Homology
BLAST of Lcy13g008170 vs. ExPASy Swiss-Prot
Match:
Q9ZVX5 (Pentatricopeptide repeat-containing protein At2g16880 OS=Arabidopsis thaliana OX=3702 GN=At2g16880 PE=2 SV=1)
HSP 1 Score: 758.8 bits (1958), Expect = 5.9e-218
Identity = 387/730 (53.01%), Postives = 528/730 (72.33%), Query Frame = 0
Query: 20 ELIQTITRILTSTKAP-LSALAPYAAHLSPSLISSIFSSKALSSHPSVLLSLFKWAQKNV 79
+L++T+T ILTS K L L PY ++ L++S+ SS +L+ P L+S F+WAQ ++
Sbjct: 10 QLLKTLTSILTSEKTHFLETLNPYIPQITQPLLTSLLSSPSLAKKPETLVSFFQWAQTSI 69
Query: 80 PSFSSPPNNSLSSLLTLLPSLFSHNKFSDAKSLLVSFIAT-DRQHELHRLILHPTRGL-P 139
P + P++S L++++ SL SH+KF+DAKSLLVS+I T D L +LHP L P
Sbjct: 70 P--EAFPSDSPLPLISVVRSLLSHHKFADAKSLLVSYIRTSDASLSLCNSLLHPNLHLSP 129
Query: 140 RPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNTLLNSLVRYPSLNSILL 199
PSKAL D ++ AY+ GKPH+A QIF+KM RL +PNLLTCNTLL LVRYPS SI
Sbjct: 130 PPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISS 189
Query: 200 SREVFKDFVKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKM-GEFGCVPDNVSYNTIL 259
+REVF D VK+GV LN +FN+L+ GYCLE K +DAL ++ +M EF PDNV+YNTIL
Sbjct: 190 AREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTIL 249
Query: 260 DALCKKGQLHEARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLKEATKVIELMTQNNLL 319
A+ KKG+L + ++LLLDMK GL+PN+ TYN LV GYCKLG LKEA +++ELM Q N+L
Sbjct: 250 KAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVL 309
Query: 320 PDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLIDGCFEWRGSFEAYSL 379
PD+ TYN+LI+G CN G + E L D M+ +K+ PDVVTYNTLIDGCFE S EA L
Sbjct: 310 PDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKL 369
Query: 380 IEEMDKKGVKCNAVTYNIMLKWMCKEGNMNEATTTVQKM-EENGFSPDCVTYNTLINAYC 439
+E+M+ GVK N VT+NI LKW+CKE T V+++ + +GFSPD VTY+TLI AY
Sbjct: 370 MEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYL 429
Query: 440 KAGKMGEAFRMMDEMTRKGLKIDTCTLNTILHSLCGEKKLDEAYTLLCSASKRGYILDEV 499
K G + A MM EM +KG+K++T TLNTIL +LC E+KLDEA+ LL SA KRG+I+DEV
Sbjct: 430 KVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEV 489
Query: 500 SYGTLIMGYFKDEKANGALNLWDEMKERQIIPSIVTYNSIIGGLCQSGKTDQAIDKLNEL 559
+YGTLIMG+F++EK AL +WDEMK+ +I P++ T+NS+IGGLC GKT+ A++K +EL
Sbjct: 490 TYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDEL 549
Query: 560 LESGLVPDETTYNIIIHGYCWEGNVEKAFQFHNKMIENLFKPDVFTCNILLRGLCREGML 619
ESGL+PD++T+N II GYC EG VEKAF+F+N+ I++ FKPD +TCNILL GLC+EGM
Sbjct: 550 AESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMT 609
Query: 620 EKALKLFNTWVSKGKDIDVVTYNTLISSLCKEGKFENAYDLLTEMEEKKLGPDQYTYNAI 679
EKAL FNT + + +++D VTYNT+IS+ CK+ K + AYDLL+EMEEK L PD++TYN+
Sbjct: 610 EKALNFFNTLIEE-REVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSF 669
Query: 680 LGALTDAGRIKEAEEFMLKMVESGILHDQNLKLDKGQNVPTSGISEHFDSKSMDYSDQIK 739
+ L + G++ E +E + K ++L+++ +N TS E +++++ YSD I
Sbjct: 670 ISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVID 729
Query: 740 ELCNQHKYKD 745
ELC++ + K+
Sbjct: 730 ELCSRGRLKE 736
BLAST of Lcy13g008170 vs. ExPASy Swiss-Prot
Match:
Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)
HSP 1 Score: 313.9 bits (803), Expect = 5.0e-84
Identity = 207/676 (30.62%), Postives = 325/676 (48.08%), Query Frame = 0
Query: 45 HLSPSLISSIFSSKALSSH--PSVLLSLFKWAQKNVPSFSSPPNNSLSSLLTLLPSLFSH 104
HLS + S+ L S +++L WA N F +L L L
Sbjct: 41 HLSANFTPEAASNLLLKSQNDQALILKFLNWA--NPHQFF-----TLRCKCITLHILTKF 100
Query: 105 NKFSDAKSLLVSFIATDRQHELHRLI---LHPTRGLPRPSKALMDTSIGAYVQMGKPHLA 164
+ A+ L A E L+ L T L + ++ D + +Y ++ A
Sbjct: 101 KLYKTAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKA 160
Query: 165 AQIFKKMKRLNYRPNLLTCNTLLNSLVRYPSLNSILLSREVFKDFVKLGVVLNTNSFNIL 224
I + + P +L+ N +L++ +R S +I + VFK+ ++ V N ++NIL
Sbjct: 161 LSIVHLAQAHGFMPGVLSYNAVLDATIR--SKRNISFAENVFKEMLESQVSPNVFTYNIL 220
Query: 225 IYGYCLESKFKDALDLVNKMGEFGCVPDNVSYNTILDALCKKGQLHEARDLLLDMKNKGL 284
I G+C AL L +KM GC+P+ V+YNT++D CK ++ + LL M KGL
Sbjct: 221 IRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGL 280
Query: 285 LPNKNTYNILVSGYCKLGWLKEATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFR 344
PN +YN++++G C+ G +KE + V+ M + D TYN LI G+C +G +A
Sbjct: 281 EPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALV 340
Query: 345 LRDEMEKMKMLPDVVTYNTLIDGCFEWRGSFEAYSLIEEMDKKGVKCNAVTYNIMLKWMC 404
+ EM + + P V+TY +LI + A +++M +G+ N TY ++
Sbjct: 341 MHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFS 400
Query: 405 KEGNMNEATTTVQKMEENGFSPDCVTYNTLINAYCKAGKMGEAFRMMDEMTRKGLKIDTC 464
++G MNEA +++M +NGFSP VTYN LIN +C GKM +A ++++M KGL D
Sbjct: 401 QKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVV 460
Query: 465 TLNTILHSLCGEKKLDEAYTLLCSASKRGYILDEVSYGTLIMGYFKDEKANGALNLWDEM 524
+ +T+L C R Y +DE AL + EM
Sbjct: 461 SYSTVLSGFC-----------------RSYDVDE------------------ALRVKREM 520
Query: 525 KERQIIPSIVTYNSIIGGLCQSGKTDQAIDKLNELLESGLVPDETTYNIIIHGYCWEGNV 584
E+ I P +TY+S+I G C+ +T +A D E+L GL PDE TY +I+ YC EG++
Sbjct: 521 VEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDL 580
Query: 585 EKAFQFHNKMIENLFKPDVFTCNILLRGLCREGMLEKA----LKLF-----------NTW 644
EKA Q HN+M+E PDV T ++L+ GL ++ +A LKLF +T
Sbjct: 581 EKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTL 640
Query: 645 VSKGKDIDVVTYNTLISSLCKEGKFENAYDLLTEMEEKKLGPDQYTYNAILGALTDAGRI 701
+ +I+ + +LI C +G A + M K PD YN ++ AG I
Sbjct: 641 IENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDI 672
BLAST of Lcy13g008170 vs. ExPASy Swiss-Prot
Match:
Q9CAN0 (Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g63130 PE=2 SV=1)
HSP 1 Score: 310.5 bits (794), Expect = 5.6e-83
Identity = 167/531 (31.45%), Postives = 292/531 (54.99%), Query Frame = 0
Query: 159 AAQIFKKMKRLNYRPNLLTCNTLLNSLVRYPSLNSILLSREVFKDFVKLGVVLNTNSFNI 218
A +F M + P+++ + LL+++ + +N L + + LG+ N +++I
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAK---MNKFDLVISLGEQMQNLGISHNLYTYSI 124
Query: 219 LIYGYCLESKFKDALDLVNKMGEFGCVPDNVSYNTILDALCKKGQLHEARDLLLDMKNKG 278
LI +C S+ AL ++ KM + G PD V+ N++L+ C ++ +A L+ M G
Sbjct: 125 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 184
Query: 279 LLPNKNTYNILVSGYCKLGWLKEATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAF 338
P+ T+N L+ G + EA +++ M PD+ TY ++++G C G ID A
Sbjct: 185 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 244
Query: 339 RLRDEMEKMKMLPDVVTYNTLIDGCFEWRGSFEAYSLIEEMDKKGVKCNAVTYNIMLKWM 398
L +ME+ K+ P VV YNT+ID ++ +A +L EMD KG++ N VTYN +++ +
Sbjct: 245 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 304
Query: 399 CKEGNMNEATTTVQKMEENGFSPDCVTYNTLINAYCKAGKMGEAFRMMDEMTRKGLKIDT 458
C G ++A+ + M E +P+ VT++ LI+A+ K GK+ EA ++ DEM ++ + D
Sbjct: 305 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 364
Query: 459 CTLNTILHSLCGEKKLDEAYTLLCSASKRGYILDEVSYGTLIMGYFKDEKANGALNLWDE 518
T +++++ C +LDEA + + + V+Y TLI G+ K ++ + + L+ E
Sbjct: 365 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 424
Query: 519 MKERQIIPSIVTYNSIIGGLCQSGKTDQAIDKLNELLESGLVPDETTYNIIIHGYCWEGN 578
M +R ++ + VTY ++I G Q+ + D A +++ G++PD TY+I++ G C G
Sbjct: 425 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK 484
Query: 579 VEKAFQFHNKMIENLFKPDVFTCNILLRGLCREGMLEKALKLFNTWVSKGKDIDVVTYNT 638
VE A + + +PD++T NI++ G+C+ G +E LF + KG +VVTY T
Sbjct: 485 VETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 544
Query: 639 LISSLCKEGKFENAYDLLTEMEEKKLGPDQYTYNAILGA-LTDAGRIKEAE 689
++S C++G E A L EM+E+ PD TYN ++ A L D + AE
Sbjct: 545 MMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAE 592
BLAST of Lcy13g008170 vs. ExPASy Swiss-Prot
Match:
Q9LQ14 (Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g62930 PE=2 SV=2)
HSP 1 Score: 309.3 bits (791), Expect = 1.2e-82
Identity = 170/544 (31.25%), Postives = 294/544 (54.04%), Query Frame = 0
Query: 159 AAQIFKKMKRLNYRPNLLTCNTLLNSLVRYPSLNSILLSREVFKDFVKLGVVLNTNSFNI 218
A +F +M + P+++ N LL+++ + + ++ E ++ L + + S+NI
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQN---LRISYDLYSYNI 123
Query: 219 LIYGYCLESKFKDALDLVNKMGEFGCVPDNVSYNTILDALCKKGQLHEARDLLLDMKNKG 278
LI +C S+ AL ++ KM + G PD V+ +++L+ C ++ EA L+ M
Sbjct: 124 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 183
Query: 279 LLPNKNTYNILVSGYCKLGWLKEATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAF 338
PN T+N L+ G EA +I+ M PD++TY +++G C G ID A
Sbjct: 184 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 243
Query: 339 RLRDEMEKMKMLPDVVTYNTLIDGCFEWRGSFEAYSLIEEMDKKGVKCNAVTYNIMLKWM 398
L +MEK K+ DVV Y T+ID ++ +A +L EMD KG++ N VTYN +++ +
Sbjct: 244 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 303
Query: 399 CKEGNMNEATTTVQKMEENGFSPDCVTYNTLINAYCKAGKMGEAFRMMDEMTRKGLKIDT 458
C G ++A+ + M E +P+ VT++ LI+A+ K GK+ EA ++ DEM ++ + D
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363
Query: 459 CTLNTILHSLCGEKKLDEAYTLLCSASKRGYILDEVSYGTLIMGYFKDEKANGALNLWDE 518
T +++++ C +LDEA + + + V+Y TLI G+ K ++ + L+ E
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 423
Query: 519 MKERQIIPSIVTYNSIIGGLCQSGKTDQAIDKLNELLESGLVPDETTYNIIIHGYCWEGN 578
M +R ++ + VTYN++I GL Q+G D A +++ G+ PD TY+I++ G C G
Sbjct: 424 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 483
Query: 579 VEKAFQFHNKMIENLFKPDVFTCNILLRGLCREGMLEKALKLFNTWVSKGKDIDVVTYNT 638
+EKA + ++ +PD++T NI++ G+C+ G +E LF + KG +V+ Y T
Sbjct: 484 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 543
Query: 639 LISSLCKEGKFENAYDLLTEMEEKKLGPDQYTYNAILGALTDAGRIKEAEEFMLKMVESG 698
+IS C++G E A L EM+E P+ TYN ++ A G + E + +M G
Sbjct: 544 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 603
Query: 699 ILHD 703
+ D
Sbjct: 604 FVGD 604
BLAST of Lcy13g008170 vs. ExPASy Swiss-Prot
Match:
Q9SXD1 (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g62670 PE=3 SV=2)
HSP 1 Score: 308.9 bits (790), Expect = 1.6e-82
Identity = 167/544 (30.70%), Postives = 294/544 (54.04%), Query Frame = 0
Query: 159 AAQIFKKMKRLNYRPNLLTCNTLLNSLVRYPSLNSILLSREVFKDFVKLGVVLNTNSFNI 218
A +F +M + P+++ + LL+++ + + ++ E ++ LG+ N +++I
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQN---LGIPHNHYTYSI 124
Query: 219 LIYGYCLESKFKDALDLVNKMGEFGCVPDNVSYNTILDALCKKGQLHEARDLLLDMKNKG 278
LI +C S+ AL ++ KM + G P+ V+ +++L+ C ++ EA L+ M G
Sbjct: 125 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 184
Query: 279 LLPNKNTYNILVSGYCKLGWLKEATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAF 338
PN T+N L+ G EA +I+ M PD+ TY ++++G C G D AF
Sbjct: 185 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 244
Query: 339 RLRDEMEKMKMLPDVVTYNTLIDGCFEWRGSFEAYSLIEEMDKKGVKCNAVTYNIMLKWM 398
L ++ME+ K+ P V+ YNT+IDG +++ +A +L +EM+ KG++ N VTY+ ++ +
Sbjct: 245 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 304
Query: 399 CKEGNMNEATTTVQKMEENGFSPDCVTYNTLINAYCKAGKMGEAFRMMDEMTRKGLKIDT 458
C G ++A+ + M E +PD T++ LI+A+ K GK+ EA ++ DEM ++ +
Sbjct: 305 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 364
Query: 459 CTLNTILHSLCGEKKLDEAYTLLCSASKRGYILDEVSYGTLIMGYFKDEKANGALNLWDE 518
T +++++ C +LDEA + + D V+Y TLI G+ K ++ + ++ E
Sbjct: 365 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 424
Query: 519 MKERQIIPSIVTYNSIIGGLCQSGKTDQAIDKLNELLESGLVPDETTYNIIIHGYCWEGN 578
M +R ++ + VTYN +I GL Q+G D A + E++ G+ P+ TYN ++ G C G
Sbjct: 425 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 484
Query: 579 VEKAFQFHNKMIENLFKPDVFTCNILLRGLCREGMLEKALKLFNTWVSKGKDIDVVTYNT 638
+EKA + + +P ++T NI++ G+C+ G +E LF KG DVV YNT
Sbjct: 485 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNT 544
Query: 639 LISSLCKEGKFENAYDLLTEMEEKKLGPDQYTYNAILGALTDAGRIKEAEEFMLKMVESG 698
+IS C++G E A L EM+E P+ YN ++ A G + + E + +M G
Sbjct: 545 MISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 604
Query: 699 ILHD 703
D
Sbjct: 605 FAGD 605
BLAST of Lcy13g008170 vs. ExPASy TrEMBL
Match:
A0A6J1J3F6 (pentatricopeptide repeat-containing protein At2g16880 OS=Cucurbita maxima OX=3661 GN=LOC111482294 PE=4 SV=1)
HSP 1 Score: 1464.1 bits (3789), Expect = 0.0e+00
Identity = 726/784 (92.60%), Postives = 748/784 (95.41%), Query Frame = 0
Query: 1 METPPISNQRQTQQENQAQELIQTITRILTSTKAPLSALAPYAAHLSPSLISSIFSSKAL 60
METP ISNQR ELIQTIT ILTSTKAPL+ALAPYAAHLSPSL+SSI SSKAL
Sbjct: 1 METPSISNQR-------PPELIQTITTILTSTKAPLTALAPYAAHLSPSLVSSILSSKAL 60
Query: 61 SSHPSVLLSLFKWAQKNVPSFSSPPNNSLSSLLTLLPSLFSHNKFSDAKSLLVSFIATDR 120
SSHP++LLSLFKWAQK+VPSFSSPPNNSLSSL T+LPSLFSHNKFSDAKSLLVSFIA DR
Sbjct: 61 SSHPTILLSLFKWAQKHVPSFSSPPNNSLSSLFTILPSLFSHNKFSDAKSLLVSFIADDR 120
Query: 121 QHELHRLILHPTRGLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNT 180
QHELH+LILHPTR LPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNT
Sbjct: 121 QHELHKLILHPTRDLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNT 180
Query: 181 LLNSLVRYPSLNSILLSREVFKDFVKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKMG 240
LLNSLVRYPSLNSILLSREVFKD VKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKMG
Sbjct: 181 LLNSLVRYPSLNSILLSREVFKDSVKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKMG 240
Query: 241 EFGCVPDNVSYNTILDALCKKGQLHEARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK 300
EFGCVPDNVSYNTILDALCKKGQLHEARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK
Sbjct: 241 EFGCVPDNVSYNTILDALCKKGQLHEARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK 300
Query: 301 EATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLI 360
EATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLI
Sbjct: 301 EATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLI 360
Query: 361 DGCFEWRGSFEAYSLIEEMDKKGVKCNAVTYNIMLKWMCKEGNMNEATTTVQKMEENGFS 420
DGCFEWRGS EAY LIEEMDKKG+KCNA+TYNIMLKWMCKEGNMNEAT TVQKMEENGFS
Sbjct: 361 DGCFEWRGSSEAYCLIEEMDKKGLKCNAITYNIMLKWMCKEGNMNEATNTVQKMEENGFS 420
Query: 421 PDCVTYNTLINAYCKAGKMGEAFRMMDEMTRKGLKIDTCTLNTILHSLCGEKKLDEAYTL 480
PDCVTYNTLINAYCK GKMGEAF+MMD+MTRKGLKIDTCTLNTILHSLCGEKKLDEAY L
Sbjct: 421 PDCVTYNTLINAYCKDGKMGEAFKMMDKMTRKGLKIDTCTLNTILHSLCGEKKLDEAYKL 480
Query: 481 LCSASKRGYILDEVSYGTLIMGYFKDEKANGALNLWDEMKERQIIPSIVTYNSIIGGLCQ 540
LCSASKRGYI+DE+SYGTLIMGYFKDEK N AL+LWDEMKERQI+PSIVTYNS+IGGLCQ
Sbjct: 481 LCSASKRGYIIDEISYGTLIMGYFKDEKENRALSLWDEMKERQILPSIVTYNSVIGGLCQ 540
Query: 541 SGKTDQAIDKLNELLESGLVPDETTYNIIIHGYCWEGNVEKAFQFHNKMIENLFKPDVFT 600
SGKTDQAIDKLNELLESGLVPDETTYNIIIHGYCWEGNVEKAFQFHNKM+EN FKPDVFT
Sbjct: 541 SGKTDQAIDKLNELLESGLVPDETTYNIIIHGYCWEGNVEKAFQFHNKMVENFFKPDVFT 600
Query: 601 CNILLRGLCREGMLEKALKLFNTWVSKGKDIDVVTYNTLISSLCKEGKFENAYDLLTEME 660
CNILL GLCREGMLEKALKLFNTWVSKGKDIDVVTYNTLISSLCKEGKFENAYDLLT+ME
Sbjct: 601 CNILLCGLCREGMLEKALKLFNTWVSKGKDIDVVTYNTLISSLCKEGKFENAYDLLTDME 660
Query: 661 EKKLGPDQYTYNAILGALTDAGRIKEAEEFMLKMVESGILHDQNLKLDKGQNVPTSGISE 720
EKKL PD+YTYNAILGALTDA RI EAE+FMLKMVESG LHDQN KLDKGQ+V TS I E
Sbjct: 661 EKKLEPDKYTYNAILGALTDAARINEAEKFMLKMVESGKLHDQNFKLDKGQSVATSEIPE 720
Query: 721 HFDSKSMDYSDQIKELCNQHKYKDAMHLFDEVTKKGVVLNKYTYLSLMEGLIKRRKSTSK 780
H DSKSM YSDQI ELCNQHKYKDAMHLFDEVTKKGVVLN+YTYLSLMEGLIKRRKSTSK
Sbjct: 721 HIDSKSMAYSDQINELCNQHKYKDAMHLFDEVTKKGVVLNRYTYLSLMEGLIKRRKSTSK 777
Query: 781 ASRS 785
ASRS
Sbjct: 781 ASRS 777
BLAST of Lcy13g008170 vs. ExPASy TrEMBL
Match:
A0A6J1CB67 (pentatricopeptide repeat-containing protein At2g16880 OS=Momordica charantia OX=3673 GN=LOC111010061 PE=4 SV=1)
HSP 1 Score: 1458.0 bits (3773), Expect = 0.0e+00
Identity = 725/784 (92.47%), Postives = 750/784 (95.66%), Query Frame = 0
Query: 1 METPPISNQRQTQQENQAQELIQTITRILTSTKAPLSALAPYAAHLSPSLISSIFSSKAL 60
METP NQR QEN+ +ELIQTIT ILTS++APLSAL PYAAHLSPSLI SIFSS+ L
Sbjct: 1 METPTTPNQRLMPQENRPEELIQTITTILTSSRAPLSALGPYAAHLSPSLICSIFSSRVL 60
Query: 61 SSHPSVLLSLFKWAQKNVPSFSSPPNNSLSSLLTLLPSLFSHNKFSDAKSLLVSFIATDR 120
+S PSVLLS FKWAQK+VP+FSSPPNNSL+SLLTLLPSLFSHNKFSDAKSLLVSFIA+DR
Sbjct: 61 NSRPSVLLSFFKWAQKHVPAFSSPPNNSLTSLLTLLPSLFSHNKFSDAKSLLVSFIASDR 120
Query: 121 QHELHRLILHPTRGLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNT 180
QH LHRLILHP+RGLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYR NLLTCNT
Sbjct: 121 QHNLHRLILHPSRGLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRLNLLTCNT 180
Query: 181 LLNSLVRYPSLNSILLSREVFKDFVKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKMG 240
LLNSLVRYPS NSILLSREVFKD +KLGVV NTNSFNILIYGYCLES+FKDALDLVNKMG
Sbjct: 181 LLNSLVRYPSSNSILLSREVFKDSIKLGVVPNTNSFNILIYGYCLESRFKDALDLVNKMG 240
Query: 241 EFGCVPDNVSYNTILDALCKKGQLHEARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK 300
EFGCVPDNVSYNTILDALCKKGQL+EARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK
Sbjct: 241 EFGCVPDNVSYNTILDALCKKGQLYEARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK 300
Query: 301 EATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLI 360
+ATKVIELMTQNNLLPDVWTYNMLISGF NDGKID+AFRLRDEMEKMKMLPDVVTYNTLI
Sbjct: 301 DATKVIELMTQNNLLPDVWTYNMLISGFVNDGKIDDAFRLRDEMEKMKMLPDVVTYNTLI 360
Query: 361 DGCFEWRGSFEAYSLIEEMDKKGVKCNAVTYNIMLKWMCKEGNMNEATTTVQKMEENGFS 420
DGCFEWRGS EA +LIEEMDKKGVKCNAVTYNIMLKWMCKEGNMNEATTTVQKMEENGFS
Sbjct: 361 DGCFEWRGSSEANNLIEEMDKKGVKCNAVTYNIMLKWMCKEGNMNEATTTVQKMEENGFS 420
Query: 421 PDCVTYNTLINAYCKAGKMGEAFRMMDEMTRKGLKIDTCTLNTILHSLCGEKKLDEAYTL 480
PDCVTYNTLINAYCK GKMGEAFR MDEMTRKGLKIDTCTLNTILHSLCGEKKLDEAY L
Sbjct: 421 PDCVTYNTLINAYCKVGKMGEAFRAMDEMTRKGLKIDTCTLNTILHSLCGEKKLDEAYKL 480
Query: 481 LCSASKRGYILDEVSYGTLIMGYFKDEKANGALNLWDEMKERQIIPSIVTYNSIIGGLCQ 540
LCSASKRGYILDEVSYGTLIMGYFKDEKAN AL+LWDEMKERQIIPSIVTYNS+IGGLCQ
Sbjct: 481 LCSASKRGYILDEVSYGTLIMGYFKDEKANRALSLWDEMKERQIIPSIVTYNSVIGGLCQ 540
Query: 541 SGKTDQAIDKLNELLESGLVPDETTYNIIIHGYCWEGNVEKAFQFHNKMIENLFKPDVFT 600
S KTDQAIDKLNELLESGLVPDETTYNIIIHGYCWEGNVEKAFQFHNKMIENLFKPDVFT
Sbjct: 541 SRKTDQAIDKLNELLESGLVPDETTYNIIIHGYCWEGNVEKAFQFHNKMIENLFKPDVFT 600
Query: 601 CNILLRGLCREGMLEKALKLFNTWVSKGKDIDVVTYNTLISSLCKEGKFENAYDLLTEME 660
CNILLRGLCREGMLEKALKLFNTWVSKGKDIDVVTYNTLISSLCK GKF+NAY+LLTEME
Sbjct: 601 CNILLRGLCREGMLEKALKLFNTWVSKGKDIDVVTYNTLISSLCKAGKFDNAYELLTEME 660
Query: 661 EKKLGPDQYTYNAILGALTDAGRIKEAEEFMLKMVESGILHDQNLKLDKGQNVPTSGISE 720
EKKLGPDQYTYNAILGALTDAGRIKEAEEFMLKMVESGILHD++LKLDKG NVPTS ISE
Sbjct: 661 EKKLGPDQYTYNAILGALTDAGRIKEAEEFMLKMVESGILHDRSLKLDKGHNVPTSEISE 720
Query: 721 HFDSKSMDYSDQIKELCNQHKYKDAMHLFDEVTKKGVVLNKYTYLSLMEGLIKRRKSTSK 780
H DSKSMDYSDQI ELCNQ KYKDAMHLF EVTK+GVVLNKYTYL+LMEGLIKRRK TSK
Sbjct: 721 HSDSKSMDYSDQINELCNQQKYKDAMHLFHEVTKQGVVLNKYTYLNLMEGLIKRRKGTSK 780
Query: 781 ASRS 785
ASRS
Sbjct: 781 ASRS 784
BLAST of Lcy13g008170 vs. ExPASy TrEMBL
Match:
A0A6J1FWH3 (pentatricopeptide repeat-containing protein At2g16880 OS=Cucurbita moschata OX=3662 GN=LOC111447545 PE=4 SV=1)
HSP 1 Score: 1454.1 bits (3763), Expect = 0.0e+00
Identity = 723/784 (92.22%), Postives = 748/784 (95.41%), Query Frame = 0
Query: 1 METPPISNQRQTQQENQAQELIQTITRILTSTKAPLSALAPYAAHLSPSLISSIFSSKAL 60
METP ISNQR + ELIQTIT ILTSTKAPL+ALAPYAAHLSPSL+SSI SSKAL
Sbjct: 1 METPSISNQRPS-------ELIQTITTILTSTKAPLTALAPYAAHLSPSLVSSILSSKAL 60
Query: 61 SSHPSVLLSLFKWAQKNVPSFSSPPNNSLSSLLTLLPSLFSHNKFSDAKSLLVSFIATDR 120
SSHP++LLSLFKWAQK+VPSFSSPPNNSLSSL T+LPSLFSHNKFSDAKSLLVSFIA DR
Sbjct: 61 SSHPTILLSLFKWAQKHVPSFSSPPNNSLSSLFTILPSLFSHNKFSDAKSLLVSFIANDR 120
Query: 121 QHELHRLILHPTRGLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNT 180
QHELH+LILHPTR LPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNT
Sbjct: 121 QHELHKLILHPTRDLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNT 180
Query: 181 LLNSLVRYPSLNSILLSREVFKDFVKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKMG 240
LLNSLVRYPSLNSILLSREVFKD VKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKMG
Sbjct: 181 LLNSLVRYPSLNSILLSREVFKDSVKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKMG 240
Query: 241 EFGCVPDNVSYNTILDALCKKGQLHEARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK 300
EFGCVPDNVSYNTILDALCKKGQLHEARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK
Sbjct: 241 EFGCVPDNVSYNTILDALCKKGQLHEARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK 300
Query: 301 EATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLI 360
EATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLI
Sbjct: 301 EATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLI 360
Query: 361 DGCFEWRGSFEAYSLIEEMDKKGVKCNAVTYNIMLKWMCKEGNMNEATTTVQKMEENGFS 420
DGCFEWRGS EAY LIEEMDKKG+KCNA+TYNIMLKWMCKEGNMNEAT TVQKMEENGFS
Sbjct: 361 DGCFEWRGSSEAYCLIEEMDKKGLKCNAITYNIMLKWMCKEGNMNEATNTVQKMEENGFS 420
Query: 421 PDCVTYNTLINAYCKAGKMGEAFRMMDEMTRKGLKIDTCTLNTILHSLCGEKKLDEAYTL 480
PDCVTYNTLINAYCK+GKMGEAF+MMDEMTRKGLKIDTCTLNTILHSL GEKKLDEAY L
Sbjct: 421 PDCVTYNTLINAYCKSGKMGEAFKMMDEMTRKGLKIDTCTLNTILHSLSGEKKLDEAYKL 480
Query: 481 LCSASKRGYILDEVSYGTLIMGYFKDEKANGALNLWDEMKERQIIPSIVTYNSIIGGLCQ 540
LCSASKRGYI+DEVSYGTLIMGYFKDEKAN AL+LWDEMKERQI+PSIVTYNS+IGGLCQ
Sbjct: 481 LCSASKRGYIIDEVSYGTLIMGYFKDEKANRALSLWDEMKERQILPSIVTYNSVIGGLCQ 540
Query: 541 SGKTDQAIDKLNELLESGLVPDETTYNIIIHGYCWEGNVEKAFQFHNKMIENLFKPDVFT 600
SGKTDQAIDKLNELLESGLVPDETTYNIII+GYC EGNV+KAFQFHNKM+EN FKPDVFT
Sbjct: 541 SGKTDQAIDKLNELLESGLVPDETTYNIIINGYCSEGNVQKAFQFHNKMVENFFKPDVFT 600
Query: 601 CNILLRGLCREGMLEKALKLFNTWVSKGKDIDVVTYNTLISSLCKEGKFENAYDLLTEME 660
CNILL GLCREGMLEKALKLFNTWVSK KDIDVVTYNTLISSLCKEGKFENAYDLLT+ME
Sbjct: 601 CNILLCGLCREGMLEKALKLFNTWVSKAKDIDVVTYNTLISSLCKEGKFENAYDLLTDME 660
Query: 661 EKKLGPDQYTYNAILGALTDAGRIKEAEEFMLKMVESGILHDQNLKLDKGQNVPTSGISE 720
EKKL PD YTYNAILGALTDAGRI EAE+FMLKMVESG LHDQNLK DKG++V TS + E
Sbjct: 661 EKKLEPDNYTYNAILGALTDAGRINEAEKFMLKMVESGKLHDQNLKFDKGRSVATSELPE 720
Query: 721 HFDSKSMDYSDQIKELCNQHKYKDAMHLFDEVTKKGVVLNKYTYLSLMEGLIKRRKSTSK 780
H DSKSM YSDQI ELCNQHKYKDAMHLFDEVTKKGVVLN+YTYLSLMEGLIKRRKSTSK
Sbjct: 721 HIDSKSMAYSDQINELCNQHKYKDAMHLFDEVTKKGVVLNRYTYLSLMEGLIKRRKSTSK 777
Query: 781 ASRS 785
ASRS
Sbjct: 781 ASRS 777
BLAST of Lcy13g008170 vs. ExPASy TrEMBL
Match:
A0A1S3BD66 (pentatricopeptide repeat-containing protein At2g16880 OS=Cucumis melo OX=3656 GN=LOC103488749 PE=4 SV=1)
HSP 1 Score: 1318.5 bits (3411), Expect = 0.0e+00
Identity = 661/783 (84.42%), Postives = 708/783 (90.42%), Query Frame = 0
Query: 1 METPPISNQRQTQQENQAQELIQTITRILTSTKAPLSALAPYAAHLSPSLISSIFSSKAL 60
M+TP S + TQQENQ Q+LIQTIT IL+STK SALAPYAAHLSPSLISSIF+S+AL
Sbjct: 1 MKTPSTSYKGPTQQENQEQQLIQTITTILSSTKPSFSALAPYAAHLSPSLISSIFASEAL 60
Query: 61 SSHPSVLLSLFKWAQKNVPSFSSPPNNSLSSLLTLLPSLFSHNKFSDAKSLLVSFIATDR 120
SS PSVL+ +FKWAQK+VPSFSSPP NSLSSLLTLLPSLF H F DAKSLL+SFI++DR
Sbjct: 61 SSRPSVLIHVFKWAQKHVPSFSSPPINSLSSLLTLLPSLFRHYMFYDAKSLLISFISSDR 120
Query: 121 QHELHRLILHPTRGLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNT 180
QHELH+LILHPTR LP PSKALMDTSIGAYVQM +PHLA QIF KMKRLNYRPNLLTC T
Sbjct: 121 QHELHKLILHPTRDLPEPSKALMDTSIGAYVQMRQPHLATQIFNKMKRLNYRPNLLTCKT 180
Query: 181 LLNSLVRYPSLNSILLSREVFKDFVKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKMG 240
L+NSLVRYPS +SILL+R+VFKD +KLGVV +TNS NILIYGYCLESK KDALDLVNKM
Sbjct: 181 LMNSLVRYPSSSSILLARQVFKDSIKLGVVPDTNSVNILIYGYCLESKVKDALDLVNKMS 240
Query: 241 EFGCVPDNVSYNTILDALCKKGQLHEARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK 300
EFGCVPD VSYNTILDAL KK LHEARDLLLDM NKGLLPNK TYNILV GYC+LG LK
Sbjct: 241 EFGCVPDTVSYNTILDALFKKRLLHEARDLLLDMTNKGLLPNKRTYNILVWGYCRLGLLK 300
Query: 301 EATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLI 360
EATKVIE+MT NLLP++WTYN+LI+GFCNDGKIDEAFRLRDEMEKMK+LPDVVTYNTLI
Sbjct: 301 EATKVIEIMTHKNLLPNIWTYNILINGFCNDGKIDEAFRLRDEMEKMKVLPDVVTYNTLI 360
Query: 361 DGCFEWRGSFEAYSLIEEMDKKGVKCNAVTYNIMLKWMCKEGNMNEATTTVQKMEENGFS 420
DGC E RGS E YSLIEEMDKKGVKCNAVTYNI+LKWMCK+ NM EATTT+QKMEENG S
Sbjct: 361 DGCSERRGSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKENMTEATTTLQKMEENGLS 420
Query: 421 PDCVTYNTLINAYCKAGKMGEAFRMMDEMTRKGLKIDTCTLNTILHSLCGEKKLDEAYTL 480
PDCVTYNTLI YCKAGKMGEAFRMMDEM KGLKIDT TLNTILHSLC EKKLDEAY L
Sbjct: 421 PDCVTYNTLIAGYCKAGKMGEAFRMMDEMISKGLKIDTWTLNTILHSLCVEKKLDEAYNL 480
Query: 481 LCSASKRGYILDEVSYGTLIMGYFKDEKANGALNLWDEMKERQIIPSIVTYNSIIGGLCQ 540
LCSASKRGYILDEVSYG LIMG+FKDEK + ALNLWDEMKERQIIPS +TYNS+I GLCQ
Sbjct: 481 LCSASKRGYILDEVSYGILIMGHFKDEKGDRALNLWDEMKERQIIPSTITYNSVIRGLCQ 540
Query: 541 SGKTDQAIDKLNELLESGLVPDETTYNIIIHGYCWEGNVEKAFQFHNKMIENLFKPDVFT 600
S KTDQA DKLNE+LE+G+VPDETTYNIIIHGYC EGNVEKAFQFHNKMIENLFKPDV+T
Sbjct: 541 STKTDQATDKLNEMLENGIVPDETTYNIIIHGYCLEGNVEKAFQFHNKMIENLFKPDVYT 600
Query: 601 CNILLRGLCREGMLEKALKLFNTWVSKGKDIDVVTYNTLISSLCKEGKFENAYDLLTEME 660
NILLRGLCREGMLEKALKLFNTWVS GK +DVVTYNT+ISSLCKEGKFENAYDLLTEME
Sbjct: 601 RNILLRGLCREGMLEKALKLFNTWVSDGKGVDVVTYNTIISSLCKEGKFENAYDLLTEME 660
Query: 661 EKKLGPDQYTYNAILGALTDAGRIKEAEEFMLKMVESGILHDQNLKLDKGQNVPTSGISE 720
KKLGPDQYTY I+ ALTDAGRI+EAEEF+LKMVESGI+HDQNLKL KGQNV TS +SE
Sbjct: 661 AKKLGPDQYTYKTIIAALTDAGRIEEAEEFILKMVESGIVHDQNLKLGKGQNVLTSEVSE 720
Query: 721 HFDSKSMDYSDQIKELCNQHKYKDAMHLFDEVTKKGVVLNKYTYLSLMEGLIKRRKSTSK 780
HFDSKS+ YSDQI ELCNQHKYKDAMHLF EVTK+GV LNKYTYLSLMEGLIKRRKSTSK
Sbjct: 721 HFDSKSIAYSDQINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLSLMEGLIKRRKSTSK 780
Query: 781 ASR 784
ASR
Sbjct: 781 ASR 783
BLAST of Lcy13g008170 vs. ExPASy TrEMBL
Match:
A0A5A7SX61 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00370 PE=4 SV=1)
HSP 1 Score: 1177.5 bits (3045), Expect = 0.0e+00
Identity = 612/783 (78.16%), Postives = 653/783 (83.40%), Query Frame = 0
Query: 1 METPPISNQRQTQQENQAQELIQTITRILTSTKAPLSALAPYAAHLSPSLISSIFSSKAL 60
M+TP S + TQQENQ Q+LIQTIT IL+STK SALAPYAAHLSPSLISSIF+S+AL
Sbjct: 1 MKTPSTSYKGPTQQENQEQQLIQTITTILSSTKPSFSALAPYAAHLSPSLISSIFASEAL 60
Query: 61 SSHPSVLLSLFKWAQKNVPSFSSPPNNSLSSLLTLLPSLFSHNKFSDAKSLLVSFIATDR 120
SS PSVL+ +FKWAQK+VPSFSSPP NSLSSLLTLLPSLF H F DAKSLL+SFI++DR
Sbjct: 61 SSRPSVLIHVFKWAQKHVPSFSSPPINSLSSLLTLLPSLFRHYMFYDAKSLLISFISSDR 120
Query: 121 QHELHRLILHPTRGLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNT 180
QHELH+LILHPTR LP PSKALMDTSIGAYVQM +PHLA QIF KMKRLNYRPNLLTC T
Sbjct: 121 QHELHKLILHPTRDLPEPSKALMDTSIGAYVQMRQPHLATQIFNKMKRLNYRPNLLTCKT 180
Query: 181 LLNSLVRYPSLNSILLSREVFKDFVKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKMG 240
L+NSLVRYPS +SILL+R+VFKD +KLGVV +TNS NILIYGYCLESK KDALDLVNKM
Sbjct: 181 LMNSLVRYPSSSSILLARQVFKDSIKLGVVPDTNSVNILIYGYCLESKVKDALDLVNKMS 240
Query: 241 EFGCVPDNVSYNTILDALCKKGQLHEARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK 300
EFGCVPD VSYNTILDAL KK LHEARDLLLDM NKGLLPNK TYNILV GYC+LG LK
Sbjct: 241 EFGCVPDTVSYNTILDALFKKRLLHEARDLLLDMTNKGLLPNKRTYNILVWGYCRLGLLK 300
Query: 301 EATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLI 360
EAT KIDEAFRLRDEMEKMK+LPDVVTYNTLI
Sbjct: 301 EAT-----------------------------KIDEAFRLRDEMEKMKVLPDVVTYNTLI 360
Query: 361 DGCFEWRGSFEAYSLIEEMDKKGVKCNAVTYNIMLKWMCKEGNMNEATTTVQKMEENGFS 420
DGC E RGS E + NM EATTT+QKMEENG S
Sbjct: 361 DGCSERRGSSE-----------------------------KENMTEATTTLQKMEENGLS 420
Query: 421 PDCVTYNTLINAYCKAGKMGEAFRMMDEMTRKGLKIDTCTLNTILHSLCGEKKLDEAYTL 480
PDCVTYNTLI YCKAGKMGEAFRMMDEM KGLKIDT TLNTILHSLC EKKLDEAY L
Sbjct: 421 PDCVTYNTLIAGYCKAGKMGEAFRMMDEMISKGLKIDTWTLNTILHSLCVEKKLDEAYNL 480
Query: 481 LCSASKRGYILDEVSYGTLIMGYFKDEKANGALNLWDEMKERQIIPSIVTYNSIIGGLCQ 540
LCSASKRGYILDEVSYG LIMG+FKDEK + ALNLWDEMKERQIIPS +TYNS+I GLCQ
Sbjct: 481 LCSASKRGYILDEVSYGILIMGHFKDEKGDRALNLWDEMKERQIIPSTITYNSVIRGLCQ 540
Query: 541 SGKTDQAIDKLNELLESGLVPDETTYNIIIHGYCWEGNVEKAFQFHNKMIENLFKPDVFT 600
S KTDQA DKLNE+LE+G+VPDETTYNIIIHGYC EGNVEKAFQFHNKMIENLFKPDV+T
Sbjct: 541 STKTDQATDKLNEMLENGIVPDETTYNIIIHGYCLEGNVEKAFQFHNKMIENLFKPDVYT 600
Query: 601 CNILLRGLCREGMLEKALKLFNTWVSKGKDIDVVTYNTLISSLCKEGKFENAYDLLTEME 660
NILLRGLCREGMLEKALKLFNTWVS GK +DVVTYNT+ISSLCKEGKFENAYDLLTEME
Sbjct: 601 RNILLRGLCREGMLEKALKLFNTWVSDGKGVDVVTYNTIISSLCKEGKFENAYDLLTEME 660
Query: 661 EKKLGPDQYTYNAILGALTDAGRIKEAEEFMLKMVESGILHDQNLKLDKGQNVPTSGISE 720
KKLGPDQYTY I+ ALTDAGRI+EAEEF+LKMVESGI+HDQNLKL KGQNV TS +SE
Sbjct: 661 AKKLGPDQYTYKTIIAALTDAGRIEEAEEFILKMVESGIVHDQNLKLGKGQNVLTSEVSE 720
Query: 721 HFDSKSMDYSDQIKELCNQHKYKDAMHLFDEVTKKGVVLNKYTYLSLMEGLIKRRKSTSK 780
HFDSKS+ YSDQI ELCNQHKYKDAMHLF EVTK+GV LNKYTYLSLMEGLIKRRKSTSK
Sbjct: 721 HFDSKSIAYSDQINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLSLMEGLIKRRKSTSK 725
Query: 781 ASR 784
ASR
Sbjct: 781 ASR 725
BLAST of Lcy13g008170 vs. NCBI nr
Match:
XP_022983777.1 (pentatricopeptide repeat-containing protein At2g16880 [Cucurbita maxima] >XP_022983785.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita maxima] >XP_022983794.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita maxima] >XP_022983803.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita maxima] >XP_022983811.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita maxima])
HSP 1 Score: 1464.1 bits (3789), Expect = 0.0e+00
Identity = 726/784 (92.60%), Postives = 748/784 (95.41%), Query Frame = 0
Query: 1 METPPISNQRQTQQENQAQELIQTITRILTSTKAPLSALAPYAAHLSPSLISSIFSSKAL 60
METP ISNQR ELIQTIT ILTSTKAPL+ALAPYAAHLSPSL+SSI SSKAL
Sbjct: 1 METPSISNQR-------PPELIQTITTILTSTKAPLTALAPYAAHLSPSLVSSILSSKAL 60
Query: 61 SSHPSVLLSLFKWAQKNVPSFSSPPNNSLSSLLTLLPSLFSHNKFSDAKSLLVSFIATDR 120
SSHP++LLSLFKWAQK+VPSFSSPPNNSLSSL T+LPSLFSHNKFSDAKSLLVSFIA DR
Sbjct: 61 SSHPTILLSLFKWAQKHVPSFSSPPNNSLSSLFTILPSLFSHNKFSDAKSLLVSFIADDR 120
Query: 121 QHELHRLILHPTRGLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNT 180
QHELH+LILHPTR LPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNT
Sbjct: 121 QHELHKLILHPTRDLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNT 180
Query: 181 LLNSLVRYPSLNSILLSREVFKDFVKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKMG 240
LLNSLVRYPSLNSILLSREVFKD VKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKMG
Sbjct: 181 LLNSLVRYPSLNSILLSREVFKDSVKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKMG 240
Query: 241 EFGCVPDNVSYNTILDALCKKGQLHEARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK 300
EFGCVPDNVSYNTILDALCKKGQLHEARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK
Sbjct: 241 EFGCVPDNVSYNTILDALCKKGQLHEARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK 300
Query: 301 EATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLI 360
EATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLI
Sbjct: 301 EATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLI 360
Query: 361 DGCFEWRGSFEAYSLIEEMDKKGVKCNAVTYNIMLKWMCKEGNMNEATTTVQKMEENGFS 420
DGCFEWRGS EAY LIEEMDKKG+KCNA+TYNIMLKWMCKEGNMNEAT TVQKMEENGFS
Sbjct: 361 DGCFEWRGSSEAYCLIEEMDKKGLKCNAITYNIMLKWMCKEGNMNEATNTVQKMEENGFS 420
Query: 421 PDCVTYNTLINAYCKAGKMGEAFRMMDEMTRKGLKIDTCTLNTILHSLCGEKKLDEAYTL 480
PDCVTYNTLINAYCK GKMGEAF+MMD+MTRKGLKIDTCTLNTILHSLCGEKKLDEAY L
Sbjct: 421 PDCVTYNTLINAYCKDGKMGEAFKMMDKMTRKGLKIDTCTLNTILHSLCGEKKLDEAYKL 480
Query: 481 LCSASKRGYILDEVSYGTLIMGYFKDEKANGALNLWDEMKERQIIPSIVTYNSIIGGLCQ 540
LCSASKRGYI+DE+SYGTLIMGYFKDEK N AL+LWDEMKERQI+PSIVTYNS+IGGLCQ
Sbjct: 481 LCSASKRGYIIDEISYGTLIMGYFKDEKENRALSLWDEMKERQILPSIVTYNSVIGGLCQ 540
Query: 541 SGKTDQAIDKLNELLESGLVPDETTYNIIIHGYCWEGNVEKAFQFHNKMIENLFKPDVFT 600
SGKTDQAIDKLNELLESGLVPDETTYNIIIHGYCWEGNVEKAFQFHNKM+EN FKPDVFT
Sbjct: 541 SGKTDQAIDKLNELLESGLVPDETTYNIIIHGYCWEGNVEKAFQFHNKMVENFFKPDVFT 600
Query: 601 CNILLRGLCREGMLEKALKLFNTWVSKGKDIDVVTYNTLISSLCKEGKFENAYDLLTEME 660
CNILL GLCREGMLEKALKLFNTWVSKGKDIDVVTYNTLISSLCKEGKFENAYDLLT+ME
Sbjct: 601 CNILLCGLCREGMLEKALKLFNTWVSKGKDIDVVTYNTLISSLCKEGKFENAYDLLTDME 660
Query: 661 EKKLGPDQYTYNAILGALTDAGRIKEAEEFMLKMVESGILHDQNLKLDKGQNVPTSGISE 720
EKKL PD+YTYNAILGALTDA RI EAE+FMLKMVESG LHDQN KLDKGQ+V TS I E
Sbjct: 661 EKKLEPDKYTYNAILGALTDAARINEAEKFMLKMVESGKLHDQNFKLDKGQSVATSEIPE 720
Query: 721 HFDSKSMDYSDQIKELCNQHKYKDAMHLFDEVTKKGVVLNKYTYLSLMEGLIKRRKSTSK 780
H DSKSM YSDQI ELCNQHKYKDAMHLFDEVTKKGVVLN+YTYLSLMEGLIKRRKSTSK
Sbjct: 721 HIDSKSMAYSDQINELCNQHKYKDAMHLFDEVTKKGVVLNRYTYLSLMEGLIKRRKSTSK 777
Query: 781 ASRS 785
ASRS
Sbjct: 781 ASRS 777
BLAST of Lcy13g008170 vs. NCBI nr
Match:
XP_022139038.1 (pentatricopeptide repeat-containing protein At2g16880 [Momordica charantia] >XP_022139039.1 pentatricopeptide repeat-containing protein At2g16880 [Momordica charantia] >XP_022139040.1 pentatricopeptide repeat-containing protein At2g16880 [Momordica charantia] >XP_022139041.1 pentatricopeptide repeat-containing protein At2g16880 [Momordica charantia])
HSP 1 Score: 1458.0 bits (3773), Expect = 0.0e+00
Identity = 725/784 (92.47%), Postives = 750/784 (95.66%), Query Frame = 0
Query: 1 METPPISNQRQTQQENQAQELIQTITRILTSTKAPLSALAPYAAHLSPSLISSIFSSKAL 60
METP NQR QEN+ +ELIQTIT ILTS++APLSAL PYAAHLSPSLI SIFSS+ L
Sbjct: 1 METPTTPNQRLMPQENRPEELIQTITTILTSSRAPLSALGPYAAHLSPSLICSIFSSRVL 60
Query: 61 SSHPSVLLSLFKWAQKNVPSFSSPPNNSLSSLLTLLPSLFSHNKFSDAKSLLVSFIATDR 120
+S PSVLLS FKWAQK+VP+FSSPPNNSL+SLLTLLPSLFSHNKFSDAKSLLVSFIA+DR
Sbjct: 61 NSRPSVLLSFFKWAQKHVPAFSSPPNNSLTSLLTLLPSLFSHNKFSDAKSLLVSFIASDR 120
Query: 121 QHELHRLILHPTRGLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNT 180
QH LHRLILHP+RGLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYR NLLTCNT
Sbjct: 121 QHNLHRLILHPSRGLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRLNLLTCNT 180
Query: 181 LLNSLVRYPSLNSILLSREVFKDFVKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKMG 240
LLNSLVRYPS NSILLSREVFKD +KLGVV NTNSFNILIYGYCLES+FKDALDLVNKMG
Sbjct: 181 LLNSLVRYPSSNSILLSREVFKDSIKLGVVPNTNSFNILIYGYCLESRFKDALDLVNKMG 240
Query: 241 EFGCVPDNVSYNTILDALCKKGQLHEARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK 300
EFGCVPDNVSYNTILDALCKKGQL+EARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK
Sbjct: 241 EFGCVPDNVSYNTILDALCKKGQLYEARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK 300
Query: 301 EATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLI 360
+ATKVIELMTQNNLLPDVWTYNMLISGF NDGKID+AFRLRDEMEKMKMLPDVVTYNTLI
Sbjct: 301 DATKVIELMTQNNLLPDVWTYNMLISGFVNDGKIDDAFRLRDEMEKMKMLPDVVTYNTLI 360
Query: 361 DGCFEWRGSFEAYSLIEEMDKKGVKCNAVTYNIMLKWMCKEGNMNEATTTVQKMEENGFS 420
DGCFEWRGS EA +LIEEMDKKGVKCNAVTYNIMLKWMCKEGNMNEATTTVQKMEENGFS
Sbjct: 361 DGCFEWRGSSEANNLIEEMDKKGVKCNAVTYNIMLKWMCKEGNMNEATTTVQKMEENGFS 420
Query: 421 PDCVTYNTLINAYCKAGKMGEAFRMMDEMTRKGLKIDTCTLNTILHSLCGEKKLDEAYTL 480
PDCVTYNTLINAYCK GKMGEAFR MDEMTRKGLKIDTCTLNTILHSLCGEKKLDEAY L
Sbjct: 421 PDCVTYNTLINAYCKVGKMGEAFRAMDEMTRKGLKIDTCTLNTILHSLCGEKKLDEAYKL 480
Query: 481 LCSASKRGYILDEVSYGTLIMGYFKDEKANGALNLWDEMKERQIIPSIVTYNSIIGGLCQ 540
LCSASKRGYILDEVSYGTLIMGYFKDEKAN AL+LWDEMKERQIIPSIVTYNS+IGGLCQ
Sbjct: 481 LCSASKRGYILDEVSYGTLIMGYFKDEKANRALSLWDEMKERQIIPSIVTYNSVIGGLCQ 540
Query: 541 SGKTDQAIDKLNELLESGLVPDETTYNIIIHGYCWEGNVEKAFQFHNKMIENLFKPDVFT 600
S KTDQAIDKLNELLESGLVPDETTYNIIIHGYCWEGNVEKAFQFHNKMIENLFKPDVFT
Sbjct: 541 SRKTDQAIDKLNELLESGLVPDETTYNIIIHGYCWEGNVEKAFQFHNKMIENLFKPDVFT 600
Query: 601 CNILLRGLCREGMLEKALKLFNTWVSKGKDIDVVTYNTLISSLCKEGKFENAYDLLTEME 660
CNILLRGLCREGMLEKALKLFNTWVSKGKDIDVVTYNTLISSLCK GKF+NAY+LLTEME
Sbjct: 601 CNILLRGLCREGMLEKALKLFNTWVSKGKDIDVVTYNTLISSLCKAGKFDNAYELLTEME 660
Query: 661 EKKLGPDQYTYNAILGALTDAGRIKEAEEFMLKMVESGILHDQNLKLDKGQNVPTSGISE 720
EKKLGPDQYTYNAILGALTDAGRIKEAEEFMLKMVESGILHD++LKLDKG NVPTS ISE
Sbjct: 661 EKKLGPDQYTYNAILGALTDAGRIKEAEEFMLKMVESGILHDRSLKLDKGHNVPTSEISE 720
Query: 721 HFDSKSMDYSDQIKELCNQHKYKDAMHLFDEVTKKGVVLNKYTYLSLMEGLIKRRKSTSK 780
H DSKSMDYSDQI ELCNQ KYKDAMHLF EVTK+GVVLNKYTYL+LMEGLIKRRK TSK
Sbjct: 721 HSDSKSMDYSDQINELCNQQKYKDAMHLFHEVTKQGVVLNKYTYLNLMEGLIKRRKGTSK 780
Query: 781 ASRS 785
ASRS
Sbjct: 781 ASRS 784
BLAST of Lcy13g008170 vs. NCBI nr
Match:
XP_023525433.1 (pentatricopeptide repeat-containing protein At2g16880 [Cucurbita pepo subsp. pepo] >XP_023525440.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita pepo subsp. pepo] >XP_023525450.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita pepo subsp. pepo] >XP_023525458.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1454.9 bits (3765), Expect = 0.0e+00
Identity = 723/784 (92.22%), Postives = 748/784 (95.41%), Query Frame = 0
Query: 1 METPPISNQRQTQQENQAQELIQTITRILTSTKAPLSALAPYAAHLSPSLISSIFSSKAL 60
METP I+NQR + ELIQTIT ILTSTKAPL+ALAPYAAHLSPSL+SSI SSKAL
Sbjct: 1 METPSITNQRPS-------ELIQTITTILTSTKAPLTALAPYAAHLSPSLVSSILSSKAL 60
Query: 61 SSHPSVLLSLFKWAQKNVPSFSSPPNNSLSSLLTLLPSLFSHNKFSDAKSLLVSFIATDR 120
SSHP++LLSLFKWAQK+VPSFSSPPNNSLSSL T+LPSLFSHNKFSDAKSLLVSFIA DR
Sbjct: 61 SSHPTILLSLFKWAQKHVPSFSSPPNNSLSSLFTILPSLFSHNKFSDAKSLLVSFIANDR 120
Query: 121 QHELHRLILHPTRGLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNT 180
QHELH+LILHPTR LPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNT
Sbjct: 121 QHELHKLILHPTRDLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNT 180
Query: 181 LLNSLVRYPSLNSILLSREVFKDFVKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKMG 240
LLNSLVRYPS NSILLSREVFKD VKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKMG
Sbjct: 181 LLNSLVRYPSSNSILLSREVFKDSVKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKMG 240
Query: 241 EFGCVPDNVSYNTILDALCKKGQLHEARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK 300
EFGCVPDNVSYNTILDALCKKGQLHEARDLLL+MKNKGLLPNKNTYNILVSGYCKLGWLK
Sbjct: 241 EFGCVPDNVSYNTILDALCKKGQLHEARDLLLNMKNKGLLPNKNTYNILVSGYCKLGWLK 300
Query: 301 EATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLI 360
EATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLI
Sbjct: 301 EATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLI 360
Query: 361 DGCFEWRGSFEAYSLIEEMDKKGVKCNAVTYNIMLKWMCKEGNMNEATTTVQKMEENGFS 420
DGCFEWRGS EAY LIEEMDKKG+KCNA+TYNIMLKWMCKEGNMNEAT TVQKMEENGFS
Sbjct: 361 DGCFEWRGSSEAYCLIEEMDKKGLKCNAITYNIMLKWMCKEGNMNEATNTVQKMEENGFS 420
Query: 421 PDCVTYNTLINAYCKAGKMGEAFRMMDEMTRKGLKIDTCTLNTILHSLCGEKKLDEAYTL 480
PDCVTYNTLINAYCKAGKMGEAF+MMDEMTRKGLKIDTCTLNTILHSLCGEKKLDEAY L
Sbjct: 421 PDCVTYNTLINAYCKAGKMGEAFKMMDEMTRKGLKIDTCTLNTILHSLCGEKKLDEAYKL 480
Query: 481 LCSASKRGYILDEVSYGTLIMGYFKDEKANGALNLWDEMKERQIIPSIVTYNSIIGGLCQ 540
LCSASKRGYI+DEVSYGTLIMGYFKDEKAN AL+LWDEMKERQI+PSIVTYNS+IGGLCQ
Sbjct: 481 LCSASKRGYIIDEVSYGTLIMGYFKDEKANRALSLWDEMKERQILPSIVTYNSVIGGLCQ 540
Query: 541 SGKTDQAIDKLNELLESGLVPDETTYNIIIHGYCWEGNVEKAFQFHNKMIENLFKPDVFT 600
SGKTDQAIDKLNELLESGLVPDETTYNIII+GYC EGNVEKAFQFHNKM+EN FKPDVFT
Sbjct: 541 SGKTDQAIDKLNELLESGLVPDETTYNIIINGYCSEGNVEKAFQFHNKMVENFFKPDVFT 600
Query: 601 CNILLRGLCREGMLEKALKLFNTWVSKGKDIDVVTYNTLISSLCKEGKFENAYDLLTEME 660
CNILL GLCREGMLEKALKLFNTWVSK KDIDVVTYNTLISSLCKEGKFENAYDLLT+ME
Sbjct: 601 CNILLCGLCREGMLEKALKLFNTWVSKAKDIDVVTYNTLISSLCKEGKFENAYDLLTDME 660
Query: 661 EKKLGPDQYTYNAILGALTDAGRIKEAEEFMLKMVESGILHDQNLKLDKGQNVPTSGISE 720
EKKL PD YTYNAILGALTDAGRI EAE+FMLKMVESG LHDQNLK DKG++V TS + E
Sbjct: 661 EKKLEPDNYTYNAILGALTDAGRINEAEKFMLKMVESGKLHDQNLKFDKGRSVATSELPE 720
Query: 721 HFDSKSMDYSDQIKELCNQHKYKDAMHLFDEVTKKGVVLNKYTYLSLMEGLIKRRKSTSK 780
H DSKSM YSDQI ELCNQHKYKDAMHLFDEVTKKGVVLN+YTYLSLMEGLIKRRKSTSK
Sbjct: 721 HIDSKSMAYSDQINELCNQHKYKDAMHLFDEVTKKGVVLNRYTYLSLMEGLIKRRKSTSK 777
Query: 781 ASRS 785
ASRS
Sbjct: 781 ASRS 777
BLAST of Lcy13g008170 vs. NCBI nr
Match:
XP_022942538.1 (pentatricopeptide repeat-containing protein At2g16880 [Cucurbita moschata] >XP_022942539.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita moschata] >XP_022942540.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita moschata] >XP_022942542.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita moschata] >KAG7030775.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1454.1 bits (3763), Expect = 0.0e+00
Identity = 723/784 (92.22%), Postives = 748/784 (95.41%), Query Frame = 0
Query: 1 METPPISNQRQTQQENQAQELIQTITRILTSTKAPLSALAPYAAHLSPSLISSIFSSKAL 60
METP ISNQR + ELIQTIT ILTSTKAPL+ALAPYAAHLSPSL+SSI SSKAL
Sbjct: 1 METPSISNQRPS-------ELIQTITTILTSTKAPLTALAPYAAHLSPSLVSSILSSKAL 60
Query: 61 SSHPSVLLSLFKWAQKNVPSFSSPPNNSLSSLLTLLPSLFSHNKFSDAKSLLVSFIATDR 120
SSHP++LLSLFKWAQK+VPSFSSPPNNSLSSL T+LPSLFSHNKFSDAKSLLVSFIA DR
Sbjct: 61 SSHPTILLSLFKWAQKHVPSFSSPPNNSLSSLFTILPSLFSHNKFSDAKSLLVSFIANDR 120
Query: 121 QHELHRLILHPTRGLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNT 180
QHELH+LILHPTR LPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNT
Sbjct: 121 QHELHKLILHPTRDLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNT 180
Query: 181 LLNSLVRYPSLNSILLSREVFKDFVKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKMG 240
LLNSLVRYPSLNSILLSREVFKD VKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKMG
Sbjct: 181 LLNSLVRYPSLNSILLSREVFKDSVKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKMG 240
Query: 241 EFGCVPDNVSYNTILDALCKKGQLHEARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK 300
EFGCVPDNVSYNTILDALCKKGQLHEARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK
Sbjct: 241 EFGCVPDNVSYNTILDALCKKGQLHEARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK 300
Query: 301 EATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLI 360
EATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLI
Sbjct: 301 EATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLI 360
Query: 361 DGCFEWRGSFEAYSLIEEMDKKGVKCNAVTYNIMLKWMCKEGNMNEATTTVQKMEENGFS 420
DGCFEWRGS EAY LIEEMDKKG+KCNA+TYNIMLKWMCKEGNMNEAT TVQKMEENGFS
Sbjct: 361 DGCFEWRGSSEAYCLIEEMDKKGLKCNAITYNIMLKWMCKEGNMNEATNTVQKMEENGFS 420
Query: 421 PDCVTYNTLINAYCKAGKMGEAFRMMDEMTRKGLKIDTCTLNTILHSLCGEKKLDEAYTL 480
PDCVTYNTLINAYCK+GKMGEAF+MMDEMTRKGLKIDTCTLNTILHSL GEKKLDEAY L
Sbjct: 421 PDCVTYNTLINAYCKSGKMGEAFKMMDEMTRKGLKIDTCTLNTILHSLSGEKKLDEAYKL 480
Query: 481 LCSASKRGYILDEVSYGTLIMGYFKDEKANGALNLWDEMKERQIIPSIVTYNSIIGGLCQ 540
LCSASKRGYI+DEVSYGTLIMGYFKDEKAN AL+LWDEMKERQI+PSIVTYNS+IGGLCQ
Sbjct: 481 LCSASKRGYIIDEVSYGTLIMGYFKDEKANRALSLWDEMKERQILPSIVTYNSVIGGLCQ 540
Query: 541 SGKTDQAIDKLNELLESGLVPDETTYNIIIHGYCWEGNVEKAFQFHNKMIENLFKPDVFT 600
SGKTDQAIDKLNELLESGLVPDETTYNIII+GYC EGNV+KAFQFHNKM+EN FKPDVFT
Sbjct: 541 SGKTDQAIDKLNELLESGLVPDETTYNIIINGYCSEGNVQKAFQFHNKMVENFFKPDVFT 600
Query: 601 CNILLRGLCREGMLEKALKLFNTWVSKGKDIDVVTYNTLISSLCKEGKFENAYDLLTEME 660
CNILL GLCREGMLEKALKLFNTWVSK KDIDVVTYNTLISSLCKEGKFENAYDLLT+ME
Sbjct: 601 CNILLCGLCREGMLEKALKLFNTWVSKAKDIDVVTYNTLISSLCKEGKFENAYDLLTDME 660
Query: 661 EKKLGPDQYTYNAILGALTDAGRIKEAEEFMLKMVESGILHDQNLKLDKGQNVPTSGISE 720
EKKL PD YTYNAILGALTDAGRI EAE+FMLKMVESG LHDQNLK DKG++V TS + E
Sbjct: 661 EKKLEPDNYTYNAILGALTDAGRINEAEKFMLKMVESGKLHDQNLKFDKGRSVATSELPE 720
Query: 721 HFDSKSMDYSDQIKELCNQHKYKDAMHLFDEVTKKGVVLNKYTYLSLMEGLIKRRKSTSK 780
H DSKSM YSDQI ELCNQHKYKDAMHLFDEVTKKGVVLN+YTYLSLMEGLIKRRKSTSK
Sbjct: 721 HIDSKSMAYSDQINELCNQHKYKDAMHLFDEVTKKGVVLNRYTYLSLMEGLIKRRKSTSK 777
Query: 781 ASRS 785
ASRS
Sbjct: 781 ASRS 777
BLAST of Lcy13g008170 vs. NCBI nr
Match:
KAG6600102.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1414.8 bits (3661), Expect = 0.0e+00
Identity = 700/757 (92.47%), Postives = 721/757 (95.24%), Query Frame = 0
Query: 1 METPPISNQRQTQQENQAQELIQTITRILTSTKAPLSALAPYAAHLSPSLISSIFSSKAL 60
METP ISNQR + ELIQTIT ILTSTKAPL+ALAPYAAHLSPSL+SSI SSKAL
Sbjct: 173 METPSISNQRPS-------ELIQTITTILTSTKAPLTALAPYAAHLSPSLVSSILSSKAL 232
Query: 61 SSHPSVLLSLFKWAQKNVPSFSSPPNNSLSSLLTLLPSLFSHNKFSDAKSLLVSFIATDR 120
SSHP++LLSLFKWAQK+VPSFSSPPNNSLSSL T+LPSLFSHNKFSDAKSLLVSFIA DR
Sbjct: 233 SSHPTILLSLFKWAQKHVPSFSSPPNNSLSSLFTILPSLFSHNKFSDAKSLLVSFIANDR 292
Query: 121 QHELHRLILHPTRGLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNT 180
QHELH LILHPTR LPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNT
Sbjct: 293 QHELHNLILHPTRDLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNT 352
Query: 181 LLNSLVRYPSLNSILLSREVFKDFVKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKMG 240
LLNSLVRYPSLNSILLSREVFKD VKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKMG
Sbjct: 353 LLNSLVRYPSLNSILLSREVFKDTVKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKMG 412
Query: 241 EFGCVPDNVSYNTILDALCKKGQLHEARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK 300
EFGCVPDNVSYNTILDALCKKGQLHEARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK
Sbjct: 413 EFGCVPDNVSYNTILDALCKKGQLHEARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK 472
Query: 301 EATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLI 360
EATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLI
Sbjct: 473 EATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLI 532
Query: 361 DGCFEWRGSFEAYSLIEEMDKKGVKCNAVTYNIMLKWMCKEGNMNEATTTVQKMEENGFS 420
DGCFEWRGS EAY LIEEMDKKG+KCNA+TYNIMLKWMCKEGNMNEAT TVQKMEENGFS
Sbjct: 533 DGCFEWRGSSEAYCLIEEMDKKGLKCNAITYNIMLKWMCKEGNMNEATNTVQKMEENGFS 592
Query: 421 PDCVTYNTLINAYCKAGKMGEAFRMMDEMTRKGLKIDTCTLNTILHSLCGEKKLDEAYTL 480
PDCVTYNTLINAYCKAGKMGEAF MMDEMTR+GLKIDTCTLNTILHSLCGEKKLDEAY L
Sbjct: 593 PDCVTYNTLINAYCKAGKMGEAFEMMDEMTRRGLKIDTCTLNTILHSLCGEKKLDEAYKL 652
Query: 481 LCSASKRGYILDEVSYGTLIMGYFKDEKANGALNLWDEMKERQIIPSIVTYNSIIGGLCQ 540
LCSASKRGYI+DEVSYGTLIMGYFKDEKAN AL+LWDEMKERQI+PSIVTYNS+IGGLC
Sbjct: 653 LCSASKRGYIIDEVSYGTLIMGYFKDEKANRALSLWDEMKERQILPSIVTYNSVIGGLCM 712
Query: 541 SGKTDQAIDKLNELLESGLVPDETTYNIIIHGYCWEGNVEKAFQFHNKMIENLFKPDVFT 600
SGKTDQAIDKLNELLESGLVPDETTYNIII+GYC EGNVEKAFQFHNKM+EN FKPDVFT
Sbjct: 713 SGKTDQAIDKLNELLESGLVPDETTYNIIINGYCSEGNVEKAFQFHNKMVENFFKPDVFT 772
Query: 601 CNILLRGLCREGMLEKALKLFNTWVSKGKDIDVVTYNTLISSLCKEGKFENAYDLLTEME 660
CNILL GLCREGMLEKALKLFNTWVSKGKDIDVVTYNTLISSLCKEGKFENAYDLLT+ME
Sbjct: 773 CNILLCGLCREGMLEKALKLFNTWVSKGKDIDVVTYNTLISSLCKEGKFENAYDLLTDME 832
Query: 661 EKKLGPDQYTYNAILGALTDAGRIKEAEEFMLKMVESGILHDQNLKLDKGQNVPTSGISE 720
EKKLGPD YTYNAILGALTDAGRI EAE+FMLKMVESG LHDQNLK DKG++V TS + E
Sbjct: 833 EKKLGPDNYTYNAILGALTDAGRINEAEKFMLKMVESGKLHDQNLKFDKGRSVATSELPE 892
Query: 721 HFDSKSMDYSDQIKELCNQHKYKDAMHLFDEVTKKGV 758
H DSKSM YSDQI ELCNQHKYKDAMHLFDEVTKKGV
Sbjct: 893 HIDSKSMAYSDQINELCNQHKYKDAMHLFDEVTKKGV 922
BLAST of Lcy13g008170 vs. TAIR 10
Match:
AT2G16880.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 758.8 bits (1958), Expect = 4.2e-219
Identity = 387/730 (53.01%), Postives = 528/730 (72.33%), Query Frame = 0
Query: 20 ELIQTITRILTSTKAP-LSALAPYAAHLSPSLISSIFSSKALSSHPSVLLSLFKWAQKNV 79
+L++T+T ILTS K L L PY ++ L++S+ SS +L+ P L+S F+WAQ ++
Sbjct: 10 QLLKTLTSILTSEKTHFLETLNPYIPQITQPLLTSLLSSPSLAKKPETLVSFFQWAQTSI 69
Query: 80 PSFSSPPNNSLSSLLTLLPSLFSHNKFSDAKSLLVSFIAT-DRQHELHRLILHPTRGL-P 139
P + P++S L++++ SL SH+KF+DAKSLLVS+I T D L +LHP L P
Sbjct: 70 P--EAFPSDSPLPLISVVRSLLSHHKFADAKSLLVSYIRTSDASLSLCNSLLHPNLHLSP 129
Query: 140 RPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNTLLNSLVRYPSLNSILL 199
PSKAL D ++ AY+ GKPH+A QIF+KM RL +PNLLTCNTLL LVRYPS SI
Sbjct: 130 PPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISS 189
Query: 200 SREVFKDFVKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKM-GEFGCVPDNVSYNTIL 259
+REVF D VK+GV LN +FN+L+ GYCLE K +DAL ++ +M EF PDNV+YNTIL
Sbjct: 190 AREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTIL 249
Query: 260 DALCKKGQLHEARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLKEATKVIELMTQNNLL 319
A+ KKG+L + ++LLLDMK GL+PN+ TYN LV GYCKLG LKEA +++ELM Q N+L
Sbjct: 250 KAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVL 309
Query: 320 PDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLIDGCFEWRGSFEAYSL 379
PD+ TYN+LI+G CN G + E L D M+ +K+ PDVVTYNTLIDGCFE S EA L
Sbjct: 310 PDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKL 369
Query: 380 IEEMDKKGVKCNAVTYNIMLKWMCKEGNMNEATTTVQKM-EENGFSPDCVTYNTLINAYC 439
+E+M+ GVK N VT+NI LKW+CKE T V+++ + +GFSPD VTY+TLI AY
Sbjct: 370 MEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYL 429
Query: 440 KAGKMGEAFRMMDEMTRKGLKIDTCTLNTILHSLCGEKKLDEAYTLLCSASKRGYILDEV 499
K G + A MM EM +KG+K++T TLNTIL +LC E+KLDEA+ LL SA KRG+I+DEV
Sbjct: 430 KVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEV 489
Query: 500 SYGTLIMGYFKDEKANGALNLWDEMKERQIIPSIVTYNSIIGGLCQSGKTDQAIDKLNEL 559
+YGTLIMG+F++EK AL +WDEMK+ +I P++ T+NS+IGGLC GKT+ A++K +EL
Sbjct: 490 TYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDEL 549
Query: 560 LESGLVPDETTYNIIIHGYCWEGNVEKAFQFHNKMIENLFKPDVFTCNILLRGLCREGML 619
ESGL+PD++T+N II GYC EG VEKAF+F+N+ I++ FKPD +TCNILL GLC+EGM
Sbjct: 550 AESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMT 609
Query: 620 EKALKLFNTWVSKGKDIDVVTYNTLISSLCKEGKFENAYDLLTEMEEKKLGPDQYTYNAI 679
EKAL FNT + + +++D VTYNT+IS+ CK+ K + AYDLL+EMEEK L PD++TYN+
Sbjct: 610 EKALNFFNTLIEE-REVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSF 669
Query: 680 LGALTDAGRIKEAEEFMLKMVESGILHDQNLKLDKGQNVPTSGISEHFDSKSMDYSDQIK 739
+ L + G++ E +E + K ++L+++ +N TS E +++++ YSD I
Sbjct: 670 ISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVID 729
Query: 740 ELCNQHKYKD 745
ELC++ + K+
Sbjct: 730 ELCSRGRLKE 736
BLAST of Lcy13g008170 vs. TAIR 10
Match:
AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 313.9 bits (803), Expect = 3.6e-85
Identity = 207/676 (30.62%), Postives = 325/676 (48.08%), Query Frame = 0
Query: 45 HLSPSLISSIFSSKALSSH--PSVLLSLFKWAQKNVPSFSSPPNNSLSSLLTLLPSLFSH 104
HLS + S+ L S +++L WA N F +L L L
Sbjct: 41 HLSANFTPEAASNLLLKSQNDQALILKFLNWA--NPHQFF-----TLRCKCITLHILTKF 100
Query: 105 NKFSDAKSLLVSFIATDRQHELHRLI---LHPTRGLPRPSKALMDTSIGAYVQMGKPHLA 164
+ A+ L A E L+ L T L + ++ D + +Y ++ A
Sbjct: 101 KLYKTAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKA 160
Query: 165 AQIFKKMKRLNYRPNLLTCNTLLNSLVRYPSLNSILLSREVFKDFVKLGVVLNTNSFNIL 224
I + + P +L+ N +L++ +R S +I + VFK+ ++ V N ++NIL
Sbjct: 161 LSIVHLAQAHGFMPGVLSYNAVLDATIR--SKRNISFAENVFKEMLESQVSPNVFTYNIL 220
Query: 225 IYGYCLESKFKDALDLVNKMGEFGCVPDNVSYNTILDALCKKGQLHEARDLLLDMKNKGL 284
I G+C AL L +KM GC+P+ V+YNT++D CK ++ + LL M KGL
Sbjct: 221 IRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGL 280
Query: 285 LPNKNTYNILVSGYCKLGWLKEATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFR 344
PN +YN++++G C+ G +KE + V+ M + D TYN LI G+C +G +A
Sbjct: 281 EPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALV 340
Query: 345 LRDEMEKMKMLPDVVTYNTLIDGCFEWRGSFEAYSLIEEMDKKGVKCNAVTYNIMLKWMC 404
+ EM + + P V+TY +LI + A +++M +G+ N TY ++
Sbjct: 341 MHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFS 400
Query: 405 KEGNMNEATTTVQKMEENGFSPDCVTYNTLINAYCKAGKMGEAFRMMDEMTRKGLKIDTC 464
++G MNEA +++M +NGFSP VTYN LIN +C GKM +A ++++M KGL D
Sbjct: 401 QKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVV 460
Query: 465 TLNTILHSLCGEKKLDEAYTLLCSASKRGYILDEVSYGTLIMGYFKDEKANGALNLWDEM 524
+ +T+L C R Y +DE AL + EM
Sbjct: 461 SYSTVLSGFC-----------------RSYDVDE------------------ALRVKREM 520
Query: 525 KERQIIPSIVTYNSIIGGLCQSGKTDQAIDKLNELLESGLVPDETTYNIIIHGYCWEGNV 584
E+ I P +TY+S+I G C+ +T +A D E+L GL PDE TY +I+ YC EG++
Sbjct: 521 VEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDL 580
Query: 585 EKAFQFHNKMIENLFKPDVFTCNILLRGLCREGMLEKA----LKLF-----------NTW 644
EKA Q HN+M+E PDV T ++L+ GL ++ +A LKLF +T
Sbjct: 581 EKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTL 640
Query: 645 VSKGKDIDVVTYNTLISSLCKEGKFENAYDLLTEMEEKKLGPDQYTYNAILGALTDAGRI 701
+ +I+ + +LI C +G A + M K PD YN ++ AG I
Sbjct: 641 IENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDI 672
BLAST of Lcy13g008170 vs. TAIR 10
Match:
AT1G63130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 310.5 bits (794), Expect = 4.0e-84
Identity = 167/531 (31.45%), Postives = 292/531 (54.99%), Query Frame = 0
Query: 159 AAQIFKKMKRLNYRPNLLTCNTLLNSLVRYPSLNSILLSREVFKDFVKLGVVLNTNSFNI 218
A +F M + P+++ + LL+++ + +N L + + LG+ N +++I
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAK---MNKFDLVISLGEQMQNLGISHNLYTYSI 124
Query: 219 LIYGYCLESKFKDALDLVNKMGEFGCVPDNVSYNTILDALCKKGQLHEARDLLLDMKNKG 278
LI +C S+ AL ++ KM + G PD V+ N++L+ C ++ +A L+ M G
Sbjct: 125 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 184
Query: 279 LLPNKNTYNILVSGYCKLGWLKEATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAF 338
P+ T+N L+ G + EA +++ M PD+ TY ++++G C G ID A
Sbjct: 185 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 244
Query: 339 RLRDEMEKMKMLPDVVTYNTLIDGCFEWRGSFEAYSLIEEMDKKGVKCNAVTYNIMLKWM 398
L +ME+ K+ P VV YNT+ID ++ +A +L EMD KG++ N VTYN +++ +
Sbjct: 245 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 304
Query: 399 CKEGNMNEATTTVQKMEENGFSPDCVTYNTLINAYCKAGKMGEAFRMMDEMTRKGLKIDT 458
C G ++A+ + M E +P+ VT++ LI+A+ K GK+ EA ++ DEM ++ + D
Sbjct: 305 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 364
Query: 459 CTLNTILHSLCGEKKLDEAYTLLCSASKRGYILDEVSYGTLIMGYFKDEKANGALNLWDE 518
T +++++ C +LDEA + + + V+Y TLI G+ K ++ + + L+ E
Sbjct: 365 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 424
Query: 519 MKERQIIPSIVTYNSIIGGLCQSGKTDQAIDKLNELLESGLVPDETTYNIIIHGYCWEGN 578
M +R ++ + VTY ++I G Q+ + D A +++ G++PD TY+I++ G C G
Sbjct: 425 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK 484
Query: 579 VEKAFQFHNKMIENLFKPDVFTCNILLRGLCREGMLEKALKLFNTWVSKGKDIDVVTYNT 638
VE A + + +PD++T NI++ G+C+ G +E LF + KG +VVTY T
Sbjct: 485 VETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 544
Query: 639 LISSLCKEGKFENAYDLLTEMEEKKLGPDQYTYNAILGA-LTDAGRIKEAE 689
++S C++G E A L EM+E+ PD TYN ++ A L D + AE
Sbjct: 545 MMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAE 592
BLAST of Lcy13g008170 vs. TAIR 10
Match:
AT1G62930.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 309.3 bits (791), Expect = 8.8e-84
Identity = 170/544 (31.25%), Postives = 294/544 (54.04%), Query Frame = 0
Query: 159 AAQIFKKMKRLNYRPNLLTCNTLLNSLVRYPSLNSILLSREVFKDFVKLGVVLNTNSFNI 218
A +F +M + P+++ N LL+++ + + ++ E ++ L + + S+NI
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQN---LRISYDLYSYNI 123
Query: 219 LIYGYCLESKFKDALDLVNKMGEFGCVPDNVSYNTILDALCKKGQLHEARDLLLDMKNKG 278
LI +C S+ AL ++ KM + G PD V+ +++L+ C ++ EA L+ M
Sbjct: 124 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 183
Query: 279 LLPNKNTYNILVSGYCKLGWLKEATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAF 338
PN T+N L+ G EA +I+ M PD++TY +++G C G ID A
Sbjct: 184 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 243
Query: 339 RLRDEMEKMKMLPDVVTYNTLIDGCFEWRGSFEAYSLIEEMDKKGVKCNAVTYNIMLKWM 398
L +MEK K+ DVV Y T+ID ++ +A +L EMD KG++ N VTYN +++ +
Sbjct: 244 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 303
Query: 399 CKEGNMNEATTTVQKMEENGFSPDCVTYNTLINAYCKAGKMGEAFRMMDEMTRKGLKIDT 458
C G ++A+ + M E +P+ VT++ LI+A+ K GK+ EA ++ DEM ++ + D
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363
Query: 459 CTLNTILHSLCGEKKLDEAYTLLCSASKRGYILDEVSYGTLIMGYFKDEKANGALNLWDE 518
T +++++ C +LDEA + + + V+Y TLI G+ K ++ + L+ E
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 423
Query: 519 MKERQIIPSIVTYNSIIGGLCQSGKTDQAIDKLNELLESGLVPDETTYNIIIHGYCWEGN 578
M +R ++ + VTYN++I GL Q+G D A +++ G+ PD TY+I++ G C G
Sbjct: 424 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 483
Query: 579 VEKAFQFHNKMIENLFKPDVFTCNILLRGLCREGMLEKALKLFNTWVSKGKDIDVVTYNT 638
+EKA + ++ +PD++T NI++ G+C+ G +E LF + KG +V+ Y T
Sbjct: 484 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 543
Query: 639 LISSLCKEGKFENAYDLLTEMEEKKLGPDQYTYNAILGALTDAGRIKEAEEFMLKMVESG 698
+IS C++G E A L EM+E P+ TYN ++ A G + E + +M G
Sbjct: 544 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 603
Query: 699 ILHD 703
+ D
Sbjct: 604 FVGD 604
BLAST of Lcy13g008170 vs. TAIR 10
Match:
AT1G62670.1 (rna processing factor 2 )
HSP 1 Score: 308.9 bits (790), Expect = 1.2e-83
Identity = 167/544 (30.70%), Postives = 294/544 (54.04%), Query Frame = 0
Query: 159 AAQIFKKMKRLNYRPNLLTCNTLLNSLVRYPSLNSILLSREVFKDFVKLGVVLNTNSFNI 218
A +F +M + P+++ + LL+++ + + ++ E ++ LG+ N +++I
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQN---LGIPHNHYTYSI 124
Query: 219 LIYGYCLESKFKDALDLVNKMGEFGCVPDNVSYNTILDALCKKGQLHEARDLLLDMKNKG 278
LI +C S+ AL ++ KM + G P+ V+ +++L+ C ++ EA L+ M G
Sbjct: 125 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 184
Query: 279 LLPNKNTYNILVSGYCKLGWLKEATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAF 338
PN T+N L+ G EA +I+ M PD+ TY ++++G C G D AF
Sbjct: 185 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 244
Query: 339 RLRDEMEKMKMLPDVVTYNTLIDGCFEWRGSFEAYSLIEEMDKKGVKCNAVTYNIMLKWM 398
L ++ME+ K+ P V+ YNT+IDG +++ +A +L +EM+ KG++ N VTY+ ++ +
Sbjct: 245 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 304
Query: 399 CKEGNMNEATTTVQKMEENGFSPDCVTYNTLINAYCKAGKMGEAFRMMDEMTRKGLKIDT 458
C G ++A+ + M E +PD T++ LI+A+ K GK+ EA ++ DEM ++ +
Sbjct: 305 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 364
Query: 459 CTLNTILHSLCGEKKLDEAYTLLCSASKRGYILDEVSYGTLIMGYFKDEKANGALNLWDE 518
T +++++ C +LDEA + + D V+Y TLI G+ K ++ + ++ E
Sbjct: 365 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 424
Query: 519 MKERQIIPSIVTYNSIIGGLCQSGKTDQAIDKLNELLESGLVPDETTYNIIIHGYCWEGN 578
M +R ++ + VTYN +I GL Q+G D A + E++ G+ P+ TYN ++ G C G
Sbjct: 425 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 484
Query: 579 VEKAFQFHNKMIENLFKPDVFTCNILLRGLCREGMLEKALKLFNTWVSKGKDIDVVTYNT 638
+EKA + + +P ++T NI++ G+C+ G +E LF KG DVV YNT
Sbjct: 485 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNT 544
Query: 639 LISSLCKEGKFENAYDLLTEMEEKKLGPDQYTYNAILGALTDAGRIKEAEEFMLKMVESG 698
+IS C++G E A L EM+E P+ YN ++ A G + + E + +M G
Sbjct: 545 MISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 604
Query: 699 ILHD 703
D
Sbjct: 605 FAGD 605
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9ZVX5 | 5.9e-218 | 53.01 | Pentatricopeptide repeat-containing protein At2g16880 OS=Arabidopsis thaliana OX... | [more] |
Q9FIX3 | 5.0e-84 | 30.62 | Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... | [more] |
Q9CAN0 | 5.6e-83 | 31.45 | Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidop... | [more] |
Q9LQ14 | 1.2e-82 | 31.25 | Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidop... | [more] |
Q9SXD1 | 1.6e-82 | 30.70 | Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1J3F6 | 0.0e+00 | 92.60 | pentatricopeptide repeat-containing protein At2g16880 OS=Cucurbita maxima OX=366... | [more] |
A0A6J1CB67 | 0.0e+00 | 92.47 | pentatricopeptide repeat-containing protein At2g16880 OS=Momordica charantia OX=... | [more] |
A0A6J1FWH3 | 0.0e+00 | 92.22 | pentatricopeptide repeat-containing protein At2g16880 OS=Cucurbita moschata OX=3... | [more] |
A0A1S3BD66 | 0.0e+00 | 84.42 | pentatricopeptide repeat-containing protein At2g16880 OS=Cucumis melo OX=3656 GN... | [more] |
A0A5A7SX61 | 0.0e+00 | 78.16 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
Match Name | E-value | Identity | Description | |
XP_022983777.1 | 0.0e+00 | 92.60 | pentatricopeptide repeat-containing protein At2g16880 [Cucurbita maxima] >XP_022... | [more] |
XP_022139038.1 | 0.0e+00 | 92.47 | pentatricopeptide repeat-containing protein At2g16880 [Momordica charantia] >XP_... | [more] |
XP_023525433.1 | 0.0e+00 | 92.22 | pentatricopeptide repeat-containing protein At2g16880 [Cucurbita pepo subsp. pep... | [more] |
XP_022942538.1 | 0.0e+00 | 92.22 | pentatricopeptide repeat-containing protein At2g16880 [Cucurbita moschata] >XP_0... | [more] |
KAG6600102.1 | 0.0e+00 | 92.47 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
Match Name | E-value | Identity | Description | |
AT2G16880.1 | 4.2e-219 | 53.01 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G39710.1 | 3.6e-85 | 30.62 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G63130.1 | 4.0e-84 | 31.45 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G62930.1 | 8.8e-84 | 31.25 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G62670.1 | 1.2e-83 | 30.70 | rna processing factor 2 | [more] |