Homology
BLAST of Lcy13g008360 vs. ExPASy Swiss-Prot
Match:
P0C8Q7 (Pentatricopeptide repeat-containing protein At5g08305 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E105 PE=2 SV=1)
HSP 1 Score: 624.4 bits (1609), Expect = 1.2e-177
Identity = 295/500 (59.00%), Postives = 395/500 (79.00%), Query Frame = 0
Query: 9 LLDRCKSMAELKTIHALLFTFGLSQDDAIVSKLLSFSALSPAGDPDYSYKLLLNLPNPTT 68
L +CKSM+EL IH LL T GLS+++ VS+ LSFSALS +GD DY+YK L L +P
Sbjct: 14 LRHQCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPN 73
Query: 69 FNWNTLIRGFSNTRNPNRSITVFVKMLRNGVSPDYLTYPFLAKASAKLLNRQLGMAVHVH 128
+ WN +IRGFSN+RNP +SI+V+++MLR G+ PD++TYPFL K+S++L NR+LG ++H
Sbjct: 74 YGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCS 133
Query: 129 VAKTGHEVDRFVQNSLIHMYASCGDIASARKVFDEMPTKNLVSWNAMLDGYAKCGDVNTA 188
V K+G E D F+ N+LIHMY S D ASARK+FDEMP KNLV+WN++LD YAK GDV +A
Sbjct: 134 VVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSA 193
Query: 189 REVFDLMPDKDVVSWSSLIDGYVKGGEYGEAMALFER-MRFAGPMANEVTLVSALCACAH 248
R VFD M ++DVV+WSS+IDGYVK GEY +A+ +F++ MR ANEVT+VS +CACAH
Sbjct: 194 RLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAH 253
Query: 249 LGALEQGRMMHHYIVENELPLTIVLQTSLVDMYAKCGAVHEALAVFRSCSLQRTDVLIWN 308
LGAL +G+ +H YI++ LPLT++LQTSL+DMYAKCG++ +A +VF S++ TD L+WN
Sbjct: 254 LGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWN 313
Query: 309 AIIGGLATHGLIKESIDLFSEMQMVGIVPDEITYLCLLSCCAHGGLVKEAWYFFDCLHKH 368
AIIGGLA+HG I+ES+ LF +M+ I PDEIT+LCLL+ C+HGGLVKEAW+FF L +
Sbjct: 314 AIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKES 373
Query: 369 GMTPKVEHYACMVDVLSRAGQVSEAYQFLCQMPVQPTSSMLGAILSGCMKYGKLDLAEVV 428
G PK EHYACMVDVLSRAG V +A+ F+ +MP++PT SMLGA+L+GC+ +G L+LAE V
Sbjct: 374 GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETV 433
Query: 429 GRRLVALDPDHDGRYVGLSNIYAVDKRWDDARNIREAMEKRGVKKSPGFSFVEVFGILHR 488
G++L+ L P +DGRYVGL+N+YA++K++ AR++REAMEK+GVKK G S +++ G HR
Sbjct: 434 GKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHR 493
Query: 489 FIAHDKTHGDSEQIYMMLNL 508
FIAHDKTH S++IY +L L
Sbjct: 494 FIAHDKTHFHSDKIYAVLQL 513
BLAST of Lcy13g008360 vs. ExPASy Swiss-Prot
Match:
Q9FG16 (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H88 PE=3 SV=1)
HSP 1 Score: 407.5 bits (1046), Expect = 2.3e-112
Identity = 204/529 (38.56%), Postives = 334/529 (63.14%), Query Frame = 0
Query: 7 ISLLDRCKSMAELKTIHALLFTFGLSQDDAIVSKLLSF-----SALSPAGDPDYSYKLLL 66
++LL C S ++LK IH L L D + S+LL+ + P Y+Y +
Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75
Query: 67 NLPNPTTFNWNTLIRGFSNTRNPNRSITVFVKMLRNGVSPDYLTYPFLAKASAKLLNRQL 126
+ NP F +N LIR FS P+++ + +ML++ + PD +T+PFL KAS+++ +
Sbjct: 76 QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLV 135
Query: 127 GMAVHVHVAKTGHEVDRFVQNSLIHMYASCGDIASARKVFDEMPTKNLVSWNAMLDGYAK 186
G H + + G + D +V+NSL+HMYA+CG IA+A ++F +M +++VSW +M+ GY K
Sbjct: 136 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCK 195
Query: 187 CGDVNTAREVFDLMPDKDVVSWSSLIDGYVKGGEYGEAMALFERMRFAGPMANEVTLVSA 246
CG V ARE+FD MP +++ +WS +I+GY K + +A+ LFE M+ G +ANE +VS
Sbjct: 196 CGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSV 255
Query: 247 LCACAHLGALEQGRMMHHYIVENELPLTIVLQTSLVDMYAKCGAVHEALAVFRSCSLQRT 306
+ +CAHLGALE G + Y+V++ + + ++L T+LVDM+ +CG + +A+ VF L T
Sbjct: 256 ISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFE--GLPET 315
Query: 307 DVLIWNAIIGGLATHGLIKESIDLFSEMQMVGIVPDEITYLCLLSCCAHGGLVKEAWYFF 366
D L W++II GLA HG +++ FS+M +G +P ++T+ +LS C+HGGLV++ +
Sbjct: 316 DSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIY 375
Query: 367 DCLHK-HGMTPKVEHYACMVDVLSRAGQVSEAYQFLCQMPVQPTSSMLGAILSGCMKYGK 426
+ + K HG+ P++EHY C+VD+L RAG+++EA F+ +M V+P + +LGA+L C Y
Sbjct: 376 ENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKN 435
Query: 427 LDLAEVVGRRLVALDPDHDGRYVGLSNIYAVDKRWDDARNIREAMEKRGVKKSPGFSFVE 486
++AE VG L+ + P+H G YV LSNIYA +WD ++R+ M+++ VKK PG+S +E
Sbjct: 436 TEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIE 495
Query: 487 VFGILHRF-IAHDKTHGDSEQIYMMLNLIIDQMKPIKYSENQ-DYYLDV 528
+ G +++F + D+ H + +I I+ +++ I Y N D + DV
Sbjct: 496 IDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDV 542
BLAST of Lcy13g008360 vs. ExPASy Swiss-Prot
Match:
Q9SJZ3 (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E28 PE=2 SV=1)
HSP 1 Score: 385.6 bits (989), Expect = 9.2e-106
Identity = 221/613 (36.05%), Postives = 322/613 (52.53%), Query Frame = 0
Query: 6 LISLLDRCKSMAELKTIHALLFTFGLSQDDAIVSKLLSFSALSPAGDPDYSYKLLLNLPN 65
L+SLL++CK + LK I A + GL D S+L++F ALS + DYS K+L + N
Sbjct: 56 LLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIEN 115
Query: 66 PTTFNWNTLIRGFSNTRNPNRSITVFVKMLRNGV---SPDYLTYPFLAKASAKLLNRQLG 125
P F+WN IRGFS + NP S ++ +MLR+G PD+ TYP L K A L LG
Sbjct: 116 PNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLG 175
Query: 126 MAVHVHVAKTGHEVDRFVQNSLIHMYASCGDIASARKVFDEMPTKNLVSWNAMLDGY--- 185
+ HV K E+ V N+ IHM+ASCGD+ +ARKVFDE P ++LVSWN +++GY
Sbjct: 176 HMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKI 235
Query: 186 ------------------------------------------------------------ 245
Sbjct: 236 GEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLV 295
Query: 246 -------AKCGDVNTAREVFDLMPDKDVVSWSSLIDGYVKGG------------------ 305
+KCGD++ AR +FD + + +VSW+++I GY + G
Sbjct: 296 NALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVV 355
Query: 306 -------------EYGEAMALFERMRFAGPMANEVTLVSALCACAHLGALEQGRMMHHYI 365
