Homology
BLAST of Lcy13g008220 vs. ExPASy Swiss-Prot
Match:
Q9LTV8 (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)
HSP 1 Score: 841.6 bits (2173), Expect = 6.1e-243
Identity = 393/674 (58.31%), Postives = 523/674 (77.60%), Query Frame = 0
Query: 20 SKVAATSHEALLRRKHLDQLYVQLIVSGLNKCGFLVIKFVNACLHLRDINYAHKAFREVL 79
S + + +H+A L+ Q++ +L+V GL GFL+ K ++A DI +A + F ++
Sbjct: 26 SLIDSATHKAQLK-----QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLP 85
Query: 80 EPDILLWNAIIKGYTQNNVVAGAIRLYTDMQVSGVHPDCFTFLYVLKACGGMSVEGIGKQ 139
P I WNAII+GY++NN A+ +Y++MQ++ V PD FTF ++LKAC G+S +G+
Sbjct: 86 RPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRF 145
Query: 140 MHGQTFKYGFGSNVFVQNSLVSMYAKFGQISSARMVFD--RLHNRTVVSWTSIISGYVQN 199
+H Q F+ GF ++VFVQN L+++YAK ++ SAR VF+ L RT+VSWT+I+S Y QN
Sbjct: 146 VHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQN 205
Query: 200 GDPVEALRVFKEMRQSNMKPDWIALVSVTTAYTDMEDLGQGKAIHGLVTKLGLEFEPDIV 259
G+P+EAL +F +MR+ ++KPDW+ALVSV A+T ++DL QG++IH V K+GLE EPD++
Sbjct: 206 GEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLL 265
Query: 260 VALTTMYAKRGQVEVARFFFNQMEKPNLILWNAMISGYAKNGYCEEAIKLFREMISKNIR 319
++L TMYAK GQV A+ F++M+ PNLILWNAMISGYAKNGY EAI +F EMI+K++R
Sbjct: 266 ISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVR 325
Query: 320 VDSVTVRSAILAGAQVGSLELARWLDGYICKSEYRDDTFVNTALIDMYAKCGSIYFARSV 379
D++++ SAI A AQVGSLE AR + Y+ +S+YRDD F+++ALIDM+AKCGS+ AR V
Sbjct: 326 PDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLV 385
Query: 380 FDRMVDKDIVLWSVMIMGYGLHGHGQEAISLYNEMKQAGVCPNDVTFVGLLTACKNAGLV 439
FDR +D+D+V+WS MI+GYGLHG +EAISLY M++ GV PNDVTF+GLL AC ++G+V
Sbjct: 386 FDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMV 445
Query: 440 KEGWELFHQMRDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSA 499
+EGW F++M DH I P QHY+CV+DLLGRAG+L+QAY+ I MP++PGV+VWGALLSA
Sbjct: 446 REGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 505
Query: 500 CKIHRQVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWDHVANVRLMMTQKGLNKDL 559
CK HR V LGE AA+QLF +DP NTGHYVQLSNLYA+A LWD VA VR+ M +KGLNKD+
Sbjct: 506 CKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDV 565
Query: 560 GHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLEKRLKAAGYVPHLDSVLHDLNHEEIE 619
G S +E+ G LE F VGD+SHPR +EI +++ +E RLK G+V + D+ LHDLN EE E
Sbjct: 566 GCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAE 625
Query: 620 ETLCNHSERLAVAYGIISTAPGTTLRITKNLRACVNCHSAIKLISKLVDREIIIRDAKRF 679
ETLC+HSER+A+AYG+IST GT LRITKNLRACVNCH+A KLISKLVDREI++RD RF
Sbjct: 626 ETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRF 685
Query: 680 HHFKDGDCSCGDFW 692
HHFKDG CSCGD+W
Sbjct: 686 HHFKDGVCSCGDYW 694
BLAST of Lcy13g008220 vs. ExPASy Swiss-Prot
Match:
Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)
HSP 1 Score: 556.6 bits (1433), Expect = 3.9e-157
Identity = 267/655 (40.76%), Postives = 415/655 (63.36%), Query Frame = 0
Query: 38 QLYVQLIVSGLNKCGFLVIKFVNACLHLRDINYAHKAFREVLEPDILLWNAIIKGYTQNN 97
+++ L+ SG + F + N R +N A K F + E D++ WN I+ GY+QN
Sbjct: 156 EIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNG 215
Query: 98 VVAGAIRLYTDMQVSGVHPDCFTFLYVLKACGGMSVEGIGKQMHGQTFKYGFGSNVFVQN 157
+ A+ + M + P T + VL A + + +GK++HG + GF S V +
Sbjct: 216 MARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIST 275
Query: 158 SLVSMYAKFGQISSARMVFDRLHNRTVVSWTSIISGYVQNGDPVEALRVFKEMRQSNMKP 217
+LV MYAK G + +AR +FD + R VVSW S+I YVQN +P EA+ +F++M +KP
Sbjct: 276 ALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKP 335
Query: 218 DWIALVSVTTAYTDMEDLGQGKAIHGLVTKLGLEFEPDIVVALTTMYAKRGQVEVARFFF 277
++++ A D+ DL +G+ IH L +LGL+ +V +L +MY K +V+ A F
Sbjct: 336 TDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMF 395
Query: 278 NQMEKPNLILWNAMISGYAKNGYCEEAIKLFREMISKNIRVDSVTVRSAILAGAQVGSLE 337
+++ L+ WNAMI G+A+NG +A+ F +M S+ ++ D+ T S I A A++
Sbjct: 396 GKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITH 455
Query: 338 LARWLDGYICKSEYRDDTFVNTALIDMYAKCGSIYFARSVFDRMVDKDIVLWSVMIMGYG 397
A+W+ G + +S + FV TAL+DMYAKCG+I AR +FD M ++ + W+ MI GYG
Sbjct: 456 HAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYG 515
Query: 398 LHGHGQEAISLYNEMKQAGVCPNDVTFVGLLTACKNAGLVKEGWELFHQMRD-HGIEPHH 457
HG G+ A+ L+ EM++ + PN VTF+ +++AC ++GLV+ G + F+ M++ + IE
Sbjct: 516 THGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSM 575
Query: 458 QHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRQVRLGEIAAEQLFI 517
HY +VDLLGRAG LN+A+DFIM MP+KP V+V+GA+L AC+IH+ V E AAE+LF
Sbjct: 576 DHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFE 635
Query: 518 LDPYNTGHYVQLSNLYASAHLWDHVANVRLMMTQKGLNKDLGHSSIEINGNLETFHVGDR 577
L+P + G++V L+N+Y +A +W+ V VR+ M ++GL K G S +EI + +F G
Sbjct: 636 LNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGST 695
Query: 578 SHPRSKEIFEELDRLEKRLKAAGYVPHLDSVLHDLNHEEIEETLCNHSERLAVAYGIIST 637
+HP SK+I+ L++L +K AGYVP + VL + ++ E+ L HSE+LA+++G+++T
Sbjct: 696 AHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNT 755
Query: 638 APGTTLRITKNLRACVNCHSAIKLISKLVDREIIIRDAKRFHHFKDGDCSCGDFW 692
GTT+ + KNLR C +CH+A K IS + REI++RD +RFHHFK+G CSCGD+W
Sbjct: 756 TAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
BLAST of Lcy13g008220 vs. ExPASy Swiss-Prot
Match:
Q9LW32 (Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H34 PE=2 SV=1)
HSP 1 Score: 535.8 bits (1379), Expect = 7.2e-151
Identity = 262/626 (41.85%), Postives = 399/626 (63.74%), Query Frame = 0
Query: 76 REVLEPDILLWNAIIKGYTQNNVVAGAIRLYTDMQVSGVHPDCFTFLYVLKACGGMSVEG 135
R V + D+ WN++I ++ A A+ ++ M+ ++P +F +KAC +
Sbjct: 34 RYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIF 93
Query: 136 IGKQMHGQTFKYGFGSNVFVQNSLVSMYAKFGQISSARMVFDRLHNRTVVSWTSIISGYV 195
GKQ H Q F +G+ S++FV ++L+ MY+ G++ AR VFD + R +VSWTS+I GY
Sbjct: 94 SGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYD 153
Query: 196 QNGDPVEALRVFKEM------RQSNMKPDWIALVSVTTAYTDMEDLGQGKAIHGLVTKLG 255
NG+ ++A+ +FK++ M D + LVSV +A + + G ++IH V K G
Sbjct: 154 LNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG 213
Query: 256 LEFEPDIVVALTTMYAKRGQ--VEVARFFFNQMEKPNLILWNAMISGYAKNGYCEEAIKL 315
+ + L YAK G+ V VAR F+Q+ + + +N+++S YA++G EA ++
Sbjct: 214 FDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEV 273
Query: 316 FREMI-SKNIRVDSVTVRSAILAGAQVGSLELARWLDGYICKSEYRDDTFVNTALIDMYA 375
FR ++ +K + +++T+ + +LA + G+L + + + + + DD V T++IDMY
Sbjct: 274 FRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYC 333
Query: 376 KCGSIYFARSVFDRMVDKDIVLWSVMIMGYGLHGHGQEAISLYNEMKQAGVCPNDVTFVG 435
KCG + AR FDRM +K++ W+ MI GYG+HGH +A+ L+ M +GV PN +TFV
Sbjct: 334 KCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVS 393
Query: 436 LLTACKNAGLVKEGWELFHQMRDH-GIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIK 495
+L AC +AGL EGW F+ M+ G+EP +HY C+VDLLGRAG+L +AYD I M +K
Sbjct: 394 VLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMK 453
Query: 496 PGVSVWGALLSACKIHRQVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWDHVANVR 555
P +W +LL+AC+IH+ V L EI+ +LF LD N G+Y+ LS++YA A W V VR
Sbjct: 454 PDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVR 513
