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Lcy13g008380 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTAAGTTCAACTATTAATTTTAGCAAAAAGTAATTAAAAATCTAAACCCTCTAATTTTAACAAAAATCAAAATTGGCAAAAATAAAATTAAGCTTGCCTTGACGATGGAAAAAATCTTTTTGAACTCACAATTTAAAAAATATATATATATATAATATCAACTAGAAACAAGTTTCTTTAAAGCTTCATTCATTTAAAAACACTTATTTTAGGTTATTGCAACATTTTCGTTGACCATCTTTCGAATTAAAATCTATCAAATGTTAAATTTTACAAGGGTTAAAATCAATTATGGGAGAGTTCCAACGGCCTAATAAGTTTGGTAAAACTAATTATTTAATTAACTAATTTAAAATTACTTTTCAATATTGCAAAATCATGTTTGAAATAGTTTTTTTTTTTTTTTTTACAACATGTAGAGGTGGGGGATTGAACCTCTGACCTTTTGGTCGATGATAAATGTCAATTACCGGAGCTATGCTCACTTTGGCATGTTTGAAATAGCTGTTGAAACCGACTTTCTAAAAATTTGCATCTTCTCTACCAAAAATTTTTAAATTCCAGTTCTATCCTTCTAAATATGTTCATATTTTTTTTTTTTTGGTAAATTACAAAAACCACTCTTAATTATTGTAATTTCATAGAATTTTTTCAACTTTCTTATTGTTAAAAATTGGAGCCATTTAGATTAAAAAAAATAGAAGAAAAGTTTTAATGTTAGAAAAATACTTTTTATTATTTTTTTTTTCTTTTTTGACTTATGTCATATATCTCTTTCTTTCCCTACTCTGTCTTCTTCTTCTAAACCTTAATTTTTAATATTTTAATTTTGGCATCAACAACATGCATAATAAGTCTCCATAAGTCAACACGGATTAATTCTTTCAATTCTTTTATTTTTATCATCATACTTGCATCTTTTCAAGATCTCTAATTTGAATGTAATCTCGTTGTTGGGCAGCTCGGTCCGGCAGGTTTCTTTGGGATGGCAATGTCCCCCGGCGGGTTGGGTTAAGGTGAATGTCGACGCTGCATGTACTGGGAATGTTGGAGGTACAGGAGTGGGGGTGATCGTTCGGGATGGAAAGGGGAAAATATTGGCAGAATTGACAAATCAGCTCCCCGTGGCTTTTTCTCCTCTTTTAGCTGAGGCGTCTGCCATGCTTGATGGTCTGAGGTTGGCGCAGCGGCTTGGGTTGGACAATGTCGTTTTGGAGTCTGATTGTCTTTCTTTGGTCACTTTGTTGAGTGGCTCAGTGTCTCCTTTGAATGAACTTGGCACGCTGATTGAGGATATCCGATCGGTGGCGCTACAGCTACATGATTTTTGGTTCCAACATGTGAAGCGGGATGGTAATGTTCCTGCTCGCTGTTTGGCTAAGTAA ATGCTAAGTTCAACTATTAATTTTAGCAAAAACTCGGTCCGGCAGGTTTCTTTGGGATGGCAATGTCCCCCGGCGGGTTGGGTTAAGGTGAATGTCGACGCTGCATGTACTGGGAATGTTGGAGGTACAGGAGTGGGGGTGATCGTTCGGGATGGAAAGGGGAAAATATTGGCAGAATTGACAAATCAGCTCCCCGTGGCTTTTTCTCCTCTTTTAGCTGAGGCGTCTGCCATGCTTGATGGTCTGAGGTTGGCGCAGCGGCTTGGGTTGGACAATGTCGTTTTGGAGTCTGATTGTCTTTCTTTGGTCACTTTGTTGAGTGGCTCAGTGTCTCCTTTGAATGAACTTGGCACGCTGATTGAGGATATCCGATCGGTGGCGCTACAGCTACATGATTTTTGGTTCCAACATGTGAAGCGGGATGGTAATGTTCCTGCTCGCTGTTTGGCTAAGTAA ATGCTAAGTTCAACTATTAATTTTAGCAAAAACTCGGTCCGGCAGGTTTCTTTGGGATGGCAATGTCCCCCGGCGGGTTGGGTTAAGGTGAATGTCGACGCTGCATGTACTGGGAATGTTGGAGGTACAGGAGTGGGGGTGATCGTTCGGGATGGAAAGGGGAAAATATTGGCAGAATTGACAAATCAGCTCCCCGTGGCTTTTTCTCCTCTTTTAGCTGAGGCGTCTGCCATGCTTGATGGTCTGAGGTTGGCGCAGCGGCTTGGGTTGGACAATGTCGTTTTGGAGTCTGATTGTCTTTCTTTGGTCACTTTGTTGAGTGGCTCAGTGTCTCCTTTGAATGAACTTGGCACGCTGATTGAGGATATCCGATCGGTGGCGCTACAGCTACATGATTTTTGGTTCCAACATGTGAAGCGGGATGGTAATGTTCCTGCTCGCTGTTTGGCTAAGTAA MLSSTINFSKNSVRQVSLGWQCPPAGWVKVNVDAACTGNVGGTGVGVIVRDGKGKILAELTNQLPVAFSPLLAEASAMLDGLRLAQRLGLDNVVLESDCLSLVTLLSGSVSPLNELGTLIEDIRSVALQLHDFWFQHVKRDGNVPARCLAK Homology
BLAST of Lcy13g008380 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 6.5e-04 Identity = 33/103 (32.04%), Postives = 45/103 (43.69%), Query Frame = 0
BLAST of Lcy13g008380 vs. ExPASy TrEMBL
Match: A0A2I4DVZ3 (uncharacterized protein LOC108983971 OS=Juglans regia OX=51240 GN=LOC108983971 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 9.0e-17 Identity = 53/146 (36.30%), Postives = 81/146 (55.48%), Query Frame = 0
BLAST of Lcy13g008380 vs. ExPASy TrEMBL
Match: A0A2I4FLN6 (uncharacterized protein LOC109000195 OS=Juglans regia OX=51240 GN=LOC109000195 PE=4 SV=2) HSP 1 Score: 96.3 bits (238), Expect = 1.2e-16 Identity = 51/132 (38.64%), Postives = 77/132 (58.33%), Query Frame = 0
BLAST of Lcy13g008380 vs. ExPASy TrEMBL
Match: A0A4Q3DBE2 (Reverse transcriptase-like protein (Fragment) OS=Rickettsiaceae bacterium OX=2023360 GN=EOP33_09975 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 1.2e-16 Identity = 54/132 (40.91%), Postives = 75/132 (56.82%), Query Frame = 0
BLAST of Lcy13g008380 vs. ExPASy TrEMBL
Match: A0A6J1CNR4 (uncharacterized protein LOC111012950 OS=Momordica charantia OX=3673 GN=LOC111012950 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 4.5e-16 Identity = 53/127 (41.73%), Postives = 77/127 (60.63%), Query Frame = 0
BLAST of Lcy13g008380 vs. ExPASy TrEMBL
Match: A0A0D9YAJ6 (RNase H domain-containing protein OS=Oryza glumipatula OX=40148 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 4.5e-16 Identity = 53/149 (35.57%), Postives = 78/149 (52.35%), Query Frame = 0
BLAST of Lcy13g008380 vs. NCBI nr
Match: XP_021756867.1 (uncharacterized protein LOC110721940 [Chenopodium quinoa]) HSP 1 Score: 107.8 bits (268), Expect = 8.1e-20 Identity = 59/138 (42.75%), Postives = 88/138 (63.77%), Query Frame = 0
BLAST of Lcy13g008380 vs. NCBI nr
Match: XP_023893347.1 (uncharacterized protein LOC112005329 [Quercus suber]) HSP 1 Score: 105.9 bits (263), Expect = 3.1e-19 Identity = 60/152 (39.47%), Postives = 84/152 (55.26%), Query Frame = 0
BLAST of Lcy13g008380 vs. NCBI nr
Match: XP_010686484.1 (PREDICTED: uncharacterized protein LOC104900691 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 104.8 bits (260), Expect = 6.8e-19 Identity = 58/132 (43.94%), Postives = 78/132 (59.09%), Query Frame = 0
BLAST of Lcy13g008380 vs. NCBI nr
Match: XP_023923041.1 (uncharacterized protein LOC112034451 [Quercus suber]) HSP 1 Score: 101.3 bits (251), Expect = 7.6e-18 Identity = 51/135 (37.78%), Postives = 73/135 (54.07%), Query Frame = 0
BLAST of Lcy13g008380 vs. NCBI nr
Match: XP_021755004.1 (uncharacterized protein LOC110720310 [Chenopodium quinoa]) HSP 1 Score: 101.3 bits (251), Expect = 7.6e-18 Identity = 56/132 (42.42%), Postives = 80/132 (60.61%), Query Frame = 0
BLAST of Lcy13g008380 vs. TAIR 10
Match: AT2G13980.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 62.4 bits (150), Expect = 3.6e-10 Identity = 46/132 (34.85%), Postives = 64/132 (48.48%), Query Frame = 0
BLAST of Lcy13g008380 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 60.8 bits (146), Expect = 1.1e-09 Identity = 45/140 (32.14%), Postives = 71/140 (50.71%), Query Frame = 0
BLAST of Lcy13g008380 vs. TAIR 10
Match: AT4G09490.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 47.8 bits (112), Expect = 9.2e-06 Identity = 39/129 (30.23%), Postives = 58/129 (44.96%), Query Frame = 0
BLAST of Lcy13g008380 vs. TAIR 10
Match: AT5G42905.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 44.7 bits (104), Expect = 7.8e-05 Identity = 33/103 (32.04%), Postives = 46/103 (44.66%), Query Frame = 0
BLAST of Lcy13g008380 vs. TAIR 10
Match: AT1G10000.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 41.6 bits (96), Expect = 6.6e-04 Identity = 30/83 (36.14%), Postives = 46/83 (55.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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