+A+ALF+ M+ + +E+T++ L AC+ LGAL+ G +H YI
Sbjct: 356 LWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYI 415
Query: 366 VENELPLTIVLQTSLVDMYAKCGAVHEALAVFRSCSLQRTDVLIWNAIIGGLATHGLIKE 425
+ L L + L TSLVDMYAKCG + EAL+VF +Q + L + AIIGGLA HG
Sbjct: 416 EKYSLSLNVALGTSLVDMYAKCGNISEALSVFH--GIQTRNSLTYTAIIGGLALHGDAST 475
Query: 426 SIDLFSEMQMVGIVPDEITYLCLLSCCAHGGLVKEAW-YFFDCLHKHGMTPKVEHYACMV 485
+I F+EM GI PDEIT++ LLS C HGG+++ YF + + P+++HY+ MV
Sbjct: 476 AISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMV 535
Query: 486 DVLSRAGQVSEAYQFLCQMPVQPTSSMLGAILSGCMKYGKLDLAEVVGRRLVALDPDHDG 514
D+L RAG + EA + + MP++ +++ GA+L GC +G ++L E ++L+ LDP G
Sbjct: 536 DLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSG 595
BLAST of Lcy13g008360 vs. ExPASy Swiss-Prot
Match:
Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)
HSP 1 Score: 382.1 bits (980), Expect = 1.0e-104
Identity = 195/497 (39.24%), Postives = 301/497 (60.56%), Query Frame = 0
Query: 7 ISLLDRCKSMAELKTIHALLFTFGLSQDDAIVSKLLSFSALSPAGD-PDYSYKLLLNLPN 66
+S L RC ELK IHA + GL QD ++K LSF S + D Y+ +
Sbjct: 18 MSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDR 77
Query: 67 PTTFNWNTLIRGFSNTRNPNRSITVFVKMLRNGVSPDYLTYPFLAKASAKLLNRQLGMAV 126
P TF WN +IRGFS + P RS+ ++ +ML + + T+P L KA + L + +
Sbjct: 78 PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQI 137
Query: 127 HVHVAKTGHEVDRFVQNSLIHMYASCGDIASARKVFDEMPTKNLVSWNAMLDGYAKCGDV 186
H + K G+E D + NSLI+ YA G+ A +FD +P + VSWN+++ GY K G +
Sbjct: 138 HAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKM 197
Query: 187 NTAREVFDLMPDKDVVSWSSLIDGYVKGGEYGEAMALFERMRFAGPMANEVTLVSALCAC 246
+ A +F M +K+ +SW+++I GYV+ EA+ LF M+ + + V+L +AL AC
Sbjct: 198 DIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSAC 257
Query: 247 AHLGALEQGRMMHHYIVENELPLTIVLQTSLVDMYAKCGAVHEALAVFRSCSLQRTDVLI 306
A LGALEQG+ +H Y+ + + + VL L+DMYAKCG + EAL VF+ ++++ V
Sbjct: 258 AQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFK--NIKKKSVQA 317
Query: 307 WNAIIGGLATHGLIKESIDLFSEMQMVGIVPDEITYLCLLSCCAHGGLVKEAWYFFDCLH 366
W A+I G A HG +E+I F EMQ +GI P+ IT+ +L+ C++ GLV+E F +
Sbjct: 318 WTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSME 377
Query: 367 K-HGMTPKVEHYACMVDVLSRAGQVSEAYQFLCQMPVQPTSSMLGAILSGCMKYGKLDLA 426
+ + + P +EHY C+VD+L RAG + EA +F+ +MP++P + + GA+L C + ++L
Sbjct: 378 RDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELG 437
Query: 427 EVVGRRLVALDPDHDGRYVGLSNIYAVDKRWDDARNIREAMEKRGVKKSPGFSFVEVFGI 486
E +G L+A+DP H GRYV +NI+A+DK+WD A R M+++GV K PG S + + G
Sbjct: 438 EEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGT 497
Query: 487 LHRFIAHDKTHGDSEQI 502
H F+A D++H + E+I
Sbjct: 498 THEFLAGDRSHPEIEKI 512
BLAST of Lcy13g008360 vs. ExPASy Swiss-Prot
Match:
Q683I9 (Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H82 PE=2 SV=1)
HSP 1 Score: 368.6 bits (945), Expect = 1.2e-100
Identity = 191/472 (40.47%), Postives = 297/472 (62.92%), Query Frame = 0
Query: 68 TFNWNTLIRGF-SNTRNPNR--SITVFVKMLRNGVSPDYLTYPFLAKASAKLLNRQLGMA 127
+F WN +IR N +P R I+V+++M + VSPD+ T+PFL + L+ LG
Sbjct: 24 SFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQR 83
Query: 128 VHVHVAKTGHEVDRFVQNSLIHMYASCGDIASARKVFDEMPTKNLVSWNAMLDGYAKCGD 187
H + G + D FV+ SL++MY+SCGD+ SA++VFD+ +K+L +WN++++ YAK G
Sbjct: 84 THAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGL 143
Query: 188 VNTAREVFDLMPDKDVVSWSSLIDGYVKGGEYGEAMALFERMRFAGP-----MANEVTLV 247
++ AR++FD MP+++V+SWS LI+GYV G+Y EA+ LF M+ P NE T+
Sbjct: 144 IDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMS 203
Query: 248 SALCACAHLGALEQGRMMHHYIVENELPLTIVLQTSLVDMYAKCGAVHEALAVFRSCSLQ 307
+ L AC LGALEQG+ +H YI + + + IVL T+L+DMYAKCG++ A VF +
Sbjct: 204 TVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALG-S 263
Query: 308 RTDVLIWNAIIGGLATHGLIKESIDLFSEMQMV-GIVPDEITYLCLLSCCAHGGLVKEA- 367
+ DV ++A+I LA +GL E LFSEM I P+ +T++ +L C H GL+ E
Sbjct: 264 KKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGK 323
Query: 368 WYFFDCLHKHGMTPKVEHYACMVDVLSRAGQVSEAYQFLCQMPVQPTSSMLGAILSGCMK 427
YF + + G+TP ++HY CMVD+ R+G + EA F+ MP++P + G++LSG
Sbjct: 324 SYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRM 383
Query: 428 YGKLDLAEVVGRRLVALDPDHDGRYVGLSNIYAVDKRWDDARNIREAMEKRGVKKSPGFS 487
G + E +RL+ LDP + G YV LSN+YA RW + + IR ME +G+ K PG S
Sbjct: 384 LGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCS 443
Query: 488 FVEVFGILHRFIAHDKTHGDSEQIYMMLNLIIDQMKPIKY-SENQDYYLDVS 529
+VEV G++H F+ D++ +SE+IY ML+ I+ +++ Y ++ ++ LD++
Sbjct: 444 YVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLN 494
BLAST of Lcy13g008360 vs. ExPASy TrEMBL
Match:
A0A6J1FWL8 (pentatricopeptide repeat-containing protein At5g08305 OS=Cucurbita moschata OX=3662 GN=LOC111447594 PE=4 SV=1)
HSP 1 Score: 971.5 bits (2510), Expect = 1.4e-279
Identity = 472/522 (90.42%), Postives = 497/522 (95.21%), Query Frame = 0
Query: 1 MQNQTLISLLDRCKSMAELKTIHALLFTFGLSQDDAIVSKLLSFSALSPAGDPDYSYKLL 60
M +LISLLD+CKSM+EL+ IHALLFTFG SQDDA+VSKLLSFSALSPAGD DYSYKLL
Sbjct: 2 MNASSLISLLDKCKSMSELRRIHALLFTFGASQDDAVVSKLLSFSALSPAGDLDYSYKLL 61
Query: 61 LNLPNPTTFNWNTLIRGFSNTRNPNRSITVFVKMLRNGVSPDYLTYPFLAKASAKLLNRQ 120
LNLPNPTTF WNTLIRGFSN+RNPNRSITVFV+MLRNGVSPDY+TYPFL KA+AKLLNR+
Sbjct: 62 LNLPNPTTFKWNTLIRGFSNSRNPNRSITVFVRMLRNGVSPDYMTYPFLGKATAKLLNRK 121
Query: 121 LGMAVHVHVAKTGHEVDRFVQNSLIHMYASCGDIASARKVFDEMPTKNLVSWNAMLDGYA 180
LGMAVHVHVAKTGHEVDRFV NSLIHMYASCGDIA ARKVFDEMPTKNLVSWNAMLDGYA
Sbjct: 122 LGMAVHVHVAKTGHEVDRFVMNSLIHMYASCGDIALARKVFDEMPTKNLVSWNAMLDGYA 181
Query: 181 KCGDVNTAREVFDLMPDKDVVSWSSLIDGYVKGGEYGEAMALFERMRFAGPMANEVTLVS 240
KCGDVNTAREVFDLM ++DVVSWSSLIDGYVK GEYGEAM+LFERMR AGPMANEVTLVS
Sbjct: 182 KCGDVNTAREVFDLMHERDVVSWSSLIDGYVKCGEYGEAMSLFERMRSAGPMANEVTLVS 241
Query: 241 ALCACAHLGALEQGRMMHHYIVENELPLTIVLQTSLVDMYAKCGAVHEALAVFRSCSLQR 300
LCACAHLGALEQGRMMH YIVENELP TIVL TSLVDMYAKCGA+HEALA FR+C LQR
Sbjct: 242 VLCACAHLGALEQGRMMHGYIVENELPFTIVLLTSLVDMYAKCGAIHEALAAFRACPLQR 301
Query: 301 TDVLIWNAIIGGLATHGLIKESIDLFSEMQMVGIVPDEITYLCLLSCCAHGGLVKEAWYF 360
TDVLIWNAIIGGLATHGLIKES+DLFSEMQMVGI PDEITYLCLLSCCAHGGLV EAWYF
Sbjct: 302 TDVLIWNAIIGGLATHGLIKESMDLFSEMQMVGIAPDEITYLCLLSCCAHGGLVNEAWYF 361
Query: 361 FDCLHKHGMTPKVEHYACMVDVLSRAGQVSEAYQFLCQMPVQPTSSMLGAILSGCMKYGK 420
FDCLHKHGMTPKVEHYACMVD LSRAGQVSEAYQFLCQM VQPTSSMLGA+LSGCMK+GK
Sbjct: 362 FDCLHKHGMTPKVEHYACMVDALSRAGQVSEAYQFLCQMTVQPTSSMLGALLSGCMKHGK 421
Query: 421 LDLAEVVGRRLVALDPDHDGRYVGLSNIYAVDKRWDDARNIREAMEKRGVKKSPGFSFVE 480
LDLAEVVGRRLV LDPDHDGRYVGLSNIYAVDKRW+DARNIREAME+RGVKKSPGFSFVE
Sbjct: 422 LDLAEVVGRRLVELDPDHDGRYVGLSNIYAVDKRWNDARNIREAMERRGVKKSPGFSFVE 481
Query: 481 VFGILHRFIAHDKTHGDSEQIYMMLNLIIDQMKPIKYSENQD 523
VFGILHRFIAHDKTHGDSE+IY+MLNLIIDQM+PI+ SENQ+
Sbjct: 482 VFGILHRFIAHDKTHGDSERIYVMLNLIIDQMRPIEDSENQE 523
BLAST of Lcy13g008360 vs. ExPASy TrEMBL
Match:
A0A6J1JFS5 (pentatricopeptide repeat-containing protein At5g08305 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485339 PE=4 SV=1)
HSP 1 Score: 967.6 bits (2500), Expect = 2.1e-278
Identity = 469/522 (89.85%), Postives = 497/522 (95.21%), Query Frame = 0
Query: 1 MQNQTLISLLDRCKSMAELKTIHALLFTFGLSQDDAIVSKLLSFSALSPAGDPDYSYKLL 60
M+ +L SLLD+CKSM+EL+ IHALLFTFG+SQDDA+VSKLLSFSALSPAGD DYSYKLL
Sbjct: 3 MKASSLTSLLDKCKSMSELRRIHALLFTFGVSQDDAVVSKLLSFSALSPAGDLDYSYKLL 62
Query: 61 LNLPNPTTFNWNTLIRGFSNTRNPNRSITVFVKMLRNGVSPDYLTYPFLAKASAKLLNRQ 120
LNLPNPTTF WNTLIRGFSN+RNPNRSITVFV+MLRNGVSPDY+TYPFL KA+AKLLNR+
Sbjct: 63 LNLPNPTTFKWNTLIRGFSNSRNPNRSITVFVRMLRNGVSPDYMTYPFLGKATAKLLNRK 122
Query: 121 LGMAVHVHVAKTGHEVDRFVQNSLIHMYASCGDIASARKVFDEMPTKNLVSWNAMLDGYA 180
LGMAVHVHVAKTGHEVDRFV NSLIHMYASCGDIA ARKVFDEMPTKNLVSWNAMLDGYA
Sbjct: 123 LGMAVHVHVAKTGHEVDRFVMNSLIHMYASCGDIAFARKVFDEMPTKNLVSWNAMLDGYA 182
Query: 181 KCGDVNTAREVFDLMPDKDVVSWSSLIDGYVKGGEYGEAMALFERMRFAGPMANEVTLVS 240
KC DVNTAREVFDLM ++DVVSWSSLIDGYVK GEYGEAMALFE MR AGPMANEVTLVS
Sbjct: 183 KCRDVNTAREVFDLMHERDVVSWSSLIDGYVKCGEYGEAMALFEHMRSAGPMANEVTLVS 242
Query: 241 ALCACAHLGALEQGRMMHHYIVENELPLTIVLQTSLVDMYAKCGAVHEALAVFRSCSLQR 300
LCACAHLGALEQGRMMH YIVENELPLTIVL TSLVDMYAKCGA+HEALA FR+C LQR
Sbjct: 243 VLCACAHLGALEQGRMMHGYIVENELPLTIVLLTSLVDMYAKCGAIHEALAAFRACPLQR 302
Query: 301 TDVLIWNAIIGGLATHGLIKESIDLFSEMQMVGIVPDEITYLCLLSCCAHGGLVKEAWYF 360
TDVLIWNAIIGGLATHGLIKES+DLF+EMQMVGI PDEITYLCLLSCCAHGGLV EAWYF
Sbjct: 303 TDVLIWNAIIGGLATHGLIKESMDLFTEMQMVGIAPDEITYLCLLSCCAHGGLVNEAWYF 362
Query: 361 FDCLHKHGMTPKVEHYACMVDVLSRAGQVSEAYQFLCQMPVQPTSSMLGAILSGCMKYGK 420
FDCLHKHGMTPKVEHYACMVD LSRAGQVSEAYQFLCQM +QPTSSMLGA+LSGCMK+GK
Sbjct: 363 FDCLHKHGMTPKVEHYACMVDALSRAGQVSEAYQFLCQMTIQPTSSMLGALLSGCMKHGK 422
Query: 421 LDLAEVVGRRLVALDPDHDGRYVGLSNIYAVDKRWDDARNIREAMEKRGVKKSPGFSFVE 480
LDLAEVVGRRLV LDPDHDGRY+GLSNIYAVDKRW+DARNIREAME+RGVKKSPGFSFVE
Sbjct: 423 LDLAEVVGRRLVELDPDHDGRYIGLSNIYAVDKRWNDARNIREAMERRGVKKSPGFSFVE 482
Query: 481 VFGILHRFIAHDKTHGDSEQIYMMLNLIIDQMKPIKYSENQD 523
VFGILHRFIAHDKTHGDSE+IY+MLNLIIDQMKPI+ SENQ+
Sbjct: 483 VFGILHRFIAHDKTHGDSERIYVMLNLIIDQMKPIEDSENQE 524
BLAST of Lcy13g008360 vs. ExPASy TrEMBL
Match:
A0A6J1E1N1 (pentatricopeptide repeat-containing protein At5g08305 OS=Momordica charantia OX=3673 GN=LOC111025604 PE=4 SV=1)
HSP 1 Score: 936.4 bits (2419), Expect = 5.2e-269
Identity = 457/523 (87.38%), Postives = 486/523 (92.93%), Query Frame = 0
Query: 3 NQTLISLLDRCKSMAELKTIHALLFTFGLSQDDAIVSKLLSFSALSPAGDPDYSYKLLLN 62
NQTLISLL R KSM ELK IHALLFT GLSQDD +S LLSFSALSPAGD DYSY+LLLN
Sbjct: 28 NQTLISLLHRFKSMPELKRIHALLFTSGLSQDDVAISPLLSFSALSPAGDLDYSYRLLLN 87
Query: 63 LPNPTTFNWNTLIRGFSNTRNPNRSITVFVKMLRNGVSPDYLTYPFLAKASAKLLNRQLG 122
LPNPTTFNWNTLIRGFSN +NPNRSIT+FVKMLRNGV+PDYLTYPFL KASA++LN +LG
Sbjct: 88 LPNPTTFNWNTLIRGFSNVKNPNRSITLFVKMLRNGVTPDYLTYPFLVKASARILNWELG 147
Query: 123 MAVHVHVAKTGHEVDRFVQNSLIHMYASCGDIASARKVFDEMPTKNLVSWNAMLDGYAKC 182
AVHVHVAKTGHE D+FVQNSLIHMYASC DIASARKVFDEM KNLVSWNAMLDGYAKC
Sbjct: 148 KAVHVHVAKTGHESDKFVQNSLIHMYASCRDIASARKVFDEMAVKNLVSWNAMLDGYAKC 207
Query: 183 GDVNTAREVFDLMPDKDVVSWSSLIDGYVKGGEYGEAMALFERMRFAGPMANEVTLVSAL 242
GDV A+EVFDLMP++DVVSWSSLIDGYVKGGEYGEAMALFERM GPMANEVTLVS L
Sbjct: 208 GDVGMAKEVFDLMPERDVVSWSSLIDGYVKGGEYGEAMALFERMCCVGPMANEVTLVSVL 267
Query: 243 CACAHLGALEQGRMMHHYIVENELPLTIVLQTSLVDMYAKCGAVHEALAVFRSCSLQRTD 302
CACAHLGALE+GRMMH+YIVENELPLTIVLQTSLVDMYAKCGA+HEAL+VFR+ S+QRTD
Sbjct: 268 CACAHLGALEKGRMMHNYIVENELPLTIVLQTSLVDMYAKCGAIHEALSVFRAGSMQRTD 327
Query: 303 VLIWNAIIGGLATHGLIKESIDLFSEMQMVGIVPDEITYLCLLSCCAHGGLVKEAWYFFD 362
VLIWNAIIGGLATHGLIKES++LF EMQ GI PDEITYLCLLSCCAHGGLVKEAWYFFD
Sbjct: 328 VLIWNAIIGGLATHGLIKESMELFLEMQKFGIAPDEITYLCLLSCCAHGGLVKEAWYFFD 387
Query: 363 CLHKHGMTPKVEHYACMVDVLSRAGQVSEAYQFLCQMPVQPTSSMLGAILSGCMKYGKLD 422
CL K GMT KVEHYACMVD LSRAGQV EAY+FLCQMPV+PTSSMLGA++SGCMK+GKLD
Sbjct: 388 CLRKCGMTMKVEHYACMVDALSRAGQVVEAYRFLCQMPVEPTSSMLGALMSGCMKHGKLD 447