Query: 556 LMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLEKRLKAAGYVPHLD 615
++M +GL K G S +E+NG + F +GD HP+ ++I+E L L ++L AGYV +
Sbjct: 514 MIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTS 573
Query: 616 SVLHDLNHEEIEETLCNHSERLAVAYGIISTAPGTTLRITKNLRACVNCHSAIKLISKLV 675
SV HD++ EE E TL HSE+LA+A+GI++T PG+T+ + KNLR C +CH+ IKLISK+V
Sbjct: 574 SVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIV 633
Query: 676 DREIIIRDAKRFHHFKDGDCSCGDFW 692
DRE ++RDAKRFHHFKDG CSCGD+W
Sbjct: 634 DREFVVRDAKRFHHFKDGGCSCGDYW 659
BLAST of Lcy13g008220 vs. ExPASy Swiss-Prot
Match:
Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)
HSP 1 Score: 530.0 bits (1364), Expect = 4.0e-149
Identity = 266/657 (40.49%), Postives = 395/657 (60.12%), Query Frame = 0
Query: 37 DQLYVQLIVSGLNKCGFLVIKFVNACLHLRDINYAHKAFREVLEPDILLWNAIIKGYTQN 96
+QL+ ++ SG + + V L + ++ A K F E+ E D++ WN+II GY N
Sbjct: 215 EQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSN 274
Query: 97 NVVAGAIRLYTDMQVSGVHPDCFTFLYVLKACGGMSVEGIGKQMHGQTFKYGFGSNVFVQ 156
+ + ++ M VSG+ D T + V C + +G+ +H K F
Sbjct: 275 GLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC 334
Query: 157 NSLVSMYAKFGQISSARMVFDRLHNRTVVSWTSIISGYVQNGDPVEALRVFKEMRQSNMK 216
N+L+ MY+K G + SA+ VF + +R+VVS+TS+I+GY + G EA+++F+EM + +
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394
Query: 217 PDWIALVSVTTAYTDMEDLGQGKAIHGLVTKLGLEFEPDIVVALTTMYAKRGQVEVARFF 276
PD + +V L +GK +H + + L F+ + AL MYAK G ++ A
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 454
Query: 277 FNQMEKPNLILWNAMISGYAKNGYCEEAIKLFREMI-SKNIRVDSVTVRSAILAGAQVGS 336
F++M ++I WN +I GY+KN Y EA+ LF ++ K D TV + A A + +
Sbjct: 455 FSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSA 514
Query: 337 LELARWLDGYICKSEYRDDTFVNTALIDMYAKCGSIYFARSVFDRMVDKDIVLWSVMIMG 396
+ R + GYI ++ Y D V +L+DMYAKCG++ A +FD + KD+V W+VMI G
Sbjct: 515 FDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAG 574
Query: 397 YGLHGHGQEAISLYNEMKQAGVCPNDVTFVGLLTACKNAGLVKEGWELFHQMR-DHGIEP 456
YG+HG G+EAI+L+N+M+QAG+ ++++FV LL AC ++GLV EGW F+ MR + IEP
Sbjct: 575 YGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEP 634
Query: 457 HHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRQVRLGEIAAEQL 516
+HY+C+VD+L R G L +AY FI +MPI P ++WGALL C+IH V+L E AE++
Sbjct: 635 TVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKV 694
Query: 517 FILDPYNTGHYVQLSNLYASAHLWDHVANVRLMMTQKGLNKDLGHSSIEINGNLETFHVG 576
F L+P NTG+YV ++N+YA A W+ V +R + Q+GL K+ G S IEI G + F G
Sbjct: 695 FELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAG 754
Query: 577 DRSHPRSKEIFEELDRLEKRLKAAGYVPHLDSVLHDLNHEEIEETLCNHSERLAVAYGII 636
D S+P ++ I L ++ R+ GY P L D E EE LC HSE+LA+A GII
Sbjct: 755 DSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGII 814
Query: 637 STAPGTTLRITKNLRACVNCHSAIKLISKLVDREIIIRDAKRFHHFKDGDCSCGDFW 692
S+ G +R+TKNLR C +CH K +SKL REI++RD+ RFH FKDG CSC FW
Sbjct: 815 SSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
BLAST of Lcy13g008220 vs. ExPASy Swiss-Prot
Match:
Q9LW63 (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H32 PE=3 SV=1)
HSP 1 Score: 526.6 bits (1355), Expect = 4.4e-148
Identity = 278/717 (38.77%), Postives = 421/717 (58.72%), Query Frame = 0
Query: 14 SLSTALSKVAATSHEALLRRKHLDQLYVQLI-VSGLNKCGFLVIKFVNACLHLRDINYAH 73
S S AL K + + + QL+ Q I L+ ++ ++ +L+ ++ A
Sbjct: 2 SSSKALIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIV--ISIYTNLKLLHEAL 61
Query: 74 KAFREVLEPDILLWNAIIKGYTQNNVVAGAIRLYTDMQVSGVHPDCFTFLYVLKACGGMS 133
F+ + P +L W ++I+ +T ++ + A+ + +M+ SG PD F VLK+C M
Sbjct: 62 LLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMM 121
Query: 134 VEGIGKQMHGQTFKYGFGSNVFVQNSLVSMYAK--------------------------- 193
G+ +HG + G +++ N+L++MYAK
Sbjct: 122 DLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDE 181
Query: 194 ----------FGQISSARMVFDRLHNRTVVSWTSIISGYVQNGDPVEALRVFKEMRQSNM 253
FG I S R VF+ + + VVS+ +II+GY Q+G +ALR+ +EM +++
Sbjct: 182 DVKAETCIMPFG-IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDL 241
Query: 254 KPDWIALVSVTTAYTDMEDLGQGKAIHGLVTKLGLEFEPDIVVALTTMYAKRGQVEVARF 313
KPD L SV +++ D+ +GK IHG V + G++ + I +L MYAK ++E +
Sbjct: 242 KPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSER 301
Query: 314 FFNQMEKPNLILWNAMISGYAKNGYCEEAIKLFREMISKNIRVDSVTVRSAILAGAQVGS 373
F+++ + I WN++++GY +NG EA++LFR+M++ ++ +V S I A A + +
Sbjct: 302 VFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLAT 361
Query: 374 LELARWLDGYICKSEYRDDTFVNTALIDMYAKCGSIYFARSVFDRMVDKDIVLWSVMIMG 433
L L + L GY+ + + + F+ +AL+DMY+KCG+I AR +FDRM D V W+ +IMG
Sbjct: 362 LHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMG 421
Query: 434 YGLHGHGQEAISLYNEMKQAGVCPNDVTFVGLLTACKNAGLVKEGWELFHQM-RDHGIEP 493
+ LHGHG EA+SL+ EMK+ GV PN V FV +LTAC + GLV E W F+ M + +G+
Sbjct: 422 HALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQ 481
Query: 494 HHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRQVRLGEIAAEQL 553
+HY+ V DLLGRAG L +AY+FI M ++P SVW LLS+C +H+ + L E AE++
Sbjct: 482 ELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKI 541
Query: 554 FILDPYNTGHYVQLSNLYASAHLWDHVANVRLMMTQKGLNKDLGHSSIEINGNLETFHVG 613
F +D N G YV + N+YAS W +A +RL M +KGL K S IE+ F G
Sbjct: 542 FTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSG 601
Query: 614 DRSHPRSKEIFEELDRLEKRLKAAGYVPHLDSVLHDLNHEEIEETLCNHSERLAVAYGII 673
DRSHP +I E L + ++++ GYV VLHD++ E E L HSERLAVA+GII
Sbjct: 602 DRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGII 661
Query: 674 STAPGTTLRITKNLRACVNCHSAIKLISKLVDREIIIRDAKRFHHFKDGDCSCGDFW 692
+T PGTT+R+TKN+R C +CH AIK ISK+ +REII+RD RFHHF G+CSCGD+W
Sbjct: 662 NTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
BLAST of Lcy13g008220 vs. ExPASy TrEMBL
Match:
A0A6J1CD43 (pentatricopeptide repeat-containing protein At3g12770 OS=Momordica charantia OX=3673 GN=LOC111010106 PE=3 SV=1)
HSP 1 Score: 1296.2 bits (3353), Expect = 0.0e+00
Identity = 630/691 (91.17%), Postives = 662/691 (95.80%), Query Frame = 0
Query: 1 MSLHSFSLSLSLSSLSTALSKVAATSHEALLRRKHLDQLYVQLIVSGLNKCGFLVIKFVN 60
MSLHSFSLSLSLSSLSTA SK+AATS EALL RKHLDQLYVQLIVSGL+KC FLVIKFVN
Sbjct: 1 MSLHSFSLSLSLSSLSTAFSKLAATSQEALLGRKHLDQLYVQLIVSGLHKCRFLVIKFVN 60
Query: 61 ACLHLRDINYAHKAFREVLEPDILLWNAIIKGYTQNNVVAGAIRLYTDMQVSGVHPDCFT 120
ACLHL D+ YAHKAFREVLEPDILLWNA+IKGYTQNN+ GA++LYT+MQVSGVHPDCFT
Sbjct: 61 ACLHLGDVYYAHKAFREVLEPDILLWNAVIKGYTQNNIFVGAVKLYTEMQVSGVHPDCFT 120
Query: 121 FLYVLKACGGMSVEGIGKQMHGQTFKYGFGSNVFVQNSLVSMYAKFGQISSARMVFDRLH 180
FLYVLKACGGMS+E IGKQMHGQTFKYGFGSNVFVQNSLVSMYAKFGQ S AR+VFD+L
Sbjct: 121 FLYVLKACGGMSIEEIGKQMHGQTFKYGFGSNVFVQNSLVSMYAKFGQTSPARVVFDKLQ 180
Query: 181 NRTVVSWTSIISGYVQNGDPVEALRVFKEMRQSNMKPDWIALVSVTTAYTDMEDLGQGKA 240
+RTVVSWTSIISGYVQNGDP EAL VFK+MRQSN+K DWIALVSV TAYTDMEDLGQGK+
Sbjct: 181 DRTVVSWTSIISGYVQNGDPAEALSVFKKMRQSNVKLDWIALVSVMTAYTDMEDLGQGKS 240
Query: 241 IHGLVTKLGLEFEPDIVVALTTMYAKRGQVEVARFFFNQMEKPNLILWNAMISGYAKNGY 300
IHGLVTKLGLEFEPDIVV+LTTMYAKRGQVEVARFFFNQMEKPNL+LWNAMISGYAKNGY
Sbjct: 241 IHGLVTKLGLEFEPDIVVSLTTMYAKRGQVEVARFFFNQMEKPNLVLWNAMISGYAKNGY 300
Query: 301 CEEAIKLFREMISKNIRVDSVTVRSAILAGAQVGSLELARWLDGYICKSEYRDDTFVNTA 360
EEAIKLFREMISKNIRVDSVTVRSAILAGAQVGSL+LARWLDGYI KSEYRDDTFVNTA
Sbjct: 301 GEEAIKLFREMISKNIRVDSVTVRSAILAGAQVGSLDLARWLDGYISKSEYRDDTFVNTA 360
Query: 361 LIDMYAKCGSIYFARSVFDRMVDKDIVLWSVMIMGYGLHGHGQEAISLYNEMKQAGVCPN 420
LIDMYAKCGSIYFA VFDRMVDKD+VLWS MIMGYGLHGHG+EAI+LYN MKQ GV PN
Sbjct: 361 LIDMYAKCGSIYFASLVFDRMVDKDVVLWSAMIMGYGLHGHGKEAINLYNAMKQVGVRPN 420
Query: 421 DVTFVGLLTACKNAGLVKEGWELFHQMRDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIM 480
DVTFVGLLTACKN+GLVKEGW+LFH++RDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIM
Sbjct: 421 DVTFVGLLTACKNSGLVKEGWDLFHEIRDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIM 480
Query: 481 SMPIKPGVSVWGALLSACKIHRQVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWDH 540
+MPIKPGVSVWGALLSACKIHRQV+LGEIAAEQLF LDPYNTGHYVQLSNLYASAHLW+H
Sbjct: 481 NMPIKPGVSVWGALLSACKIHRQVKLGEIAAEQLFSLDPYNTGHYVQLSNLYASAHLWNH 540
Query: 541 VANVRLMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLEKRLKAAGY 600
VANVRLMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLE+RLKAAGY
Sbjct: 541 VANVRLMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLERRLKAAGY 600
Query: 601 VPHLDSVLHDLNHEEIEETLCNHSERLAVAYGIISTAPGTTLRITKNLRACVNCHSAIKL 660
+PH++SVLHDLNHEEIEETLCNHSERLAVAYGIISTAPGT LRIT NLRACVNCHSAIKL
Sbjct: 601 IPHMESVLHDLNHEEIEETLCNHSERLAVAYGIISTAPGTPLRITNNLRACVNCHSAIKL 660
Query: 661 ISKLVDREIIIRDAKRFHHFKDGDCSCGDFW 692
ISKLVDREIIIRDAKRFH FKDG CSCGDFW
Sbjct: 661 ISKLVDREIIIRDAKRFHRFKDGACSCGDFW 691
BLAST of Lcy13g008220 vs. ExPASy TrEMBL
Match:
A0A6J1FN08 (pentatricopeptide repeat-containing protein At3g12770 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111446929 PE=3 SV=1)
HSP 1 Score: 1294.3 bits (3348), Expect = 0.0e+00
Identity = 630/691 (91.17%), Postives = 659/691 (95.37%), Query Frame = 0
Query: 1 MSLHSFSLSLSLSSLSTALSKVAATSHEALLRRKHLDQLYVQLIVSGLNKCGFLVIKFVN 60
MSLHSFSLSLSLSSLSTALSK AATS EALLRRKHLDQLYVQLIVSGL KCGFLVIKFVN
Sbjct: 1 MSLHSFSLSLSLSSLSTALSKAAATSQEALLRRKHLDQLYVQLIVSGLYKCGFLVIKFVN 60
Query: 61 ACLHLRDINYAHKAFREVLEPDILLWNAIIKGYTQNNVVAGAIRLYTDMQVSGVHPDCFT 120
ACLHLRD+NYAHK FREVLEPDILLWN IIKGYTQNN+ AGAIR+Y DMQVSGV+PDCFT
Sbjct: 61 ACLHLRDVNYAHKVFREVLEPDILLWNGIIKGYTQNNIFAGAIRMYKDMQVSGVNPDCFT 120
Query: 121 FLYVLKACGGMSVEGIGKQMHGQTFKYGFGSNVFVQNSLVSMYAKFGQISSARMVFDRLH 180
FLYVLKACGGMSVEGIGKQMH QTFKYG GSNVFVQNSLVSMYA+FGQ SSAR+VFD+LH
Sbjct: 121 FLYVLKACGGMSVEGIGKQMHSQTFKYGLGSNVFVQNSLVSMYARFGQTSSARLVFDKLH 180
Query: 181 NRTVVSWTSIISGYVQNGDPVEALRVFKEMRQSNMKPDWIALVSVTTAYTDMEDLGQGKA 240
NRTVVSWTSIISGYVQNGDPV+ALRVFK+MR+S +K DWI LVSV TAYTDMEDLGQGKA
Sbjct: 181 NRTVVSWTSIISGYVQNGDPVDALRVFKDMRRSTVKLDWIVLVSVVTAYTDMEDLGQGKA 240
Query: 241 IHGLVTKLGLEFEPDIVVALTTMYAKRGQVEVARFFFNQMEKPNLILWNAMISGYAKNGY 300
IH LVTKLGLEFEPDIVV+LT MYAK G+VEVARFFFNQMEKPNL+LWNAMISGYAKNGY
Sbjct: 241 IHSLVTKLGLEFEPDIVVSLTNMYAKCGRVEVARFFFNQMEKPNLLLWNAMISGYAKNGY 300
Query: 301 CEEAIKLFREMISKNIRVDSVTVRSAILAGAQVGSLELARWLDGYICKSEYRDDTFVNTA 360
EEAI+LFR+MISKNI VDSVTVRSAILA AQ GSLELARWLDGYI KSEYRDD FVNTA
Sbjct: 301 GEEAIELFRKMISKNIGVDSVTVRSAILAVAQAGSLELARWLDGYISKSEYRDDVFVNTA 360
Query: 361 LIDMYAKCGSIYFARSVFDRMVDKDIVLWSVMIMGYGLHGHGQEAISLYNEMKQAGVCPN 420
LIDM+AKCGSI FAR VFDRMVDKD+VLWS MIMGYGLHGHGQEAI LYN MKQ+GVCPN
Sbjct: 361 LIDMHAKCGSICFARGVFDRMVDKDVVLWSAMIMGYGLHGHGQEAIDLYNRMKQSGVCPN 420
Query: 421 DVTFVGLLTACKNAGLVKEGWELFHQMRDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIM 480
+VTFVGLLTACKN+GLVKEGWELFHQMRDHGIEPHHQHYSCVVDLLGRAGYLN+AYDFIM
Sbjct: 421 NVTFVGLLTACKNSGLVKEGWELFHQMRDHGIEPHHQHYSCVVDLLGRAGYLNRAYDFIM 480
Query: 481 SMPIKPGVSVWGALLSACKIHRQVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWDH 540
SMPIKPGVSVWGALLS CKIHRQVRLGEIAAEQLF+LDPYNTGHYVQLSNLYASAHLW+H
Sbjct: 481 SMPIKPGVSVWGALLSGCKIHRQVRLGEIAAEQLFLLDPYNTGHYVQLSNLYASAHLWNH 540
Query: 541 VANVRLMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLEKRLKAAGY 600
V NVRLMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLE+RLKAAGY
Sbjct: 541 VGNVRLMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLERRLKAAGY 600
Query: 601 VPHLDSVLHDLNHEEIEETLCNHSERLAVAYGIISTAPGTTLRITKNLRACVNCHSAIKL 660
V H++SVLHDLNHEEIEETLCNHSERLAVAYGIISTAPGTTLRITKNLRACVNCHSAIKL
Sbjct: 601 VAHMESVLHDLNHEEIEETLCNHSERLAVAYGIISTAPGTTLRITKNLRACVNCHSAIKL 660
Query: 661 ISKLVDREIIIRDAKRFHHFKDGDCSCGDFW 692
ISKLVDREII+RDAKRFH+FKDG CSCGDFW
Sbjct: 661 ISKLVDREIIVRDAKRFHYFKDGVCSCGDFW 691
BLAST of Lcy13g008220 vs. ExPASy TrEMBL
Match:
A0A6J1JH82 (pentatricopeptide repeat-containing protein At3g12770 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485683 PE=3 SV=1)
HSP 1 Score: 1290.4 bits (3338), Expect = 0.0e+00
Identity = 629/691 (91.03%), Postives = 659/691 (95.37%), Query Frame = 0
Query: 1 MSLHSFSLSLSLSSLSTALSKVAATSHEALLRRKHLDQLYVQLIVSGLNKCGFLVIKFVN 60
MSLHSFSLSLSL+SLSTALSK AATS EALLRRKHLDQLYVQLIVSGL KCGFLVIKFVN
Sbjct: 1 MSLHSFSLSLSLTSLSTALSKAAATSQEALLRRKHLDQLYVQLIVSGLYKCGFLVIKFVN 60
Query: 61 ACLHLRDINYAHKAFREVLEPDILLWNAIIKGYTQNNVVAGAIRLYTDMQVSGVHPDCFT 120
ACLHLRD+NYAHK FREVLEPDILLWN IIKGYTQNN+ AGAIR+Y DMQVSGV+PDCFT
Sbjct: 61 ACLHLRDVNYAHKVFREVLEPDILLWNGIIKGYTQNNIFAGAIRMYKDMQVSGVNPDCFT 120
Query: 121 FLYVLKACGGMSVEGIGKQMHGQTFKYGFGSNVFVQNSLVSMYAKFGQISSARMVFDRLH 180
FLYVLKACGGMSVEGIGKQMH QTFKYGFGSNVFVQNSLVSMYA++GQ SSAR+VFD+LH
Sbjct: 121 FLYVLKACGGMSVEGIGKQMHSQTFKYGFGSNVFVQNSLVSMYARYGQTSSARLVFDKLH 180
Query: 181 NRTVVSWTSIISGYVQNGDPVEALRVFKEMRQSNMKPDWIALVSVTTAYTDMEDLGQGKA 240
NRTVVSWTSIISGYVQNGDP++ALRVFK+MRQS +K DWI LVSV TAYTDMEDLGQGKA
Sbjct: 181 NRTVVSWTSIISGYVQNGDPMDALRVFKDMRQSTVKLDWIVLVSVMTAYTDMEDLGQGKA 240
Query: 241 IHGLVTKLGLEFEPDIVVALTTMYAKRGQVEVARFFFNQMEKPNLILWNAMISGYAKNGY 300
IH LVTKLGLEFEPDIVV+LT MYAK G+VE+ARFFFNQMEKPNL+LWNAMISGYAKNGY
Sbjct: 241 IHSLVTKLGLEFEPDIVVSLTNMYAKLGRVEIARFFFNQMEKPNLLLWNAMISGYAKNGY 300
Query: 301 CEEAIKLFREMISKNIRVDSVTVRSAILAGAQVGSLELARWLDGYICKSEYRDDTFVNTA 360
EEAI+LFR+MISKNI VDSVTVRSAILA AQVGSLELARWLDGYI KSEYRDD FVNTA
Sbjct: 301 GEEAIELFRKMISKNIGVDSVTVRSAILAVAQVGSLELARWLDGYISKSEYRDDVFVNTA 360
Query: 361 LIDMYAKCGSIYFARSVFDRMVDKDIVLWSVMIMGYGLHGHGQEAISLYNEMKQAGVCPN 420
LIDM+AKCGSI FARSVFDRMVDKDIV WS MIMGYGLHGHGQEAI LYN MKQ+G+ PN
Sbjct: 361 LIDMHAKCGSICFARSVFDRMVDKDIVSWSAMIMGYGLHGHGQEAIDLYNRMKQSGIRPN 420
Query: 421 DVTFVGLLTACKNAGLVKEGWELFHQMRDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIM 480
DVTFVGLLTACKN+GLVKEGWELFHQM+DHGIEPHHQHYSCVVDLLGRAGYLN+AYDFIM
Sbjct: 421 DVTFVGLLTACKNSGLVKEGWELFHQMQDHGIEPHHQHYSCVVDLLGRAGYLNRAYDFIM 480
Query: 481 SMPIKPGVSVWGALLSACKIHRQVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWDH 540
SMPIKPGVSVWGALLS CKIHRQVRLGEIAAEQLF+LDPYNTGHYVQLSNLYASAHLW+
Sbjct: 481 SMPIKPGVSVWGALLSGCKIHRQVRLGEIAAEQLFLLDPYNTGHYVQLSNLYASAHLWNQ 540
Query: 541 VANVRLMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLEKRLKAAGY 600
VANVRLMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLE+RLKAAGY
Sbjct: 541 VANVRLMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLERRLKAAGY 600
Query: 601 VPHLDSVLHDLNHEEIEETLCNHSERLAVAYGIISTAPGTTLRITKNLRACVNCHSAIKL 660
V H++SVLHDLNHEEIEETLCNHSERLAVAYGIISTAPGTTLRITKNLRACVNCHSAIKL
Sbjct: 601 VAHMESVLHDLNHEEIEETLCNHSERLAVAYGIISTAPGTTLRITKNLRACVNCHSAIKL 660
Query: 661 ISKLVDREIIIRDAKRFHHFKDGDCSCGDFW 692
ISKLVDREIIIRD KRFHHFKDG CSCGDFW
Sbjct: 661 ISKLVDREIIIRDGKRFHHFKDGVCSCGDFW 691
BLAST of Lcy13g008220 vs. ExPASy TrEMBL
Match:
A0A6J1FLM1 (pentatricopeptide repeat-containing protein At3g12770 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446929 PE=3 SV=1)
HSP 1 Score: 1287.7 bits (3331), Expect = 0.0e+00
Identity = 630/697 (90.39%), Postives = 659/697 (94.55%), Query Frame = 0
Query: 1 MSLHSFSLSLSLSSLSTALSKVAATSHEALLR------RKHLDQLYVQLIVSGLNKCGFL 60
MSLHSFSLSLSLSSLSTALSK AATS EALLR RKHLDQLYVQLIVSGL KCGFL
Sbjct: 1 MSLHSFSLSLSLSSLSTALSKAAATSQEALLRSCNSSCRKHLDQLYVQLIVSGLYKCGFL 60
Query: 61 VIKFVNACLHLRDINYAHKAFREVLEPDILLWNAIIKGYTQNNVVAGAIRLYTDMQVSGV 120
VIKFVNACLHLRD+NYAHK FREVLEPDILLWN IIKGYTQNN+ AGAIR+Y DMQVSGV
Sbjct: 61 VIKFVNACLHLRDVNYAHKVFREVLEPDILLWNGIIKGYTQNNIFAGAIRMYKDMQVSGV 120
Query: 121 HPDCFTFLYVLKACGGMSVEGIGKQMHGQTFKYGFGSNVFVQNSLVSMYAKFGQISSARM 180
+PDCFTFLYVLKACGGMSVEGIGKQMH QTFKYG GSNVFVQNSLVSMYA+FGQ SSAR+
Sbjct: 121 NPDCFTFLYVLKACGGMSVEGIGKQMHSQTFKYGLGSNVFVQNSLVSMYARFGQTSSARL 180
Query: 181 VFDRLHNRTVVSWTSIISGYVQNGDPVEALRVFKEMRQSNMKPDWIALVSVTTAYTDMED 240
VFD+LHNRTVVSWTSIISGYVQNGDPV+ALRVFK+MR+S +K DWI LVSV TAYTDMED
Sbjct: 181 VFDKLHNRTVVSWTSIISGYVQNGDPVDALRVFKDMRRSTVKLDWIVLVSVVTAYTDMED 240
Query: 241 LGQGKAIHGLVTKLGLEFEPDIVVALTTMYAKRGQVEVARFFFNQMEKPNLILWNAMISG 300
LGQGKAIH LVTKLGLEFEPDIVV+LT MYAK G+VEVARFFFNQMEKPNL+LWNAMISG
Sbjct: 241 LGQGKAIHSLVTKLGLEFEPDIVVSLTNMYAKCGRVEVARFFFNQMEKPNLLLWNAMISG 300
Query: 301 YAKNGYCEEAIKLFREMISKNIRVDSVTVRSAILAGAQVGSLELARWLDGYICKSEYRDD 360
YAKNGY EEAI+LFR+MISKNI VDSVTVRSAILA AQ GSLELARWLDGYI KSEYRDD
Sbjct: 301 YAKNGYGEEAIELFRKMISKNIGVDSVTVRSAILAVAQAGSLELARWLDGYISKSEYRDD 360
Query: 361 TFVNTALIDMYAKCGSIYFARSVFDRMVDKDIVLWSVMIMGYGLHGHGQEAISLYNEMKQ 420
FVNTALIDM+AKCGSI FAR VFDRMVDKD+VLWS MIMGYGLHGHGQEAI LYN MKQ
Sbjct: 361 VFVNTALIDMHAKCGSICFARGVFDRMVDKDVVLWSAMIMGYGLHGHGQEAIDLYNRMKQ 420
Query: 421 AGVCPNDVTFVGLLTACKNAGLVKEGWELFHQMRDHGIEPHHQHYSCVVDLLGRAGYLNQ 480
+GVCPN+VTFVGLLTACKN+GLVKEGWELFHQMRDHGIEPHHQHYSCVVDLLGRAGYLN+
Sbjct: 421 SGVCPNNVTFVGLLTACKNSGLVKEGWELFHQMRDHGIEPHHQHYSCVVDLLGRAGYLNR 480
Query: 481 AYDFIMSMPIKPGVSVWGALLSACKIHRQVRLGEIAAEQLFILDPYNTGHYVQLSNLYAS 540
AYDFIMSMPIKPGVSVWGALLS CKIHRQVRLGEIAAEQLF+LDPYNTGHYVQLSNLYAS
Sbjct: 481 AYDFIMSMPIKPGVSVWGALLSGCKIHRQVRLGEIAAEQLFLLDPYNTGHYVQLSNLYAS 540
Query: 541 AHLWDHVANVRLMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLEKR 600
AHLW+HV NVRLMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLE+R
Sbjct: 541 AHLWNHVGNVRLMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLERR 600
Query: 601 LKAAGYVPHLDSVLHDLNHEEIEETLCNHSERLAVAYGIISTAPGTTLRITKNLRACVNC 660
LKAAGYV H++SVLHDLNHEEIEETLCNHSERLAVAYGIISTAPGTTLRITKNLRACVNC
Sbjct: 601 LKAAGYVAHMESVLHDLNHEEIEETLCNHSERLAVAYGIISTAPGTTLRITKNLRACVNC 660
Query: 661 HSAIKLISKLVDREIIIRDAKRFHHFKDGDCSCGDFW 692
HSAIKLISKLVDREII+RDAKRFH+FKDG CSCGDFW
Sbjct: 661 HSAIKLISKLVDREIIVRDAKRFHYFKDGVCSCGDFW 697
BLAST of Lcy13g008220 vs. ExPASy TrEMBL
Match:
A0A6J1JD09 (pentatricopeptide repeat-containing protein At3g12770 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485683 PE=3 SV=1)
HSP 1 Score: 1283.9 bits (3321), Expect = 0.0e+00
Identity = 629/697 (90.24%), Postives = 659/697 (94.55%), Query Frame = 0
Query: 1 MSLHSFSLSLSLSSLSTALSKVAATSHEALLR------RKHLDQLYVQLIVSGLNKCGFL 60
MSLHSFSLSLSL+SLSTALSK AATS EALLR RKHLDQLYVQLIVSGL KCGFL
Sbjct: 1 MSLHSFSLSLSLTSLSTALSKAAATSQEALLRSCNSSCRKHLDQLYVQLIVSGLYKCGFL 60
Query: 61 VIKFVNACLHLRDINYAHKAFREVLEPDILLWNAIIKGYTQNNVVAGAIRLYTDMQVSGV 120
VIKFVNACLHLRD+NYAHK FREVLEPDILLWN IIKGYTQNN+ AGAIR+Y DMQVSGV
Sbjct: 61 VIKFVNACLHLRDVNYAHKVFREVLEPDILLWNGIIKGYTQNNIFAGAIRMYKDMQVSGV 120
Query: 121 HPDCFTFLYVLKACGGMSVEGIGKQMHGQTFKYGFGSNVFVQNSLVSMYAKFGQISSARM 180
+PDCFTFLYVLKACGGMSVEGIGKQMH QTFKYGFGSNVFVQNSLVSMYA++GQ SSAR+
Sbjct: 121 NPDCFTFLYVLKACGGMSVEGIGKQMHSQTFKYGFGSNVFVQNSLVSMYARYGQTSSARL 180
Query: 181 VFDRLHNRTVVSWTSIISGYVQNGDPVEALRVFKEMRQSNMKPDWIALVSVTTAYTDMED 240
VFD+LHNRTVVSWTSIISGYVQNGDP++ALRVFK+MRQS +K DWI LVSV TAYTDMED
Sbjct: 181 VFDKLHNRTVVSWTSIISGYVQNGDPMDALRVFKDMRQSTVKLDWIVLVSVMTAYTDMED 240
Query: 241 LGQGKAIHGLVTKLGLEFEPDIVVALTTMYAKRGQVEVARFFFNQMEKPNLILWNAMISG 300
LGQGKAIH LVTKLGLEFEPDIVV+LT MYAK G+VE+ARFFFNQMEKPNL+LWNAMISG
Sbjct: 241 LGQGKAIHSLVTKLGLEFEPDIVVSLTNMYAKLGRVEIARFFFNQMEKPNLLLWNAMISG 300
Query: 301 YAKNGYCEEAIKLFREMISKNIRVDSVTVRSAILAGAQVGSLELARWLDGYICKSEYRDD 360
YAKNGY EEAI+LFR+MISKNI VDSVTVRSAILA AQVGSLELARWLDGYI KSEYRDD
Sbjct: 301 YAKNGYGEEAIELFRKMISKNIGVDSVTVRSAILAVAQVGSLELARWLDGYISKSEYRDD 360
Query: 361 TFVNTALIDMYAKCGSIYFARSVFDRMVDKDIVLWSVMIMGYGLHGHGQEAISLYNEMKQ 420
FVNTALIDM+AKCGSI FARSVFDRMVDKDIV WS MIMGYGLHGHGQEAI LYN MKQ
Sbjct: 361 VFVNTALIDMHAKCGSICFARSVFDRMVDKDIVSWSAMIMGYGLHGHGQEAIDLYNRMKQ 420
Query: 421 AGVCPNDVTFVGLLTACKNAGLVKEGWELFHQMRDHGIEPHHQHYSCVVDLLGRAGYLNQ 480
+G+ PNDVTFVGLLTACKN+GLVKEGWELFHQM+DHGIEPHHQHYSCVVDLLGRAGYLN+
Sbjct: 421 SGIRPNDVTFVGLLTACKNSGLVKEGWELFHQMQDHGIEPHHQHYSCVVDLLGRAGYLNR 480
Query: 481 AYDFIMSMPIKPGVSVWGALLSACKIHRQVRLGEIAAEQLFILDPYNTGHYVQLSNLYAS 540
AYDFIMSMPIKPGVSVWGALLS CKIHRQVRLGEIAAEQLF+LDPYNTGHYVQLSNLYAS
Sbjct: 481 AYDFIMSMPIKPGVSVWGALLSGCKIHRQVRLGEIAAEQLFLLDPYNTGHYVQLSNLYAS 540
Query: 541 AHLWDHVANVRLMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLEKR 600
AHLW+ VANVRLMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLE+R
Sbjct: 541 AHLWNQVANVRLMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLERR 600
Query: 601 LKAAGYVPHLDSVLHDLNHEEIEETLCNHSERLAVAYGIISTAPGTTLRITKNLRACVNC 660
LKAAGYV H++SVLHDLNHEEIEETLCNHSERLAVAYGIISTAPGTTLRITKNLRACVNC
Sbjct: 601 LKAAGYVAHMESVLHDLNHEEIEETLCNHSERLAVAYGIISTAPGTTLRITKNLRACVNC 660
Query: 661 HSAIKLISKLVDREIIIRDAKRFHHFKDGDCSCGDFW 692
HSAIKLISKLVDREIIIRD KRFHHFKDG CSCGDFW
Sbjct: 661 HSAIKLISKLVDREIIIRDGKRFHHFKDGVCSCGDFW 697
BLAST of Lcy13g008220 vs. NCBI nr
Match:
XP_022139117.1 (pentatricopeptide repeat-containing protein At3g12770 [Momordica charantia] >XP_022139118.1 pentatricopeptide repeat-containing protein At3g12770 [Momordica charantia] >XP_022139119.1 pentatricopeptide repeat-containing protein At3g12770 [Momordica charantia])
HSP 1 Score: 1296.2 bits (3353), Expect = 0.0e+00
Identity = 630/691 (91.17%), Postives = 662/691 (95.80%), Query Frame = 0
Query: 1 MSLHSFSLSLSLSSLSTALSKVAATSHEALLRRKHLDQLYVQLIVSGLNKCGFLVIKFVN 60
MSLHSFSLSLSLSSLSTA SK+AATS EALL RKHLDQLYVQLIVSGL+KC FLVIKFVN
Sbjct: 1 MSLHSFSLSLSLSSLSTAFSKLAATSQEALLGRKHLDQLYVQLIVSGLHKCRFLVIKFVN 60
Query: 61 ACLHLRDINYAHKAFREVLEPDILLWNAIIKGYTQNNVVAGAIRLYTDMQVSGVHPDCFT 120
ACLHL D+ YAHKAFREVLEPDILLWNA+IKGYTQNN+ GA++LYT+MQVSGVHPDCFT
Sbjct: 61 ACLHLGDVYYAHKAFREVLEPDILLWNAVIKGYTQNNIFVGAVKLYTEMQVSGVHPDCFT 120
Query: 121 FLYVLKACGGMSVEGIGKQMHGQTFKYGFGSNVFVQNSLVSMYAKFGQISSARMVFDRLH 180
FLYVLKACGGMS+E IGKQMHGQTFKYGFGSNVFVQNSLVSMYAKFGQ S AR+VFD+L
Sbjct: 121 FLYVLKACGGMSIEEIGKQMHGQTFKYGFGSNVFVQNSLVSMYAKFGQTSPARVVFDKLQ 180
Query: 181 NRTVVSWTSIISGYVQNGDPVEALRVFKEMRQSNMKPDWIALVSVTTAYTDMEDLGQGKA 240
+RTVVSWTSIISGYVQNGDP EAL VFK+MRQSN+K DWIALVSV TAYTDMEDLGQGK+
Sbjct: 181 DRTVVSWTSIISGYVQNGDPAEALSVFKKMRQSNVKLDWIALVSVMTAYTDMEDLGQGKS 240
Query: 241 IHGLVTKLGLEFEPDIVVALTTMYAKRGQVEVARFFFNQMEKPNLILWNAMISGYAKNGY 300
IHGLVTKLGLEFEPDIVV+LTTMYAKRGQVEVARFFFNQMEKPNL+LWNAMISGYAKNGY
Sbjct: 241 IHGLVTKLGLEFEPDIVVSLTTMYAKRGQVEVARFFFNQMEKPNLVLWNAMISGYAKNGY 300
Query: 301 CEEAIKLFREMISKNIRVDSVTVRSAILAGAQVGSLELARWLDGYICKSEYRDDTFVNTA 360
EEAIKLFREMISKNIRVDSVTVRSAILAGAQVGSL+LARWLDGYI KSEYRDDTFVNTA
Sbjct: 301 GEEAIKLFREMISKNIRVDSVTVRSAILAGAQVGSLDLARWLDGYISKSEYRDDTFVNTA 360
Query: 361 LIDMYAKCGSIYFARSVFDRMVDKDIVLWSVMIMGYGLHGHGQEAISLYNEMKQAGVCPN 420
LIDMYAKCGSIYFA VFDRMVDKD+VLWS MIMGYGLHGHG+EAI+LYN MKQ GV PN
Sbjct: 361 LIDMYAKCGSIYFASLVFDRMVDKDVVLWSAMIMGYGLHGHGKEAINLYNAMKQVGVRPN 420
Query: 421 DVTFVGLLTACKNAGLVKEGWELFHQMRDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIM 480
DVTFVGLLTACKN+GLVKEGW+LFH++RDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIM
Sbjct: 421 DVTFVGLLTACKNSGLVKEGWDLFHEIRDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIM 480
Query: 481 SMPIKPGVSVWGALLSACKIHRQVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWDH 540
+MPIKPGVSVWGALLSACKIHRQV+LGEIAAEQLF LDPYNTGHYVQLSNLYASAHLW+H
Sbjct: 481 NMPIKPGVSVWGALLSACKIHRQVKLGEIAAEQLFSLDPYNTGHYVQLSNLYASAHLWNH 540
Query: 541 VANVRLMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLEKRLKAAGY 600
VANVRLMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLE+RLKAAGY
Sbjct: 541 VANVRLMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLERRLKAAGY 600
Query: 601 VPHLDSVLHDLNHEEIEETLCNHSERLAVAYGIISTAPGTTLRITKNLRACVNCHSAIKL 660
+PH++SVLHDLNHEEIEETLCNHSERLAVAYGIISTAPGT LRIT NLRACVNCHSAIKL
Sbjct: 601 IPHMESVLHDLNHEEIEETLCNHSERLAVAYGIISTAPGTPLRITNNLRACVNCHSAIKL 660
Query: 661 ISKLVDREIIIRDAKRFHHFKDGDCSCGDFW 692
ISKLVDREIIIRDAKRFH FKDG CSCGDFW
Sbjct: 661 ISKLVDREIIIRDAKRFHRFKDGACSCGDFW 691
BLAST of Lcy13g008220 vs. NCBI nr
Match:
XP_022941627.1 (pentatricopeptide repeat-containing protein At3g12770 isoform X2 [Cucurbita moschata])
HSP 1 Score: 1294.3 bits (3348), Expect = 0.0e+00
Identity = 630/691 (91.17%), Postives = 659/691 (95.37%), Query Frame = 0
Query: 1 MSLHSFSLSLSLSSLSTALSKVAATSHEALLRRKHLDQLYVQLIVSGLNKCGFLVIKFVN 60
MSLHSFSLSLSLSSLSTALSK AATS EALLRRKHLDQLYVQLIVSGL KCGFLVIKFVN
Sbjct: 1 MSLHSFSLSLSLSSLSTALSKAAATSQEALLRRKHLDQLYVQLIVSGLYKCGFLVIKFVN 60
Query: 61 ACLHLRDINYAHKAFREVLEPDILLWNAIIKGYTQNNVVAGAIRLYTDMQVSGVHPDCFT 120
ACLHLRD+NYAHK FREVLEPDILLWN IIKGYTQNN+ AGAIR+Y DMQVSGV+PDCFT
Sbjct: 61 ACLHLRDVNYAHKVFREVLEPDILLWNGIIKGYTQNNIFAGAIRMYKDMQVSGVNPDCFT 120
Query: 121 FLYVLKACGGMSVEGIGKQMHGQTFKYGFGSNVFVQNSLVSMYAKFGQISSARMVFDRLH 180
FLYVLKACGGMSVEGIGKQMH QTFKYG GSNVFVQNSLVSMYA+FGQ SSAR+VFD+LH
Sbjct: 121 FLYVLKACGGMSVEGIGKQMHSQTFKYGLGSNVFVQNSLVSMYARFGQTSSARLVFDKLH 180
Query: 181 NRTVVSWTSIISGYVQNGDPVEALRVFKEMRQSNMKPDWIALVSVTTAYTDMEDLGQGKA 240
NRTVVSWTSIISGYVQNGDPV+ALRVFK+MR+S +K DWI LVSV TAYTDMEDLGQGKA
Sbjct: 181 NRTVVSWTSIISGYVQNGDPVDALRVFKDMRRSTVKLDWIVLVSVVTAYTDMEDLGQGKA 240
Query: 241 IHGLVTKLGLEFEPDIVVALTTMYAKRGQVEVARFFFNQMEKPNLILWNAMISGYAKNGY 300
IH LVTKLGLEFEPDIVV+LT MYAK G+VEVARFFFNQMEKPNL+LWNAMISGYAKNGY
Sbjct: 241 IHSLVTKLGLEFEPDIVVSLTNMYAKCGRVEVARFFFNQMEKPNLLLWNAMISGYAKNGY 300
Query: 301 CEEAIKLFREMISKNIRVDSVTVRSAILAGAQVGSLELARWLDGYICKSEYRDDTFVNTA 360
EEAI+LFR+MISKNI VDSVTVRSAILA AQ GSLELARWLDGYI KSEYRDD FVNTA
Sbjct: 301 GEEAIELFRKMISKNIGVDSVTVRSAILAVAQAGSLELARWLDGYISKSEYRDDVFVNTA 360
Query: 361 LIDMYAKCGSIYFARSVFDRMVDKDIVLWSVMIMGYGLHGHGQEAISLYNEMKQAGVCPN 420
LIDM+AKCGSI FAR VFDRMVDKD+VLWS MIMGYGLHGHGQEAI LYN MKQ+GVCPN
Sbjct: 361 LIDMHAKCGSICFARGVFDRMVDKDVVLWSAMIMGYGLHGHGQEAIDLYNRMKQSGVCPN 420
Query: 421 DVTFVGLLTACKNAGLVKEGWELFHQMRDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIM 480
+VTFVGLLTACKN+GLVKEGWELFHQMRDHGIEPHHQHYSCVVDLLGRAGYLN+AYDFIM
Sbjct: 421 NVTFVGLLTACKNSGLVKEGWELFHQMRDHGIEPHHQHYSCVVDLLGRAGYLNRAYDFIM 480
Query: 481 SMPIKPGVSVWGALLSACKIHRQVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWDH 540
SMPIKPGVSVWGALLS CKIHRQVRLGEIAAEQLF+LDPYNTGHYVQLSNLYASAHLW+H
Sbjct: 481 SMPIKPGVSVWGALLSGCKIHRQVRLGEIAAEQLFLLDPYNTGHYVQLSNLYASAHLWNH 540
Query: 541 VANVRLMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLEKRLKAAGY 600
V NVRLMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLE+RLKAAGY
Sbjct: 541 VGNVRLMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLERRLKAAGY 600
Query: 601 VPHLDSVLHDLNHEEIEETLCNHSERLAVAYGIISTAPGTTLRITKNLRACVNCHSAIKL 660
V H++SVLHDLNHEEIEETLCNHSERLAVAYGIISTAPGTTLRITKNLRACVNCHSAIKL
Sbjct: 601 VAHMESVLHDLNHEEIEETLCNHSERLAVAYGIISTAPGTTLRITKNLRACVNCHSAIKL 660
Query: 661 ISKLVDREIIIRDAKRFHHFKDGDCSCGDFW 692
ISKLVDREII+RDAKRFH+FKDG CSCGDFW
Sbjct: 661 ISKLVDREIIVRDAKRFHYFKDGVCSCGDFW 691
BLAST of Lcy13g008220 vs. NCBI nr
Match:
XP_022988451.1 (pentatricopeptide repeat-containing protein At3g12770 isoform X2 [Cucurbita maxima])
HSP 1 Score: 1290.4 bits (3338), Expect = 0.0e+00
Identity = 629/691 (91.03%), Postives = 659/691 (95.37%), Query Frame = 0
Query: 1 MSLHSFSLSLSLSSLSTALSKVAATSHEALLRRKHLDQLYVQLIVSGLNKCGFLVIKFVN 60
MSLHSFSLSLSL+SLSTALSK AATS EALLRRKHLDQLYVQLIVSGL KCGFLVIKFVN
Sbjct: 1 MSLHSFSLSLSLTSLSTALSKAAATSQEALLRRKHLDQLYVQLIVSGLYKCGFLVIKFVN 60
Query: 61 ACLHLRDINYAHKAFREVLEPDILLWNAIIKGYTQNNVVAGAIRLYTDMQVSGVHPDCFT 120
ACLHLRD+NYAHK FREVLEPDILLWN IIKGYTQNN+ AGAIR+Y DMQVSGV+PDCFT
Sbjct: 61 ACLHLRDVNYAHKVFREVLEPDILLWNGIIKGYTQNNIFAGAIRMYKDMQVSGVNPDCFT 120
Query: 121 FLYVLKACGGMSVEGIGKQMHGQTFKYGFGSNVFVQNSLVSMYAKFGQISSARMVFDRLH 180
FLYVLKACGGMSVEGIGKQMH QTFKYGFGSNVFVQNSLVSMYA++GQ SSAR+VFD+LH
Sbjct: 121 FLYVLKACGGMSVEGIGKQMHSQTFKYGFGSNVFVQNSLVSMYARYGQTSSARLVFDKLH 180
Query: 181 NRTVVSWTSIISGYVQNGDPVEALRVFKEMRQSNMKPDWIALVSVTTAYTDMEDLGQGKA 240
NRTVVSWTSIISGYVQNGDP++ALRVFK+MRQS +K DWI LVSV TAYTDMEDLGQGKA
Sbjct: 181 NRTVVSWTSIISGYVQNGDPMDALRVFKDMRQSTVKLDWIVLVSVMTAYTDMEDLGQGKA 240
Query: 241 IHGLVTKLGLEFEPDIVVALTTMYAKRGQVEVARFFFNQMEKPNLILWNAMISGYAKNGY 300
IH LVTKLGLEFEPDIVV+LT MYAK G+VE+ARFFFNQMEKPNL+LWNAMISGYAKNGY
Sbjct: 241 IHSLVTKLGLEFEPDIVVSLTNMYAKLGRVEIARFFFNQMEKPNLLLWNAMISGYAKNGY 300
Query: 301 CEEAIKLFREMISKNIRVDSVTVRSAILAGAQVGSLELARWLDGYICKSEYRDDTFVNTA 360
EEAI+LFR+MISKNI VDSVTVRSAILA AQVGSLELARWLDGYI KSEYRDD FVNTA
Sbjct: 301 GEEAIELFRKMISKNIGVDSVTVRSAILAVAQVGSLELARWLDGYISKSEYRDDVFVNTA 360
Query: 361 LIDMYAKCGSIYFARSVFDRMVDKDIVLWSVMIMGYGLHGHGQEAISLYNEMKQAGVCPN 420
LIDM+AKCGSI FARSVFDRMVDKDIV WS MIMGYGLHGHGQEAI LYN MKQ+G+ PN
Sbjct: 361 LIDMHAKCGSICFARSVFDRMVDKDIVSWSAMIMGYGLHGHGQEAIDLYNRMKQSGIRPN 420
Query: 421 DVTFVGLLTACKNAGLVKEGWELFHQMRDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIM 480
DVTFVGLLTACKN+GLVKEGWELFHQM+DHGIEPHHQHYSCVVDLLGRAGYLN+AYDFIM
Sbjct: 421 DVTFVGLLTACKNSGLVKEGWELFHQMQDHGIEPHHQHYSCVVDLLGRAGYLNRAYDFIM 480
Query: 481 SMPIKPGVSVWGALLSACKIHRQVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWDH 540
SMPIKPGVSVWGALLS CKIHRQVRLGEIAAEQLF+LDPYNTGHYVQLSNLYASAHLW+
Sbjct: 481 SMPIKPGVSVWGALLSGCKIHRQVRLGEIAAEQLFLLDPYNTGHYVQLSNLYASAHLWNQ 540
Query: 541 VANVRLMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLEKRLKAAGY 600
VANVRLMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLE+RLKAAGY
Sbjct: 541 VANVRLMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLERRLKAAGY 600
Query: 601 VPHLDSVLHDLNHEEIEETLCNHSERLAVAYGIISTAPGTTLRITKNLRACVNCHSAIKL 660
V H++SVLHDLNHEEIEETLCNHSERLAVAYGIISTAPGTTLRITKNLRACVNCHSAIKL
Sbjct: 601 VAHMESVLHDLNHEEIEETLCNHSERLAVAYGIISTAPGTTLRITKNLRACVNCHSAIKL 660
Query: 661 ISKLVDREIIIRDAKRFHHFKDGDCSCGDFW 692
ISKLVDREIIIRD KRFHHFKDG CSCGDFW
Sbjct: 661 ISKLVDREIIIRDGKRFHHFKDGVCSCGDFW 691
BLAST of Lcy13g008220 vs. NCBI nr
Match:
XP_038892943.1 (pentatricopeptide repeat-containing protein At3g12770 [Benincasa hispida])
HSP 1 Score: 1289.6 bits (3336), Expect = 0.0e+00
Identity = 624/691 (90.30%), Postives = 662/691 (95.80%), Query Frame = 0
Query: 1 MSLHSFSLSLSLSSLSTALSKVAATSHEALLRRKHLDQLYVQLIVSGLNKCGFLVIKFVN 60
MSLHSFSLSLSLSSLS+ALSK A TSHEA LRRKHLDQLYVQLIVSGL+KCGFL+IKFVN
Sbjct: 1 MSLHSFSLSLSLSSLSSALSKSAITSHEASLRRKHLDQLYVQLIVSGLHKCGFLIIKFVN 60
Query: 61 ACLHLRDINYAHKAFREVLEPDILLWNAIIKGYTQNNVVAGAIRLYTDMQVSGVHPDCFT 120
+CLH D+NYAHKAFREV+EPDILLWNAIIKGYTQ N+ GAIR+Y DMQ+S V+P+CFT
Sbjct: 61 SCLHFGDVNYAHKAFREVVEPDILLWNAIIKGYTQKNIAGGAIRMYMDMQMSPVYPNCFT 120
Query: 121 FLYVLKACGGMSVEGIGKQMHGQTFKYGFGSNVFVQNSLVSMYAKFGQISSARMVFDRLH 180
FLYVLKAC GMSVEGIGKQMHGQTFKYGFGSNVFVQNSLVSMYAKFGQ SSAR+VFD+LH
Sbjct: 121 FLYVLKACDGMSVEGIGKQMHGQTFKYGFGSNVFVQNSLVSMYAKFGQTSSARIVFDKLH 180
Query: 181 NRTVVSWTSIISGYVQNGDPVEALRVFKEMRQSNMKPDWIALVSVTTAYTDMEDLGQGKA 240
+RTVVSWTSIISGYVQNGDPVEAL++FKEMRQ N+K DWI LVSV TAYTD+EDLGQGK+
Sbjct: 181 DRTVVSWTSIISGYVQNGDPVEALKIFKEMRQCNVKLDWIVLVSVMTAYTDVEDLGQGKS 240
Query: 241 IHGLVTKLGLEFEPDIVVALTTMYAKRGQVEVARFFFNQMEKPNLILWNAMISGYAKNGY 300
IHGLVTKLGLEFEPDIV++LTTMYAK G VE+ARFFFNQMEKPNLILWNAMISGYAKNGY
Sbjct: 241 IHGLVTKLGLEFEPDIVISLTTMYAKHGLVEIARFFFNQMEKPNLILWNAMISGYAKNGY 300
Query: 301 CEEAIKLFREMISKNIRVDSVTVRSAILAGAQVGSLELARWLDGYICKSEYRDDTFVNTA 360
EEAIKLF EMISKNIRVDSVTVRSAILAGAQVGSL+LARWLD YI +SEYRDDTFVNT+
Sbjct: 301 GEEAIKLFHEMISKNIRVDSVTVRSAILAGAQVGSLKLARWLDDYISESEYRDDTFVNTS 360
Query: 361 LIDMYAKCGSIYFARSVFDRMVDKDIVLWSVMIMGYGLHGHGQEAISLYNEMKQAGVCPN 420
L+DMYAKCGSIYFAR VFDRMV KD+VLWS MIMGYGLHGHGQEAI+ YNEMKQAGVCPN
Sbjct: 361 LVDMYAKCGSIYFARCVFDRMVVKDVVLWSAMIMGYGLHGHGQEAINHYNEMKQAGVCPN 420
Query: 421 DVTFVGLLTACKNAGLVKEGWELFHQMRDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIM 480
DVTFVGLLTACKN+GLVKEGWELFHQM+D+GIEPHHQHYSCVVDLLGRAGYLNQAYDFIM
Sbjct: 421 DVTFVGLLTACKNSGLVKEGWELFHQMQDYGIEPHHQHYSCVVDLLGRAGYLNQAYDFIM 480
Query: 481 SMPIKPGVSVWGALLSACKIHRQVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWDH 540
SMP+KPGVSVWGALLSACKIHR+VRLGEIAAEQLFILDPYN G++VQLSNLYASAHLW H
Sbjct: 481 SMPVKPGVSVWGALLSACKIHREVRLGEIAAEQLFILDPYNAGYHVQLSNLYASAHLWTH 540
Query: 541 VANVRLMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLEKRLKAAGY 600
VANVRLMMTQKGLNKDLGHSSI+INGNLETFHVGDRSHPRSKEIFEELDRLEKRLKAAGY
Sbjct: 541 VANVRLMMTQKGLNKDLGHSSIKINGNLETFHVGDRSHPRSKEIFEELDRLEKRLKAAGY 600
Query: 601 VPHLDSVLHDLNHEEIEETLCNHSERLAVAYGIISTAPGTTLRITKNLRACVNCHSAIKL 660
VPH++SVLHDLNHEEIEETLCNHSERLAVAYGIISTAPGTTLRITKNLRACVNCHSAIKL
Sbjct: 601 VPHMESVLHDLNHEEIEETLCNHSERLAVAYGIISTAPGTTLRITKNLRACVNCHSAIKL 660
Query: 661 ISKLVDREIIIRDAKRFHHFKDGDCSCGDFW 692
ISKLVDREIIIRDAKRFHHFKDG CSCGDFW
Sbjct: 661 ISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 691
BLAST of Lcy13g008220 vs. NCBI nr
Match:
XP_022941625.1 (pentatricopeptide repeat-containing protein At3g12770 isoform X1 [Cucurbita moschata] >XP_022941626.1 pentatricopeptide repeat-containing protein At3g12770 isoform X1 [Cucurbita moschata])
HSP 1 Score: 1287.7 bits (3331), Expect = 0.0e+00
Identity = 630/697 (90.39%), Postives = 659/697 (94.55%), Query Frame = 0
Query: 1 MSLHSFSLSLSLSSLSTALSKVAATSHEALLR------RKHLDQLYVQLIVSGLNKCGFL 60
MSLHSFSLSLSLSSLSTALSK AATS EALLR RKHLDQLYVQLIVSGL KCGFL
Sbjct: 1 MSLHSFSLSLSLSSLSTALSKAAATSQEALLRSCNSSCRKHLDQLYVQLIVSGLYKCGFL 60
Query: 61 VIKFVNACLHLRDINYAHKAFREVLEPDILLWNAIIKGYTQNNVVAGAIRLYTDMQVSGV 120
VIKFVNACLHLRD+NYAHK FREVLEPDILLWN IIKGYTQNN+ AGAIR+Y DMQVSGV
Sbjct: 61 VIKFVNACLHLRDVNYAHKVFREVLEPDILLWNGIIKGYTQNNIFAGAIRMYKDMQVSGV 120
Query: 121 HPDCFTFLYVLKACGGMSVEGIGKQMHGQTFKYGFGSNVFVQNSLVSMYAKFGQISSARM 180
+PDCFTFLYVLKACGGMSVEGIGKQMH QTFKYG GSNVFVQNSLVSMYA+FGQ SSAR+
Sbjct: 121 NPDCFTFLYVLKACGGMSVEGIGKQMHSQTFKYGLGSNVFVQNSLVSMYARFGQTSSARL 180
Query: 181 VFDRLHNRTVVSWTSIISGYVQNGDPVEALRVFKEMRQSNMKPDWIALVSVTTAYTDMED 240
VFD+LHNRTVVSWTSIISGYVQNGDPV+ALRVFK+MR+S +K DWI LVSV TAYTDMED
Sbjct: 181 VFDKLHNRTVVSWTSIISGYVQNGDPVDALRVFKDMRRSTVKLDWIVLVSVVTAYTDMED 240
Query: 241 LGQGKAIHGLVTKLGLEFEPDIVVALTTMYAKRGQVEVARFFFNQMEKPNLILWNAMISG 300
LGQGKAIH LVTKLGLEFEPDIVV+LT MYAK G+VEVARFFFNQMEKPNL+LWNAMISG
Sbjct: 241 LGQGKAIHSLVTKLGLEFEPDIVVSLTNMYAKCGRVEVARFFFNQMEKPNLLLWNAMISG 300
Query: 301 YAKNGYCEEAIKLFREMISKNIRVDSVTVRSAILAGAQVGSLELARWLDGYICKSEYRDD 360
YAKNGY EEAI+LFR+MISKNI VDSVTVRSAILA AQ GSLELARWLDGYI KSEYRDD
Sbjct: 301 YAKNGYGEEAIELFRKMISKNIGVDSVTVRSAILAVAQAGSLELARWLDGYISKSEYRDD 360
Query: 361 TFVNTALIDMYAKCGSIYFARSVFDRMVDKDIVLWSVMIMGYGLHGHGQEAISLYNEMKQ 420
FVNTALIDM+AKCGSI FAR VFDRMVDKD+VLWS MIMGYGLHGHGQEAI LYN MKQ
Sbjct: 361 VFVNTALIDMHAKCGSICFARGVFDRMVDKDVVLWSAMIMGYGLHGHGQEAIDLYNRMKQ 420
Query: 421 AGVCPNDVTFVGLLTACKNAGLVKEGWELFHQMRDHGIEPHHQHYSCVVDLLGRAGYLNQ 480
+GVCPN+VTFVGLLTACKN+GLVKEGWELFHQMRDHGIEPHHQHYSCVVDLLGRAGYLN+
Sbjct: 421 SGVCPNNVTFVGLLTACKNSGLVKEGWELFHQMRDHGIEPHHQHYSCVVDLLGRAGYLNR 480
Query: 481 AYDFIMSMPIKPGVSVWGALLSACKIHRQVRLGEIAAEQLFILDPYNTGHYVQLSNLYAS 540
AYDFIMSMPIKPGVSVWGALLS CKIHRQVRLGEIAAEQLF+LDPYNTGHYVQLSNLYAS
Sbjct: 481 AYDFIMSMPIKPGVSVWGALLSGCKIHRQVRLGEIAAEQLFLLDPYNTGHYVQLSNLYAS 540
Query: 541 AHLWDHVANVRLMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLEKR 600
AHLW+HV NVRLMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLE+R
Sbjct: 541 AHLWNHVGNVRLMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLERR 600
Query: 601 LKAAGYVPHLDSVLHDLNHEEIEETLCNHSERLAVAYGIISTAPGTTLRITKNLRACVNC 660
LKAAGYV H++SVLHDLNHEEIEETLCNHSERLAVAYGIISTAPGTTLRITKNLRACVNC
Sbjct: 601 LKAAGYVAHMESVLHDLNHEEIEETLCNHSERLAVAYGIISTAPGTTLRITKNLRACVNC 660
Query: 661 HSAIKLISKLVDREIIIRDAKRFHHFKDGDCSCGDFW 692
HSAIKLISKLVDREII+RDAKRFH+FKDG CSCGDFW
Sbjct: 661 HSAIKLISKLVDREIIVRDAKRFHYFKDGVCSCGDFW 697
BLAST of Lcy13g008220 vs. TAIR 10
Match:
AT3G12770.1 (mitochondrial editing factor 22 )
HSP 1 Score: 841.6 bits (2173), Expect = 4.4e-244
Identity = 393/674 (58.31%), Postives = 523/674 (77.60%), Query Frame = 0
Query: 20 SKVAATSHEALLRRKHLDQLYVQLIVSGLNKCGFLVIKFVNACLHLRDINYAHKAFREVL 79
S + + +H+A L+ Q++ +L+V GL GFL+ K ++A DI +A + F ++
Sbjct: 26 SLIDSATHKAQLK-----QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLP 85
Query: 80 EPDILLWNAIIKGYTQNNVVAGAIRLYTDMQVSGVHPDCFTFLYVLKACGGMSVEGIGKQ 139
P I WNAII+GY++NN A+ +Y++MQ++ V PD FTF ++LKAC G+S +G+
Sbjct: 86 RPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRF 145
Query: 140 MHGQTFKYGFGSNVFVQNSLVSMYAKFGQISSARMVFD--RLHNRTVVSWTSIISGYVQN 199
+H Q F+ GF ++VFVQN L+++YAK ++ SAR VF+ L RT+VSWT+I+S Y QN
Sbjct: 146 VHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQN 205
Query: 200 GDPVEALRVFKEMRQSNMKPDWIALVSVTTAYTDMEDLGQGKAIHGLVTKLGLEFEPDIV 259
G+P+EAL +F +MR+ ++KPDW+ALVSV A+T ++DL QG++IH V K+GLE EPD++
Sbjct: 206 GEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLL 265
Query: 260 VALTTMYAKRGQVEVARFFFNQMEKPNLILWNAMISGYAKNGYCEEAIKLFREMISKNIR 319
++L TMYAK GQV A+ F++M+ PNLILWNAMISGYAKNGY EAI +F EMI+K++R
Sbjct: 266 ISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVR 325
Query: 320 VDSVTVRSAILAGAQVGSLELARWLDGYICKSEYRDDTFVNTALIDMYAKCGSIYFARSV 379
D++++ SAI A AQVGSLE AR + Y+ +S+YRDD F+++ALIDM+AKCGS+ AR V
Sbjct: 326 PDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLV 385
Query: 380 FDRMVDKDIVLWSVMIMGYGLHGHGQEAISLYNEMKQAGVCPNDVTFVGLLTACKNAGLV 439
FDR +D+D+V+WS MI+GYGLHG +EAISLY M++ GV PNDVTF+GLL AC ++G+V
Sbjct: 386 FDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMV 445
Query: 440 KEGWELFHQMRDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSA 499
+EGW F++M DH I P QHY+CV+DLLGRAG+L+QAY+ I MP++PGV+VWGALLSA
Sbjct: 446 REGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 505
Query: 500 CKIHRQVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWDHVANVRLMMTQKGLNKDL 559
CK HR V LGE AA+QLF +DP NTGHYVQLSNLYA+A LWD VA VR+ M +KGLNKD+
Sbjct: 506 CKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDV 565
Query: 560 GHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLEKRLKAAGYVPHLDSVLHDLNHEEIE 619
G S +E+ G LE F VGD+SHPR +EI +++ +E RLK G+V + D+ LHDLN EE E
Sbjct: 566 GCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAE 625
Query: 620 ETLCNHSERLAVAYGIISTAPGTTLRITKNLRACVNCHSAIKLISKLVDREIIIRDAKRF 679
ETLC+HSER+A+AYG+IST GT LRITKNLRACVNCH+A KLISKLVDREI++RD RF
Sbjct: 626 ETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRF 685
Query: 680 HHFKDGDCSCGDFW 692
HHFKDG CSCGD+W
Sbjct: 686 HHFKDGVCSCGDYW 694
BLAST of Lcy13g008220 vs. TAIR 10
Match:
AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 556.6 bits (1433), Expect = 2.8e-158
Identity = 267/655 (40.76%), Postives = 415/655 (63.36%), Query Frame = 0
Query: 38 QLYVQLIVSGLNKCGFLVIKFVNACLHLRDINYAHKAFREVLEPDILLWNAIIKGYTQNN 97
+++ L+ SG + F + N R +N A K F + E D++ WN I+ GY+QN
Sbjct: 156 EIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNG 215
Query: 98 VVAGAIRLYTDMQVSGVHPDCFTFLYVLKACGGMSVEGIGKQMHGQTFKYGFGSNVFVQN 157
+ A+ + M + P T + VL A + + +GK++HG + GF S V +
Sbjct: 216 MARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIST 275
Query: 158 SLVSMYAKFGQISSARMVFDRLHNRTVVSWTSIISGYVQNGDPVEALRVFKEMRQSNMKP 217
+LV MYAK G + +AR +FD + R VVSW S+I YVQN +P EA+ +F++M +KP
Sbjct: 276 ALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKP 335
Query: 218 DWIALVSVTTAYTDMEDLGQGKAIHGLVTKLGLEFEPDIVVALTTMYAKRGQVEVARFFF 277
++++ A D+ DL +G+ IH L +LGL+ +V +L +MY K +V+ A F
Sbjct: 336 TDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMF 395
Query: 278 NQMEKPNLILWNAMISGYAKNGYCEEAIKLFREMISKNIRVDSVTVRSAILAGAQVGSLE 337
+++ L+ WNAMI G+A+NG +A+ F +M S+ ++ D+ T S I A A++
Sbjct: 396 GKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITH 455
Query: 338 LARWLDGYICKSEYRDDTFVNTALIDMYAKCGSIYFARSVFDRMVDKDIVLWSVMIMGYG 397
A+W+ G + +S + FV TAL+DMYAKCG+I AR +FD M ++ + W+ MI GYG
Sbjct: 456 HAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYG 515
Query: 398 LHGHGQEAISLYNEMKQAGVCPNDVTFVGLLTACKNAGLVKEGWELFHQMRD-HGIEPHH 457
HG G+ A+ L+ EM++ + PN VTF+ +++AC ++GLV+ G + F+ M++ + IE
Sbjct: 516 THGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSM 575
Query: 458 QHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRQVRLGEIAAEQLFI 517
HY +VDLLGRAG LN+A+DFIM MP+KP V+V+GA+L AC+IH+ V E AAE+LF
Sbjct: 576 DHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFE 635
Query: 518 LDPYNTGHYVQLSNLYASAHLWDHVANVRLMMTQKGLNKDLGHSSIEINGNLETFHVGDR 577
L+P + G++V L+N+Y +A +W+ V VR+ M ++GL K G S +EI + +F G
Sbjct: 636 LNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGST 695
Query: 578 SHPRSKEIFEELDRLEKRLKAAGYVPHLDSVLHDLNHEEIEETLCNHSERLAVAYGIIST 637
+HP SK+I+ L++L +K AGYVP + VL + ++ E+ L HSE+LA+++G+++T
Sbjct: 696 AHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNT 755
Query: 638 APGTTLRITKNLRACVNCHSAIKLISKLVDREIIIRDAKRFHHFKDGDCSCGDFW 692
GTT+ + KNLR C +CH+A K IS + REI++RD +RFHHFK+G CSCGD+W
Sbjct: 756 TAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
BLAST of Lcy13g008220 vs. TAIR 10
Match:
AT3G26782.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 535.8 bits (1379), Expect = 5.1e-152
Identity = 262/626 (41.85%), Postives = 399/626 (63.74%), Query Frame = 0
Query: 76 REVLEPDILLWNAIIKGYTQNNVVAGAIRLYTDMQVSGVHPDCFTFLYVLKACGGMSVEG 135
R V + D+ WN++I ++ A A+ ++ M+ ++P +F +KAC +
Sbjct: 34 RYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIF 93
Query: 136 IGKQMHGQTFKYGFGSNVFVQNSLVSMYAKFGQISSARMVFDRLHNRTVVSWTSIISGYV 195
GKQ H Q F +G+ S++FV ++L+ MY+ G++ AR VFD + R +VSWTS+I GY
Sbjct: 94 SGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYD 153
Query: 196 QNGDPVEALRVFKEM------RQSNMKPDWIALVSVTTAYTDMEDLGQGKAIHGLVTKLG 255
NG+ ++A+ +FK++ M D + LVSV +A + + G ++IH V K G
Sbjct: 154 LNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG 213
Query: 256 LEFEPDIVVALTTMYAKRGQ--VEVARFFFNQMEKPNLILWNAMISGYAKNGYCEEAIKL 315
+ + L YAK G+ V VAR F+Q+ + + +N+++S YA++G EA ++
Sbjct: 214 FDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEV 273
Query: 316 FREMI-SKNIRVDSVTVRSAILAGAQVGSLELARWLDGYICKSEYRDDTFVNTALIDMYA 375
FR ++ +K + +++T+ + +LA + G+L + + + + + DD V T++IDMY
Sbjct: 274 FRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYC 333
Query: 376 KCGSIYFARSVFDRMVDKDIVLWSVMIMGYGLHGHGQEAISLYNEMKQAGVCPNDVTFVG 435
KCG + AR FDRM +K++ W+ MI GYG+HGH +A+ L+ M +GV PN +TFV
Sbjct: 334 KCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVS 393
Query: 436 LLTACKNAGLVKEGWELFHQMRDH-GIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIK 495
+L AC +AGL EGW F+ M+ G+EP +HY C+VDLLGRAG+L +AYD I M +K
Sbjct: 394 VLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMK 453
Query: 496 PGVSVWGALLSACKIHRQVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWDHVANVR 555
P +W +LL+AC+IH+ V L EI+ +LF LD N G+Y+ LS++YA A W V VR
Sbjct: 454 PDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVR 513
Query: 556 LMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLEKRLKAAGYVPHLD 615
++M +GL K G S +E+NG + F +GD HP+ ++I+E L L ++L AGYV +
Sbjct: 514 MIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTS 573
Query: 616 SVLHDLNHEEIEETLCNHSERLAVAYGIISTAPGTTLRITKNLRACVNCHSAIKLISKLV 675
SV HD++ EE E TL HSE+LA+A+GI++T PG+T+ + KNLR C +CH+ IKLISK+V
Sbjct: 574 SVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIV 633
Query: 676 DREIIIRDAKRFHHFKDGDCSCGDFW 692
DRE ++RDAKRFHHFKDG CSCGD+W
Sbjct: 634 DREFVVRDAKRFHHFKDGGCSCGDYW 659
BLAST of Lcy13g008220 vs. TAIR 10
Match:
AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 530.0 bits (1364), Expect = 2.8e-150
Identity = 266/657 (40.49%), Postives = 395/657 (60.12%), Query Frame = 0
Query: 37 DQLYVQLIVSGLNKCGFLVIKFVNACLHLRDINYAHKAFREVLEPDILLWNAIIKGYTQN 96
+QL+ ++ SG + + V L + ++ A K F E+ E D++ WN+II GY N
Sbjct: 215 EQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSN 274
Query: 97 NVVAGAIRLYTDMQVSGVHPDCFTFLYVLKACGGMSVEGIGKQMHGQTFKYGFGSNVFVQ 156
+ + ++ M VSG+ D T + V C + +G+ +H K F
Sbjct: 275 GLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC 334
Query: 157 NSLVSMYAKFGQISSARMVFDRLHNRTVVSWTSIISGYVQNGDPVEALRVFKEMRQSNMK 216
N+L+ MY+K G + SA+ VF + +R+VVS+TS+I+GY + G EA+++F+EM + +
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394
Query: 217 PDWIALVSVTTAYTDMEDLGQGKAIHGLVTKLGLEFEPDIVVALTTMYAKRGQVEVARFF 276
PD + +V L +GK +H + + L F+ + AL MYAK G ++ A
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 454
Query: 277 FNQMEKPNLILWNAMISGYAKNGYCEEAIKLFREMI-SKNIRVDSVTVRSAILAGAQVGS 336
F++M ++I WN +I GY+KN Y EA+ LF ++ K D TV + A A + +
Sbjct: 455 FSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSA 514
Query: 337 LELARWLDGYICKSEYRDDTFVNTALIDMYAKCGSIYFARSVFDRMVDKDIVLWSVMIMG 396
+ R + GYI ++ Y D V +L+DMYAKCG++ A +FD + KD+V W+VMI G
Sbjct: 515 FDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAG 574
Query: 397 YGLHGHGQEAISLYNEMKQAGVCPNDVTFVGLLTACKNAGLVKEGWELFHQMR-DHGIEP 456
YG+HG G+EAI+L+N+M+QAG+ ++++FV LL AC ++GLV EGW F+ MR + IEP
Sbjct: 575 YGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEP 634
Query: 457 HHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRQVRLGEIAAEQL 516
+HY+C+VD+L R G L +AY FI +MPI P ++WGALL C+IH V+L E AE++
Sbjct: 635 TVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKV 694
Query: 517 FILDPYNTGHYVQLSNLYASAHLWDHVANVRLMMTQKGLNKDLGHSSIEINGNLETFHVG 576
F L+P NTG+YV ++N+YA A W+ V +R + Q+GL K+ G S IEI G + F G
Sbjct: 695 FELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAG 754
Query: 577 DRSHPRSKEIFEELDRLEKRLKAAGYVPHLDSVLHDLNHEEIEETLCNHSERLAVAYGII 636
D S+P ++ I L ++ R+ GY P L D E EE LC HSE+LA+A GII
Sbjct: 755 DSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGII 814
Query: 637 STAPGTTLRITKNLRACVNCHSAIKLISKLVDREIIIRDAKRFHHFKDGDCSCGDFW 692
S+ G +R+TKNLR C +CH K +SKL REI++RD+ RFH FKDG CSC FW
Sbjct: 815 SSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
BLAST of Lcy13g008220 vs. TAIR 10
Match:
AT3G23330.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 526.6 bits (1355), Expect = 3.1e-149
Identity = 278/717 (38.77%), Postives = 421/717 (58.72%), Query Frame = 0
Query: 14 SLSTALSKVAATSHEALLRRKHLDQLYVQLI-VSGLNKCGFLVIKFVNACLHLRDINYAH 73
S S AL K + + + QL+ Q I L+ ++ ++ +L+ ++ A
Sbjct: 2 SSSKALIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIV--ISIYTNLKLLHEAL 61
Query: 74 KAFREVLEPDILLWNAIIKGYTQNNVVAGAIRLYTDMQVSGVHPDCFTFLYVLKACGGMS 133
F+ + P +L W ++I+ +T ++ + A+ + +M+ SG PD F VLK+C M
Sbjct: 62 LLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMM 121
Query: 134 VEGIGKQMHGQTFKYGFGSNVFVQNSLVSMYAK--------------------------- 193
G+ +HG + G +++ N+L++MYAK
Sbjct: 122 DLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDE 181
Query: 194 ----------FGQISSARMVFDRLHNRTVVSWTSIISGYVQNGDPVEALRVFKEMRQSNM 253
FG I S R VF+ + + VVS+ +II+GY Q+G +ALR+ +EM +++
Sbjct: 182 DVKAETCIMPFG-IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDL 241
Query: 254 KPDWIALVSVTTAYTDMEDLGQGKAIHGLVTKLGLEFEPDIVVALTTMYAKRGQVEVARF 313
KPD L SV +++ D+ +GK IHG V + G++ + I +L MYAK ++E +
Sbjct: 242 KPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSER 301
Query: 314 FFNQMEKPNLILWNAMISGYAKNGYCEEAIKLFREMISKNIRVDSVTVRSAILAGAQVGS 373
F+++ + I WN++++GY +NG EA++LFR+M++ ++ +V S I A A + +
Sbjct: 302 VFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLAT 361
Query: 374 LELARWLDGYICKSEYRDDTFVNTALIDMYAKCGSIYFARSVFDRMVDKDIVLWSVMIMG 433
L L + L GY+ + + + F+ +AL+DMY+KCG+I AR +FDRM D V W+ +IMG
Sbjct: 362 LHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMG 421
Query: 434 YGLHGHGQEAISLYNEMKQAGVCPNDVTFVGLLTACKNAGLVKEGWELFHQM-RDHGIEP 493
+ LHGHG EA+SL+ EMK+ GV PN V FV +LTAC + GLV E W F+ M + +G+
Sbjct: 422 HALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQ 481
Query: 494 HHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRQVRLGEIAAEQL 553
+HY+ V DLLGRAG L +AY+FI M ++P SVW LLS+C +H+ + L E AE++
Sbjct: 482 ELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKI 541
Query: 554 FILDPYNTGHYVQLSNLYASAHLWDHVANVRLMMTQKGLNKDLGHSSIEINGNLETFHVG 613
F +D N G YV + N+YAS W +A +RL M +KGL K S IE+ F G
Sbjct: 542 FTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSG 601
Query: 614 DRSHPRSKEIFEELDRLEKRLKAAGYVPHLDSVLHDLNHEEIEETLCNHSERLAVAYGII 673
DRSHP +I E L + ++++ GYV VLHD++ E E L HSERLAVA+GII
Sbjct: 602 DRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGII 661
Query: 674 STAPGTTLRITKNLRACVNCHSAIKLISKLVDREIIIRDAKRFHHFKDGDCSCGDFW 692
+T PGTT+R+TKN+R C +CH AIK ISK+ +REII+RD RFHHF G+CSCGD+W
Sbjct: 662 NTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9LTV8 | 6.1e-243 | 58.31 | Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX... | [more] |
Q3E6Q1 | 3.9e-157 | 40.76 | Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... | [more] |
Q9LW32 | 7.2e-151 | 41.85 | Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidop... | [more] |
Q9SN39 | 4.0e-149 | 40.49 | Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... | [more] |
Q9LW63 | 4.4e-148 | 38.77 | Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis th... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1CD43 | 0.0e+00 | 91.17 | pentatricopeptide repeat-containing protein At3g12770 OS=Momordica charantia OX=... | [more] |
A0A6J1FN08 | 0.0e+00 | 91.17 | pentatricopeptide repeat-containing protein At3g12770 isoform X2 OS=Cucurbita mo... | [more] |
A0A6J1JH82 | 0.0e+00 | 91.03 | pentatricopeptide repeat-containing protein At3g12770 isoform X2 OS=Cucurbita ma... | [more] |
A0A6J1FLM1 | 0.0e+00 | 90.39 | pentatricopeptide repeat-containing protein At3g12770 isoform X1 OS=Cucurbita mo... | [more] |
A0A6J1JD09 | 0.0e+00 | 90.24 | pentatricopeptide repeat-containing protein At3g12770 isoform X1 OS=Cucurbita ma... | [more] |
Match Name | E-value | Identity | Description | |
XP_022139117.1 | 0.0e+00 | 91.17 | pentatricopeptide repeat-containing protein At3g12770 [Momordica charantia] >XP_... | [more] |
XP_022941627.1 | 0.0e+00 | 91.17 | pentatricopeptide repeat-containing protein At3g12770 isoform X2 [Cucurbita mosc... | [more] |
XP_022988451.1 | 0.0e+00 | 91.03 | pentatricopeptide repeat-containing protein At3g12770 isoform X2 [Cucurbita maxi... | [more] |
XP_038892943.1 | 0.0e+00 | 90.30 | pentatricopeptide repeat-containing protein At3g12770 [Benincasa hispida] | [more] |
XP_022941625.1 | 0.0e+00 | 90.39 | pentatricopeptide repeat-containing protein At3g12770 isoform X1 [Cucurbita mosc... | [more] |
Match Name | E-value | Identity | Description | |
AT3G12770.1 | 4.4e-244 | 58.31 | mitochondrial editing factor 22 | [more] |
AT1G11290.1 | 2.8e-158 | 40.76 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G26782.1 | 5.1e-152 | 41.85 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G18750.1 | 2.8e-150 | 40.49 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G23330.1 | 3.1e-149 | 38.77 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |