Lcy13g008940 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy13g008940
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Small polypeptide DEVIL 11
Location	Chr13: 8804086 .. 8805128 (+)
RNA-Seq Expression	Lcy13g008940
Synteny	Lcy13g008940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCTCGCTTTGGCAAAAAAAAAAAAAAATCCCATTTTTACAATCCCAGAATTTCTTTTTACAGTGGTTTAATTAGTAGACCTCCATGACGTGTGGCTTTGGAAACTCACCTCCATTATAATAATCCCTACTCGAATTAGATTCTTTATTTTCAAAAATATCATTTATATATTCACAAAATTAAAAATAAAAAAATATATAATATTATAATGGCGTATCTCTGGATGGGGAAAGGAAAGAAAAACCAGGTGTGTGATTCCCACTGCCACGCCCTTTTCTTTAACCTCTTATAAATACCATTGGAGCCTCCTTCAAAGCTTAATAATCCACTCTCTCTCTCTAAAACCTTCCATTTTTGCCAAAGCTCAAACCTTTCCTCAACCCCACCTCACATTTTCATTCTAACATGGCTTCCCTTTCCTCTGCCGCCGCCGCCGCCGTCCCGCCGCCGTTCTACATGGAGGAGAAATGGAAGCTGCCCAAGAAGGAGGCTCCGGCGAGAACCCGTTCATCATCTTCTTCTTCTTGTTCCTCTTGTCCTCTGATGAGAAATTCTTCAGAGAGGAGATGTTCTTTCACTAGAAAATGTGCCAAATTGGTTAAGGAACAGAGGGCTCGATTCTACATCATGAGGCGTTGCGTTACGATGCTCATCTGTTGGCATAACTACAGCGATTCTTGAAAATCCTCTGTTTTAGAAAGATCAGAAACAGAAACAGAATCAGAATCAGATGATTTGGGTTTTTTCTTCTTTTTTTTTTCCTATCTGCTCCATGGAAAATTGGGTGTTTGTAGGCAAAAACCCAGATGGGATTTTGCAGAGATAATATTGCAAATCCGGATCTTAGAGAGATTAGGGAAGAGATTTTTATATACTTGTAAATAGTTATAATGATGTAGTATTGGAATCTCTGATGGGTTGAGTTTAAATTTTGTTTCTTTCTTTTCATGGGTGAGATTTGTAGGGTTCTTTATTATTAACAAGCATTGATCTTTGTAACTTCTCTTCTTCCATTGTTTTTTCTCTAATCAAATGCAACTGCT

mRNA sequence

AGCTCGCTTTGGCAAAAAAAAAAAAAAATCCCATTTTTACAATCCCAGAATTTCTTTTTACAGTGGTTTAATTAGTAGACCTCCATGACGTGTGGCTTTGGAAACTCACCTCCATTATAATAATCCCTACTCGAATTAGATTCTTTATTTTCAAAAATATCATTTATATATTCACAAAATTAAAAATAAAAAAATATATAATATTATAATGGCGTATCTCTGGATGGGGAAAGGAAAGAAAAACCAGGTGTGTGATTCCCACTGCCACGCCCTTTTCTTTAACCTCTTATAAATACCATTGGAGCCTCCTTCAAAGCTTAATAATCCACTCTCTCTCTCTAAAACCTTCCATTTTTGCCAAAGCTCAAACCTTTCCTCAACCCCACCTCACATTTTCATTCTAACATGGCTTCCCTTTCCTCTGCCGCCGCCGCCGCCGTCCCGCCGCCGTTCTACATGGAGGAGAAATGGAAGCTGCCCAAGAAGGAGGCTCCGGCGAGAACCCGTTCATCATCTTCTTCTTCTTGTTCCTCTTGTCCTCTGATGAGAAATTCTTCAGAGAGGAGATGTTCTTTCACTAGAAAATGTGCCAAATTGGTTAAGGAACAGAGGGCTCGATTCTACATCATGAGGCGTTGCGTTACGATGCTCATCTGTTGGCATAACTACAGCGATTCTTGAAAATCCTCTGTTTTAGAAAGATCAGAAACAGAAACAGAATCAGAATCAGATGATTTGGGTTTTTTCTTCTTTTTTTTTTCCTATCTGCTCCATGGAAAATTGGGTGTTTGTAGGCAAAAACCCAGATGGGATTTTGCAGAGATAATATTGCAAATCCGGATCTTAGAGAGATTAGGGAAGAGATTTTTATATACTTGTAAATAGTTATAATGATGTAGTATTGGAATCTCTGATGGGTTGAGTTTAAATTTTGTTTCTTTCTTTTCATGGGTGAGATTTGTAGGGTTCTTTATTATTAACAAGCATTGATCTTTGTAACTTCTCTTCTTCCATTGTTTTTTCTCTAATCAAATGCAACTGCT

Coding sequence (CDS)

ATGGCTTCCCTTTCCTCTGCCGCCGCCGCCGCCGTCCCGCCGCCGTTCTACATGGAGGAGAAATGGAAGCTGCCCAAGAAGGAGGCTCCGGCGAGAACCCGTTCATCATCTTCTTCTTCTTGTTCCTCTTGTCCTCTGATGAGAAATTCTTCAGAGAGGAGATGTTCTTTCACTAGAAAATGTGCCAAATTGGTTAAGGAACAGAGGGCTCGATTCTACATCATGAGGCGTTGCGTTACGATGCTCATCTGTTGGCATAACTACAGCGATTCTTGA

Protein sequence

MASLSSAAAAAVPPPFYMEEKWKLPKKEAPARTRSSSSSSCSSCPLMRNSSERRCSFTRKCAKLVKEQRARFYIMRRCVTMLICWHNYSDS

Homology

[Close]

BLAST of Lcy13g008940 vs. ExPASy Swiss-Prot
Match: Q8S8S3 (Small polypeptide DEVIL 11 OS=Arabidopsis thaliana OX=3702 GN=DVL11 PE=3 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.2e-16
Identity = 55/94 (58.51%), Postives = 64/94 (68.09%), Query Frame = 0


Query: 1  MASLSSAAAAAVPPPFYMEEKWKLPKKEAPAR--TRSSSSSSCSSCPLMRNSSERRCSFT 60
          MAS SS   +      +++EKWKL KK+  A   TRSSS+SS S         + RC+FT
Sbjct: 1  MASSSSLTRSG---SVHLDEKWKLSKKDGGASRITRSSSTSSSS----FNGKKQGRCAFT 60

Query: 61 RKCAKLVKEQRARFYIMRRCVTMLICWH-NYSDS 92
          RKCA+LVKEQRARFYIMRRCV MLICW  NYSDS
Sbjct: 61 RKCARLVKEQRARFYIMRRCVIMLICWRDNYSDS 87

[Close]

BLAST of Lcy13g008940 vs. ExPASy Swiss-Prot
Match: Q8L7D0 (Small polypeptide DEVIL 13 OS=Arabidopsis thaliana OX=3702 GN=DVL13 PE=3 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 3.1e-09
Identity = 40/90 (44.44%), Postives = 53/90 (58.89%), Query Frame = 0


Query: 3   SLSSAAAAAVPPPFYMEEKWKLPKKEAPARTRSSSSSSCS-SCPLMRNSSERRCSFTRKC 62
           S S++A++   P F      K     + + + SSSS S S S    R+SS    S T+K 
Sbjct: 26  SFSTSASSTKSPIFVRSSSTKCSVPSSSSSSSSSSSISRSFSRKERRSSSSSSSSITQKY 85

Query: 63  AKLVKEQRARFYIMRRCVTMLICWHNYSDS 92
           + L KEQ+ARFYIMRRCV ML+CWH + DS
Sbjct: 86  SSLAKEQKARFYIMRRCVAMLVCWHKHGDS 115

[Close]

BLAST of Lcy13g008940 vs. ExPASy Swiss-Prot
Match: Q8LE84 (Small polypeptide DEVIL 18 OS=Arabidopsis thaliana OX=3702 GN=DVL18 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.0e-08
Identity = 33/82 (40.24%), Postives = 48/82 (58.54%), Query Frame = 0


Query: 14  PPFYMEEKWKLPKKEAPARTRSSS------SSSCSSCPLMRNSSERRCSFTRKCAKLVKE 73
           P F      K    ++P  +RS S      +SS S C + R+ S++  S TRKC  + KE
Sbjct: 60  PIFRRSFSAKPTSSKSPFLSRSGSTKCPVDTSSTSKCSISRSLSQKGASVTRKCRNMAKE 119

Query: 74  QRARFYIMRRCVTMLICWHNYS 90
            ++RFYIM+RCV ML+CWH ++
Sbjct: 120 HKSRFYIMKRCVLMLVCWHKHA 141

[Close]

BLAST of Lcy13g008940 vs. ExPASy Swiss-Prot
Match: Q6IM92 (Small polypeptide DEVIL 9 OS=Arabidopsis thaliana OX=3702 GN=DVL9 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.6e-08
Identity = 40/105 (38.10%), Postives = 51/105 (48.57%), Query Frame = 0


Query: 18  MEEKWKLPKKEAPARTRSSS--------------SSSCSSCPLMRNSSERRC-------- 77
           M+EKW+L KK+A A + SSS              S+S S  P    SS  +C        
Sbjct: 1   MDEKWRLSKKDALAASCSSSSTSSKSKFSRSFSTSASSSKAPAFVRSSSTKCSVPSSSSS 60

Query: 78  ------------SFTRKCAKLVKEQRARFYIMRRCVTMLICWHNY 89
                       S T+K + L KEQ+ RFYIMRRCV ML+CWH +
Sbjct: 61  SISRSSSKKEKGSITQKYSSLAKEQKGRFYIMRRCVAMLVCWHKH 105

[Close]

BLAST of Lcy13g008940 vs. ExPASy Swiss-Prot
Match: Q6IM93 (Small polypeptide DEVIL 8 OS=Arabidopsis thaliana OX=3702 GN=DVL8 PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 7.6e-08
Identity = 35/71 (49.30%), Postives = 46/71 (64.79%), Query Frame = 0


Query: 23 KLPKKEAPARTRSSSSSSCSSCPLMRNSSERRCSFTRKCAKLVKEQRARFYIMRRCVTML 82
          +L KKE+      + +++ SS        + +  FTRKC +LVKEQRARFYIMRRCV ML
Sbjct: 11 QLSKKESLGDNGGALNTTRSS-----RQKQGKYGFTRKCGRLVKEQRARFYIMRRCVVML 70

Query: 83 ICW--HNYSDS 92
          ICW  HN ++S
Sbjct: 71 ICWTDHNNNNS 76

[Close]

BLAST of Lcy13g008940 vs. ExPASy TrEMBL
Match: A0A5A7U4Z4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold293G00470 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 7.5e-35
Identity = 82/93 (88.17%), Postives = 85/93 (91.40%), Query Frame = 0


Query: 1  MASLSS--AAAAAVPPPFYMEEKWKLPKKEAPARTRSSSSSSCSSCPLMRNSSERRCSFT 60
          M S+SS  AAAAAVPPPFYMEEKWKLPKK APARTRSSS    SSCPLMRNSS+RRCSFT
Sbjct: 1  MTSISSAAAAAAAVPPPFYMEEKWKLPKKGAPARTRSSS----SSCPLMRNSSDRRCSFT 60

Query: 61 RKCAKLVKEQRARFYIMRRCVTMLICWHNYSDS 92
          RKCAKLVKEQRARFYIMRRCVTMLICWHNY+DS
Sbjct: 61 RKCAKLVKEQRARFYIMRRCVTMLICWHNYNDS 89

[Close]

BLAST of Lcy13g008940 vs. ExPASy TrEMBL
Match: A0A1S3CF72 (uncharacterized protein LOC103500229 OS=Cucumis melo OX=3656 GN=LOC103500229 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 7.5e-35
Identity = 82/93 (88.17%), Postives = 85/93 (91.40%), Query Frame = 0


Query: 1  MASLSS--AAAAAVPPPFYMEEKWKLPKKEAPARTRSSSSSSCSSCPLMRNSSERRCSFT 60
          M S+SS  AAAAAVPPPFYMEEKWKLPKK APARTRSSS    SSCPLMRNSS+RRCSFT
Sbjct: 1  MTSISSAAAAAAAVPPPFYMEEKWKLPKKGAPARTRSSS----SSCPLMRNSSDRRCSFT 60

Query: 61 RKCAKLVKEQRARFYIMRRCVTMLICWHNYSDS 92
          RKCAKLVKEQRARFYIMRRCVTMLICWHNY+DS
Sbjct: 61 RKCAKLVKEQRARFYIMRRCVTMLICWHNYNDS 89

[Close]

BLAST of Lcy13g008940 vs. ExPASy TrEMBL
Match: A0A0A0KQA4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G182670 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 6.4e-34
Identity = 78/90 (86.67%), Postives = 83/90 (92.22%), Query Frame = 0


Query: 2  ASLSSAAAAAVPPPFYMEEKWKLPKKEAPARTRSSSSSSCSSCPLMRNSSERRCSFTRKC 61
          +S ++AAAAAVP PFYMEEKWKLPKK APARTRSSS    SSCPLMRNSS+RRCSFTRKC
Sbjct: 6  SSAAAAAAAAVPSPFYMEEKWKLPKKGAPARTRSSS----SSCPLMRNSSDRRCSFTRKC 65

Query: 62 AKLVKEQRARFYIMRRCVTMLICWHNYSDS 92
          AKLVKEQRARFYIMRRCVTMLICWHNY+DS
Sbjct: 66 AKLVKEQRARFYIMRRCVTMLICWHNYNDS 91

[Close]

BLAST of Lcy13g008940 vs. ExPASy TrEMBL
Match: A0A6J1CBU5 (uncharacterized protein LOC111010130 OS=Momordica charantia OX=3673 GN=LOC111010130 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.6e-29
Identity = 74/91 (81.32%), Postives = 79/91 (86.81%), Query Frame = 0


Query: 1  MASLSSAAAAAVPPPFYMEEKWKLPKKEAPARTRSSSSSSCSSCPLMRNSSERRCSFTRK 60
          MAS+SSA A    PPFY+EEKWKL KKEAPAR+RSS     +S PLMRNSSERRCSFTRK
Sbjct: 1  MASVSSAVA----PPFYLEEKWKLSKKEAPARSRSS-----ASYPLMRNSSERRCSFTRK 60

Query: 61 CAKLVKEQRARFYIMRRCVTMLICWHNYSDS 92
          CAKLVKEQRARFYIMRRCVTMLICWHN+SDS
Sbjct: 61 CAKLVKEQRARFYIMRRCVTMLICWHNHSDS 82

[Close]

BLAST of Lcy13g008940 vs. ExPASy TrEMBL
Match: A0A7J6E7R9 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_012773 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 5.4e-25
Identity = 64/91 (70.33%), Postives = 75/91 (82.42%), Query Frame = 0


Query: 3   SLSSAAAAAVPPPFYMEEKWKLPKKEAPARTRSSSSSSCSSCPLMR--NSSERRCSFTRK 62
           S+S +A  + PPPFY +EKWKL KKE+ +R+RSS     SSCPL++  NSS RRCSFTRK
Sbjct: 15  SVSGSAPISAPPPFYFDEKWKLSKKESLSRSRSS-----SSCPLVKNSNSSHRRCSFTRK 74

Query: 63  CAKLVKEQRARFYIMRRCVTMLICWHNYSDS 92
           CA+LVKEQRARFYIMRRCVTMLICW +YSDS
Sbjct: 75  CARLVKEQRARFYIMRRCVTMLICWRDYSDS 100

[Close]

BLAST of Lcy13g008940 vs. NCBI nr
Match: KAG6600989.1 (hypothetical protein SDJN03_06222, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031601.1 hypothetical protein SDJN02_05642, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 162.2 bits (409), Expect = 2.2e-36
Identity = 83/91 (91.21%), Postives = 86/91 (94.51%), Query Frame = 0


Query: 1  MASLSSAAAAAVPPPFYMEEKWKLPKKEAPARTRSSSSSSCSSCPLMRNSSERRCSFTRK 60
          MAS+SS+AAAAVPPPFYMEEKWKLPKK APAR+RSSS    SSCPLMRNSSERRCSFTRK
Sbjct: 1  MASISSSAAAAVPPPFYMEEKWKLPKKGAPARSRSSS----SSCPLMRNSSERRCSFTRK 60

Query: 61 CAKLVKEQRARFYIMRRCVTMLICWHNYSDS 92
          CAKLVKEQRARFYIMRRCVTMLICWHNYSDS
Sbjct: 61 CAKLVKEQRARFYIMRRCVTMLICWHNYSDS 87

[Close]

BLAST of Lcy13g008940 vs. NCBI nr
Match: XP_008461687.1 (PREDICTED: uncharacterized protein LOC103500229 [Cucumis melo] >KAA0050338.1 uncharacterized protein E6C27_scaffold88G00650 [Cucumis melo var. makuwa] >TYK03552.1 uncharacterized protein E5676_scaffold293G00470 [Cucumis melo var. makuwa])

HSP 1 Score: 156.0 bits (393), Expect = 1.6e-34
Identity = 82/93 (88.17%), Postives = 85/93 (91.40%), Query Frame = 0


Query: 1  MASLSS--AAAAAVPPPFYMEEKWKLPKKEAPARTRSSSSSSCSSCPLMRNSSERRCSFT 60
          M S+SS  AAAAAVPPPFYMEEKWKLPKK APARTRSSS    SSCPLMRNSS+RRCSFT
Sbjct: 1  MTSISSAAAAAAAVPPPFYMEEKWKLPKKGAPARTRSSS----SSCPLMRNSSDRRCSFT 60

Query: 61 RKCAKLVKEQRARFYIMRRCVTMLICWHNYSDS 92
          RKCAKLVKEQRARFYIMRRCVTMLICWHNY+DS
Sbjct: 61 RKCAKLVKEQRARFYIMRRCVTMLICWHNYNDS 89

[Close]

BLAST of Lcy13g008940 vs. NCBI nr
Match: XP_038889639.1 (uncharacterized protein LOC120079504 [Benincasa hispida] >XP_038889640.1 uncharacterized protein LOC120079504 [Benincasa hispida] >XP_038889641.1 uncharacterized protein LOC120079504 [Benincasa hispida] >XP_038889642.1 uncharacterized protein LOC120079504 [Benincasa hispida])

HSP 1 Score: 154.1 bits (388), Expect = 5.9e-34
Identity = 78/90 (86.67%), Postives = 83/90 (92.22%), Query Frame = 0


Query: 2  ASLSSAAAAAVPPPFYMEEKWKLPKKEAPARTRSSSSSSCSSCPLMRNSSERRCSFTRKC 61
          +S ++ AAAAVPPPFYMEEKWKLPKK APAR+RSSS    SSCPLMRNSSERRCSFTRKC
Sbjct: 6  SSAAATAAAAVPPPFYMEEKWKLPKKGAPARSRSSS----SSCPLMRNSSERRCSFTRKC 65

Query: 62 AKLVKEQRARFYIMRRCVTMLICWHNYSDS 92
          AKLVKEQRARFYIMRRCVTMLICWHNY+DS
Sbjct: 66 AKLVKEQRARFYIMRRCVTMLICWHNYNDS 91

[Close]

BLAST of Lcy13g008940 vs. NCBI nr
Match: XP_022139156.1 (uncharacterized protein LOC111010130 [Momordica charantia])

HSP 1 Score: 138.3 bits (347), Expect = 3.4e-29
Identity = 74/91 (81.32%), Postives = 79/91 (86.81%), Query Frame = 0


Query: 1  MASLSSAAAAAVPPPFYMEEKWKLPKKEAPARTRSSSSSSCSSCPLMRNSSERRCSFTRK 60
          MAS+SSA A    PPFY+EEKWKL KKEAPAR+RSS     +S PLMRNSSERRCSFTRK
Sbjct: 1  MASVSSAVA----PPFYLEEKWKLSKKEAPARSRSS-----ASYPLMRNSSERRCSFTRK 60

Query: 61 CAKLVKEQRARFYIMRRCVTMLICWHNYSDS 92
          CAKLVKEQRARFYIMRRCVTMLICWHN+SDS
Sbjct: 61 CAKLVKEQRARFYIMRRCVTMLICWHNHSDS 82

[Close]

BLAST of Lcy13g008940 vs. NCBI nr
Match: KAE7996759.1 (hypothetical protein FH972_001452 [Carpinus fangiana])

HSP 1 Score: 123.2 bits (308), Expect = 1.1e-24
Identity = 62/91 (68.13%), Postives = 74/91 (81.32%), Query Frame = 0


Query: 1  MASLSSAAAAAVPPPFYMEEKWKLPKKEAPARTRSSSSSSCSSCPLMRNSSERRCSFTRK 60
          MAS+SSA  A+ PPPFY +EKWKL KKE  +R+RSS++      P M++SS RRCSF RK
Sbjct: 1  MASISSATTASGPPPFYFDEKWKLSKKEGSSRSRSSTA------PFMKSSSHRRCSFARK 60

Query: 61 CAKLVKEQRARFYIMRRCVTMLICWHNYSDS 92
          CA+LVKEQRARFYI+RRCVTMLICW +YSDS
Sbjct: 61 CARLVKEQRARFYIVRRCVTMLICWRDYSDS 85

[Close]

BLAST of Lcy13g008940 vs. TAIR 10
Match: AT2G39705.1 (ROTUNDIFOLIA like 8 )

HSP 1 Score: 87.0 bits (214), Expect = 8.3e-18
Identity = 55/94 (58.51%), Postives = 64/94 (68.09%), Query Frame = 0


Query: 1  MASLSSAAAAAVPPPFYMEEKWKLPKKEAPAR--TRSSSSSSCSSCPLMRNSSERRCSFT 60
          MAS SS   +      +++EKWKL KK+  A   TRSSS+SS S         + RC+FT
Sbjct: 1  MASSSSLTRSG---SVHLDEKWKLSKKDGGASRITRSSSTSSSS----FNGKKQGRCAFT 60

Query: 61 RKCAKLVKEQRARFYIMRRCVTMLICWH-NYSDS 92
          RKCA+LVKEQRARFYIMRRCV MLICW  NYSDS
Sbjct: 61 RKCARLVKEQRARFYIMRRCVIMLICWRDNYSDS 87

[Close]

BLAST of Lcy13g008940 vs. TAIR 10
Match: AT2G29125.1 (ROTUNDIFOLIA like 2 )

HSP 1 Score: 62.4 bits (150), Expect = 2.2e-10
Identity = 40/90 (44.44%), Postives = 53/90 (58.89%), Query Frame = 0


Query: 3   SLSSAAAAAVPPPFYMEEKWKLPKKEAPARTRSSSSSSCS-SCPLMRNSSERRCSFTRKC 62
           S S++A++   P F      K     + + + SSSS S S S    R+SS    S T+K 
Sbjct: 26  SFSTSASSTKSPIFVRSSSTKCSVPSSSSSSSSSSSISRSFSRKERRSSSSSSSSITQKY 85

Query: 63  AKLVKEQRARFYIMRRCVTMLICWHNYSDS 92
           + L KEQ+ARFYIMRRCV ML+CWH + DS
Sbjct: 86  SSLAKEQKARFYIMRRCVAMLVCWHKHGDS 115

[Close]

BLAST of Lcy13g008940 vs. TAIR 10
Match: AT5G59510.1 (ROTUNDIFOLIA like 5 )

HSP 1 Score: 59.7 bits (143), Expect = 1.4e-09
Identity = 33/82 (40.24%), Postives = 48/82 (58.54%), Query Frame = 0


Query: 14  PPFYMEEKWKLPKKEAPARTRSSS------SSSCSSCPLMRNSSERRCSFTRKCAKLVKE 73
           P F      K    ++P  +RS S      +SS S C + R+ S++  S TRKC  + KE
Sbjct: 60  PIFRRSFSAKPTSSKSPFLSRSGSTKCPVDTSSTSKCSISRSLSQKGASVTRKCRNMAKE 119

Query: 74  QRARFYIMRRCVTMLICWHNYS 90
            ++RFYIM+RCV ML+CWH ++
Sbjct: 120 HKSRFYIMKRCVLMLVCWHKHA 141

[Close]

BLAST of Lcy13g008940 vs. TAIR 10
Match: AT1G07490.1 (ROTUNDIFOLIA like 3 )

HSP 1 Score: 59.3 bits (142), Expect = 1.8e-09
Identity = 40/105 (38.10%), Postives = 51/105 (48.57%), Query Frame = 0


Query: 18  MEEKWKLPKKEAPARTRSSS--------------SSSCSSCPLMRNSSERRC-------- 77
           M+EKW+L KK+A A + SSS              S+S S  P    SS  +C        
Sbjct: 1   MDEKWRLSKKDALAASCSSSSTSSKSKFSRSFSTSASSSKAPAFVRSSSTKCSVPSSSSS 60

Query: 78  ------------SFTRKCAKLVKEQRARFYIMRRCVTMLICWHNY 89
                       S T+K + L KEQ+ RFYIMRRCV ML+CWH +
Sbjct: 61  SISRSSSKKEKGSITQKYSSLAKEQKGRFYIMRRCVAMLVCWHKH 105

[Close]

BLAST of Lcy13g008940 vs. TAIR 10
Match: AT3G55515.1 (ROTUNDIFOLIA like 7 )

HSP 1 Score: 57.8 bits (138), Expect = 5.4e-09
Identity = 35/71 (49.30%), Postives = 46/71 (64.79%), Query Frame = 0


Query: 23 KLPKKEAPARTRSSSSSSCSSCPLMRNSSERRCSFTRKCAKLVKEQRARFYIMRRCVTML 82
          +L KKE+      + +++ SS        + +  FTRKC +LVKEQRARFYIMRRCV ML
Sbjct: 11 QLSKKESLGDNGGALNTTRSS-----RQKQGKYGFTRKCGRLVKEQRARFYIMRRCVVML 70

Query: 83 ICW--HNYSDS 92
          ICW  HN ++S
Sbjct: 71 ICWTDHNNNNS 76

The following BLAST results are available for this feature:

BLAST of Lcy13g008940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S8S3	1.2e-16	58.51	Small polypeptide DEVIL 11 OS=Arabidopsis thaliana OX=3702 GN=DVL11 PE=3 SV=1	[more]
Q8L7D0	3.1e-09	44.44	Small polypeptide DEVIL 13 OS=Arabidopsis thaliana OX=3702 GN=DVL13 PE=3 SV=1	[more]
Q8LE84	2.0e-08	40.24	Small polypeptide DEVIL 18 OS=Arabidopsis thaliana OX=3702 GN=DVL18 PE=2 SV=1	[more]
Q6IM92	2.6e-08	38.10	Small polypeptide DEVIL 9 OS=Arabidopsis thaliana OX=3702 GN=DVL9 PE=1 SV=1	[more]
Q6IM93	7.6e-08	49.30	Small polypeptide DEVIL 8 OS=Arabidopsis thaliana OX=3702 GN=DVL8 PE=3 SV=1	[more]

BLAST of Lcy13g008940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U4Z4	7.5e-35	88.17	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CF72	7.5e-35	88.17	uncharacterized protein LOC103500229 OS=Cucumis melo OX=3656 GN=LOC103500229 PE=...	[more]
A0A0A0KQA4	6.4e-34	86.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G182670 PE=4 SV=1	[more]
A0A6J1CBU5	1.6e-29	81.32	uncharacterized protein LOC111010130 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A7J6E7R9	5.4e-25	70.33	Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_012773 PE=4 SV=1	[more]

BLAST of Lcy13g008940 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6600989.1	2.2e-36	91.21	hypothetical protein SDJN03_06222, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_008461687.1	1.6e-34	88.17	PREDICTED: uncharacterized protein LOC103500229 [Cucumis melo] >KAA0050338.1 unc...	[more]
XP_038889639.1	5.9e-34	86.67	uncharacterized protein LOC120079504 [Benincasa hispida] >XP_038889640.1 unchara...	[more]
XP_022139156.1	3.4e-29	81.32	uncharacterized protein LOC111010130 [Momordica charantia]	[more]
KAE7996759.1	1.1e-24	68.13	hypothetical protein FH972_001452 [Carpinus fangiana]	[more]

BLAST of Lcy13g008940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39705.1	8.3e-18	58.51	ROTUNDIFOLIA like 8	[more]
AT2G29125.1	2.2e-10	44.44	ROTUNDIFOLIA like 2	[more]
AT5G59510.1	1.4e-09	40.24	ROTUNDIFOLIA like 5	[more]
AT1G07490.1	1.8e-09	38.10	ROTUNDIFOLIA like 3	[more]
AT3G55515.1	5.4e-09	49.30	ROTUNDIFOLIA like 7	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012552	DVL	PFAM	PF08137	DVL	coord: 66..84 e-value: 2.5E-12 score: 46.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..48
None	No IPR available	PANTHER	PTHR33102:SF51	ROTUNDIFOLIA-LIKE PROTEIN	coord: 13..91
None	No IPR available	PANTHER	PTHR33102	DVL19-RELATED-RELATED	coord: 13..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy13g008940.1	Lcy13g008940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008285	negative regulation of cell population proliferation
biological_process	GO:0048367	shoot system development
cellular_component	GO:0005886	plasma membrane