Query: 423 LAEVVGRRLVALDPDHDGRYVGLSNIYAVDKRWDDARNIREAMEKRGVKKSPGFSFVEVF 482
LAEVVGRRLV LDP+HDGRYVGLSNIYAVDKRWDDARNIREAMEKRGVKKSPGFSFVEVF
Sbjct: 448 LAEVVGRRLVELDPNHDGRYVGLSNIYAVDKRWDDARNIREAMEKRGVKKSPGFSFVEVF 507
Query: 483 GILHRFIAHDKTHGDSEQIYMMLNLIIDQMKPIKYSENQDYYL 526
G LHRFIAHDKTHGDSEQIYMMLNL+IDQMKP+K SENQ+Y L
Sbjct: 508 GFLHRFIAHDKTHGDSEQIYMMLNLLIDQMKPVKDSENQEYCL 550
BLAST of Lcy13g008360 vs. ExPASy TrEMBL
Match:
A0A0A0KMZ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G387410 PE=4 SV=1)
HSP 1 Score: 925.6 bits (2391), Expect = 9.1e-266
Identity = 441/520 (84.81%), Postives = 485/520 (93.27%), Query Frame = 0
Query: 3 NQTLISLLDRCKSMAELKTIHALLFTFGLSQDDAIVSKLLSFSALSPAGDPDYSYKLLLN 62
NQTLISLLD CKSM ELK IHALLFT G+SQD+ I SKLL FSALSPA D DYSYKL+LN
Sbjct: 13 NQTLISLLDGCKSMFELKRIHALLFTLGISQDETIKSKLLLFSALSPARDLDYSYKLILN 72
Query: 63 LPNPTTFNWNTLIRGFSNTRNPNRSITVFVKMLRNGVSPDYLTYPFLAKASAKLLNRQLG 122
+PNPTTFNWNTLIR FSNT+NPN SITVF+KML+NGVSPDYLTYPFL KA++KLLN++LG
Sbjct: 73 VPNPTTFNWNTLIRAFSNTKNPNPSITVFIKMLQNGVSPDYLTYPFLVKATSKLLNQELG 132
Query: 123 MAVHVHVAKTGHEVDRFVQNSLIHMYASCGDIASARKVFDEMPTKNLVSWNAMLDGYAKC 182
MAVHVH+ K+GHE+D+F+QNSLIHMYASC DIASARKVFDEMP KNLV+WNAMLDGYAKC
Sbjct: 133 MAVHVHIVKSGHEIDKFIQNSLIHMYASCRDIASARKVFDEMPRKNLVTWNAMLDGYAKC 192
Query: 183 GDVNTAREVFDLMPDKDVVSWSSLIDGYVKGGEYGEAMALFERMRFAGPMANEVTLVSAL 242
GD+N AREVF+LMP+KDVVSWSSLIDGYVKG YGEAMALFERM F GPMANEVTLVSAL
Sbjct: 193 GDLNMAREVFNLMPEKDVVSWSSLIDGYVKGRVYGEAMALFERMSFDGPMANEVTLVSAL 252
Query: 243 CACAHLGALEQGRMMHHYIVENELPLTIVLQTSLVDMYAKCGAVHEALAVFRSCSLQRTD 302
CACAHLGALE GRMMH YIVENELPLTIVLQTSLVDMYAKCGA+HEAL VFR+CSLQ D
Sbjct: 253 CACAHLGALEHGRMMHRYIVENELPLTIVLQTSLVDMYAKCGAIHEALTVFRACSLQEAD 312
Query: 303 VLIWNAIIGGLATHGLIKESIDLFSEMQMVGIVPDEITYLCLLSCCAHGGLVKEAWYFFD 362
VLIWNAIIGGLATHGLIKE+++LF EM+MVGIVPDEITYLCLLSCCAHGGLV+EAWYFFD
Sbjct: 313 VLIWNAIIGGLATHGLIKEAMNLFCEMKMVGIVPDEITYLCLLSCCAHGGLVEEAWYFFD 372
Query: 363 CLHKHGMTPKVEHYACMVDVLSRAGQVSEAYQFLCQMPVQPTSSMLGAILSGCMKYGKLD 422
CL KHGM PKVEHYACMVD LSRAGQVSEAYQFLCQMPVQPTSSMLGA+LSGCMK+GKLD
Sbjct: 373 CLRKHGMIPKVEHYACMVDALSRAGQVSEAYQFLCQMPVQPTSSMLGALLSGCMKHGKLD 432
Query: 423 LAEVVGRRLVALDPDHDGRYVGLSNIYAVDKRWDDARNIREAMEKRGVKKSPGFSFVEVF 482
+A+VVGRRLV LDP+HDGRYVGLSNIYA DKRWDDA+NIREAME++GVKKSPGFSF+EV+
Sbjct: 433 IAKVVGRRLVELDPNHDGRYVGLSNIYAADKRWDDAKNIREAMERKGVKKSPGFSFIEVY 492
Query: 483 GILHRFIAHDKTHGDSEQIYMMLNLIIDQMKPIKYSENQD 523
G+LHRF+AHDKTHGD EQI+MMLNLI+DQMKPI+ +Q+
Sbjct: 493 GVLHRFMAHDKTHGDCEQIFMMLNLIVDQMKPIEDYVHQE 532
BLAST of Lcy13g008360 vs. ExPASy TrEMBL
Match:
A0A1S3CCZ9 (pentatricopeptide repeat-containing protein At5g08305 OS=Cucumis melo OX=3656 GN=LOC103499271 PE=4 SV=1)
HSP 1 Score: 923.7 bits (2386), Expect = 3.5e-265
Identity = 439/520 (84.42%), Postives = 486/520 (93.46%), Query Frame = 0
Query: 3 NQTLISLLDRCKSMAELKTIHALLFTFGLSQDDAIVSKLLSFSALSPAGDPDYSYKLLLN 62
NQ LISLLD CKSM ELK IHALLFT G+SQD+ I SKLL FSALSPA D DYSYKL+LN
Sbjct: 14 NQNLISLLDGCKSMFELKRIHALLFTLGISQDEIIKSKLLLFSALSPARDLDYSYKLILN 73
Query: 63 LPNPTTFNWNTLIRGFSNTRNPNRSITVFVKMLRNGVSPDYLTYPFLAKASAKLLNRQLG 122
LPNPTTFNWNTLIRGFSNT+NPN SITVF+KML+NGVSP+YLTYPFL KA++KLLN++LG
Sbjct: 74 LPNPTTFNWNTLIRGFSNTKNPNPSITVFIKMLQNGVSPNYLTYPFLVKATSKLLNQELG 133
Query: 123 MAVHVHVAKTGHEVDRFVQNSLIHMYASCGDIASARKVFDEMPTKNLVSWNAMLDGYAKC 182
MA+HVH+ K+GHE+D+F+QNSLIHMYASC DIASARKVFDEM TKNLV+WNAMLDGYAKC
Sbjct: 134 MALHVHIVKSGHEIDKFIQNSLIHMYASCRDIASARKVFDEMATKNLVTWNAMLDGYAKC 193
Query: 183 GDVNTAREVFDLMPDKDVVSWSSLIDGYVKGGEYGEAMALFERMRFAGPMANEVTLVSAL 242
G++N AREVF LMP++DVVSWSSLIDGYVKGG YGEAMALFERM F GPMANEVTLVS L
Sbjct: 194 GNLNMAREVFSLMPERDVVSWSSLIDGYVKGGVYGEAMALFERMSFVGPMANEVTLVSVL 253
Query: 243 CACAHLGALEQGRMMHHYIVENELPLTIVLQTSLVDMYAKCGAVHEALAVFRSCSLQRTD 302
CACAHLGALE+GRMMH YIVENELPLTIVLQTSLVDMYAKCGA+HEAL VFR+CSLQ D
Sbjct: 254 CACAHLGALERGRMMHRYIVENELPLTIVLQTSLVDMYAKCGAIHEALTVFRACSLQEAD 313
Query: 303 VLIWNAIIGGLATHGLIKESIDLFSEMQMVGIVPDEITYLCLLSCCAHGGLVKEAWYFFD 362
VLIWNAIIGGLATHGLIKES+DLF +MQMVGIVPDEITYLCLLSCCAHGGLV+EAWYFFD
Sbjct: 314 VLIWNAIIGGLATHGLIKESLDLFCKMQMVGIVPDEITYLCLLSCCAHGGLVEEAWYFFD 373
Query: 363 CLHKHGMTPKVEHYACMVDVLSRAGQVSEAYQFLCQMPVQPTSSMLGAILSGCMKYGKLD 422
CL KHGM PKVEHYACMVDVLSRAGQVSEAYQFLCQMPVQPTSSMLGA+LSGCMK+GKLD
Sbjct: 374 CLRKHGMFPKVEHYACMVDVLSRAGQVSEAYQFLCQMPVQPTSSMLGALLSGCMKHGKLD 433
Query: 423 LAEVVGRRLVALDPDHDGRYVGLSNIYAVDKRWDDARNIREAMEKRGVKKSPGFSFVEVF 482
+A+VVGRRLV LDP+HDGRYVGLSNIYA DKRWDDA+N+REAME++G+KKSPGFSF+EV+
Sbjct: 434 IAKVVGRRLVELDPNHDGRYVGLSNIYAADKRWDDAKNMREAMERKGMKKSPGFSFIEVY 493
Query: 483 GILHRFIAHDKTHGDSEQIYMMLNLIIDQMKPIKYSENQD 523
GILHRF+AHDKTHGDS+QI+MMLN I+DQMKPI+ +Q+
Sbjct: 494 GILHRFMAHDKTHGDSKQIFMMLNFIVDQMKPIEDYVHQE 533
BLAST of Lcy13g008360 vs. NCBI nr
Match:
XP_023532676.1 (pentatricopeptide repeat-containing protein At5g08305 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023532683.1 pentatricopeptide repeat-containing protein At5g08305 isoform X2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 974.9 bits (2519), Expect = 2.7e-280
Identity = 476/525 (90.67%), Postives = 499/525 (95.05%), Query Frame = 0
Query: 1 MQNQTLISLLDRCKSMAELKTIHALLFTFGLSQDDAIVSKLLSFSALSPAGDPDYSYKLL 60
M +LISLLD+CKSM+EL+ IHALLFTFG+SQDDA+VSKLLSFSALSPAGD DYSYKLL
Sbjct: 2 MNASSLISLLDKCKSMSELRRIHALLFTFGVSQDDAVVSKLLSFSALSPAGDLDYSYKLL 61
Query: 61 LNLPNPTTFNWNTLIRGFSNTRNPNRSITVFVKMLRNGVSPDYLTYPFLAKASAKLLNRQ 120
LNLPNPTTF WNTLIRGFSN+RNPNRSITVFV+MLRNGVSPDY+TYPFL KA AKLLN++
Sbjct: 62 LNLPNPTTFKWNTLIRGFSNSRNPNRSITVFVRMLRNGVSPDYMTYPFLGKAIAKLLNQK 121
Query: 121 LGMAVHVHVAKTGHEVDRFVQNSLIHMYASCGDIASARKVFDEMPTKNLVSWNAMLDGYA 180
LGMAVHVHVAKTGHEVDRFV NSLIHMYASCGDIA ARKVFDEMPTKNLVSWNAMLDGYA
Sbjct: 122 LGMAVHVHVAKTGHEVDRFVMNSLIHMYASCGDIAFARKVFDEMPTKNLVSWNAMLDGYA 181
Query: 181 KCGDVNTAREVFDLMPDKDVVSWSSLIDGYVKGGEYGEAMALFERMRFAGPMANEVTLVS 240
KCGDVNTAREVFDLM ++DVVSWSSLIDGYVK GEYGEAMALFERMR AGPMANEVTLVS
Sbjct: 182 KCGDVNTAREVFDLMHERDVVSWSSLIDGYVKCGEYGEAMALFERMRSAGPMANEVTLVS 241
Query: 241 ALCACAHLGALEQGRMMHHYIVENELPLTIVLQTSLVDMYAKCGAVHEALAVFRSCSLQR 300
LCACAHLGALEQGRMMH YIVENELPLTIVL TSLVDMYAKCGA+HEALA FR+C LQR
Sbjct: 242 VLCACAHLGALEQGRMMHGYIVENELPLTIVLLTSLVDMYAKCGAIHEALAAFRACPLQR 301
Query: 301 TDVLIWNAIIGGLATHGLIKESIDLFSEMQMVGIVPDEITYLCLLSCCAHGGLVKEAWYF 360
TDVLIWNAIIGGLATHGLIKES+DLFSEMQMVGI PDEITYLCLLSCCAHGGLV EAWYF
Sbjct: 302 TDVLIWNAIIGGLATHGLIKESMDLFSEMQMVGIAPDEITYLCLLSCCAHGGLVNEAWYF 361
Query: 361 FDCLHKHGMTPKVEHYACMVDVLSRAGQVSEAYQFLCQMPVQPTSSMLGAILSGCMKYGK 420
FDCLHKHGMTPK EHYACMVD LSRAGQVSEAYQFLCQM VQPTSSMLGA+LSGCMK+GK
Sbjct: 362 FDCLHKHGMTPKDEHYACMVDALSRAGQVSEAYQFLCQMTVQPTSSMLGALLSGCMKHGK 421
Query: 421 LDLAEVVGRRLVALDPDHDGRYVGLSNIYAVDKRWDDARNIREAMEKRGVKKSPGFSFVE 480
LDLAEVVGRRLV LDPDHDGRYVGLSNIYAVDKRW+DARNIREAMEKRGVKKSPGFSFVE
Sbjct: 422 LDLAEVVGRRLVELDPDHDGRYVGLSNIYAVDKRWNDARNIREAMEKRGVKKSPGFSFVE 481
Query: 481 VFGILHRFIAHDKTHGDSEQIYMMLNLIIDQMKPIKYSENQDYYL 526
VFGILHRFIAHDKTHGDSE+IY+MLNLIIDQMKPI+ SENQ+Y L
Sbjct: 482 VFGILHRFIAHDKTHGDSERIYVMLNLIIDQMKPIEDSENQEYCL 526
BLAST of Lcy13g008360 vs. NCBI nr
Match:
XP_022942610.1 (pentatricopeptide repeat-containing protein At5g08305 [Cucurbita moschata])
HSP 1 Score: 971.5 bits (2510), Expect = 3.0e-279
Identity = 472/522 (90.42%), Postives = 497/522 (95.21%), Query Frame = 0
Query: 1 MQNQTLISLLDRCKSMAELKTIHALLFTFGLSQDDAIVSKLLSFSALSPAGDPDYSYKLL 60
M +LISLLD+CKSM+EL+ IHALLFTFG SQDDA+VSKLLSFSALSPAGD DYSYKLL
Sbjct: 2 MNASSLISLLDKCKSMSELRRIHALLFTFGASQDDAVVSKLLSFSALSPAGDLDYSYKLL 61
Query: 61 LNLPNPTTFNWNTLIRGFSNTRNPNRSITVFVKMLRNGVSPDYLTYPFLAKASAKLLNRQ 120
LNLPNPTTF WNTLIRGFSN+RNPNRSITVFV+MLRNGVSPDY+TYPFL KA+AKLLNR+
Sbjct: 62 LNLPNPTTFKWNTLIRGFSNSRNPNRSITVFVRMLRNGVSPDYMTYPFLGKATAKLLNRK 121
Query: 121 LGMAVHVHVAKTGHEVDRFVQNSLIHMYASCGDIASARKVFDEMPTKNLVSWNAMLDGYA 180
LGMAVHVHVAKTGHEVDRFV NSLIHMYASCGDIA ARKVFDEMPTKNLVSWNAMLDGYA
Sbjct: 122 LGMAVHVHVAKTGHEVDRFVMNSLIHMYASCGDIALARKVFDEMPTKNLVSWNAMLDGYA 181
Query: 181 KCGDVNTAREVFDLMPDKDVVSWSSLIDGYVKGGEYGEAMALFERMRFAGPMANEVTLVS 240
KCGDVNTAREVFDLM ++DVVSWSSLIDGYVK GEYGEAM+LFERMR AGPMANEVTLVS
Sbjct: 182 KCGDVNTAREVFDLMHERDVVSWSSLIDGYVKCGEYGEAMSLFERMRSAGPMANEVTLVS 241
Query: 241 ALCACAHLGALEQGRMMHHYIVENELPLTIVLQTSLVDMYAKCGAVHEALAVFRSCSLQR 300
LCACAHLGALEQGRMMH YIVENELP TIVL TSLVDMYAKCGA+HEALA FR+C LQR
Sbjct: 242 VLCACAHLGALEQGRMMHGYIVENELPFTIVLLTSLVDMYAKCGAIHEALAAFRACPLQR 301
Query: 301 TDVLIWNAIIGGLATHGLIKESIDLFSEMQMVGIVPDEITYLCLLSCCAHGGLVKEAWYF 360
TDVLIWNAIIGGLATHGLIKES+DLFSEMQMVGI PDEITYLCLLSCCAHGGLV EAWYF
Sbjct: 302 TDVLIWNAIIGGLATHGLIKESMDLFSEMQMVGIAPDEITYLCLLSCCAHGGLVNEAWYF 361
Query: 361 FDCLHKHGMTPKVEHYACMVDVLSRAGQVSEAYQFLCQMPVQPTSSMLGAILSGCMKYGK 420
FDCLHKHGMTPKVEHYACMVD LSRAGQVSEAYQFLCQM VQPTSSMLGA+LSGCMK+GK
Sbjct: 362 FDCLHKHGMTPKVEHYACMVDALSRAGQVSEAYQFLCQMTVQPTSSMLGALLSGCMKHGK 421
Query: 421 LDLAEVVGRRLVALDPDHDGRYVGLSNIYAVDKRWDDARNIREAMEKRGVKKSPGFSFVE 480
LDLAEVVGRRLV LDPDHDGRYVGLSNIYAVDKRW+DARNIREAME+RGVKKSPGFSFVE
Sbjct: 422 LDLAEVVGRRLVELDPDHDGRYVGLSNIYAVDKRWNDARNIREAMERRGVKKSPGFSFVE 481
Query: 481 VFGILHRFIAHDKTHGDSEQIYMMLNLIIDQMKPIKYSENQD 523
VFGILHRFIAHDKTHGDSE+IY+MLNLIIDQM+PI+ SENQ+
Sbjct: 482 VFGILHRFIAHDKTHGDSERIYVMLNLIIDQMRPIEDSENQE 523
BLAST of Lcy13g008360 vs. NCBI nr
Match:
XP_022987941.1 (pentatricopeptide repeat-containing protein At5g08305 isoform X1 [Cucurbita maxima])
HSP 1 Score: 967.6 bits (2500), Expect = 4.3e-278
Identity = 469/522 (89.85%), Postives = 497/522 (95.21%), Query Frame = 0
Query: 1 MQNQTLISLLDRCKSMAELKTIHALLFTFGLSQDDAIVSKLLSFSALSPAGDPDYSYKLL 60
M+ +L SLLD+CKSM+EL+ IHALLFTFG+SQDDA+VSKLLSFSALSPAGD DYSYKLL
Sbjct: 3 MKASSLTSLLDKCKSMSELRRIHALLFTFGVSQDDAVVSKLLSFSALSPAGDLDYSYKLL 62
Query: 61 LNLPNPTTFNWNTLIRGFSNTRNPNRSITVFVKMLRNGVSPDYLTYPFLAKASAKLLNRQ 120
LNLPNPTTF WNTLIRGFSN+RNPNRSITVFV+MLRNGVSPDY+TYPFL KA+AKLLNR+
Sbjct: 63 LNLPNPTTFKWNTLIRGFSNSRNPNRSITVFVRMLRNGVSPDYMTYPFLGKATAKLLNRK 122
Query: 121 LGMAVHVHVAKTGHEVDRFVQNSLIHMYASCGDIASARKVFDEMPTKNLVSWNAMLDGYA 180
LGMAVHVHVAKTGHEVDRFV NSLIHMYASCGDIA ARKVFDEMPTKNLVSWNAMLDGYA
Sbjct: 123 LGMAVHVHVAKTGHEVDRFVMNSLIHMYASCGDIAFARKVFDEMPTKNLVSWNAMLDGYA 182
Query: 181 KCGDVNTAREVFDLMPDKDVVSWSSLIDGYVKGGEYGEAMALFERMRFAGPMANEVTLVS 240
KC DVNTAREVFDLM ++DVVSWSSLIDGYVK GEYGEAMALFE MR AGPMANEVTLVS
Sbjct: 183 KCRDVNTAREVFDLMHERDVVSWSSLIDGYVKCGEYGEAMALFEHMRSAGPMANEVTLVS 242
Query: 241 ALCACAHLGALEQGRMMHHYIVENELPLTIVLQTSLVDMYAKCGAVHEALAVFRSCSLQR 300
LCACAHLGALEQGRMMH YIVENELPLTIVL TSLVDMYAKCGA+HEALA FR+C LQR
Sbjct: 243 VLCACAHLGALEQGRMMHGYIVENELPLTIVLLTSLVDMYAKCGAIHEALAAFRACPLQR 302
Query: 301 TDVLIWNAIIGGLATHGLIKESIDLFSEMQMVGIVPDEITYLCLLSCCAHGGLVKEAWYF 360
TDVLIWNAIIGGLATHGLIKES+DLF+EMQMVGI PDEITYLCLLSCCAHGGLV EAWYF
Sbjct: 303 TDVLIWNAIIGGLATHGLIKESMDLFTEMQMVGIAPDEITYLCLLSCCAHGGLVNEAWYF 362
Query: 361 FDCLHKHGMTPKVEHYACMVDVLSRAGQVSEAYQFLCQMPVQPTSSMLGAILSGCMKYGK 420
FDCLHKHGMTPKVEHYACMVD LSRAGQVSEAYQFLCQM +QPTSSMLGA+LSGCMK+GK
Sbjct: 363 FDCLHKHGMTPKVEHYACMVDALSRAGQVSEAYQFLCQMTIQPTSSMLGALLSGCMKHGK 422
Query: 421 LDLAEVVGRRLVALDPDHDGRYVGLSNIYAVDKRWDDARNIREAMEKRGVKKSPGFSFVE 480
LDLAEVVGRRLV LDPDHDGRY+GLSNIYAVDKRW+DARNIREAME+RGVKKSPGFSFVE
Sbjct: 423 LDLAEVVGRRLVELDPDHDGRYIGLSNIYAVDKRWNDARNIREAMERRGVKKSPGFSFVE 482
Query: 481 VFGILHRFIAHDKTHGDSEQIYMMLNLIIDQMKPIKYSENQD 523
VFGILHRFIAHDKTHGDSE+IY+MLNLIIDQMKPI+ SENQ+
Sbjct: 483 VFGILHRFIAHDKTHGDSERIYVMLNLIIDQMKPIEDSENQE 524
BLAST of Lcy13g008360 vs. NCBI nr
Match:
KAG6600119.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 966.1 bits (2496), Expect = 1.3e-277
Identity = 471/522 (90.23%), Postives = 497/522 (95.21%), Query Frame = 0
Query: 1 MQNQTLISLLDRCKSMAELKTIHALLFTFGLSQDDAIVSKLLSFSALSPAGDPDYSYKLL 60
M +LISLLD+CKSM+EL+ IHALLFTFG+SQDDA+VSKLLSFSALSPAGD DYSYKLL
Sbjct: 2 MNASSLISLLDKCKSMSELRRIHALLFTFGVSQDDAVVSKLLSFSALSPAGDLDYSYKLL 61
Query: 61 LNLPNPTTFNWNTLIRGFSNTRNPNRSITVFVKMLRNGVSPDYLTYPFLAKASAKLLNRQ 120
LNL NPTTF WNTLIRGFSN+RNPNRSITVFV+MLRNGVSPDY+TYPFL KA+AKLLNR+
Sbjct: 62 LNLHNPTTFKWNTLIRGFSNSRNPNRSITVFVRMLRNGVSPDYMTYPFLGKATAKLLNRK 121
Query: 121 LGMAVHVHVAKTGHEVDRFVQNSLIHMYASCGDIASARKVFDEMPTKNLVSWNAMLDGYA 180
LGMAVHVHVAKTGHEVDRFV NSLIHMYASCGDIA ARKVFDEMPTKNLVSWNAMLDGYA
Sbjct: 122 LGMAVHVHVAKTGHEVDRFVMNSLIHMYASCGDIALARKVFDEMPTKNLVSWNAMLDGYA 181
Query: 181 KCGDVNTAREVFDLMPDKDVVSWSSLIDGYVKGGEYGEAMALFERMRFAGPMANEVTLVS 240
KCGDVNTAREVFDLM ++DVVSWSSLIDGYVK GEYGEAMALFERMR AGPMANEVTLVS
Sbjct: 182 KCGDVNTAREVFDLMHERDVVSWSSLIDGYVKCGEYGEAMALFERMRSAGPMANEVTLVS 241
Query: 241 ALCACAHLGALEQGRMMHHYIVENELPLTIVLQTSLVDMYAKCGAVHEALAVFRSCSLQR 300
LCACAHLGALEQGR+MH YIVENELPLTIVL TSLVDMYAKCGA+HEALA FR+C LQR
Sbjct: 242 VLCACAHLGALEQGRIMHGYIVENELPLTIVLLTSLVDMYAKCGAIHEALAAFRACPLQR 301
Query: 301 TDVLIWNAIIGGLATHGLIKESIDLFSEMQMVGIVPDEITYLCLLSCCAHGGLVKEAWYF 360
TDVLIWNAIIGGLATHGLIKES+DLF+EMQMVGI PDEITYLCLLSCCAHGGLV EAWYF
Sbjct: 302 TDVLIWNAIIGGLATHGLIKESMDLFTEMQMVGIAPDEITYLCLLSCCAHGGLVNEAWYF 361
Query: 361 FDCLHKHGMTPKVEHYACMVDVLSRAGQVSEAYQFLCQMPVQPTSSMLGAILSGCMKYGK 420
FDCLHKHGMTPKVEHYACMVD LSRAGQVSEAYQFLCQM VQPTSSMLGA+LSGCMK+GK
Sbjct: 362 FDCLHKHGMTPKVEHYACMVDALSRAGQVSEAYQFLCQMTVQPTSSMLGALLSGCMKHGK 421
Query: 421 LDLAEVVGRRLVALDPDHDGRYVGLSNIYAVDKRWDDARNIREAMEKRGVKKSPGFSFVE 480
LDLAEVVGRRLV LDPDHDGRYVGLSNIYAVDKRW+DARNIREAME+RGVKKSPGFSFVE
Sbjct: 422 LDLAEVVGRRLVELDPDHDGRYVGLSNIYAVDKRWNDARNIREAMERRGVKKSPGFSFVE 481
Query: 481 VFGILHRFIAHDKTHGDSEQIYMMLNLIIDQMKPIKYSENQD 523
VFGILHRFIAHDKTHGDSE+IY+MLNLIIDQMK I+ SENQ+
Sbjct: 482 VFGILHRFIAHDKTHGDSERIYVMLNLIIDQMKLIEDSENQE 523
BLAST of Lcy13g008360 vs. NCBI nr
Match:
KAG7030791.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 965.3 bits (2494), Expect = 2.1e-277
Identity = 470/522 (90.04%), Postives = 496/522 (95.02%), Query Frame = 0
Query: 1 MQNQTLISLLDRCKSMAELKTIHALLFTFGLSQDDAIVSKLLSFSALSPAGDPDYSYKLL 60
M +LISLLD+CKSM+EL+ IHALLFTFG+SQDDA+VSKLLSFSALSPAGD DYSYKLL
Sbjct: 2 MNASSLISLLDKCKSMSELRRIHALLFTFGVSQDDAVVSKLLSFSALSPAGDLDYSYKLL 61
Query: 61 LNLPNPTTFNWNTLIRGFSNTRNPNRSITVFVKMLRNGVSPDYLTYPFLAKASAKLLNRQ 120
LNL NPTTF WNTL+RGFSN+RNPNRSITVFV+MLRNGVSPDY+TYPFL KA+AKLLNR+
Sbjct: 62 LNLHNPTTFKWNTLVRGFSNSRNPNRSITVFVRMLRNGVSPDYMTYPFLGKATAKLLNRK 121
Query: 121 LGMAVHVHVAKTGHEVDRFVQNSLIHMYASCGDIASARKVFDEMPTKNLVSWNAMLDGYA 180
LGMAVHVHVAKTGHEVDRFV NSLIHMYASCGDI ARKVFDEMPTKNLVSWNAMLDGYA
Sbjct: 122 LGMAVHVHVAKTGHEVDRFVMNSLIHMYASCGDIELARKVFDEMPTKNLVSWNAMLDGYA 181
Query: 181 KCGDVNTAREVFDLMPDKDVVSWSSLIDGYVKGGEYGEAMALFERMRFAGPMANEVTLVS 240
KCGDVNTAREVFDLM ++DVVSWSSLIDGYVK GEYGEAMALFERMR AGPMANEVTLVS
Sbjct: 182 KCGDVNTAREVFDLMHERDVVSWSSLIDGYVKCGEYGEAMALFERMRSAGPMANEVTLVS 241
Query: 241 ALCACAHLGALEQGRMMHHYIVENELPLTIVLQTSLVDMYAKCGAVHEALAVFRSCSLQR 300
LCACAHLGALEQGRMMH YIVENELPLTIVL TSLVDMYAKCGA+HEALA FR+C LQR
Sbjct: 242 VLCACAHLGALEQGRMMHGYIVENELPLTIVLLTSLVDMYAKCGAIHEALAAFRACPLQR 301
Query: 301 TDVLIWNAIIGGLATHGLIKESIDLFSEMQMVGIVPDEITYLCLLSCCAHGGLVKEAWYF 360
TDVLIWNAIIGGLATHGLIKES+DLF+EMQMVGI PDEITYLCLLSCCAHGGLV EAWYF
Sbjct: 302 TDVLIWNAIIGGLATHGLIKESMDLFTEMQMVGIAPDEITYLCLLSCCAHGGLVNEAWYF 361
Query: 361 FDCLHKHGMTPKVEHYACMVDVLSRAGQVSEAYQFLCQMPVQPTSSMLGAILSGCMKYGK 420
FDCLHKHGMTPKVEHYACMVD LSRAGQVSEAYQFLCQM VQPTSSMLGA+LSGCMK+GK
Sbjct: 362 FDCLHKHGMTPKVEHYACMVDALSRAGQVSEAYQFLCQMTVQPTSSMLGALLSGCMKHGK 421
Query: 421 LDLAEVVGRRLVALDPDHDGRYVGLSNIYAVDKRWDDARNIREAMEKRGVKKSPGFSFVE 480
LDLAEVVGRRLV LDPDHDGRYVGLSNIYAVDKRW+DARNIREAME+RGVKKSPGFSFVE
Sbjct: 422 LDLAEVVGRRLVELDPDHDGRYVGLSNIYAVDKRWNDARNIREAMERRGVKKSPGFSFVE 481
Query: 481 VFGILHRFIAHDKTHGDSEQIYMMLNLIIDQMKPIKYSENQD 523
VFGILHRFIAHDKTHGDSE+IY+MLNLIIDQMK I+ SENQ+
Sbjct: 482 VFGILHRFIAHDKTHGDSERIYVMLNLIIDQMKLIEDSENQE 523
BLAST of Lcy13g008360 vs. TAIR 10
Match:
AT5G08305.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 624.4 bits (1609), Expect = 8.4e-179
Identity = 295/500 (59.00%), Postives = 395/500 (79.00%), Query Frame = 0
Query: 9 LLDRCKSMAELKTIHALLFTFGLSQDDAIVSKLLSFSALSPAGDPDYSYKLLLNLPNPTT 68
L +CKSM+EL IH LL T GLS+++ VS+ LSFSALS +GD DY+YK L L +P
Sbjct: 14 LRHQCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPN 73
Query: 69 FNWNTLIRGFSNTRNPNRSITVFVKMLRNGVSPDYLTYPFLAKASAKLLNRQLGMAVHVH 128
+ WN +IRGFSN+RNP +SI+V+++MLR G+ PD++TYPFL K+S++L NR+LG ++H
Sbjct: 74 YGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCS 133
Query: 129 VAKTGHEVDRFVQNSLIHMYASCGDIASARKVFDEMPTKNLVSWNAMLDGYAKCGDVNTA 188
V K+G E D F+ N+LIHMY S D ASARK+FDEMP KNLV+WN++LD YAK GDV +A
Sbjct: 134 VVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSA 193
Query: 189 REVFDLMPDKDVVSWSSLIDGYVKGGEYGEAMALFER-MRFAGPMANEVTLVSALCACAH 248
R VFD M ++DVV+WSS+IDGYVK GEY +A+ +F++ MR ANEVT+VS +CACAH
Sbjct: 194 RLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAH 253
Query: 249 LGALEQGRMMHHYIVENELPLTIVLQTSLVDMYAKCGAVHEALAVFRSCSLQRTDVLIWN 308
LGAL +G+ +H YI++ LPLT++LQTSL+DMYAKCG++ +A +VF S++ TD L+WN
Sbjct: 254 LGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWN 313
Query: 309 AIIGGLATHGLIKESIDLFSEMQMVGIVPDEITYLCLLSCCAHGGLVKEAWYFFDCLHKH 368
AIIGGLA+HG I+ES+ LF +M+ I PDEIT+LCLL+ C+HGGLVKEAW+FF L +
Sbjct: 314 AIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKES 373
Query: 369 GMTPKVEHYACMVDVLSRAGQVSEAYQFLCQMPVQPTSSMLGAILSGCMKYGKLDLAEVV 428
G PK EHYACMVDVLSRAG V +A+ F+ +MP++PT SMLGA+L+GC+ +G L+LAE V
Sbjct: 374 GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETV 433
Query: 429 GRRLVALDPDHDGRYVGLSNIYAVDKRWDDARNIREAMEKRGVKKSPGFSFVEVFGILHR 488
G++L+ L P +DGRYVGL+N+YA++K++ AR++REAMEK+GVKK G S +++ G HR
Sbjct: 434 GKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHR 493
Query: 489 FIAHDKTHGDSEQIYMMLNL 508
FIAHDKTH S++IY +L L
Sbjct: 494 FIAHDKTHFHSDKIYAVLQL 513
BLAST of Lcy13g008360 vs. TAIR 10
Match:
AT5G06540.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 407.5 bits (1046), Expect = 1.6e-113
Identity = 204/529 (38.56%), Postives = 334/529 (63.14%), Query Frame = 0
Query: 7 ISLLDRCKSMAELKTIHALLFTFGLSQDDAIVSKLLSF-----SALSPAGDPDYSYKLLL 66
++LL C S ++LK IH L L D + S+LL+ + P Y+Y +
Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75
Query: 67 NLPNPTTFNWNTLIRGFSNTRNPNRSITVFVKMLRNGVSPDYLTYPFLAKASAKLLNRQL 126
+ NP F +N LIR FS P+++ + +ML++ + PD +T+PFL KAS+++ +
Sbjct: 76 QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLV 135
Query: 127 GMAVHVHVAKTGHEVDRFVQNSLIHMYASCGDIASARKVFDEMPTKNLVSWNAMLDGYAK 186
G H + + G + D +V+NSL+HMYA+CG IA+A ++F +M +++VSW +M+ GY K
Sbjct: 136 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCK 195
Query: 187 CGDVNTAREVFDLMPDKDVVSWSSLIDGYVKGGEYGEAMALFERMRFAGPMANEVTLVSA 246
CG V ARE+FD MP +++ +WS +I+GY K + +A+ LFE M+ G +ANE +VS
Sbjct: 196 CGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSV 255
Query: 247 LCACAHLGALEQGRMMHHYIVENELPLTIVLQTSLVDMYAKCGAVHEALAVFRSCSLQRT 306
+ +CAHLGALE G + Y+V++ + + ++L T+LVDM+ +CG + +A+ VF L T
Sbjct: 256 ISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFE--GLPET 315
Query: 307 DVLIWNAIIGGLATHGLIKESIDLFSEMQMVGIVPDEITYLCLLSCCAHGGLVKEAWYFF 366
D L W++II GLA HG +++ FS+M +G +P ++T+ +LS C+HGGLV++ +
Sbjct: 316 DSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIY 375
Query: 367 DCLHK-HGMTPKVEHYACMVDVLSRAGQVSEAYQFLCQMPVQPTSSMLGAILSGCMKYGK 426
+ + K HG+ P++EHY C+VD+L RAG+++EA F+ +M V+P + +LGA+L C Y
Sbjct: 376 ENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKN 435
Query: 427 LDLAEVVGRRLVALDPDHDGRYVGLSNIYAVDKRWDDARNIREAMEKRGVKKSPGFSFVE 486
++AE VG L+ + P+H G YV LSNIYA +WD ++R+ M+++ VKK PG+S +E
Sbjct: 436 TEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIE 495
Query: 487 VFGILHRF-IAHDKTHGDSEQIYMMLNLIIDQMKPIKYSENQ-DYYLDV 528
+ G +++F + D+ H + +I I+ +++ I Y N D + DV
Sbjct: 496 IDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDV 542
BLAST of Lcy13g008360 vs. TAIR 10
Match:
AT2G22410.1 (SLOW GROWTH 1 )
HSP 1 Score: 385.6 bits (989), Expect = 6.5e-107
Identity = 221/613 (36.05%), Postives = 322/613 (52.53%), Query Frame = 0
Query: 6 LISLLDRCKSMAELKTIHALLFTFGLSQDDAIVSKLLSFSALSPAGDPDYSYKLLLNLPN 65
L+SLL++CK + LK I A + GL D S+L++F ALS + DYS K+L + N
Sbjct: 56 LLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIEN 115
Query: 66 PTTFNWNTLIRGFSNTRNPNRSITVFVKMLRNGV---SPDYLTYPFLAKASAKLLNRQLG 125
P F+WN IRGFS + NP S ++ +MLR+G PD+ TYP L K A L LG
Sbjct: 116 PNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLG 175
Query: 126 MAVHVHVAKTGHEVDRFVQNSLIHMYASCGDIASARKVFDEMPTKNLVSWNAMLDGY--- 185
+ HV K E+ V N+ IHM+ASCGD+ +ARKVFDE P ++LVSWN +++GY
Sbjct: 176 HMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKI 235
Query: 186 ------------------------------------------------------------ 245
Sbjct: 236 GEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLV 295
Query: 246 -------AKCGDVNTAREVFDLMPDKDVVSWSSLIDGYVKGG------------------ 305
+KCGD++ AR +FD + + +VSW+++I GY + G
Sbjct: 296 NALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVV 355
Query: 306 -------------EYGEAMALFERMRFAGPMANEVTLVSALCACAHLGALEQGRMMHHYI 365
+A+ALF+ M+ + +E+T++ L AC+ LGAL+ G +H YI
Sbjct: 356 LWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYI 415
Query: 366 VENELPLTIVLQTSLVDMYAKCGAVHEALAVFRSCSLQRTDVLIWNAIIGGLATHGLIKE 425
+ L L + L TSLVDMYAKCG + EAL+VF +Q + L + AIIGGLA HG
Sbjct: 416 EKYSLSLNVALGTSLVDMYAKCGNISEALSVFH--GIQTRNSLTYTAIIGGLALHGDAST 475
Query: 426 SIDLFSEMQMVGIVPDEITYLCLLSCCAHGGLVKEAW-YFFDCLHKHGMTPKVEHYACMV 485
+I F+EM GI PDEIT++ LLS C HGG+++ YF + + P+++HY+ MV
Sbjct: 476 AISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMV 535
Query: 486 DVLSRAGQVSEAYQFLCQMPVQPTSSMLGAILSGCMKYGKLDLAEVVGRRLVALDPDHDG 514
D+L RAG + EA + + MP++ +++ GA+L GC +G ++L E ++L+ LDP G
Sbjct: 536 DLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSG 595
BLAST of Lcy13g008360 vs. TAIR 10
Match:
AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 382.1 bits (980), Expect = 7.2e-106
Identity = 195/497 (39.24%), Postives = 301/497 (60.56%), Query Frame = 0
Query: 7 ISLLDRCKSMAELKTIHALLFTFGLSQDDAIVSKLLSFSALSPAGD-PDYSYKLLLNLPN 66
+S L RC ELK IHA + GL QD ++K LSF S + D Y+ +
Sbjct: 18 MSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDR 77
Query: 67 PTTFNWNTLIRGFSNTRNPNRSITVFVKMLRNGVSPDYLTYPFLAKASAKLLNRQLGMAV 126
P TF WN +IRGFS + P RS+ ++ +ML + + T+P L KA + L + +
Sbjct: 78 PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQI 137
Query: 127 HVHVAKTGHEVDRFVQNSLIHMYASCGDIASARKVFDEMPTKNLVSWNAMLDGYAKCGDV 186
H + K G+E D + NSLI+ YA G+ A +FD +P + VSWN+++ GY K G +
Sbjct: 138 HAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKM 197
Query: 187 NTAREVFDLMPDKDVVSWSSLIDGYVKGGEYGEAMALFERMRFAGPMANEVTLVSALCAC 246
+ A +F M +K+ +SW+++I GYV+ EA+ LF M+ + + V+L +AL AC
Sbjct: 198 DIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSAC 257
Query: 247 AHLGALEQGRMMHHYIVENELPLTIVLQTSLVDMYAKCGAVHEALAVFRSCSLQRTDVLI 306
A LGALEQG+ +H Y+ + + + VL L+DMYAKCG + EAL VF+ ++++ V
Sbjct: 258 AQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFK--NIKKKSVQA 317
Query: 307 WNAIIGGLATHGLIKESIDLFSEMQMVGIVPDEITYLCLLSCCAHGGLVKEAWYFFDCLH 366
W A+I G A HG +E+I F EMQ +GI P+ IT+ +L+ C++ GLV+E F +
Sbjct: 318 WTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSME 377
Query: 367 K-HGMTPKVEHYACMVDVLSRAGQVSEAYQFLCQMPVQPTSSMLGAILSGCMKYGKLDLA 426
+ + + P +EHY C+VD+L RAG + EA +F+ +MP++P + + GA+L C + ++L
Sbjct: 378 RDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELG 437
Query: 427 EVVGRRLVALDPDHDGRYVGLSNIYAVDKRWDDARNIREAMEKRGVKKSPGFSFVEVFGI 486
E +G L+A+DP H GRYV +NI+A+DK+WD A R M+++GV K PG S + + G
Sbjct: 438 EEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGT 497
Query: 487 LHRFIAHDKTHGDSEQI 502
H F+A D++H + E+I
Sbjct: 498 THEFLAGDRSHPEIEKI 512
BLAST of Lcy13g008360 vs. TAIR 10
Match:
AT3G62890.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 368.6 bits (945), Expect = 8.3e-102
Identity = 191/472 (40.47%), Postives = 297/472 (62.92%), Query Frame = 0
Query: 68 TFNWNTLIRGF-SNTRNPNR--SITVFVKMLRNGVSPDYLTYPFLAKASAKLLNRQLGMA 127
+F WN +IR N +P R I+V+++M + VSPD+ T+PFL + L+ LG
Sbjct: 24 SFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQR 83
Query: 128 VHVHVAKTGHEVDRFVQNSLIHMYASCGDIASARKVFDEMPTKNLVSWNAMLDGYAKCGD 187
H + G + D FV+ SL++MY+SCGD+ SA++VFD+ +K+L +WN++++ YAK G
Sbjct: 84 THAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGL 143
Query: 188 VNTAREVFDLMPDKDVVSWSSLIDGYVKGGEYGEAMALFERMRFAGP-----MANEVTLV 247
++ AR++FD MP+++V+SWS LI+GYV G+Y EA+ LF M+ P NE T+
Sbjct: 144 IDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMS 203
Query: 248 SALCACAHLGALEQGRMMHHYIVENELPLTIVLQTSLVDMYAKCGAVHEALAVFRSCSLQ 307
+ L AC LGALEQG+ +H YI + + + IVL T+L+DMYAKCG++ A VF +
Sbjct: 204 TVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALG-S 263
Query: 308 RTDVLIWNAIIGGLATHGLIKESIDLFSEMQMV-GIVPDEITYLCLLSCCAHGGLVKEA- 367
+ DV ++A+I LA +GL E LFSEM I P+ +T++ +L C H GL+ E
Sbjct: 264 KKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGK 323
Query: 368 WYFFDCLHKHGMTPKVEHYACMVDVLSRAGQVSEAYQFLCQMPVQPTSSMLGAILSGCMK 427
YF + + G+TP ++HY CMVD+ R+G + EA F+ MP++P + G++LSG
Sbjct: 324 SYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRM 383
Query: 428 YGKLDLAEVVGRRLVALDPDHDGRYVGLSNIYAVDKRWDDARNIREAMEKRGVKKSPGFS 487
G + E +RL+ LDP + G YV LSN+YA RW + + IR ME +G+ K PG S
Sbjct: 384 LGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCS 443
Query: 488 FVEVFGILHRFIAHDKTHGDSEQIYMMLNLIIDQMKPIKY-SENQDYYLDVS 529
+VEV G++H F+ D++ +SE+IY ML+ I+ +++ Y ++ ++ LD++
Sbjct: 444 YVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLN 494
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P0C8Q7 | 1.2e-177 | 59.00 | Pentatricopeptide repeat-containing protein At5g08305 OS=Arabidopsis thaliana OX... | [more] |
Q9FG16 | 2.3e-112 | 38.56 | Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX... | [more] |
Q9SJZ3 | 9.2e-106 | 36.05 | Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidop... | [more] |
Q9FJY7 | 1.0e-104 | 39.24 | Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX... | [more] |
Q683I9 | 1.2e-100 | 40.47 | Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1FWL8 | 1.4e-279 | 90.42 | pentatricopeptide repeat-containing protein At5g08305 OS=Cucurbita moschata OX=3... | [more] |
A0A6J1JFS5 | 2.1e-278 | 89.85 | pentatricopeptide repeat-containing protein At5g08305 isoform X1 OS=Cucurbita ma... | [more] |
A0A6J1E1N1 | 5.2e-269 | 87.38 | pentatricopeptide repeat-containing protein At5g08305 OS=Momordica charantia OX=... | [more] |
A0A0A0KMZ3 | 9.1e-266 | 84.81 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G387410 PE=4 SV=1 | [more] |
A0A1S3CCZ9 | 3.5e-265 | 84.42 | pentatricopeptide repeat-containing protein At5g08305 OS=Cucumis melo OX=3656 GN... | [more] |
Match Name | E-value | Identity | Description | |
XP_023532676.1 | 2.7e-280 | 90.67 | pentatricopeptide repeat-containing protein At5g08305 isoform X1 [Cucurbita pepo... | [more] |
XP_022942610.1 | 3.0e-279 | 90.42 | pentatricopeptide repeat-containing protein At5g08305 [Cucurbita moschata] | [more] |
XP_022987941.1 | 4.3e-278 | 89.85 | pentatricopeptide repeat-containing protein At5g08305 isoform X1 [Cucurbita maxi... | [more] |
KAG6600119.1 | 1.3e-277 | 90.23 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
KAG7030791.1 | 2.1e-277 | 90.04 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |