Lcy13g011050 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy13g011050
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	binding partner of ACD11 1-like
Location	Chr13: 12216055 .. 12218626 (-)
RNA-Seq Expression	Lcy13g011050
Synteny	Lcy13g011050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACAACAACACTTCCCCTTCCCTTCTCTCTTCTCTTCTCTTCCTCCATTGCCGCCGCTCGATCTCCTCATCTTCCGCCGTCGCCGATTGCCTCTCCAAGCTTTCCTCTGCCTTTCAGAAATGTCGGTGAGTTCATCATCTTCTTCTTCTTCTTCTTGTGTTTTATCTGTGAATCTTTGATGCAGATCTGCCGCGTTTGCGTTCGGTTATTTGTTTTCTCTTATGGTGAATGTCTGCTGTGTTGATTTGGGGATTTTTAATTGTAATGTGGAAATAGGGTTTTTGATTTTGATTTTGATTTTCAAGATCTCTGTTTCTCTATCCTCTGGTTTCTTCAATTTGCTCTGATTCTGTTTGGCTGCCGACAAAATTCCACTGTGCATTTTTCTCCCTGTGGGAATTTATCAAGAAACGGTTGAGATTCTCGTTCGTTTGGATGATTTATGAAACAAAACAGTATCTTAATCAATTCATTCTTCTCGAATCAGATGTAGACTTCTTTTTCCCTAAAATTTTAATTCCTCTGTGAAATGCTGAACTGATTGAAGTGAGAATTACGAATGGCTAAATCCCTGCTAAACCCAATTTTCTGTTCTTAATCTTCTTACTTCGATGAACTGAATGAAGTGACAATTACAACTAGTAAAATCAGTGCTGAATCCAAAATTTTATATTTGTTCTTAACATTTCCTTCATTTCATATGTGGATTTGGGCATTGATTTGATTCGTGAATTATTAATATCAATCGAGGAAGAAATGACATTGTAGAAGTTTGAATTCCGAGCTTTGTGCTACATTAAAAAAAATTCTAGGTTGATTGGCGAAGGCGTATTTAATCTCTTATTCATATTCTTAACACGAACACTTGCATTTCTTTATTCTATTTAATGTGTTTTCTTTTTAAAATCCCATGTAGATGAGAACTGTGAAGGTCAGCAACATCTCAAAGGCTACTTCTGAGAGAGACATCAAAGAATTCTTTTCATTCTCTGGTGAAATCCTTTATGTTGAAATGCAAAGGTTCGTGGTTATATTCTATCTGTTGATTTATTTGGAAAATTCATGCTGAAGAATTAGATTTTCTTTTTCTTTTTTTTGTGTAGAGAAACTGAAAATACTCAGGTTGCTTATGTTACATATAAGGATTCTCAAGGAGCAGATACTGCCATACTTTTGACAGTATGTTCCTTTATGCACATTGGACTTTTTATTGTTGTAATTATGTTTGTTTTTGTTAACTTTTTTCTCTTTTTTTCTCTCTCTCTCTCTATCTCTCAGGGAGCAAAAATTGGTGATCTATCTGTAACAATTACTCTGGTTGAGAATTATCATCTTCCACCTGAAGCAATGTCATCAATCCTGGTAATTCTGCCTTGTTTACGAGTCTAGATCGTCTCGTGTATATGCATCATTGTTGACCGTTGAATTGGTGCACAAAAATGAATTACATGTGTTTGGTTTTGAAATTTTTTTGGTTTGAAATCTTTCATGCTGTCATCAGCTTCAGTTGTTTGAAAAGACTTTGAGTACCTTGAAGCAACTAAAATCAAGTAGTTGTCTTTGTCTTCGAAGGGGTATTTCAAAGTACTTACTGTTTCTTAAATCGAAATGACCTTTTGAAGGATAAGAGGCAAACTGTTTCCGGGATTGCTCCGAATCAGGCTGAAGATGTCGTAAGTACAATGCTTGCCAAGGGCTTCATCTTAGGGAAGGATGCCCTCAACAAGGCAAAAGCATTCGACGAACGACACCAGTTGACGTCGAATGCTTCTGCGACCGTCGCTTCCATTGACCGCAAGATGGGCATAACCGAGAAAATAACTGCAGGCACAGCAGTAGTAAATGAAAAGGTCAGGGAGATGGATGAAATGTTCCAGGTTTCTGAGAAGACGAAATCCGCCCTCGCAGTTGCCGAGCAGAAGGCAAGCAGTGCTGGAACCGCGCTCATGAGTAACTATTATGTGTTAACTGGAGCAGCATGGTTTTCAAATGCTGTAACTGCAGTTACAAAAGCTGCTGAGGAAGTGACCCAGATGACCAAGGCAAAAGTCGAGAAAGCCGAGGAGGAGAAAAAGGAGAGCATATACCGTGAAAGAACCGGGATCATCAATAATTTCGCCGAGCTCCATCTCGACGAGCCTTTACCGGGAGAGCCTGCTATCGTTCCAGTTAATTCAGCCGATAGATAAGATAGTAAGTTGTGAATCATATGCATGAAAACCTACACTTGTGAATTACATTCCTTCCCCATCTTTGCTGTATGATATACACATTTCATCTAGAGGTGCTCCAATTACAGAGTTTACTTCTTTTATAAAGCTGTTCTTCTTGTGGATGTTGAAATGTTGTGACATTCTTTTGGGTAGAAAAAAGAAAATTACTTTTGAATACTTGATTTTGTATACTGTTTCATTCATCCATTGTAATTTGTAATTTAGATATATAGTCTCGTTTTTCTACAGCCAATTTTAGGTGAAATATGAATTGGCATATTAGGGAAACGTATATTCATTATTGACGAATATCATTTAATTTATTGTCTCTTTCATCTCATCTCTTGTTTAAATGAGA

mRNA sequence

AAACAACAACACTTCCCCTTCCCTTCTCTCTTCTCTTCTCTTCCTCCATTGCCGCCGCTCGATCTCCTCATCTTCCGCCGTCGCCGATTGCCTCTCCAAGCTTTCCTCTGCCTTTCAGAAATGTCGATGAGAACTGTGAAGGTCAGCAACATCTCAAAGGCTACTTCTGAGAGAGACATCAAAGAATTCTTTTCATTCTCTGGTGAAATCCTTTATGTTGAAATGCAAAGAGAAACTGAAAATACTCAGGTTGCTTATGTTACATATAAGGATTCTCAAGGAGCAGATACTGCCATACTTTTGACAGGAGCAAAAATTGGTGATCTATCTGTAACAATTACTCTGGTTGAGAATTATCATCTTCCACCTGAAGCAATGTCATCAATCCTGGATAAGAGGCAAACTGTTTCCGGGATTGCTCCGAATCAGGCTGAAGATGTCGTAAGTACAATGCTTGCCAAGGGCTTCATCTTAGGGAAGGATGCCCTCAACAAGGCAAAAGCATTCGACGAACGACACCAGTTGACGTCGAATGCTTCTGCGACCGTCGCTTCCATTGACCGCAAGATGGGCATAACCGAGAAAATAACTGCAGGCACAGCAGTAGTAAATGAAAAGGTCAGGGAGATGGATGAAATGTTCCAGGTTTCTGAGAAGACGAAATCCGCCCTCGCAGTTGCCGAGCAGAAGGCAAGCAGTGCTGGAACCGCGCTCATGAGTAACTATTATGTGTTAACTGGAGCAGCATGGTTTTCAAATGCTGTAACTGCAGTTACAAAAGCTGCTGAGGAAGTGACCCAGATGACCAAGGCAAAAGTCGAGAAAGCCGAGGAGGAGAAAAAGGAGAGCATATACCGTGAAAGAACCGGGATCATCAATAATTTCGCCGAGCTCCATCTCGACGAGCCTTTACCGGGAGAGCCTGCTATCGTTCCAGTTAATTCAGCCGATAGATAAGATAGTAAGTTGTGAATCATATGCATGAAAACCTACACTTGTGAATTACATTCCTTCCCCATCTTTGCTGTATGATATACACATTTCATCTAGAGGTGCTCCAATTACAGAGTTTACTTCTTTTATAAAGCTGTTCTTCTTGTGGATGTTGAAATGTTGTGACATTCTTTTGGGTAGAAAAAAGAAAATTACTTTTGAATACTTGATTTTGTATACTGTTTCATTCATCCATTGTAATTTGTAATTTAGATATATAGTCTCGTTTTTCTACAGCCAATTTTAGGTGAAATATGAATTGGCATATTAGGGAAACGTATATTCATTATTGACGAATATCATTTAATTTATTGTCTCTTTCATCTCATCTCTTGTTTAAATGAGA

Coding sequence (CDS)

ATGTCGATGAGAACTGTGAAGGTCAGCAACATCTCAAAGGCTACTTCTGAGAGAGACATCAAAGAATTCTTTTCATTCTCTGGTGAAATCCTTTATGTTGAAATGCAAAGAGAAACTGAAAATACTCAGGTTGCTTATGTTACATATAAGGATTCTCAAGGAGCAGATACTGCCATACTTTTGACAGGAGCAAAAATTGGTGATCTATCTGTAACAATTACTCTGGTTGAGAATTATCATCTTCCACCTGAAGCAATGTCATCAATCCTGGATAAGAGGCAAACTGTTTCCGGGATTGCTCCGAATCAGGCTGAAGATGTCGTAAGTACAATGCTTGCCAAGGGCTTCATCTTAGGGAAGGATGCCCTCAACAAGGCAAAAGCATTCGACGAACGACACCAGTTGACGTCGAATGCTTCTGCGACCGTCGCTTCCATTGACCGCAAGATGGGCATAACCGAGAAAATAACTGCAGGCACAGCAGTAGTAAATGAAAAGGTCAGGGAGATGGATGAAATGTTCCAGGTTTCTGAGAAGACGAAATCCGCCCTCGCAGTTGCCGAGCAGAAGGCAAGCAGTGCTGGAACCGCGCTCATGAGTAACTATTATGTGTTAACTGGAGCAGCATGGTTTTCAAATGCTGTAACTGCAGTTACAAAAGCTGCTGAGGAAGTGACCCAGATGACCAAGGCAAAAGTCGAGAAAGCCGAGGAGGAGAAAAAGGAGAGCATATACCGTGAAAGAACCGGGATCATCAATAATTTCGCCGAGCTCCATCTCGACGAGCCTTTACCGGGAGAGCCTGCTATCGTTCCAGTTAATTCAGCCGATAGATAA

Protein sequence

MSMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAPNQAEDVVSTMLAKGFILGKDALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKSALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR

Homology

[Close]

BLAST of Lcy13g011050 vs. ExPASy Swiss-Prot
Match: Q9LFD5 (Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.4e-57
Identity = 130/260 (50.00%), Postives = 181/260 (69.62%), Query Frame = 0


Query: 3   MRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLT 62
           +R+VKV N+S   +E DIKEFFSFSGE+  +++Q    N   AYVT+K++QGA+TA+LL+
Sbjct: 5   VRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQ---SNEHSAYVTFKETQGAETAVLLS 64

Query: 63  GAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAPNQAEDVVSTMLAKGFILGKDA 122
           GA I D SV I L  NY  PP A  +  + + + +     +AEDVVS+MLAKGFILGKDA
Sbjct: 65  GASIADQSVIIELAPNYS-PPAAPHA--ETQSSGAESVVQKAEDVVSSMLAKGFILGKDA 124

Query: 123 LNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKS 182
           + KAKAFDE+H  TS A+A VAS+D+K+G+++K+TAGT++VNEK++ +D+ FQV+E+TKS
Sbjct: 125 VGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAVDQNFQVTERTKS 184

Query: 183 ALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKE 242
             A AEQ  SSAG+A+M N YVLTG +W + A   V +AA EV Q TK   EK E E+  
Sbjct: 185 VYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQKTK---EKVEAEQPS 244

Query: 243 SIYRERTGIINNFAELHLDE 263
              + +  +   ++ +H  E
Sbjct: 245 QPAQSQQQLPEGYSPIHSSE 255

[Close]

BLAST of Lcy13g011050 vs. ExPASy Swiss-Prot
Match: P87216 (Protein vip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=vip1 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 8.8e-07
Identity = 56/207 (27.05%), Postives = 96/207 (46.38%), Query Frame = 0


Query: 6   VKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAK 65
           V V+NIS   +E+ I +FFSF G++  +  ++  E TQ A + ++      TA+LL  A 
Sbjct: 5   VIVTNISPEVTEKQISDFFSFCGKVSNISTEKSGE-TQTAKIQFERPSATKTALLLQDAL 64

Query: 66  IGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAPNQAED----VVSTMLAKGFILGKD 125
           +G   + IT  +         +S  D+       A  Q +     ++S +L++G+ L   
Sbjct: 65  LGQNKIQITSEDG------GAASTTDQGGAGGDQAARQEDKPRSAIISELLSRGYHLSDV 124

Query: 126 ALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVN------EKVREMDEMFQ 185
            L K+   D+ + ++S          +  GI E   +G   VN      EK  E+D  F 
Sbjct: 125 TLEKSIQLDQSYGVSS----------KFKGILESALSGVRSVNERYHVTEKANEVDNKFA 184

Query: 186 VSEK---TKSALAVAEQKA--SSAGTA 198
           +S+K   T S ++    KA  ++AGT+
Sbjct: 185 ISDKLNRTSSLVSTYFHKALETAAGTS 194

[Close]

BLAST of Lcy13g011050 vs. ExPASy TrEMBL
Match: A0A6J1FSI4 (binding partner of ACD11 1-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111446898 PE=4 SV=1)

HSP 1 Score: 501.9 bits (1291), Expect = 1.7e-138
Identity = 270/278 (97.12%), Postives = 273/278 (98.20%), Query Frame = 0


Query: 1   MSMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL 60
           MSMRTVKVSNISKATSERDI+EFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL
Sbjct: 1   MSMRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL 60

Query: 61  LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAPNQAEDVVSTMLAKGFILGK 120
           LTGAKIGDLSVTI LVENYHLPPEAMSSILDKRQTV+G APNQAEDVVSTMLAKGFILGK
Sbjct: 61  LTGAKIGDLSVTIALVENYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGK 120

Query: 121 DALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKT 180
           DA+NKAKAFDERHQLTSNASATV SIDRKMGITEKITAGTAVVNEKVREMDE FQVSEKT
Sbjct: 121 DAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQVSEKT 180

Query: 181 KSALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEK 240
           KSALAVAEQKASSAGTALMSNYYV TGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEK
Sbjct: 181 KSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEK 240

Query: 241 KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 279
           KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR
Sbjct: 241 KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 278

[Close]

BLAST of Lcy13g011050 vs. ExPASy TrEMBL
Match: A0A0A0KIR7 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G023900 PE=4 SV=1)

HSP 1 Score: 500.4 bits (1287), Expect = 5.0e-138
Identity = 270/278 (97.12%), Postives = 274/278 (98.56%), Query Frame = 0


Query: 1   MSMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL 60
           MSMRTVKVSNISK TSERDIKEFFSFSGEILYVEMQRE+ENTQVAYVTYKDSQGADTAIL
Sbjct: 1   MSMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAIL 60

Query: 61  LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAPNQAEDVVSTMLAKGFILGK 120
           LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTV+GIAPNQAEDVVSTMLAKGFILGK
Sbjct: 61  LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPNQAEDVVSTMLAKGFILGK 120

Query: 121 DALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKT 180
           DALNKAKAFDER QLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQV EKT
Sbjct: 121 DALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKT 180

Query: 181 KSALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEK 240
           KSALAVAEQKA+SAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTK KVEKAEEEK
Sbjct: 181 KSALAVAEQKATSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEK 240

Query: 241 KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 279
           KESIYRERTGII+NFAELHLDEPLPGEPAIVPVNSADR
Sbjct: 241 KESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR 278

[Close]

BLAST of Lcy13g011050 vs. ExPASy TrEMBL
Match: A0A6J1K671 (binding partner of ACD11 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491510 PE=4 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 8.5e-138
Identity = 269/278 (96.76%), Postives = 272/278 (97.84%), Query Frame = 0


Query: 1   MSMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL 60
           MSMRTVKVSNISKATSERDI+EFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL
Sbjct: 1   MSMRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL 60

Query: 61  LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAPNQAEDVVSTMLAKGFILGK 120
           LTGAKIGDLSVTI LVENYHLPPEAMSSILDKRQTV+G APNQAEDVVSTMLAKGFILGK
Sbjct: 61  LTGAKIGDLSVTIALVENYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGK 120

Query: 121 DALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKT 180
           DA+NKAKAFDERHQLTSNASATV SIDRKMGI EKITAGTAVVNEKVREMDE FQVSEKT
Sbjct: 121 DAVNKAKAFDERHQLTSNASATVTSIDRKMGIMEKITAGTAVVNEKVREMDEKFQVSEKT 180

Query: 181 KSALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEK 240
           KSALAVAEQKASSAGTALMSNYYV TGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEK
Sbjct: 181 KSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEK 240

Query: 241 KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 279
           KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR
Sbjct: 241 KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 278

[Close]

BLAST of Lcy13g011050 vs. ExPASy TrEMBL
Match: A0A1S3BUX7 (binding partner of ACD11 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493460 PE=4 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 8.5e-138
Identity = 269/278 (96.76%), Postives = 274/278 (98.56%), Query Frame = 0


Query: 1   MSMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL 60
           MSMRTVKVSNISK TSERDIKEFFSFSGEILYVEMQRE+ENTQVAYVTYKDSQGADTAIL
Sbjct: 1   MSMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAIL 60

Query: 61  LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAPNQAEDVVSTMLAKGFILGK 120
           LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTV+GIAPNQAEDVVSTMLAKGFILGK
Sbjct: 61  LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPNQAEDVVSTMLAKGFILGK 120

Query: 121 DALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKT 180
           DALNKAKAFDER Q TSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQV+EKT
Sbjct: 121 DALNKAKAFDERLQFTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKT 180

Query: 181 KSALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEK 240
           KSALAVAEQKA+SAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTK KVEKAEEEK
Sbjct: 181 KSALAVAEQKATSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEK 240

Query: 241 KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 279
           KESIYRERTGII+NFAELHLDEPLPGEPAIVPVNSADR
Sbjct: 241 KESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR 278

[Close]

BLAST of Lcy13g011050 vs. ExPASy TrEMBL
Match: A0A6J1FLI4 (binding partner of ACD11 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446898 PE=4 SV=1)

HSP 1 Score: 498.4 bits (1282), Expect = 1.9e-137
Identity = 268/276 (97.10%), Postives = 271/276 (98.19%), Query Frame = 0


Query: 3   MRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLT 62
           MRTVKVSNISKATSERDI+EFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLT
Sbjct: 52  MRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLT 111

Query: 63  GAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAPNQAEDVVSTMLAKGFILGKDA 122
           GAKIGDLSVTI LVENYHLPPEAMSSILDKRQTV+G APNQAEDVVSTMLAKGFILGKDA
Sbjct: 112 GAKIGDLSVTIALVENYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGKDA 171

Query: 123 LNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKS 182
           +NKAKAFDERHQLTSNASATV SIDRKMGITEKITAGTAVVNEKVREMDE FQVSEKTKS
Sbjct: 172 VNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQVSEKTKS 231

Query: 183 ALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKE 242
           ALAVAEQKASSAGTALMSNYYV TGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKE
Sbjct: 232 ALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKE 291

Query: 243 SIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 279
           SIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR
Sbjct: 292 SIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 327

[Close]

BLAST of Lcy13g011050 vs. NCBI nr
Match: XP_038891484.1 (binding partner of ACD11 1 [Benincasa hispida])

HSP 1 Score: 502.7 bits (1293), Expect = 2.1e-138
Identity = 271/278 (97.48%), Postives = 274/278 (98.56%), Query Frame = 0


Query: 1   MSMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL 60
           MSMRTVKVSNISK TSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL
Sbjct: 1   MSMRTVKVSNISKVTSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL 60

Query: 61  LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAPNQAEDVVSTMLAKGFILGK 120
           LTGAKIGDLSVTITLVENYHLPPEAMSSILDK+QTV GIAPNQAEDVVSTMLAKGFILGK
Sbjct: 61  LTGAKIGDLSVTITLVENYHLPPEAMSSILDKKQTVIGIAPNQAEDVVSTMLAKGFILGK 120

Query: 121 DALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKT 180
           DALNKAKAFDER QLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQV+EKT
Sbjct: 121 DALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKT 180

Query: 181 KSALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEK 240
           KSALAVAEQKA+SAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTK KVEKAEEEK
Sbjct: 181 KSALAVAEQKATSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEK 240

Query: 241 KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 279
           KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR
Sbjct: 241 KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 278

[Close]

BLAST of Lcy13g011050 vs. NCBI nr
Match: XP_022941588.1 (binding partner of ACD11 1-like isoform X3 [Cucurbita moschata] >KAG7030609.1 Binding partner of ACD11 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 501.9 bits (1291), Expect = 3.5e-138
Identity = 270/278 (97.12%), Postives = 273/278 (98.20%), Query Frame = 0


Query: 1   MSMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL 60
           MSMRTVKVSNISKATSERDI+EFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL
Sbjct: 1   MSMRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL 60

Query: 61  LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAPNQAEDVVSTMLAKGFILGK 120
           LTGAKIGDLSVTI LVENYHLPPEAMSSILDKRQTV+G APNQAEDVVSTMLAKGFILGK
Sbjct: 61  LTGAKIGDLSVTIALVENYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGK 120

Query: 121 DALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKT 180
           DA+NKAKAFDERHQLTSNASATV SIDRKMGITEKITAGTAVVNEKVREMDE FQVSEKT
Sbjct: 121 DAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQVSEKT 180

Query: 181 KSALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEK 240
           KSALAVAEQKASSAGTALMSNYYV TGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEK
Sbjct: 181 KSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEK 240

Query: 241 KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 279
           KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR
Sbjct: 241 KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 278

[Close]

BLAST of Lcy13g011050 vs. NCBI nr
Match: KAG6599926.1 (Binding partner of ACD11 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 500.4 bits (1287), Expect = 1.0e-137
Identity = 269/278 (96.76%), Postives = 272/278 (97.84%), Query Frame = 0


Query: 1   MSMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL 60
           M MRTVKVSNISKATSERDI+EFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL
Sbjct: 1   MQMRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL 60

Query: 61  LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAPNQAEDVVSTMLAKGFILGK 120
           LTGAKIGDLSVTI LVENYHLPPEAMSSILDKRQTV+G APNQAEDVVSTMLAKGFILGK
Sbjct: 61  LTGAKIGDLSVTIALVENYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGK 120

Query: 121 DALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKT 180
           DA+NKAKAFDERHQLTSNASATV SIDRKMGITEKITAGTAVVNEKVREMDE FQVSEKT
Sbjct: 121 DAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQVSEKT 180

Query: 181 KSALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEK 240
           KSALAVAEQKASSAGTALMSNYYV TGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEK
Sbjct: 181 KSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEK 240

Query: 241 KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 279
           KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR
Sbjct: 241 KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 278

[Close]

BLAST of Lcy13g011050 vs. NCBI nr
Match: XP_004142266.1 (binding partner of ACD11 1 [Cucumis sativus] >KGN49610.1 hypothetical protein Csa_018454 [Cucumis sativus])

HSP 1 Score: 500.4 bits (1287), Expect = 1.0e-137
Identity = 270/278 (97.12%), Postives = 274/278 (98.56%), Query Frame = 0


Query: 1   MSMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL 60
           MSMRTVKVSNISK TSERDIKEFFSFSGEILYVEMQRE+ENTQVAYVTYKDSQGADTAIL
Sbjct: 1   MSMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAIL 60

Query: 61  LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAPNQAEDVVSTMLAKGFILGK 120
           LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTV+GIAPNQAEDVVSTMLAKGFILGK
Sbjct: 61  LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPNQAEDVVSTMLAKGFILGK 120

Query: 121 DALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKT 180
           DALNKAKAFDER QLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQV EKT
Sbjct: 121 DALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKT 180

Query: 181 KSALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEK 240
           KSALAVAEQKA+SAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTK KVEKAEEEK
Sbjct: 181 KSALAVAEQKATSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEK 240

Query: 241 KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 279
           KESIYRERTGII+NFAELHLDEPLPGEPAIVPVNSADR
Sbjct: 241 KESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR 278

[Close]

BLAST of Lcy13g011050 vs. NCBI nr
Match: XP_008452423.1 (PREDICTED: binding partner of ACD11 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 499.6 bits (1285), Expect = 1.8e-137
Identity = 269/278 (96.76%), Postives = 274/278 (98.56%), Query Frame = 0


Query: 1   MSMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL 60
           MSMRTVKVSNISK TSERDIKEFFSFSGEILYVEMQRE+ENTQVAYVTYKDSQGADTAIL
Sbjct: 1   MSMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAIL 60

Query: 61  LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAPNQAEDVVSTMLAKGFILGK 120
           LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTV+GIAPNQAEDVVSTMLAKGFILGK
Sbjct: 61  LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPNQAEDVVSTMLAKGFILGK 120

Query: 121 DALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKT 180
           DALNKAKAFDER Q TSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQV+EKT
Sbjct: 121 DALNKAKAFDERLQFTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKT 180

Query: 181 KSALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEK 240
           KSALAVAEQKA+SAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTK KVEKAEEEK
Sbjct: 181 KSALAVAEQKATSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEK 240

Query: 241 KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 279
           KESIYRERTGII+NFAELHLDEPLPGEPAIVPVNSADR
Sbjct: 241 KESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR 278

[Close]

BLAST of Lcy13g011050 vs. TAIR 10
Match: AT4G17720.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 273.1 bits (697), Expect = 2.5e-73
Identity = 154/266 (57.89%), Postives = 195/266 (73.31%), Query Frame = 0


Query: 1   MSMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL 60
           M+M TVKVSN+S   ++RD+KEFFSFSG+ILY+E Q ETE T++AYVT+KD QGA+TA+L
Sbjct: 1   MTMTTVKVSNVSLGATDRDLKEFFSFSGDILYLETQSETERTKLAYVTFKDLQGAETAVL 60

Query: 61  LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAPN----QAEDVVSTMLAKGF 120
           L+GA I D SV +++  +Y L PEA++S+  K    S  A +    +AEDVVS+MLAKGF
Sbjct: 61  LSGATIVDSSVIVSMAPDYQLSPEALASLEPKDSNKSPKAGDSVLRKAEDVVSSMLAKGF 120

Query: 121 ILGKDALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQV 180
           ILGKDA+ KAK+ DE+HQLTS ASA VAS D+K+G T+KI  GT VV EKVRE+D+ +QV
Sbjct: 121 ILGKDAIAKAKSVDEKHQLTSTASAKVASFDKKIGFTDKINTGTVVVGEKVREVDQKYQV 180

Query: 181 SEKTKSALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKA 240
           SEKTKSA+A AEQ  S+AG+A+M N YVLTGA W + A   V KAAEEV Q  K KV  A
Sbjct: 181 SEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNKVAKAAEEVGQKAKEKVGMA 240

Query: 241 EEEKKESIYRERTGIINNFAELHLDE 263
           EEE K         +++ FA +HL E
Sbjct: 241 EEEDKRK-------VVDEFARVHLSE 259

[Close]

BLAST of Lcy13g011050 vs. TAIR 10
Match: AT1G67950.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 265.8 bits (678), Expect = 4.0e-71
Identity = 152/271 (56.09%), Postives = 196/271 (72.32%), Query Frame = 0


Query: 3   MRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLT 62
           ++TVK+SN+S   S++D+KEFFSFSG+I YVEM+ ET+ +QVAYVT+KDSQGA+TA+LLT
Sbjct: 28  VKTVKISNVSLIVSKKDVKEFFSFSGDIQYVEMRSETQESQVAYVTFKDSQGAETAMLLT 87

Query: 63  GAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAPNQAEDVVSTMLAKGFILGKDA 122
           GA I DL V+IT   NY LPPEA++  LD   + +G +  +AEDVV+ M+ +G+ LGKDA
Sbjct: 88  GAVIADLRVSITPAVNYQLPPEALA--LDSEHSFNGFSVKKAEDVVNIMVGRGYALGKDA 147

Query: 123 LNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKS 182
           + KAKAFD+RH L SNASAT+AS+D KMG++EK++ GT VVNEK+R++DE +QV E TKS
Sbjct: 148 MEKAKAFDDRHNLISNASATIASLDDKMGLSEKLSIGTTVVNEKLRDIDERYQVREITKS 207

Query: 183 ALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKE 242
           ALA AE+ A SA TALM+N YV +GA+WFSNA  AVTKA +E       KVE   E +KE
Sbjct: 208 ALAAAEETAISARTALMANPYVSSGASWFSNAFGAVTKAVKE-------KVENGGEGRKE 267

Query: 243 SIYRERTGIINNFAELHLDEPLPGEPAIVPV 274
            I               LD   P  PA+VPV
Sbjct: 268 II--------------TLDPSSPKVPAVVPV 275

[Close]

BLAST of Lcy13g011050 vs. TAIR 10
Match: AT1G67950.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 265.8 bits (678), Expect = 4.0e-71
Identity = 152/271 (56.09%), Postives = 196/271 (72.32%), Query Frame = 0


Query: 3   MRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLT 62
           ++TVK+SN+S   S++D+KEFFSFSG+I YVEM+ ET+ +QVAYVT+KDSQGA+TA+LLT
Sbjct: 29  VKTVKISNVSLIVSKKDVKEFFSFSGDIQYVEMRSETQESQVAYVTFKDSQGAETAMLLT 88

Query: 63  GAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAPNQAEDVVSTMLAKGFILGKDA 122
           GA I DL V+IT   NY LPPEA++  LD   + +G +  +AEDVV+ M+ +G+ LGKDA
Sbjct: 89  GAVIADLRVSITPAVNYQLPPEALA--LDSEHSFNGFSVKKAEDVVNIMVGRGYALGKDA 148

Query: 123 LNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKS 182
           + KAKAFD+RH L SNASAT+AS+D KMG++EK++ GT VVNEK+R++DE +QV E TKS
Sbjct: 149 MEKAKAFDDRHNLISNASATIASLDDKMGLSEKLSIGTTVVNEKLRDIDERYQVREITKS 208

Query: 183 ALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKE 242
           ALA AE+ A SA TALM+N YV +GA+WFSNA  AVTKA +E       KVE   E +KE
Sbjct: 209 ALAAAEETAISARTALMANPYVSSGASWFSNAFGAVTKAVKE-------KVENGGEGRKE 268

Query: 243 SIYRERTGIINNFAELHLDEPLPGEPAIVPV 274
            I               LD   P  PA+VPV
Sbjct: 269 II--------------TLDPSSPKVPAVVPV 276

[Close]

BLAST of Lcy13g011050 vs. TAIR 10
Match: AT5G46870.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 265.8 bits (678), Expect = 4.0e-71
Identity = 147/270 (54.44%), Postives = 198/270 (73.33%), Query Frame = 0


Query: 1   MSMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL 60
           MSM TVKVSN+S   +ERD+KEFFSFSG+I Y+E Q E + +++AYVT+KD QGA+TA+L
Sbjct: 1   MSMVTVKVSNVSLEATERDLKEFFSFSGDIAYLETQSENDGSKLAYVTFKDLQGAETAVL 60

Query: 61  LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAP--------NQAEDVVSTML 120
           LTG+ I D SVT+T+  +Y LPP+A++SI   +++    +P         +AEDVVS M+
Sbjct: 61  LTGSTIVDSSVTVTMSPDYQLPPDALASIESLKESNKSSSPTREDVSVFRKAEDVVSGMI 120

Query: 121 AKGFILGKDALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDE 180
           +KGF+LGKDA+ KAK+ DE+HQLTS ASA V S D+++G TEKI  GT VV+EKV+E+D+
Sbjct: 121 SKGFVLGKDAIAKAKSLDEKHQLTSTASARVTSFDKRIGFTEKINTGTTVVSEKVKEVDQ 180

Query: 181 MFQVSEKTKSALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAK 240
            FQV+EKTKSA+A AEQ  S+AG+A+M N YVLTGA W + A   V+KAAEEV Q  K K
Sbjct: 181 KFQVTEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNRVSKAAEEVGQKAKEK 240

Query: 241 VEKAEEEKKESIYRERTGIINNFAELHLDE 263
           V  AEEE++     E+  +++  A +HL E
Sbjct: 241 VGLAEEEEE-----EKKKVVDEVAIVHLTE 265

[Close]

BLAST of Lcy13g011050 vs. TAIR 10
Match: AT1G67950.3 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 262.3 bits (669), Expect = 4.4e-70
Identity = 152/272 (55.88%), Postives = 198/272 (72.79%), Query Frame = 0


Query: 3   MRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLT 62
           ++TVK+SN+S   S++D+KEFFSFSG+I YVEM+ ET+ +QVAYVT+KDSQGA+TA+LLT
Sbjct: 28  VKTVKISNVSLIVSKKDVKEFFSFSGDIQYVEMRSETQESQVAYVTFKDSQGAETAMLLT 87

Query: 63  GAKIGDLSVTITLVENYHLPPEAMSSILDKRQ-TVSGIAPNQAEDVVSTMLAKGFILGKD 122
           GA I DL V+IT   NY LPPEA++  LD ++ + +G +  +AEDVV+ M+ +G+ LGKD
Sbjct: 88  GAVIADLRVSITPAVNYQLPPEALA--LDSQEHSFNGFSVKKAEDVVNIMVGRGYALGKD 147

Query: 123 ALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTK 182
           A+ KAKAFD+RH L SNASAT+AS+D KMG++EK++ GT VVNEK+R++DE +QV E TK
Sbjct: 148 AMEKAKAFDDRHNLISNASATIASLDDKMGLSEKLSIGTTVVNEKLRDIDERYQVREITK 207

Query: 183 SALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKK 242
           SALA AE+ A SA TALM+N YV +GA+WFSNA  AVTKA +E       KVE   E +K
Sbjct: 208 SALAAAEETAISARTALMANPYVSSGASWFSNAFGAVTKAVKE-------KVENGGEGRK 267

Query: 243 ESIYRERTGIINNFAELHLDEPLPGEPAIVPV 274
           E I               LD   P  PA+VPV
Sbjct: 268 EII--------------TLDPSSPKVPAVVPV 276

The following BLAST results are available for this feature:

BLAST of Lcy13g011050 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFD5	1.4e-57	50.00	Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1	[more]
P87216	8.8e-07	27.05	Protein vip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN...	[more]

BLAST of Lcy13g011050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FSI4	1.7e-138	97.12	binding partner of ACD11 1-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A0A0KIR7	5.0e-138	97.12	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G023900 PE=4 SV...	[more]
A0A6J1K671	8.5e-138	96.76	binding partner of ACD11 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A1S3BUX7	8.5e-138	96.76	binding partner of ACD11 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034934...	[more]
A0A6J1FLI4	1.9e-137	97.10	binding partner of ACD11 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]

BLAST of Lcy13g011050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891484.1	2.1e-138	97.48	binding partner of ACD11 1 [Benincasa hispida]	[more]
XP_022941588.1	3.5e-138	97.12	binding partner of ACD11 1-like isoform X3 [Cucurbita moschata] >KAG7030609.1 Bi...	[more]
KAG6599926.1	1.0e-137	96.76	Binding partner of ACD11 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_004142266.1	1.0e-137	97.12	binding partner of ACD11 1 [Cucumis sativus] >KGN49610.1 hypothetical protein Cs...	[more]
XP_008452423.1	1.8e-137	96.76	PREDICTED: binding partner of ACD11 1-like isoform X1 [Cucumis melo]	[more]

BLAST of Lcy13g011050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17720.1	2.5e-73	57.89	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G67950.1	4.0e-71	56.09	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G67950.2	4.0e-71	56.09	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G46870.1	4.0e-71	54.44	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G67950.3	4.4e-70	55.88	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 219..239
None	No IPR available	PANTHER	PTHR32343:SF29	RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN	coord: 2..277
None	No IPR available	PANTHER	PTHR32343	SERINE/ARGININE-RICH SPLICING FACTOR	coord: 2..277
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 5..74 e-value: 4.3E-9 score: 46.2
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 7..68 e-value: 3.1E-8 score: 33.3
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 4..78 score: 11.622288
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 2..74 e-value: 2.9E-12 score: 48.3
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 3..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy13g011050.1	Lcy13g011050.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding