Lcy13g010240 (gene) Sponge gourd (P93075) v1

Overview
NameLcy13g010240
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
LocationChr13: 10840313 .. 10841143 (-)
RNA-Seq ExpressionLcy13g010240
SyntenyLcy13g010240
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTAGGCTAGGTAAGTGGAGTAGAGATCAATATGAAGGATCCATTAAAGGGGCTATTGCAAGGAAAGAAAGAGAGATACAAAATCTTTTGTCTAATGGTAGTCAGCAAGATGGTTTGGAGCTGAGTACTAAACAGAGGGAGTTGGAGAATCTCCTGGAGGATGATGAGATCTATTGGAAACAGCGCGCTCGAGAGGATTGGCTGCAATGGGGAGACGGCAATAATAAGTGGTTCCACATGAAAGCTAGCACTAGGAGAAAGGTAAACAAAATTCAAGGTTTATTTGACTCAAATGGGGTGTGGCAGGAAAGGGATGAAGATATGGAGATAGTGGCTAACCATTATTTTCAGGACTTGTTTCTTTCTACCGATCCTCAGGTTGAGGCTATGTCCCAAATCTTGGATGTGACTCCAATATGTATCTCTGACGAGCAGAACCAAAAGCTAACAGCGCCGTTTACTAGAGACAAGATCTATGATATTGTTAAGAAGATGCATCCGACGAAAGCTCCTGGCCCAGATGGAATACAAGCTATTTTCTATCAGAAGTACTGGGATGTGGTAGGAACAGATGTGTGTGATTTATGCCTTGGTGTTCTGAATGAAGGAGGAGGGTTGGAAAACATTAATAAAACCTTCATTGCGCTAATTCCTAAGGTGTTGGATCCCAAATCTATGAAGGATTTCCGTCCTATCAGTCTTTGCTCGGTGCTTTATAAAATTATCTCTAAGCCTTTAGCTAATAGATTGAAAGGGGTTTTGAATAACATCATATCTCCTAGCCAATCCGCCTTTATCCCGGGGAGACTGATCACTGATAATGTATAA

mRNA sequence

ATGAGTAGGCTAGGTAAGTGGAGTAGAGATCAATATGAAGGATCCATTAAAGGGGCTATTGCAAGGAAAGAAAGAGAGATACAAAATCTTTTGTCTAATGGTAGTCAGCAAGATGGTTTGGAGCTGAGTACTAAACAGAGGGAGTTGGAGAATCTCCTGGAGGATGATGAGATCTATTGGAAACAGCGCGCTCGAGAGGATTGGCTGCAATGGGGAGACGGCAATAATAAGTGGTTCCACATGAAAGCTAGCACTAGGAGAAAGGTAAACAAAATTCAAGGTTTATTTGACTCAAATGGGGTGTGGCAGGAAAGGGATGAAGATATGGAGATAGTGGCTAACCATTATTTTCAGGACTTGTTTCTTTCTACCGATCCTCAGGTTGAGGCTATGTCCCAAATCTTGGATGTGACTCCAATATGTATCTCTGACGAGCAGAACCAAAAGCTAACAGCGCCGTTTACTAGAGACAAGATCTATGATATTGTTAAGAAGATGCATCCGACGAAAGCTCCTGGCCCAGATGGAATACAAGCTATTTTCTATCAGAAGTACTGGGATGTGGTAGGAACAGATGTGTGTGATTTATGCCTTGGTGTTCTGAATGAAGGAGGAGGGTTGGAAAACATTAATAAAACCTTCATTGCGCTAATTCCTAAGGTGTTGGATCCCAAATCTATGAAGGATTTCCGTCCTATCAGTCTTTGCTCGGTGCTTTATAAAATTATCTCTAAGCCTTTAGCTAATAGATTGAAAGGGGTTTTGAATAACATCATATCTCCTAGCCAATCCGCCTTTATCCCGGGGAGACTGATCACTGATAATGTATAA

Coding sequence (CDS)

ATGAGTAGGCTAGGTAAGTGGAGTAGAGATCAATATGAAGGATCCATTAAAGGGGCTATTGCAAGGAAAGAAAGAGAGATACAAAATCTTTTGTCTAATGGTAGTCAGCAAGATGGTTTGGAGCTGAGTACTAAACAGAGGGAGTTGGAGAATCTCCTGGAGGATGATGAGATCTATTGGAAACAGCGCGCTCGAGAGGATTGGCTGCAATGGGGAGACGGCAATAATAAGTGGTTCCACATGAAAGCTAGCACTAGGAGAAAGGTAAACAAAATTCAAGGTTTATTTGACTCAAATGGGGTGTGGCAGGAAAGGGATGAAGATATGGAGATAGTGGCTAACCATTATTTTCAGGACTTGTTTCTTTCTACCGATCCTCAGGTTGAGGCTATGTCCCAAATCTTGGATGTGACTCCAATATGTATCTCTGACGAGCAGAACCAAAAGCTAACAGCGCCGTTTACTAGAGACAAGATCTATGATATTGTTAAGAAGATGCATCCGACGAAAGCTCCTGGCCCAGATGGAATACAAGCTATTTTCTATCAGAAGTACTGGGATGTGGTAGGAACAGATGTGTGTGATTTATGCCTTGGTGTTCTGAATGAAGGAGGAGGGTTGGAAAACATTAATAAAACCTTCATTGCGCTAATTCCTAAGGTGTTGGATCCCAAATCTATGAAGGATTTCCGTCCTATCAGTCTTTGCTCGGTGCTTTATAAAATTATCTCTAAGCCTTTAGCTAATAGATTGAAAGGGGTTTTGAATAACATCATATCTCCTAGCCAATCCGCCTTTATCCCGGGGAGACTGATCACTGATAATGTATAA

Protein sequence

MSRLGKWSRDQYEGSIKGAIARKEREIQNLLSNGSQQDGLELSTKQRELENLLEDDEIYWKQRAREDWLQWGDGNNKWFHMKASTRRKVNKIQGLFDSNGVWQERDEDMEIVANHYFQDLFLSTDPQVEAMSQILDVTPICISDEQNQKLTAPFTRDKIYDIVKKMHPTKAPGPDGIQAIFYQKYWDVVGTDVCDLCLGVLNEGGGLENINKTFIALIPKVLDPKSMKDFRPISLCSVLYKIISKPLANRLKGVLNNIISPSQSAFIPGRLITDNV
Homology
BLAST of Lcy13g010240 vs. ExPASy Swiss-Prot
Match: P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.3e-23
Identity = 72/246 (29.27%), Postives = 127/246 (51.63%), Query Frame = 0

Query: 33  NGSQQDGLELSTKQRE--LENLLEDDEIYWKQRAREDWLQWGDGNNKWFHMKASTRRKVN 92
           +GS+   L+    +R+  L N+ +        R+R   L   D  +++F+     +    
Sbjct: 327 SGSEDQALQCEYLERKEALRNMEQRQARGAFVRSRMQLLCDMDRGSRFFYALEKKKGNRK 386

Query: 93  KIQGLFDSNGVWQERDEDMEIVANHYFQDLFLSTDPQVEAMSQILDVTPICISDEQNQKL 152
           +I  LF  +G   E  E +   A  ++Q+LF       +A  ++ D  P+ +S+ + ++L
Sbjct: 387 QITCLFAEDGTPLEDPEAIRDRARSFYQNLFSPDPISPDACEELWDGLPV-VSERRKERL 446

Query: 153 TAPFTRDKIYDIVKKMHPTKAPGPDGIQAIFYQKYWDVVGTDVCDLCLGVLNEGGGLENI 212
             P T D++   ++ M   K+PG DG+   F+Q +WD +G D   +      +G    + 
Sbjct: 447 ETPITLDELSQALRLMPHNKSPGLDGLTIEFFQFFWDTLGPDFHRVLTEAFKKGELPLSC 506

Query: 213 NKTFIALIPKVLDPKSMKDFRPISLCSVLYKIISKPLANRLKGVLNNIISPSQSAFIPGR 272
            +  ++L+PK  D + +K++RP+SL S  YKI++K ++ RLK VL  +I P QS  +PGR
Sbjct: 507 RRAVLSLLPKKGDLRLIKNWRPVSLLSTDYKIVAKAISLRLKSVLAEVIHPDQSYTVPGR 566

Query: 273 LITDNV 277
            I DNV
Sbjct: 567 TIFDNV 571

BLAST of Lcy13g010240 vs. ExPASy Swiss-Prot
Match: O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 3.5e-16
Identity = 56/186 (30.11%), Postives = 94/186 (50.54%), Query Frame = 0

Query: 86  RRKVNKIQGLFDSNGVWQERDEDMEIVANHYFQDLFLSTDPQVEAMSQILDV-TPICISD 145
           +R+ N+I  + +  G       +++     Y++ L+ +    +E M   LD  T   ++ 
Sbjct: 384 KREKNQIDTIKNDKGDITTDPTEIQTTIREYYKHLYANKLENLEEMDTFLDTYTLPRLNQ 443

Query: 146 EQNQKLTAPFTRDKIYDIVKKMHPTKAPGPDGIQAIFYQKYWDVVGTDVCDLCLGVLNEG 205
           E+ + L  P T  +I  I+  +   K+PGPDG  A FYQ+Y + +   +  L   +  EG
Sbjct: 444 EEVESLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEKEG 503

Query: 206 GGLENINKTFIALIPKV-LDPKSMKDFRPISLCSVLYKIISKPLANRLKGVLNNIISPSQ 265
               +  +  I LIPK   D    ++FRPISL ++  KI++K LANR++  +  +I   Q
Sbjct: 504 ILPNSFYEASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQ 563

Query: 266 SAFIPG 270
             FIPG
Sbjct: 564 VGFIPG 569

BLAST of Lcy13g010240 vs. ExPASy Swiss-Prot
Match: P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)

HSP 1 Score: 80.5 bits (197), Expect = 3.3e-14
Identity = 54/183 (29.51%), Postives = 96/183 (52.46%), Query Frame = 0

Query: 89  VNKIQGLFDSNGVWQERDEDMEIVANHYFQDLFLSTDPQVEAMSQILDVTPI-CISDEQN 148
           +NKI+   +  G      E+++     +++ L+ +    ++ M + LD   +  ++ +Q 
Sbjct: 397 INKIR---NEKGDITTDPEEIQNTIRSFYKRLYSTKLENLDEMDKFLDRYQVPKLNQDQV 456

Query: 149 QKLTAPFTRDKIYDIVKKMHPTKAPGPDGIQAIFYQKYWDVVGTDVCDLCLGVLNEGGGL 208
             L +P +  +I  ++  +   K+PGPDG  A FYQ + + +   +  L   +  EG   
Sbjct: 457 DHLNSPISPKEIEAVINSLPTKKSPGPDGFSAEFYQTFKEDLIPILHKLFHKIEVEGTLP 516

Query: 209 ENINKTFIALIPK-VLDPKSMKDFRPISLCSVLYKIISKPLANRLKGVLNNIISPSQSAF 268
            +  +  I LIPK   DP  +++FRPISL ++  KI++K LANR++  +  II P Q  F
Sbjct: 517 NSFYEATITLIPKPQKDPTKIENFRPISLMNIDAKILNKILANRIQEHIKAIIHPDQVGF 576

Query: 269 IPG 270
           IPG
Sbjct: 577 IPG 576

BLAST of Lcy13g010240 vs. ExPASy Swiss-Prot
Match: P16423 (Retrovirus-related Pol polyprotein from type-2 retrotransposable element R2DM OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 5.3e-04
Identity = 34/107 (31.78%), Postives = 50/107 (46.73%), Query Frame = 0

Query: 169 TKAPGPDGIQAIFYQKYWDVVGTDVCDLCLGVLNEGGGLENINKTFIALIPKVLDPKSMK 228
           + +PGPDGI     ++    +   + +L L     G    +I       IPK +  K  +
Sbjct: 357 SSSPGPDGITPKSAREVPSGIMLRIMNLILWC---GNLPHSIRLARTVFIPKTVTAKRPQ 416

Query: 229 DFRPISLCSVLYKIISKPLANRLKGVLNNIISPSQSAFIPGRLITDN 276
           DFRPIS+ SVL + ++  LA RL   +N    P Q  F+P     DN
Sbjct: 417 DFRPISVPSVLVRQLNAILATRLNSSIN--WDPRQRGFLPTDGCADN 458

BLAST of Lcy13g010240 vs. ExPASy TrEMBL
Match: A0A2N9GPZ7 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29430 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 1.5e-65
Identity = 128/270 (47.41%), Postives = 184/270 (68.15%), Query Frame = 0

Query: 7   WSRDQYEGSIKGAIARKEREIQNLLSNGSQQDGLELSTKQRELENLLEDDEIYWKQRARE 66
           WSR+++ GS+  +I RK  ++Q+L++         +   Q +L  LLE +EI+W+QR+R 
Sbjct: 157 WSRERF-GSLASSIKRKREQLQHLINETPSGFSTGILELQDDLNGLLEKEEIFWRQRSRV 216

Query: 67  DWLQWGDGNNKWFHMKASTRRKVNKIQGLFDSNGVWQERDEDMEIVANHYFQDLFLSTDP 126
            W+  GD N K+FH + + RR+ N I GL D +GVWQ     +  +A  YFQ +F S++P
Sbjct: 217 AWMSEGDKNTKFFHAQCNERRRTNHISGLRDRDGVWQTEKTKIAEIAVDYFQGIFTSSNP 276

Query: 127 QVEAMSQILDVTPICISDEQNQKLTAPFTRDKIYDIVKKMHPTKAPGPDGIQAIFYQKYW 186
             E+++ +L      +++  N +L A FT+D++   +K+M+PTKAPGPDG+ AIFYQ YW
Sbjct: 277 SAESITTVLQGMESVVTNAMNDQLQAEFTKDEVSLALKQMYPTKAPGPDGMSAIFYQTYW 336

Query: 187 DVVGTDVCDLCLGVLNEGGGLENINKTFIALIPKVLDPKSMKDFRPISLCSVLYKIISKP 246
           D+VG +V    L +L+ G  L  IN T IALIPKV +P+++ DFRPISLC+V+YKI+SK 
Sbjct: 337 DIVGPEVTQAILSILHSGYMLRKINYTHIALIPKVKNPENITDFRPISLCNVIYKIVSKV 396

Query: 247 LANRLKGVLNNIISPSQSAFIPGRLITDNV 277
           LANRLK VL  +IS +QSAF+PGRLITDNV
Sbjct: 397 LANRLKKVLPFVISEAQSAFVPGRLITDNV 425

BLAST of Lcy13g010240 vs. ExPASy TrEMBL
Match: A0A2N9IPS8 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55418 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 1.5e-65
Identity = 128/270 (47.41%), Postives = 184/270 (68.15%), Query Frame = 0

Query: 7    WSRDQYEGSIKGAIARKEREIQNLLSNGSQQDGLELSTKQRELENLLEDDEIYWKQRARE 66
            WSR+++ GS+  +I RK  ++Q+L++         +   Q +L  LLE +EI+W+QR+R 
Sbjct: 732  WSRERF-GSLASSIKRKREQLQHLINETPSGFSTGILELQDDLNGLLEKEEIFWRQRSRV 791

Query: 67   DWLQWGDGNNKWFHMKASTRRKVNKIQGLFDSNGVWQERDEDMEIVANHYFQDLFLSTDP 126
             W+  GD N K+FH + + RR+ N I GL D +GVWQ     +  +A  YFQ +F S++P
Sbjct: 792  AWMSEGDKNTKFFHAQCNERRRTNHISGLRDRDGVWQTEKTKIAEIAVDYFQGIFTSSNP 851

Query: 127  QVEAMSQILDVTPICISDEQNQKLTAPFTRDKIYDIVKKMHPTKAPGPDGIQAIFYQKYW 186
              E+++ +L      +++  N +L A FT+D++   +K+M+PTKAPGPDG+ AIFYQ YW
Sbjct: 852  SAESITTVLQGMESVVTNAMNDQLQAEFTKDEVSLALKQMYPTKAPGPDGMSAIFYQTYW 911

Query: 187  DVVGTDVCDLCLGVLNEGGGLENINKTFIALIPKVLDPKSMKDFRPISLCSVLYKIISKP 246
            D+VG +V    L +L+ G  L  IN T IALIPKV +P+++ DFRPISLC+V+YKI+SK 
Sbjct: 912  DIVGPEVTQAILSILHSGYMLRKINYTHIALIPKVKNPENITDFRPISLCNVIYKIVSKV 971

Query: 247  LANRLKGVLNNIISPSQSAFIPGRLITDNV 277
            LANRLK VL  +IS +QSAF+PGRLITDNV
Sbjct: 972  LANRLKKVLPFVISEAQSAFVPGRLITDNV 1000

BLAST of Lcy13g010240 vs. ExPASy TrEMBL
Match: A0A2N9I335 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS48349 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 1.4e-63
Identity = 130/270 (48.15%), Postives = 178/270 (65.93%), Query Frame = 0

Query: 7   WSRDQYEGSIKGAIARKEREIQNLLSNGSQQDGLELSTKQRELENLLEDDEIYWKQRARE 66
           WSRD+  GS+   I  K   +Q L+      D  E++  Q EL  LLE++EIYW+QR+R 
Sbjct: 186 WSRDRI-GSLATKIKEKRVHLQRLMQLSPGFDSPEIAEVQNELNTLLENEEIYWRQRSRV 245

Query: 67  DWLQWGDGNNKWFHMKASTRRKVNKIQGLFDSNGVWQERDEDMEIVANHYFQDLFLSTDP 126
            W++ GD N K+FH   + RR++N I+GL D+ GV Q     M  +A  YFQ +F S++P
Sbjct: 246 SWMREGDKNTKFFHAHCNHRREINLIKGLRDNEGVLQTDKIKMANIAVDYFQSIFSSSNP 305

Query: 127 QVEAMSQILDVTPICISDEQNQKLTAPFTRDKIYDIVKKMHPTKAPGPDGIQAIFYQKYW 186
             E ++  LD     +++E N  L   F  +++   +K+M+PTKAPGPDG+ A+FYQ YW
Sbjct: 306 GDETINSCLDGLERVVTEEMNNMLLEDFNSEEVSQALKQMYPTKAPGPDGMSAVFYQTYW 365

Query: 187 DVVGTDVCDLCLGVLNEGGGLENINKTFIALIPKVLDPKSMKDFRPISLCSVLYKIISKP 246
           D+VG +V    L +L+ G  +  IN T IALIPKV +P+ + DFRPISLC+V+YKI+SK 
Sbjct: 366 DIVGPEVTQAILSILHSGYMVNKINYTHIALIPKVKNPERITDFRPISLCNVIYKIVSKI 425

Query: 247 LANRLKGVLNNIISPSQSAFIPGRLITDNV 277
           LANRLK VL  +IS SQSAF+PGRLITDNV
Sbjct: 426 LANRLKKVLPYVISESQSAFVPGRLITDNV 454

BLAST of Lcy13g010240 vs. ExPASy TrEMBL
Match: A0A2N9F7A6 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS14689 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 5.2e-63
Identity = 125/273 (45.79%), Postives = 182/273 (66.67%), Query Frame = 0

Query: 7    WSRDQYEGSIKGAIARKEREIQ---NLLSNGSQQDGLELSTKQRELENLLEDDEIYWKQR 66
            WS++++ GSI  +I  K  ++Q   NL ++G     +EL T   EL  LLE +EI+W+QR
Sbjct: 896  WSQERF-GSIAASIKLKREQLQHETNLSNSGCSSRLVELQT---ELNGLLEKEEIFWRQR 955

Query: 67   AREDWLQWGDGNNKWFHMKASTRRKVNKIQGLFDSNGVWQERDEDMEIVANHYFQDLFLS 126
            +R  W+  GD N K+FH   + RR+ N I+GL+D + +WQ     +  +A  YFQ++F S
Sbjct: 956  SRISWMNEGDKNTKFFHASCTQRRQTNLIKGLYDQDNIWQTEKNKIADIAVTYFQNIFTS 1015

Query: 127  TDPQVEAMSQILDVTPICISDEQNQKLTAPFTRDKIYDIVKKMHPTKAPGPDGIQAIFYQ 186
            + P V+ ++  L+     ++ + N  L A FT ++++  +++M+PTKAPGPDG+ AIFYQ
Sbjct: 1016 SQPGVDTINSCLEGMVSVVTADMNANLLAQFTEEEVFAALQQMYPTKAPGPDGMSAIFYQ 1075

Query: 187  KYWDVVGTDVCDLCLGVLNEGGGLENINKTFIALIPKVLDPKSMKDFRPISLCSVLYKII 246
             YW+VVG +V    L +++ G  L  IN T IAL+PK+  P+ + DFRPI+LC+V+YKII
Sbjct: 1076 TYWEVVGPEVTQAILSIIHSGHMLSKINYTHIALVPKITSPEKITDFRPIALCNVIYKII 1135

Query: 247  SKPLANRLKGVLNNIISPSQSAFIPGRLITDNV 277
            SK LANRLK  L  I+S SQSAF+PGRLITDNV
Sbjct: 1136 SKVLANRLKKFLPQIVSESQSAFVPGRLITDNV 1164

BLAST of Lcy13g010240 vs. ExPASy TrEMBL
Match: A0A2N9GQ35 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29226 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 8.9e-63
Identity = 124/273 (45.42%), Postives = 182/273 (66.67%), Query Frame = 0

Query: 7   WSRDQYEGSIKGAIARKEREIQ---NLLSNGSQQDGLELSTKQRELENLLEDDEIYWKQR 66
           WS++++ GS+  +I  K  ++Q   NL  +G     +EL T   EL  LLE +EI+W+QR
Sbjct: 132 WSQERF-GSLAASIKLKREQLQHETNLSISGLSSRLVELQT---ELNGLLEKEEIFWRQR 191

Query: 67  AREDWLQWGDGNNKWFHMKASTRRKVNKIQGLFDSNGVWQERDEDMEIVANHYFQDLFLS 126
           +R  W+  GD N K+FH   + RR+ N I+GL+D + +WQ     +  +A  YFQ++F S
Sbjct: 192 SRISWMSEGDKNTKFFHASCTQRRQTNLIRGLYDQDNIWQTEKNKIADIAVTYFQNIFTS 251

Query: 127 TDPQVEAMSQILDVTPICISDEQNQKLTAPFTRDKIYDIVKKMHPTKAPGPDGIQAIFYQ 186
           + P V+ ++  L+     ++ + N  L A FT ++++  +++M+PTKAPGPDG+ AIFYQ
Sbjct: 252 SQPGVDTINSCLEGMVSVVTADMNANLLAQFTEEEVFAALQQMYPTKAPGPDGMSAIFYQ 311

Query: 187 KYWDVVGTDVCDLCLGVLNEGGGLENINKTFIALIPKVLDPKSMKDFRPISLCSVLYKII 246
            YW+VVG +V    L +++ G  L  IN T IAL+PK+  P+ + DFRPI+LC+V+YKII
Sbjct: 312 TYWEVVGPEVTQAILSIIHSGHMLSKINYTHIALVPKITSPEKITDFRPIALCNVIYKII 371

Query: 247 SKPLANRLKGVLNNIISPSQSAFIPGRLITDNV 277
           SK LANRLK +L  I+S SQSAF+PGRLITDNV
Sbjct: 372 SKVLANRLKKILPQIVSESQSAFVPGRLITDNV 400

BLAST of Lcy13g010240 vs. NCBI nr
Match: XP_006491472.1 (uncharacterized protein LOC102626455 [Citrus sinensis])

HSP 1 Score: 255.8 bits (652), Expect = 4.4e-64
Identity = 132/281 (46.98%), Postives = 186/281 (66.19%), Query Frame = 0

Query: 1   MSRLGKWSRDQYEGSIKGAIARKEREIQNLLSNGSQQ-----DGLELSTKQRELENLLED 60
           ++ L  WS++++EG  K     K+ E+ + L    Q+     DG E+   + ++ N+L D
Sbjct: 370 LAHLKIWSKEEFEGRKK-----KQNELIDRLKMTKQEPLQAIDGEEIRKLEDQISNMLVD 429

Query: 61  DEIYWKQRAREDWLQWGDGNNKWFHMKASTRRKVNKIQGLFDSNGVWQERDEDMEIVANH 120
           +E+YWKQR+R DWL+ GD N K+FH KAS RR+ NKI G+ D  G W +  E +E     
Sbjct: 430 EEVYWKQRSRADWLKEGDKNTKFFHSKASARRRKNKIWGVEDDQGNWVDDPEGIEGEFCG 489

Query: 121 YFQDLFLSTDPQVEAMSQILDVTPICISDEQNQKLTAPFTRDKIYDIVKKMHPTKAPGPD 180
           +FQ LF S++P    +S+ L      +S E N  L  PFT + I   + +M PTKAPGPD
Sbjct: 490 FFQQLFTSSNPSQTQISEALKGLLPKVSQEMNTHLEEPFTPEDITRALSEMCPTKAPGPD 549

Query: 181 GIQAIFYQKYWDVVGTDVCDLCLGVLNEGGGLENINKTFIALIPKVLDPKSMKDFRPISL 240
           G+ A F+QK+W +VG  +   CL +LNE G L+++N TFIALIPKV  P+ + +FRPISL
Sbjct: 550 GLPAAFFQKHWQIVGEGLTKTCLHILNEQGTLDSLNHTFIALIPKVEKPRKVMEFRPISL 609

Query: 241 CSVLYKIISKPLANRLKGVLNNIISPSQSAFIPGRLITDNV 277
           C+V+Y+I++K +ANRLK +LN+IISP+QSAFIP RLITDNV
Sbjct: 610 CNVVYRIVAKAIANRLKPILNHIISPNQSAFIPNRLITDNV 645

BLAST of Lcy13g010240 vs. NCBI nr
Match: XP_023881891.1 (uncharacterized protein LOC111994244 [Quercus suber])

HSP 1 Score: 253.1 bits (645), Expect = 2.8e-63
Identity = 130/274 (47.45%), Postives = 183/274 (66.79%), Query Frame = 0

Query: 4   LGKWSRDQYEGSIKGAIARKEREIQNLL-SNGSQQDGLELSTKQRELENLLEDDEIYWKQ 63
           L +W++  + G+I   I  K+  +  L+ S+ +   G E++  ++E+  LL+ +EI W+Q
Sbjct: 120 LSEWNKMIF-GNIPRKIQEKKETLNALVHSDRNGSLGGEINMLRKEINELLDSEEIKWQQ 179

Query: 64  RAREDWLQWGDGNNKWFHMKASTRRKVNKIQGLFDSNGVWQERDEDMEIVANHYFQDLFL 123
           R+R  WL  GD N K+FH KAS RR+ N I G+ D NG WQ+  E +  VA  YFQ ++ 
Sbjct: 180 RSRVQWLGLGDRNTKYFHTKASDRRRRNTINGIMDENGNWQDSTEGIAKVAVSYFQTIYS 239

Query: 124 STDPQVEAMSQILDVTPICISDEQNQKLTAPFTRDKIYDIVKKMHPTKAPGPDGIQAIFY 183
           S+ P    +S++LD  P  +++E N  L   FTR++I   + +MHPTKAPGPDG+ AIF+
Sbjct: 240 SSVP--TRISEVLDAIPTTVTEEMNHSLIQEFTREEIETALNQMHPTKAPGPDGMSAIFF 299

Query: 184 QKYWDVVGTDVCDLCLGVLNEGGGLENINKTFIALIPKVLDPKSMKDFRPISLCSVLYKI 243
           QKYW++VG D+  + L VLN    +  INKT I L+PK+ +P  M DFRPISLC+V+YK+
Sbjct: 300 QKYWNIVGNDIVCMVLDVLNSNMSMVEINKTNITLVPKIKNPTKMSDFRPISLCNVVYKL 359

Query: 244 ISKPLANRLKGVLNNIISPSQSAFIPGRLITDNV 277
           ISK LANRLK +L  IIS +QSAF+ GRLITDNV
Sbjct: 360 ISKVLANRLKNILPQIISENQSAFLSGRLITDNV 390

BLAST of Lcy13g010240 vs. NCBI nr
Match: XP_006487889.1 (uncharacterized protein LOC102617714 [Citrus sinensis])

HSP 1 Score: 248.4 bits (633), Expect = 7.0e-62
Identity = 123/277 (44.40%), Postives = 183/277 (66.06%), Query Frame = 0

Query: 1   MSRLGKWSRDQYEGSIKGAIARKEREIQNLLSNGSQQD-GLELSTKQRELENLLEDDEIY 60
           +  L  WS+ ++ G  K  + + + +++++  + S  D G EL   + +++N+L+D+EI+
Sbjct: 201 LGELQLWSKKEFGGRQK-QLEQLQNKLKSIRHSFSHYDCGDELKKTENQIDNILQDEEIF 260

Query: 61  WKQRAREDWLQWGDGNNKWFHMKASTRRKVNKIQGLFDSNGVWQERDEDMEIVANHYFQD 120
           WKQR+R DWL+ GD N K+FH KAS RRK N+I G+ D  G W E  +++E +   +F  
Sbjct: 261 WKQRSRADWLKEGDKNTKFFHAKASARRKKNRIGGILDEQGKWTEDSDEVERIFCEHFTT 320

Query: 121 LFLSTDPQVEAMSQILDVTPICISDEQNQKLTAPFTRDKIYDIVKKMHPTKAPGPDGIQA 180
           LF +T P  E M      T   +++E N +L APF  ++I + + +M PTKAPGPDG+ A
Sbjct: 321 LFSTTAPTAEQMDAAFKDTSAKVNEEMNFQLDAPFMEEEIVEALAQMCPTKAPGPDGLPA 380

Query: 181 IFYQKYWDVVGTDVCDLCLGVLNEGGGLENINKTFIALIPKVLDPKSMKDFRPISLCSVL 240
            F+QK+W  V   V   CL +LN+ G L  +N T+IALIPK   PKS+ +FRPISLC+V+
Sbjct: 381 AFFQKHWGSVKEGVITTCLHILNDKGNLAPLNHTYIALIPKTTKPKSVSEFRPISLCNVI 440

Query: 241 YKIISKPLANRLKGVLNNIISPSQSAFIPGRLITDNV 277
           Y+II+K +AN LK +L+ I+SP+QSAFI  RLITDN+
Sbjct: 441 YRIIAKSMANGLKHILDKIVSPNQSAFILNRLITDNI 476

BLAST of Lcy13g010240 vs. NCBI nr
Match: XP_015388020.1 (uncharacterized protein LOC107177951 [Citrus sinensis])

HSP 1 Score: 243.8 bits (621), Expect = 1.7e-60
Identity = 121/284 (42.61%), Postives = 180/284 (63.38%), Query Frame = 0

Query: 1   MSRLGKWSRDQYEGSIKGAIARKEREIQNLL--------SNGSQQDGLELSTKQRELENL 60
           ++ L  WS+  + G        +E++++ LL        +N     G ++   +R++++L
Sbjct: 143 LAELKLWSKQAFGG--------REKKLKKLLAELKTYKDNNNHYSSGDQVKLLERQIDDL 202

Query: 61  LEDDEIYWKQRAREDWLQWGDGNNKWFHMKASTRRKVNKIQGLFDSNGVWQERDEDMEIV 120
           L D+EIYW+QR+R  WLQ GD N K+FH KAS R++ N I G+ D N  W E+ ED+E +
Sbjct: 203 LIDEEIYWRQRSRAVWLQEGDKNTKFFHSKASARKRKNWISGIVDENNRWSEKAEDIERM 262

Query: 121 ANHYFQDLFLSTDPQVEAMSQILDVTPICISDEQNQKLTAPFTRDKIYDIVKKMHPTKAP 180
              Y+ +LF ST+P  + +   L   P  +S E N  L  PFT   I + + +MHPTKAP
Sbjct: 263 FCEYYHNLFTSTNPSQQHLELALRNMPHKVSAEMNSHLDQPFTEADILEALSQMHPTKAP 322

Query: 181 GPDGIQAIFYQKYWDVVGTDVCDLCLGVLNEGGGLENINKTFIALIPKVLDPKSMKDFRP 240
           GPDG+   F+QK+W  V   V   CL +LNEGG +  +N TFI LI K+  P+++ ++RP
Sbjct: 323 GPDGLPTAFFQKHWASVSEGVIATCLHILNEGGNIAPLNHTFICLILKIAKPRTVMEYRP 382

Query: 241 ISLCSVLYKIISKPLANRLKGVLNNIISPSQSAFIPGRLITDNV 277
           ISLC+V+Y+II+K +ANRLK +L ++I P+QSAF+P RLITDN+
Sbjct: 383 ISLCNVIYRIIAKTIANRLKLILESVILPTQSAFVPNRLITDNI 418

BLAST of Lcy13g010240 vs. NCBI nr
Match: XP_028090832.1 (uncharacterized protein LOC114291041 [Camellia sinensis])

HSP 1 Score: 243.0 bits (619), Expect = 2.9e-60
Identity = 130/276 (47.10%), Postives = 180/276 (65.22%), Query Frame = 0

Query: 2   SRLGKWSRDQYEGSIKGAIARKEREIQNL--LSNGSQQDGLELSTKQRELENLLEDDEIY 61
           S L +W R+ + G +K  +  K  ++Q L  LS+    D  E+   + +++ LLE + I+
Sbjct: 289 SSLRRWDRNVF-GCVKRQLKEKTDQLQRLLTLSSNFPDDVAEMCKLRCDIDELLEQESIF 348

Query: 62  WKQRAREDWLQWGDGNNKWFHMKASTRRKVNKIQGLFDSNGVWQERDEDMEIVANHYFQD 121
           W QRAR +WL+ GD N  +FH KA+ R K  KI G+ D NG+WQE    +E    +YFQ+
Sbjct: 349 WGQRARANWLKDGDRNTSFFHSKATQRHKQKKIAGIIDPNGIWQEDQRVVEDNFVNYFQE 408

Query: 122 LFLSTDPQVEAMSQILDVTPICISDEQNQKLTAPFTRDKIYDIVKKMHPTKAPGPDGIQA 181
           LF + +     M  IL +    +SD    +L+ PF+  +++  + +MHPTKAPGPDG  A
Sbjct: 409 LFSAGEGL--NMGPILQLIQERVSDHSASQLSRPFSEVEVHHALFQMHPTKAPGPDGKPA 468

Query: 182 IFYQKYWDVVGTDVCDLCLGVLNEGGGLENINKTFIALIPKVLDPKSMKDFRPISLCSVL 241
           +F+QK+W VVG  V  + LGVLN    + +IN TFI LIPK+ +PK M +FRPISLC+V+
Sbjct: 469 LFFQKFWQVVGPSVSSVVLGVLNGVDEISHINHTFIVLIPKIKNPKLMSEFRPISLCNVV 528

Query: 242 YKIISKPLANRLKGVLNNIISPSQSAFIPGRLITDN 276
           YKIISK LANRLK VL ++IS +QSAFIPGRLITDN
Sbjct: 529 YKIISKMLANRLKEVLPSVISDTQSAFIPGRLITDN 561

BLAST of Lcy13g010240 vs. TAIR 10
Match: AT1G43760.1 (DNAse I-like superfamily protein )

HSP 1 Score: 89.4 bits (220), Expect = 5.1e-18
Identity = 60/191 (31.41%), Postives = 94/191 (49.21%), Query Frame = 0

Query: 57  EIYWKQRAREDWLQWGDGNNKWFHMKASTRRKVNKIQGLFDSNGVWQERDEDMEIVANHY 116
           E +++Q++R  WLQ GD N ++FH      +  N I+ L   + V  E    ++ +   Y
Sbjct: 432 ESFYRQKSRIKWLQDGDANTRFFHKVILANQAKNLIKFLRMDDDVRVENVTQVKEMIVAY 491

Query: 117 FQDLFLSTDPQV---EAMSQILDVTPICISDEQNQKLTAPFTRDKIYDIVKKMHPTKAPG 176
           +  L L +D  +   +++ +I D+ P   +D    +L+A  +  +I   V  M   KAPG
Sbjct: 492 YTHL-LGSDSDILTPDSVQRIKDIHPFRCNDTLASRLSALPSDKEITAAVFAMPRNKAPG 551

Query: 177 PDGIQAIFYQKYWDVVGTDVCDLCLGVLNEGGGLENINKTFIALIPKVLDPKSMKDFRPI 236
           PD   A F+ + W VV              G  L+  N T I LIPKV     +  FRP+
Sbjct: 552 PDSFTAEFFWESWFVVKDSTIAAVKEFFRTGHLLKRFNATAITLIPKVTGVDQLSMFRPV 611

Query: 237 SLCSVLYKIIS 245
           S C+V+YKII+
Sbjct: 612 SCCTVVYKIIT 621

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P143811.3e-2329.27Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV... [more]
O003703.5e-1630.11LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1[more]
P113693.3e-1429.51LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE... [more]
P164235.3e-0431.78Retrovirus-related Pol polyprotein from type-2 retrotransposable element R2DM OS... [more]
Match NameE-valueIdentityDescription
A0A2N9GPZ71.5e-6547.41Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A2N9IPS81.5e-6547.41Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A2N9I3351.4e-6348.15Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A2N9F7A65.2e-6345.79Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS14689 PE=4 SV=1[more]
A0A2N9GQ358.9e-6345.42Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
Match NameE-valueIdentityDescription
XP_006491472.14.4e-6446.98uncharacterized protein LOC102626455 [Citrus sinensis][more]
XP_023881891.12.8e-6347.45uncharacterized protein LOC111994244 [Quercus suber][more]
XP_006487889.17.0e-6244.40uncharacterized protein LOC102617714 [Citrus sinensis][more]
XP_015388020.11.7e-6042.61uncharacterized protein LOC107177951 [Citrus sinensis][more]
XP_028090832.12.9e-6047.10uncharacterized protein LOC114291041 [Camellia sinensis][more]
Match NameE-valueIdentityDescription
AT1G43760.15.1e-1831.41DNAse I-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 224..276
e-value: 1.5E-10
score: 41.0
NoneNo IPR availablePANTHERPTHR19446:SF440SUBFAMILY NOT NAMEDcoord: 22..276
NoneNo IPR availablePANTHERPTHR19446REVERSE TRANSCRIPTASEScoord: 22..276
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 141..270

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy13g010240.1Lcy13g010240.1mRNA