Lcy13g009460 (gene) Sponge gourd (P93075) v1

Overview
NameLcy13g009460
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description60S ribosomal protein L35a-1
LocationChr13: 9592454 .. 9594864 (+)
RNA-Seq ExpressionLcy13g009460
SyntenyLcy13g009460
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTCGTCACTTCGTTGGTCGTCCAAACCCTGTAGTTGAAGGAGAAACCAGACGCCGAAGATGGTGAAAGGAAGCCAAGGAGAGAGAGTCAGGTCTGTAATCCAAACCTACGCAATATCAATCTTCCAAGTCCTCTTTCTATGATTATTACACTGAAATTGTTTCATTGTTCTTTCGCTTCTGTTTCTTGTTGGATTCAGACTCTACGTCAGGGGAACAATTCTCGGCTACAAGAGGTAATCAAGCATTACTGTCTACCAACTCTCATTTATGTTTTCTTGCATTCTGTAAAACCGACGAAGTAACGTTTGTGTTGTTTATATGCCGAGAATGTATTGGAAAATTGAAAGTAGATCATGTTCTTACTAGGCAAGGGTTTGGGATTAGTTTGCCATTTTTTCGAAAACTAAAGATGATTGGTGTTGGTGGTTAGGTCGAAGTCGAACCAGTACCCAAACACTTCTTTACTCCAGATCGAGGGTGTTAATTCTAAGGATGAGGTTTCCTGGTACCAGGGAAAGCGACTGGCATATATCTACAGGGCTAAAGTGAAGAAGAACGGTACTCATTATCGTTGCATTTGGGGCAAGGTTGCTAGGCCTCATGGTAACAGTGGCATCGTTAGAGCGAAGTTCAAGTCTAACCTGCCACCAAAGTCCATGGTATAGACTTATTGTTAAAAACAACACTATTTGAAGTGTTTGAGGCCTCTCTCTGTCTTGGTTTTAACAAGTTTTGTACTTCACTGCAGGGTGACAGAGTCAGAGTATTCATGTACCCCAGCAACATTTGAGGTGACTAGCTTCTTTATATGCTGAAAACATTCATATTTTGGTGTTTTTCCCTCTATTTTTTACCCCTTGAATGTTTTGATGCTGTTTATTATGGCTTCTGTCTTTGTGTCGAAGCGAATTAGTTTAGTTATCTAACTTTGGTAGTCCGTAGTTGCAATGTTCCTCCATAACCATATTGTTCATCGATGTGGGATGGCTGCATGCCTTTGCCAAAAGGCCTCGTCAGTAGAATTCTGCTTGCATTCGTTTGAGATAGATTCATTAGAATTTTGGATATAGTTATTTTGATGAAGTAGACACTTTCTTTTAACCAAGTATTTATGGGTCCATAGCGATTGTGTTATCACCGTTATGGAGTATCTTTTTTAGAAAACTACCAAACGCTGTCCCCAGTTTGTCACTTGGTGATAGAAATGGTTGAAGGATGGCTGGGTTGTAAAAGATGGAGAATGCATTTTGTTGAATAGTTTATGGAAATTTGGCAGAAGTTATGTGAATTGACAGCCAGTTGCTGCTGATTACATAGTGTTTAATAATTATGTTTTGACCAATTAATCAATACTAAAATTTCTGTTGCCATTGGTCATTGTTATGTTGTCCTTATTGGTAGTTTTTGTATTGTTGGCTATTTTCGTTTTTAACTTAGGAAGACAAATTTTATACATCGTACATTGTTATATATAATAAATGTGTTCATCACTATATTTAATTGCTTTGTTGGAGATGCCGCTATGTTGTTGAAAGGATCTGAAAAATGGCTTAAATTAGGAGCTGAATGTGCTTTTGATTCCTTGTTTGTTGTGTTATGATTATGTTAAATTTACTCAACTGTCTGCAATAGCTTAAAGTTAATTTGTGGGTGAAGTGCAGACCGTGAATAAAACCTGTGTTGTGTTGTATTATTGCATGTAATAATTGAATGCTATCTATGGTAGTACACCTCTAATGCTCTTTTTATGAAGGATAAAGTTTTTCCTTTTAGATAATTGATATAAAAGCTTGCATTATGTATGAACTTTCATCTTAACATTTTCTCTTCTGCAGAATTTTCTGCCATTTGTTTTTCTTATCCCTTAAATTTCTAAAATTTTGTTTTACATATAACTATACATATGTATCCTAATACTAATTTGAATGGAAAATAACTTATGATTGCAATCAATTTTCAGGACAGAGATGTTATAACGTGAGTATATTCTAATGACCATGTTTTGTTTTTTTGTTGGGGGAGGGTTGTGGGAGTTTGTTCCCTGCATTACCCATGAACCGTACTCAGATGATTTAGTTTTCTATCTCGCTTTTGCATATTAAATTACTTGGCTTCTGTTTATTTACCATTGCTTATTGTTTCTTTGCAGTCATGGAGAACCTGGATGAAGCTAGTGGTTGTTACATGAAGGGATTCATATTTTTATTAAATTTTGTGAGCTAAGATAGAAGCATTTTCTGTTTCTGAACTGAGTCATTTTTGCTGTTTAGTTAATGTTTCACTCCCAAGTAGTTGAACAGAAATTTAAAACCATTTGTCTTGATCAGTTTCATGTGTTAACCGATATAGTTTCACTCTTATCAAGTGGTTTTACCGTATACAAAGCCTCTGGATTTGCTTTTTCTGTTA

mRNA sequence

GTTCGTCACTTCGTTGGTCGTCCAAACCCTGTAGTTGAAGGAGAAACCAGACGCCGAAGATGGTGAAAGGAAGCCAAGGAGAGAGAGTCAGACTCTACGTCAGGGGAACAATTCTCGGCTACAAGAGGTCGAAGTCGAACCAGTACCCAAACACTTCTTTACTCCAGATCGAGGGTGTTAATTCTAAGGATGAGGTTTCCTGGTACCAGGGAAAGCGACTGGCATATATCTACAGGGCTAAAGTGAAGAAGAACGGTACTCATTATCGTTGCATTTGGGGCAAGGTTGCTAGGCCTCATGGTAACAGTGGCATCGTTAGAGCGAAGTTCAAGTCTAACCTGCCACCAAAGTCCATGGGTGACAGAGTCAGAGTATTCATGTACCCCAGCAACATTTGAGTCATGGAGAACCTGGATGAAGCTAGTGGTTGTTACATGAAGGGATTCATATTTTTATTAAATTTTGTGAGCTAAGATAGAAGCATTTTCTGTTTCTGAACTGAGTCATTTTTGCTGTTTAGTTAATGTTTCACTCCCAAGTAGTTGAACAGAAATTTAAAACCATTTGTCTTGATCAGTTTCATGTGTTAACCGATATAGTTTCACTCTTATCAAGTGGTTTTACCGTATACAAAGCCTCTGGATTTGCTTTTTCTGTTA

Coding sequence (CDS)

ATGGTGAAAGGAAGCCAAGGAGAGAGAGTCAGACTCTACGTCAGGGGAACAATTCTCGGCTACAAGAGGTCGAAGTCGAACCAGTACCCAAACACTTCTTTACTCCAGATCGAGGGTGTTAATTCTAAGGATGAGGTTTCCTGGTACCAGGGAAAGCGACTGGCATATATCTACAGGGCTAAAGTGAAGAAGAACGGTACTCATTATCGTTGCATTTGGGGCAAGGTTGCTAGGCCTCATGGTAACAGTGGCATCGTTAGAGCGAAGTTCAAGTCTAACCTGCCACCAAAGTCCATGGGTGACAGAGTCAGAGTATTCATGTACCCCAGCAACATTTGA

Protein sequence

MVKGSQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYRAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
Homology
[Close]
BLAST of Lcy13g009460 vs. ExPASy Swiss-Prot
Match: Q9LMK0 (60S ribosomal protein L35a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL35AA PE=3 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 3.0e-54
Identity = 97/112 (86.61%), Postives = 106/112 (94.64%), Query Frame = 0 

Query: 1   MVKGSQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYRA 60
           MVKG QGERVRLYVRGTILGYKRSKSNQYPNTSL+Q+EGVN+ +EVSWY+GKR+AYIY+A
Sbjct: 1   MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQVEGVNTTEEVSWYKGKRMAYIYKA 60

Query: 61  KVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
           K KKNG+HYRCIWGKV RPHGNSG+VRAKF SNLPPKSMG RVRVFMYPSNI
Sbjct: 61  KTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112

[Close]
BLAST of Lcy13g009460 vs. ExPASy Swiss-Prot
Match: Q9C912 (60S ribosomal protein L35a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL35AC PE=3 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 3.0e-54
Identity = 97/112 (86.61%), Postives = 107/112 (95.54%), Query Frame = 0 

Query: 1   MVKGSQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYRA 60
           MVKG QGERVRLYVRGTILGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKR+AYIY+A
Sbjct: 1   MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRMAYIYKA 60

Query: 61  KVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
           K KKNG+HYRCIWGKV RPHGNSG+VRAKF SNLPPKSMG RVRVFMYPSNI
Sbjct: 61  KTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112

[Close]
BLAST of Lcy13g009460 vs. ExPASy Swiss-Prot
Match: Q9FZH0 (60S ribosomal protein L35a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL35AB PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 5.6e-53
Identity = 94/111 (84.68%), Postives = 106/111 (95.50%), Query Frame = 0 

Query: 2   VKGSQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYRAK 61
           +KG QGERVRLYVRGT+LGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKRLAYIY+AK
Sbjct: 1   MKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLIQIEGVNTQEEVNWYKGKRLAYIYKAK 60

Query: 62  VKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
            KKNG+HYRCIWGKV RPHGNSG+VR+KF SNLPPKSMG RVRVFMYPSNI
Sbjct: 61  TKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111

[Close]
BLAST of Lcy13g009460 vs. ExPASy Swiss-Prot
Match: P51422 (60S ribosomal protein L35a-4 OS=Arabidopsis thaliana OX=3702 GN=RPL35AD PE=3 SV=2)

HSP 1 Score: 207.6 bits (527), Expect = 7.3e-53
Identity = 94/111 (84.68%), Postives = 106/111 (95.50%), Query Frame = 0 

Query: 2   VKGSQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYRAK 61
           +KG QGERVRLYVRGT+LGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKRLAYIY+AK
Sbjct: 1   MKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRLAYIYKAK 60

Query: 62  VKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
            KKNG+HYRCIWGKV RPHGNSG+VR+KF SNLPPKSMG RVRVFMYPSNI
Sbjct: 61  TKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111

[Close]
BLAST of Lcy13g009460 vs. ExPASy Swiss-Prot
Match: P41056 (60S ribosomal protein L33-B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RPL33B PE=1 SV=2)

HSP 1 Score: 124.0 bits (310), Expect = 1.1e-27
Identity = 58/105 (55.24%), Postives = 75/105 (71.43%), Query Frame = 0 

Query: 8   ERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYRAKVKKNGT 67
           E  RLYV+G  L Y+RSK    PN SL++IEGV +  E  +Y GKR+AY+YRA  +  G+
Sbjct: 3   ESHRLYVKGKHLSYQRSKRVNNPNVSLIKIEGVATPQEAQFYLGKRIAYVYRASKEVRGS 62

Query: 68  HYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
             R +WGKV R HGNSG+VRA F++NLP K+ G  VR+F+YPSNI
Sbjct: 63  KIRVMWGKVTRTHGNSGVVRATFRNNLPAKTFGASVRIFLYPSNI 107

[Close]
BLAST of Lcy13g009460 vs. ExPASy TrEMBL
Match: A0A6J1IM24 (60S ribosomal protein L35a-1-like OS=Cucurbita maxima OX=3661 GN=LOC111478250 PE=3 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 6.6e-57
Identity = 109/112 (97.32%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 1   MVKGSQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYRA 60
           MVKGSQGERVRLY RGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIY+A
Sbjct: 1   MVKGSQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60

Query: 61  KVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
           KVKKNG+HYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
Sbjct: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 112

[Close]
BLAST of Lcy13g009460 vs. ExPASy TrEMBL
Match: A0A6J1GZF1 (60S ribosomal protein L35a-1 OS=Cucurbita moschata OX=3662 GN=LOC111458531 PE=3 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 6.6e-57
Identity = 109/112 (97.32%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 1   MVKGSQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYRA 60
           MVKGSQGERVRLY RGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIY+A
Sbjct: 1   MVKGSQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60

Query: 61  KVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
           KVKKNG+HYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
Sbjct: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 112

[Close]
BLAST of Lcy13g009460 vs. ExPASy TrEMBL
Match: A0A6J1DUY8 (60S ribosomal protein L35a-1 OS=Momordica charantia OX=3673 GN=LOC111023732 PE=3 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 8.6e-57
Identity = 108/112 (96.43%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 1   MVKGSQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYRA 60
           MVKG +GERVRLY+RGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIY+A
Sbjct: 1   MVKGREGERVRLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60

Query: 61  KVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
           KVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
Sbjct: 61  KVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 112

[Close]
BLAST of Lcy13g009460 vs. ExPASy TrEMBL
Match: A0A6J1CBN5 (60S ribosomal protein L35a-1-like OS=Momordica charantia OX=3673 GN=LOC111010174 PE=3 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.1e-56
Identity = 107/112 (95.54%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 1   MVKGSQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYRA 60
           MVKG +GERVRLY+RGT+LGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIY+A
Sbjct: 1   MVKGREGERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60

Query: 61  KVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
           KVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
Sbjct: 61  KVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 112

[Close]
BLAST of Lcy13g009460 vs. ExPASy TrEMBL
Match: A0A5A7T1I6 (Ribosomal protein L35A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold85G00970 PE=3 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 2.5e-56
Identity = 108/112 (96.43%), Postives = 110/112 (98.21%), Query Frame = 0 

Query: 1   MVKGSQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYRA 60
           MVKG QGERVRLY RGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIY+A
Sbjct: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60

Query: 61  KVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
           KVKKNG+HYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
Sbjct: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 112

[Close]
BLAST of Lcy13g009460 vs. NCBI nr
Match: XP_022957040.1 (60S ribosomal protein L35a-1 [Cucurbita moschata] >XP_022978196.1 60S ribosomal protein L35a-1-like [Cucurbita maxima] >XP_023529930.1 60S ribosomal protein L35a-1 [Cucurbita pepo subsp. pepo] >KAG7031585.1 60S ribosomal protein L35a-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 229.6 bits (584), Expect = 1.4e-56
Identity = 109/112 (97.32%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 1   MVKGSQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYRA 60
           MVKGSQGERVRLY RGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIY+A
Sbjct: 1   MVKGSQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60

Query: 61  KVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
           KVKKNG+HYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
Sbjct: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 112

[Close]
BLAST of Lcy13g009460 vs. NCBI nr
Match: XP_022156899.1 (60S ribosomal protein L35a-1 [Momordica charantia])

HSP 1 Score: 229.2 bits (583), Expect = 1.8e-56
Identity = 108/112 (96.43%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 1   MVKGSQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYRA 60
           MVKG +GERVRLY+RGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIY+A
Sbjct: 1   MVKGREGERVRLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60

Query: 61  KVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
           KVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
Sbjct: 61  KVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 112

[Close]
BLAST of Lcy13g009460 vs. NCBI nr
Match: XP_022139205.1 (60S ribosomal protein L35a-1-like [Momordica charantia])

HSP 1 Score: 228.8 bits (582), Expect = 2.3e-56
Identity = 107/112 (95.54%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 1   MVKGSQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYRA 60
           MVKG +GERVRLY+RGT+LGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIY+A
Sbjct: 1   MVKGREGERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60

Query: 61  KVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
           KVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
Sbjct: 61  KVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 112

[Close]
BLAST of Lcy13g009460 vs. NCBI nr
Match: XP_008463199.1 (PREDICTED: 60S ribosomal protein L35a-1 [Cucumis melo] >XP_011654980.1 60S ribosomal protein L35a-1 [Cucumis sativus] >KAA0037334.1 Ribosomal protein L35A [Cucumis melo var. makuwa] >KGN50623.1 hypothetical protein Csa_021400 [Cucumis sativus] >TYJ97573.1 Ribosomal protein L35A [Cucumis melo var. makuwa])

HSP 1 Score: 227.6 bits (579), Expect = 5.2e-56
Identity = 108/112 (96.43%), Postives = 110/112 (98.21%), Query Frame = 0 

Query: 1   MVKGSQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYRA 60
           MVKG QGERVRLY RGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIY+A
Sbjct: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60

Query: 61  KVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
           KVKKNG+HYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
Sbjct: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 112

[Close]
BLAST of Lcy13g009460 vs. NCBI nr
Match: XP_022156649.1 (60S ribosomal protein L35a-1-like [Momordica charantia])

HSP 1 Score: 226.1 bits (575), Expect = 1.5e-55
Identity = 107/112 (95.54%), Postives = 110/112 (98.21%), Query Frame = 0 

Query: 1   MVKGSQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYRA 60
           MVKG +GERVRLY+RGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIY+A
Sbjct: 1   MVKGREGERVRLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60

Query: 61  KVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
           KVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNL PKSMGDRVRVFMYPSNI
Sbjct: 61  KVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLSPKSMGDRVRVFMYPSNI 112

[Close]
BLAST of Lcy13g009460 vs. TAIR 10
Match: AT1G07070.1 (Ribosomal protein L35Ae family protein )

HSP 1 Score: 212.2 bits (539), Expect = 2.1e-55
Identity = 97/112 (86.61%), Postives = 106/112 (94.64%), Query Frame = 0 

Query: 1   MVKGSQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYRA 60
           MVKG QGERVRLYVRGTILGYKRSKSNQYPNTSL+Q+EGVN+ +EVSWY+GKR+AYIY+A
Sbjct: 1   MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQVEGVNTTEEVSWYKGKRMAYIYKA 60

Query: 61  KVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
           K KKNG+HYRCIWGKV RPHGNSG+VRAKF SNLPPKSMG RVRVFMYPSNI
Sbjct: 61  KTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112

[Close]
BLAST of Lcy13g009460 vs. TAIR 10
Match: AT1G74270.1 (Ribosomal protein L35Ae family protein )

HSP 1 Score: 212.2 bits (539), Expect = 2.1e-55
Identity = 97/112 (86.61%), Postives = 107/112 (95.54%), Query Frame = 0 

Query: 1   MVKGSQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYRA 60
           MVKG QGERVRLYVRGTILGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKR+AYIY+A
Sbjct: 1   MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRMAYIYKA 60

Query: 61  KVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
           K KKNG+HYRCIWGKV RPHGNSG+VRAKF SNLPPKSMG RVRVFMYPSNI
Sbjct: 61  KTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112

[Close]
BLAST of Lcy13g009460 vs. TAIR 10
Match: AT1G41880.1 (Ribosomal protein L35Ae family protein )

HSP 1 Score: 208.0 bits (528), Expect = 4.0e-54
Identity = 94/111 (84.68%), Postives = 106/111 (95.50%), Query Frame = 0 

Query: 2   VKGSQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYRAK 61
           +KG QGERVRLYVRGT+LGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKRLAYIY+AK
Sbjct: 1   MKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLIQIEGVNTQEEVNWYKGKRLAYIYKAK 60

Query: 62  VKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
            KKNG+HYRCIWGKV RPHGNSG+VR+KF SNLPPKSMG RVRVFMYPSNI
Sbjct: 61  TKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111

[Close]
BLAST of Lcy13g009460 vs. TAIR 10
Match: AT3G55750.1 (Ribosomal protein L35Ae family protein )

HSP 1 Score: 207.6 bits (527), Expect = 5.2e-54
Identity = 94/111 (84.68%), Postives = 106/111 (95.50%), Query Frame = 0 

Query: 2   VKGSQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYRAK 61
           +KG QGERVRLYVRGT+LGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKRLAYIY+AK
Sbjct: 1   MKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRLAYIYKAK 60

Query: 62  VKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
            KKNG+HYRCIWGKV RPHGNSG+VR+KF SNLPPKSMG RVRVFMYPSNI
Sbjct: 61  TKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111

The following BLAST results are available for this feature:
BLAST of Lcy13g009460 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LMK03.0e-5486.6160S ribosomal protein L35a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL35AA PE=3 SV=... [more]
Q9C9123.0e-5486.6160S ribosomal protein L35a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL35AC PE=3 SV=... [more]
Q9FZH05.6e-5384.6860S ribosomal protein L35a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL35AB PE=3 SV=... [more]
P514227.3e-5384.6860S ribosomal protein L35a-4 OS=Arabidopsis thaliana OX=3702 GN=RPL35AD PE=3 SV=... [more]
P410561.1e-2755.2460S ribosomal protein L33-B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S2... [more]
BLAST of Lcy13g009460 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1IM246.6e-5797.3260S ribosomal protein L35a-1-like OS=Cucurbita maxima OX=3661 GN=LOC111478250 PE... [more]
A0A6J1GZF16.6e-5797.3260S ribosomal protein L35a-1 OS=Cucurbita moschata OX=3662 GN=LOC111458531 PE=3 ... [more]
A0A6J1DUY88.6e-5796.4360S ribosomal protein L35a-1 OS=Momordica charantia OX=3673 GN=LOC111023732 PE=3... [more]
A0A6J1CBN51.1e-5695.5460S ribosomal protein L35a-1-like OS=Momordica charantia OX=3673 GN=LOC111010174... [more]
A0A5A7T1I62.5e-5696.43Ribosomal protein L35A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold8... [more]
BLAST of Lcy13g009460 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022957040.11.4e-5697.3260S ribosomal protein L35a-1 [Cucurbita moschata] >XP_022978196.1 60S ribosomal ... [more]
XP_022156899.11.8e-5696.4360S ribosomal protein L35a-1 [Momordica charantia][more]
XP_022139205.12.3e-5695.5460S ribosomal protein L35a-1-like [Momordica charantia][more]
XP_008463199.15.2e-5696.43PREDICTED: 60S ribosomal protein L35a-1 [Cucumis melo] >XP_011654980.1 60S ribos... [more]
XP_022156649.11.5e-5595.5460S ribosomal protein L35a-1-like [Momordica charantia][more]
BLAST of Lcy13g009460 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G07070.12.1e-5586.61Ribosomal protein L35Ae family protein [more]
AT1G74270.12.1e-5586.61Ribosomal protein L35Ae family protein [more]
AT1G41880.14.0e-5484.68Ribosomal protein L35Ae family protein [more]
AT3G55750.15.2e-5484.68Ribosomal protein L35Ae family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001780Ribosomal protein L35APFAMPF01247Ribosomal_L35Aecoord: 12..106
e-value: 1.4E-43
score: 147.0
IPR001780Ribosomal protein L35APANTHERPTHR1090260S RIBOSOMAL PROTEIN L35Acoord: 1..112
IPR001780Ribosomal protein L35AHAMAPMF_00573Ribosomal_L35Aecoord: 14..106
score: 25.281054
IPR038661Ribosomal protein L35A superfamilyGENE3D2.40.10.190translation elongation factor selb, chain A, domain 4coord: 6..112
e-value: 7.3E-51
score: 172.6
NoneNo IPR availablePANTHERPTHR10902:SF2060S RIBOSOMAL PROTEIN L35A-1coord: 1..112
IPR018266Ribosomal protein L35Ae, conserved sitePROSITEPS01105RIBOSOMAL_L35AEcoord: 74..95
IPR009000Translation protein, beta-barrel domain superfamilySUPERFAMILY50447Translation proteinscoord: 12..106

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy13g009460.1Lcy13g009460.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0002181 cytoplasmic translation
biological_process GO:0015031 protein transport
biological_process GO:0042273 ribosomal large subunit biogenesis
biological_process GO:0016192 vesicle-mediated transport
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome