYSNILMVNFDVIHGLEFELDKLMEEEEIYWKQRSMEDWLKWGDRNSKWFHKKATIRRKSNEIYGIVDDNGLWYEDPSLIENTFISYFENLFESSNPDLIAIENSLDGLVPKVNQSMNNSLMAPFTRTEIENAIKQMFPTKAPGPDGYLAIFIRNIGIL
Homology
BLAST of Lcy13g013460 vs. ExPASy Swiss-Prot
Match:
P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)
HSP 1 Score: 52.4 bits (124), Expect = 8.4e-06
Identity = 33/111 (29.73%), Postives = 52/111 (46.85%), Query Frame = 0
Query: 126 DRNSKWFHKKATIRRKSNEIYGIVDDNGLWYEDPSLIENTFISYFENLFESSNPDLIAIE 185
DR S++F+ + +I + ++G EDP I + S+++NLF A E
Sbjct: 369 DRGSRFFYALEKKKGNRKQITCLFAEDGTPLEDPEAIRDRARSFYQNLFSPDPISPDACE 428
Query: 186 NSLDGLVPKVNQSMNNSLMAPFTRTEIENAIKQMFPTKAPGPDGYLAIFIR 237
DGL P V++ L P T E+ A++ M K+PG DG F +
Sbjct: 429 ELWDGL-PVVSERRKERLETPITLDELSQALRLMPHNKSPGLDGLTIEFFQ 478
BLAST of Lcy13g013460 vs. ExPASy TrEMBL
Match:
A0A803PWX1 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 166.0 bits (419), Expect = 1.9e-37
Identity = 87/222 (39.19%), Postives = 127/222 (57.21%), Query Frame = 0
Query: 13 NPFKFEEYWTRYDECVEIINNNGDWNPGMSHLSSLSKNLSKCSDALSKWGKGMNYQRRDK 72
N F FEE W + +EC EII+N G S ++KC AL W K + ++
Sbjct: 782 NRFHFEEAWCQEEECTEIIDNMWKERQGRGRPVSFRCKINKCGKALQDWNKKKKARLNNE 841
Query: 73 INECKRALKDAYSNILMVNFDVIHGLEFELDKLMEEEEIYWKQRSMEDWLKWGDRNSKWF 132
I + K+ L + ++ I +E +L+ L+E++E YW+QRS WL+WGDRN+K+F
Sbjct: 842 IAKTKKILHELTMQQQPGVWEAIQHMEDKLNGLLEKDEQYWRQRSRALWLQWGDRNTKYF 901
Query: 133 HKKATIRRKSNEIYGIVDDNGLWYEDPSLIENTFISYFENLFESSNPDLIAIENSLDGLV 192
H KA+ RRK NEI G+ D G+W +D L+ Y++ LF S+ D ++ L+ +
Sbjct: 902 HHKASSRRKKNEIKGLQDQMGVWQDDKLLVCQIVEDYYKGLFMGSDIDQGVMQEVLEVVQ 961
Query: 193 PKVNQSMNNSLMAPFTRTEIENAIKQMFPTKAPGPDGYLAIF 235
PKV+ SMN LM F+ E+ A+K M PTKAPG DG A+F
Sbjct: 962 PKVSMSMNEELMVDFSVEEVVQAVKGMNPTKAPGADGLPALF 1003
BLAST of Lcy13g013460 vs. ExPASy TrEMBL
Match:
A0A803PV25 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 164.9 bits (416), Expect = 4.3e-37
Identity = 87/224 (38.84%), Postives = 128/224 (57.14%), Query Frame = 0
Query: 15 FKFEEYWTRYDECVEIINNNGDWNPGMSHLSSLSKNLSKCSDALSKWGKGMNYQRRDKIN 74
F FEE W + +EC EI++ + S ++KC AL W N +++ K+N
Sbjct: 791 FHFEEAWCQEEECTEIVDRLWSEENVSGRVGSFRCKINKCGKALQTW----NRKKKSKLN 850
Query: 75 ECKRALKDAYSNILMVN----FDVIHGLEFELDKLMEEEEIYWKQRSMEDWLKWGDRNSK 134
LK A + M+ ++ I +E +L+ L+E++E YW+QRS WL+WGDRN+K
Sbjct: 851 SEVEKLKKALHELTMMQQPGVWETIQQMEAKLNGLLEKDEQYWRQRSRALWLQWGDRNTK 910
Query: 135 WFHKKATIRRKSNEIYGIVDDNGLWYEDPSLIENTFISYFENLFESSNPDLIAIENSLDG 194
+FH KA+ RRK NEI G+ D G+W +D L+ Y+E LF SS+ + + L
Sbjct: 911 YFHHKASARRKKNEIKGLQDHMGVWQDDKVLVCRIVEDYYEKLFTSSDINESVLNEVLSV 970
Query: 195 LVPKVNQSMNNSLMAPFTRTEIENAIKQMFPTKAPGPDGYLAIF 235
+ PKV+ MNN L+A F E+ A+K+M PTKAPG DG A+F
Sbjct: 971 VQPKVSSVMNNDLLAEFGEEEVIRAVKEMNPTKAPGADGLPALF 1010
BLAST of Lcy13g013460 vs. ExPASy TrEMBL
Match:
A0A2N9GY02 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS32387 PE=4 SV=1)
HSP 1 Score: 161.4 bits (407), Expect = 4.8e-36
Identity = 84/222 (37.84%), Postives = 124/222 (55.86%), Query Frame = 0
Query: 14 PFKFEEYWTRYDECVEIINNNGDWNPGMSHLSSLSKNLSKCSDALSKWGKGMNYQRRDKI 73
P +FE WTR+DEC II D N + + SL + C LS+W K ++
Sbjct: 232 PIRFEAEWTRFDECENIIKQAWDINVDDNSMFSLCAKIKHCRTLLSQWSKTHLGNLSTRV 291
Query: 74 NECKRALKDA-YSNILMVNFDVIHGLEFELDKLMEEEEIYWKQRSMEDWLKWGDRNSKWF 133
E L++ + N+ F + L+ EL+ LME +E++WKQRS WL+ GD+N+K+F
Sbjct: 292 REKTDQLQEVDFGNMDDEEFTAMQNLQHELNDLMEWDELHWKQRSRVTWLQEGDQNTKFF 351
Query: 134 HKKATIRRKSNEIYGIVDDNGLWYEDPSLIENTFISYFENLFESSNPDLIAIENSLDGLV 193
H KA+ RRK N I GI D +G W DP LI T + Y+ N+F S +E +++G+
Sbjct: 352 HTKASQRRKRNTISGIHDAHGNWITDPELIRETIVEYYGNIFTSDGSH--RLEEAVEGVE 411
Query: 194 PKVNQSMNNSLMAPFTRTEIENAIKQMFPTKAPGPDGYLAIF 235
+V MN+ L+ P+ E+ A+ QM P+K PGPDG +F
Sbjct: 412 SRVTPEMNDMLLKPYHADEVYTALHQMHPSKVPGPDGMSILF 451
BLAST of Lcy13g013460 vs. ExPASy TrEMBL
Match:
A0A2N9I611 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS47331 PE=4 SV=1)
HSP 1 Score: 160.6 bits (405), Expect = 8.1e-36
Identity = 84/221 (38.01%), Postives = 131/221 (59.28%), Query Frame = 0
Query: 15 FKFEEYWTRYDECVEIINNN-GDWNPGMSHLSSLSKNLSKCSDALSKWGKGMNYQRRDKI 74
F+FE+ WT+++EC ++I + D + L + L C L W K + K+
Sbjct: 484 FRFEQAWTKHEECEKVIVDVWRDTESPETPTFQLVEKLKLCRKELIGWSKASFGNIKIKL 543
Query: 75 NECKRALKDAYSNILMVNFDVIHGLEFELDKLMEEEEIYWKQRSMEDWLKWGDRNSKWFH 134
E + LK SN + I L+ E+++L+E+EE+YWKQR+ WLK GDRN+K+FH
Sbjct: 544 EELEETLKQLESNNQGQHSAQIKILKMEVNELLEKEEVYWKQRARIAWLKEGDRNTKFFH 603
Query: 135 KKATIRRKSNEIYGIVDDNGLWYEDPSLIENTFISYFENLFESSNPDLIAIENSLDGLVP 194
KAT R+K N + G++D G W++DP+ +E + YFE++F S+N + +++S +G+
Sbjct: 604 SKATQRQKKNMVKGLIDKEGRWHQDPNKMEEIAVEYFEDIFTSTNS--VDLDSSTEGIEK 663
Query: 195 KVNQSMNNSLMAPFTRTEIENAIKQMFPTKAPGPDGYLAIF 235
V +MN SL F E++ AI QM +KAPGPDG+ A F
Sbjct: 664 FVTDAMNQSLTCVFREEEVDEAIHQMHLSKAPGPDGFSAAF 702
BLAST of Lcy13g013460 vs. ExPASy TrEMBL
Match:
A0A2P6RW94 (Putative RNA-directed DNA polymerase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0136131 PE=4 SV=1)
HSP 1 Score: 157.9 bits (398), Expect = 5.3e-35
Identity = 78/223 (34.98%), Postives = 126/223 (56.50%), Query Frame = 0
Query: 15 FKFEEYWTRYDECVEIINNNGDWNPGMSHLSSLSKNLSKCSDALSKWGKGMNYQRRDKIN 74
F+FEE W + EC ++I ++ + + + + L W +G+ QR+ ++
Sbjct: 83 FRFEEMWLNHSECSQVIKTGWLLPSTGESMTQVGRKIKQTGSLLLSWNEGVFQQRQVEMR 142
Query: 75 ECKRALKDAYS-NILMVNFDVIHGLEFELDKLMEEEEIYWKQRSMEDWLKWGDRNSKWFH 134
+R L + + +FD I L+F L++L+ E YW+QRS WL+ GDRN+ +FH
Sbjct: 143 LIQRKLDTVMAVDHQNSHFDEIKALQFRLNELLSINETYWRQRSKVQWLREGDRNTSFFH 202
Query: 135 KKATIRRKSNEIYGIVDDNGLWYEDPSLIENTFISYFENLFESSNPDLIAIENSLDGLVP 194
++A+ RR N I G++ +NG W +P + N + Y+E F S D IA+ LD + P
Sbjct: 203 RRASNRRSRNRIKGLLTENGQWTSEPGEVTNILLQYYEASFRSEQSDPIAMNLILDCIQP 262
Query: 195 KVNQSMNNSLMAPFTRTEIENAIKQMFPTKAPGPDGYLAIFIR 237
+V +SMN LMAP++ EI+ A+ QM P+K+PGPDG F +
Sbjct: 263 RVTESMNGELMAPYSDDEIKRALFQMHPSKSPGPDGMSPCFFQ 305
BLAST of Lcy13g013460 vs. NCBI nr
Match:
XP_006491472.1 (uncharacterized protein LOC102626455 [Citrus sinensis])
HSP 1 Score: 172.9 bits (437), Expect = 3.3e-39
Identity = 94/224 (41.96%), Postives = 132/224 (58.93%), Query Frame = 0
Query: 17 FEEYWTRYDECVEIINNNGDWNPGMSHLSSLSK--NLSKCSDA-LSKWGKGMNYQRRDKI 76
+E+ W+ Y+ C I+ + + G S S + K ++K S A L W K R+ K
Sbjct: 329 YEDMWSSYEACSNIVRSEWESFDGNSWESPVQKFQRVAKRSLAHLKIWSKEEFEGRKKKQ 388
Query: 77 NECKRALKDAYSNILM-VNFDVIHGLEFELDKLMEEEEIYWKQRSMEDWLKWGDRNSKWF 136
NE LK L ++ + I LE ++ ++ +EE+YWKQRS DWLK GD+N+K+F
Sbjct: 389 NELIDRLKMTKQEPLQAIDGEEIRKLEDQISNMLVDEEVYWKQRSRADWLKEGDKNTKFF 448
Query: 137 HKKATIRRKSNEIYGIVDDNGLWYEDPSLIENTFISYFENLFESSNPDLIAIENSLDGLV 196
H KA+ RR+ N+I+G+ DD G W +DP IE F +F+ LF SSNP I +L GL+
Sbjct: 449 HSKASARRRKNKIWGVEDDQGNWVDDPEGIEGEFCGFFQQLFTSSNPSQTQISEALKGLL 508
Query: 197 PKVNQSMNNSLMAPFTRTEIENAIKQMFPTKAPGPDGYLAIFIR 237
PKV+Q MN L PFT +I A+ +M PTKAPGPDG A F +
Sbjct: 509 PKVSQEMNTHLEEPFTPEDITRALSEMCPTKAPGPDGLPAAFFQ 552
BLAST of Lcy13g013460 vs. NCBI nr
Match:
XP_024037590.1 (uncharacterized protein LOC112097210 [Citrus clementina])
HSP 1 Score: 169.1 bits (427), Expect = 4.7e-38
Identity = 83/225 (36.89%), Postives = 129/225 (57.33%), Query Frame = 0
Query: 17 FEEYWTRYDECVEIIN----NNGDWNPGMSHLSSLSKNLSKCSDALSKWGKGMNYQRRDK 76
+E+ W+ Y+ C I+ G W+ G ++ K + C L W + +++K
Sbjct: 204 YEDMWSHYEVCKNIVKEEWLKGGSWSQG-DPVTIFKKTSNNCLAQLRIWSRNEFDGQKEK 263
Query: 77 INECKRALKDAYSNILM-VNFDVIHGLEFELDKLMEEEEIYWKQRSMEDWLKWGDRNSKW 136
+ + K+ L + N I E +++K++ +EE+YWKQRS DWLK GD+N+K+
Sbjct: 264 LKQLKKKLSEMKHNFTQREEVSEIKSTEEQIEKMLLDEEVYWKQRSRADWLKEGDKNTKY 323
Query: 137 FHKKATIRRKSNEIYGIVDDNGLWYEDPSLIENTFISYFENLFESSNPDLIAIENSLDGL 196
FH KA+ R++ N I+G++D + +W +D +E F YF +LF +S+P IE +L GL
Sbjct: 324 FHSKASSRKRKNRIWGVMDQHDVWVDDREGVEKQFCEYFASLFTTSSPSEKQIEAALAGL 383
Query: 197 VPKVNQSMNNSLMAPFTRTEIENAIKQMFPTKAPGPDGYLAIFIR 237
P+V MNN L +PFT E+ A+ QM PTKAPGPDG A F +
Sbjct: 384 KPRVTLEMNNQLDSPFTEEEVSTALSQMCPTKAPGPDGLPAAFFQ 427
BLAST of Lcy13g013460 vs. NCBI nr
Match:
PRQ50695.1 (putative RNA-directed DNA polymerase [Rosa chinensis])
HSP 1 Score: 157.9 bits (398), Expect = 1.1e-34
Identity = 78/223 (34.98%), Postives = 126/223 (56.50%), Query Frame = 0
Query: 15 FKFEEYWTRYDECVEIINNNGDWNPGMSHLSSLSKNLSKCSDALSKWGKGMNYQRRDKIN 74
F+FEE W + EC ++I ++ + + + + L W +G+ QR+ ++
Sbjct: 83 FRFEEMWLNHSECSQVIKTGWLLPSTGESMTQVGRKIKQTGSLLLSWNEGVFQQRQVEMR 142
Query: 75 ECKRALKDAYS-NILMVNFDVIHGLEFELDKLMEEEEIYWKQRSMEDWLKWGDRNSKWFH 134
+R L + + +FD I L+F L++L+ E YW+QRS WL+ GDRN+ +FH
Sbjct: 143 LIQRKLDTVMAVDHQNSHFDEIKALQFRLNELLSINETYWRQRSKVQWLREGDRNTSFFH 202
Query: 135 KKATIRRKSNEIYGIVDDNGLWYEDPSLIENTFISYFENLFESSNPDLIAIENSLDGLVP 194
++A+ RR N I G++ +NG W +P + N + Y+E F S D IA+ LD + P
Sbjct: 203 RRASNRRSRNRIKGLLTENGQWTSEPGEVTNILLQYYEASFRSEQSDPIAMNLILDCIQP 262
Query: 195 KVNQSMNNSLMAPFTRTEIENAIKQMFPTKAPGPDGYLAIFIR 237
+V +SMN LMAP++ EI+ A+ QM P+K+PGPDG F +
Sbjct: 263 RVTESMNGELMAPYSDDEIKRALFQMHPSKSPGPDGMSPCFFQ 305
BLAST of Lcy13g013460 vs. NCBI nr
Match:
XP_023881891.1 (uncharacterized protein LOC111994244 [Quercus suber])
HSP 1 Score: 157.9 bits (398), Expect = 1.1e-34
Identity = 92/225 (40.89%), Postives = 130/225 (57.78%), Query Frame = 0
Query: 15 FKFEEYWTRYDECVEIINNNGDWNPG--MSHLSSLSKNLSKCSDALSKWGKGMNYQRRDK 74
F+FE WTR ++C +II G WN ++ ++ L C++ LS+W K + K
Sbjct: 77 FQFEAMWTRREDCKDII--QGVWNSSHEVNSPRGIAARLRCCAENLSEWNKMIFGNIPRK 136
Query: 75 INECKRALKD-AYSNILMVNFDVIHGLEFELDKLMEEEEIYWKQRSMEDWLKWGDRNSKW 134
I E K L +S+ I+ L E+++L++ EEI W+QRS WL GDRN+K+
Sbjct: 137 IQEKKETLNALVHSDRNGSLGGEINMLRKEINELLDSEEIKWQQRSRVQWLGLGDRNTKY 196
Query: 135 FHKKATIRRKSNEIYGIVDDNGLWYEDPSLIENTFISYFENLFESSNPDLIAIENSLDGL 194
FH KA+ RR+ N I GI+D+NG W + I +SYF+ ++ SS P I LD +
Sbjct: 197 FHTKASDRRRRNTINGIMDENGNWQDSTEGIAKVAVSYFQTIYSSSVP--TRISEVLDAI 256
Query: 195 VPKVNQSMNNSLMAPFTRTEIENAIKQMFPTKAPGPDGYLAIFIR 237
V + MN+SL+ FTR EIE A+ QM PTKAPGPDG AIF +
Sbjct: 257 PTTVTEEMNHSLIQEFTREEIETALNQMHPTKAPGPDGMSAIFFQ 297
BLAST of Lcy13g013460 vs. NCBI nr
Match:
XP_023878301.1 (uncharacterized protein LOC111990748 [Quercus suber])
HSP 1 Score: 157.1 bits (396), Expect = 1.9e-34
Identity = 86/223 (38.57%), Postives = 127/223 (56.95%), Query Frame = 0
Query: 15 FKFEEYWTRYDECVEIINNNGDWNPGMSHLSSLSKNLSKCSDALSKWGKGMNYQRRDKIN 74
F FE WT+ ++C II + + +S +S+NL C+ LSKW + Q KI
Sbjct: 201 FHFEAQWTKREDCKAIIEASWGFGVDLSTPEGISENLRICAVELSKWSSTIYGQIPKKIQ 260
Query: 75 ECKRALKDAYSNILMVNFDV-IHGLEFELDKLMEEEEIYWKQRSMEDWLKWGDRNSKWFH 134
+ + L L + + I+ L E++ L+++EE YW QR+ WLK GDRN+K+FH
Sbjct: 261 DKRSRLNTLAMRELDEDLSLEINRLREEINALLDDEETYWGQRAKAHWLKEGDRNTKFFH 320
Query: 135 KKATIRRKSNEIYGIVDDNGLWYEDPSLIENTFISYFENLFESSNPDLIAIENSLDGLVP 194
+A+ RRK N I GI D+ G W ++ I ISYF N++ SS+P IE + +
Sbjct: 321 AQASERRKQNTIVGIWDEQGRWCDNEESIAQAAISYFNNIYSSSHPS--QIEEVTEAIPF 380
Query: 195 KVNQSMNNSLMAPFTRTEIENAIKQMFPTKAPGPDGYLAIFIR 237
KV + MN SL+ FT+ E+ A+KQ+ P KAPGPDG A+F +
Sbjct: 381 KVTEEMNESLIREFTKEEVAVALKQIHPNKAPGPDGMSAVFFQ 421
BLAST of Lcy13g013460 vs. TAIR 10
Match:
AT1G43760.1 (DNAse I-like superfamily protein )
HSP 1 Score: 62.4 bits (150), Expect = 5.8e-10
Identity = 56/205 (27.32%), Postives = 98/205 (47.80%), Query Frame = 0
Query: 39 PGMSHLSSLSKNL---SKCSDALSKWGKGMNYQRRDKINECKRALKDAYSNILMVNFDVI 98
P SH+ SL ++L KC L++ G G N Q + K E +L+ S +L D +
Sbjct: 357 PVGSHMFSLGEHLKAAKKCCKLLNRQGFG-NIQHKTK--EALDSLESIQSQLLTNPSDSL 416
Query: 99 HGLEFELDK----LMEEEEIYWKQRSMEDWLKWGDRNSKWFHKKATIRRKSNEIYGIVDD 158
+E K E +++Q+S WL+ GD N+++FHK + N I + D
Sbjct: 417 FRVEHVARKKWNFFAAALESFYRQKSRIKWLQDGDANTRFFHKVILANQAKNLIKFLRMD 476
Query: 159 NGLWYEDPSLIENTFISYFENLFESSNPDLI--AIENSLDGLVPKVNQSMNNSLMAPFTR 218
+ + E+ + ++ ++Y+ +L S + L +++ D + N ++ + L A +
Sbjct: 477 DDVRVENVTQVKEMIVAYYTHLLGSDSDILTPDSVQRIKDIHPFRCNDTLASRLSALPSD 536
Query: 219 TEIENAIKQMFPTKAPGPDGYLAIF 235
EI A+ M KAPGPD + A F
Sbjct: 537 KEITAAVFAMPRNKAPGPDSFTAEF 558
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P14381 | 8.4e-06 | 29.73 | Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV... | [more] |
Match Name | E-value | Identity | Description | |
A0A803PWX1 | 1.9e-37 | 39.19 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803PV25 | 4.3e-37 | 38.84 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A2N9GY02 | 4.8e-36 | 37.84 | Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... | [more] |
A0A2N9I611 | 8.1e-36 | 38.01 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS47331 PE=4 SV=1 | [more] |
A0A2P6RW94 | 5.3e-35 | 34.98 | Putative RNA-directed DNA polymerase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2... | [more] |
Match Name | E-value | Identity | Description | |
AT1G43760.1 | 5.8e-10 | 27.32 | DNAse I-like superfamily protein | [more] |