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Lcy13g008070 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTGCTCGCTTTGCTCCGCCTCTCTCCGCCCTAAAATCGCGAACATCATGGACCGAATGACTTCGAATTTGCTTGACGAAGCTCTAGGTCTCGATGATCCGACCAAACCCTCGCCTCTGATCGGCCGTCTGTTGCTCGTCGAGGATTGCGTTGAAACAAGCGGTGCTTTTGTTCTTCACCACCTCCTCAAGCGCGCCTTTTCTTCTCCTCACTCTTCCAATGCCGTCATCTTCGTTGCATTCTCTCAGTCCTTCGCCCACTACGACCGCGTGCTCCGGAAATTGGTAACTTCTCGCTCTCTCGCTGTTTCTGTATGCTTATATGATGTTAATAGTTCAGATTTTTGGCTATCTGTTAGTTCATTTGGCGACGAACGAACTTATTTCAATTGTGGTTTGGGTCTTTTTGTTTTTTTGAACTTGGTTGTCGGTGAGAGAACGATGGTGGAAATTTATTAGTGTTGCTATCAGTGTTGACAACTTAATAAGAACTTACATAAATATGATTTGCACGGACAGTTCTATTGGGTGATTGACGGACATTCCTTTTAGTGCAGTATAGTTTATGAAATTATTGGATGATTAATGATGGGTCTCTCTTCTCATTCATCTGCGATATGATGTGCTAAGATTCTGTCAATTAGTTACATTAATTTAGTGTTCAGAATGAGATGTATTCATTTGTAGAACTATTTTTTAAATAGGGGTGTAACTTAGCTGCTCAAAGGGACAGCGGTAGGTTCTTTTTCTTTGACATGCTTACGCTGGGCTGTTCAGGTGAGAAAACCAGGTATAATATCCTCATTTAAGCTTTTAATTTTTCCCCCTCCCTTTTCTTCAAAAATGTCATTATTTTCTTTATCTGTTGAAGTGGCTTTCTTTCCAATTTGTATAAAAGATGATTAAGTTACAATTAGGAAGGGTTGGTTGCACATCCAGCTATTGATGAAGTAGGTTTTTTCCTCCCCTTTCTACATTTGCAGTGAAGAATATTTTCATAATTCATTAACACCCGAACCCCATACTTCTTCATCACTGAGCTTGGATATCTGGATAACCCTGAAATAAAGATGGCTAGTGTCCTCCTTGATATGATACAAATTTTTCTGTTACCAGATAGTAGTGGAAAGGAAACTGGTGAAGGTGTTCTTGTTGGGCTGTACTGCAAAATTCAGAGAGCTGTTAGTGCCTTAATTCAAGAGAACAAAAAGCATGTCACCATTGTGATAGATGATATAGCTCTTTTGGAGGTTGCTGCCAATGGCTCTTCAAATCATGTCTTGGACTTCCTTCATTATTGCCACACTTTAACATCAGAAATTGTAAGGCTCTTTAAGCTAACCGAATTCTTCTCTTCTTCACATATCCTTGTCATTTTCAATCTGCAGTATTGATACTTTGCTCTTGCCACAGGGTTGTTCCATAATTGCACTTAATCACGAAGATGTGTACATGGACATTGAGAGGCCACTGATTCTACAGATGGAATACCTTGCTGATATTTTGATAAAAGTAGGACCACTAGCCACTGGTATAGCAAAGGACGTTCATGGACAGGTCCCATTTCTTGTTTTCATAACTTTCATGTTTACAAATTTGTTTTATACGCATAATTAGATTTGAATTATTTTCCCCTACATCTTCCCTGGTCGAGAATTGTGCAACTTGAATGTACTTGAACCAAAAAAAAAAAACTTTTCCTGATCTTAATTACCTAAAATTTCCTCCAGATTTCTGGCATTATATGTGAGGGGCTGTTGATGACATTATTGTCTCAATAATGTGATTGTATGGTGTATAGTCCTTATTCCTTAAGATGTCAATAATTTCGTACAAGTTCTATGCTGTAAGCAAGGAAAAGAAATCATAGAAGAATAGTATTTCTTTTGATAAGAGACTTTCTTGACCCCACCTTCATTAATTCTCTCCCTGTAACTGTGCCTTACCGGGCTATTCTGGATGTGACTTTAGTTAATATGTGTTGTTGAGTTTAAAGATACAATACAATGCTAATATGGTTTTAAATCTCAATTACATCATCGTGCTGACAATCATACTTTTTCCTTTTCGTTGTTTGACTTAAATTTATTTAAGTTTGCTGCTTCCAATCATTGTTCGGGTGGTCATAGTCATGTTTCATTTTCTTCTCTGCAGCTGACAGTTTTGAACAAACCAGTTGGAGGCCTGCAAGACAACTTAAGAAACAGAGTGCATAATTTTCACTTTTACATCAAGGAAAATGGTACTGAGTTTTTTTATTCTGGAAGCAGAGCTTGAGGGAAATTTTGGGCAAGAAAAAGTTTGAGGGATATGATAATTATTCCTTTGTACCCTTGTGCCTTTTGTTGCGGTGAAGTCGACTCTTGGTGATGCAATTAGAAGGCGCTCTATCGAGGTTCTCATAGACAGAAAAAGATCGGTTGCAACCGATTTGTTCAGAGTGAAACCACCTAAAACTACTTGCTTGTTTCTTTAGTTAACATTATAACAAAGGGTAAATTTACTTGTTAAAGTCATGTTAAATGAATTTTCTCCCTTTTGTTGTTAATTCGTCTATTTATTTGCTACTTTCATTGCCAGTCAATATTGATAAGAAATACTAGCACTTGATTATTGACAA CTTGCTCGCTTTGCTCCGCCTCTCTCCGCCCTAAAATCGCGAACATCATGGACCGAATGACTTCGAATTTGCTTGACGAAGCTCTAGGTCTCGATGATCCGACCAAACCCTCGCCTCTGATCGGCCGTCTGTTGCTCGTCGAGGATTGCGTTGAAACAAGCGGTGCTTTTGTTCTTCACCACCTCCTCAAGCGCGCCTTTTCTTCTCCTCACTCTTCCAATGCCGTCATCTTCGTTGCATTCTCTCAGTCCTTCGCCCACTACGACCGCGTGCTCCGGAAATTGGGGTGTAACTTAGCTGCTCAAAGGGACAGCGGTAGGTTCTTTTTCTTTGACATGCTTACGCTGGGCTGTTCAGATAGTAGTGGAAAGGAAACTGGTGAAGGTGTTCTTGTTGGGCTGTACTGCAAAATTCAGAGAGCTGTTAGTGCCTTAATTCAAGAGAACAAAAAGCATGTCACCATTGTGATAGATGATATAGCTCTTTTGGAGGTTGCTGCCAATGGCTCTTCAAATCATGTCTTGGACTTCCTTCATTATTGCCACACTTTAACATCAGAAATTGGTTGTTCCATAATTGCACTTAATCACGAAGATGTGTACATGGACATTGAGAGGCCACTGATTCTACAGATGGAATACCTTGCTGATATTTTGATAAAAGTAGGACCACTAGCCACTGGTATAGCAAAGGACGTTCATGGACAGCTGACAGTTTTGAACAAACCAGTTGGAGGCCTGCAAGACAACTTAAGAAACAGAGTGCATAATTTTCACTTTTACATCAAGGAAAATGGTACTGAGTTTTTTTATTCTGGAAGCAGAGCTTGAGGGAAATTTTGGGCAAGAAAAAGTTTGAGGGATATGATAATTATTCCTTTGTACCCTTGTGCCTTTTGTTGCGGTGAAGTCGACTCTTGGTGATGCAATTAGAAGGCGCTCTATCGAGGTTCTCATAGACAGAAAAAGATCGGTTGCAACCGATTTGTTCAGAGTGAAACCACCTAAAACTACTTGCTTGTTTCTTTAGTTAACATTATAACAAAGGGTAAATTTACTTGTTAAAGTCATGTTAAATGAATTTTCTCCCTTTTGTTGTTAATTCGTCTATTTATTTGCTACTTTCATTGCCAGTCAATATTGATAAGAAATACTAGCACTTGATTATTGACAA ATGGACCGAATGACTTCGAATTTGCTTGACGAAGCTCTAGGTCTCGATGATCCGACCAAACCCTCGCCTCTGATCGGCCGTCTGTTGCTCGTCGAGGATTGCGTTGAAACAAGCGGTGCTTTTGTTCTTCACCACCTCCTCAAGCGCGCCTTTTCTTCTCCTCACTCTTCCAATGCCGTCATCTTCGTTGCATTCTCTCAGTCCTTCGCCCACTACGACCGCGTGCTCCGGAAATTGGGGTGTAACTTAGCTGCTCAAAGGGACAGCGGTAGGTTCTTTTTCTTTGACATGCTTACGCTGGGCTGTTCAGATAGTAGTGGAAAGGAAACTGGTGAAGGTGTTCTTGTTGGGCTGTACTGCAAAATTCAGAGAGCTGTTAGTGCCTTAATTCAAGAGAACAAAAAGCATGTCACCATTGTGATAGATGATATAGCTCTTTTGGAGGTTGCTGCCAATGGCTCTTCAAATCATGTCTTGGACTTCCTTCATTATTGCCACACTTTAACATCAGAAATTGGTTGTTCCATAATTGCACTTAATCACGAAGATGTGTACATGGACATTGAGAGGCCACTGATTCTACAGATGGAATACCTTGCTGATATTTTGATAAAAGTAGGACCACTAGCCACTGGTATAGCAAAGGACGTTCATGGACAGCTGACAGTTTTGAACAAACCAGTTGGAGGCCTGCAAGACAACTTAAGAAACAGAGTGCATAATTTTCACTTTTACATCAAGGAAAATGGTACTGAGTTTTTTTATTCTGGAAGCAGAGCTTGA MDRMTSNLLDEALGLDDPTKPSPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFVAFSQSFAHYDRVLRKLGCNLAAQRDSGRFFFFDMLTLGCSDSSGKETGEGVLVGLYCKIQRAVSALIQENKKHVTIVIDDIALLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIALNHEDVYMDIERPLILQMEYLADILIKVGPLATGIAKDVHGQLTVLNKPVGGLQDNLRNRVHNFHFYIKENGTEFFYSGSRA Homology
BLAST of Lcy13g008070 vs. ExPASy Swiss-Prot
Match: Q8L9Y2 (Elongator complex protein 6 OS=Arabidopsis thaliana OX=3702 GN=ELP6 PE=1 SV=1) HSP 1 Score: 279.3 bits (713), Expect = 4.6e-74 Identity = 143/264 (54.17%), Postives = 192/264 (72.73%), Query Frame = 0
BLAST of Lcy13g008070 vs. ExPASy Swiss-Prot
Match: Q0IHA2 (Elongator complex protein 6 OS=Xenopus laevis OX=8355 GN=elp6 PE=2 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 6.1e-18 Identity = 76/267 (28.46%), Postives = 135/267 (50.56%), Query Frame = 0
BLAST of Lcy13g008070 vs. ExPASy Swiss-Prot
Match: Q8BK75 (Elongator complex protein 6 OS=Mus musculus OX=10090 GN=Elp6 PE=2 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 8.8e-17 Identity = 75/249 (30.12%), Postives = 124/249 (49.80%), Query Frame = 0
BLAST of Lcy13g008070 vs. ExPASy Swiss-Prot
Match: Q9GPT6 (Elongator complex protein 6 OS=Dictyostelium discoideum OX=44689 GN=elp6 PE=3 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 2.0e-16 Identity = 82/326 (25.15%), Postives = 130/326 (39.88%), Query Frame = 0
BLAST of Lcy13g008070 vs. ExPASy Swiss-Prot
Match: B2RYG8 (Elongator complex protein 6 OS=Rattus norvegicus OX=10116 GN=Elp6 PE=2 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 2.5e-16 Identity = 77/252 (30.56%), Postives = 126/252 (50.00%), Query Frame = 0
BLAST of Lcy13g008070 vs. ExPASy TrEMBL
Match: A0A6J1GYT6 (elongator complex protein 6 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458756 PE=3 SV=1) HSP 1 Score: 483.8 bits (1244), Expect = 4.5e-133 Identity = 239/260 (91.92%), Postives = 249/260 (95.77%), Query Frame = 0
BLAST of Lcy13g008070 vs. ExPASy TrEMBL
Match: A0A6J1CBS2 (elongator complex protein 6 OS=Momordica charantia OX=3673 GN=LOC111010200 PE=3 SV=1) HSP 1 Score: 482.3 bits (1240), Expect = 1.3e-132 Identity = 237/259 (91.51%), Postives = 245/259 (94.59%), Query Frame = 0
BLAST of Lcy13g008070 vs. ExPASy TrEMBL
Match: A0A6J1JAX8 (elongator complex protein 6 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485133 PE=3 SV=1) HSP 1 Score: 481.9 bits (1239), Expect = 1.7e-132 Identity = 238/260 (91.54%), Postives = 249/260 (95.77%), Query Frame = 0
BLAST of Lcy13g008070 vs. ExPASy TrEMBL
Match: A0A0A0KLF1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G176020 PE=3 SV=1) HSP 1 Score: 476.1 bits (1224), Expect = 9.4e-131 Identity = 237/260 (91.15%), Postives = 245/260 (94.23%), Query Frame = 0
BLAST of Lcy13g008070 vs. ExPASy TrEMBL
Match: A0A5A7SX52 (Elongator complex protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00250 PE=3 SV=1) HSP 1 Score: 470.3 bits (1209), Expect = 5.2e-129 Identity = 232/260 (89.23%), Postives = 244/260 (93.85%), Query Frame = 0
BLAST of Lcy13g008070 vs. NCBI nr
Match: XP_038893352.1 (elongator complex protein 6 [Benincasa hispida]) HSP 1 Score: 494.2 bits (1271), Expect = 6.9e-136 Identity = 241/260 (92.69%), Postives = 252/260 (96.92%), Query Frame = 0
BLAST of Lcy13g008070 vs. NCBI nr
Match: XP_023533346.1 (elongator complex protein 6 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 489.2 bits (1258), Expect = 2.2e-134 Identity = 241/260 (92.69%), Postives = 250/260 (96.15%), Query Frame = 0
BLAST of Lcy13g008070 vs. NCBI nr
Match: XP_022957322.1 (elongator complex protein 6 isoform X1 [Cucurbita moschata]) HSP 1 Score: 483.8 bits (1244), Expect = 9.3e-133 Identity = 239/260 (91.92%), Postives = 249/260 (95.77%), Query Frame = 0
BLAST of Lcy13g008070 vs. NCBI nr
Match: XP_022139240.1 (elongator complex protein 6 [Momordica charantia]) HSP 1 Score: 482.3 bits (1240), Expect = 2.7e-132 Identity = 237/259 (91.51%), Postives = 245/259 (94.59%), Query Frame = 0
BLAST of Lcy13g008070 vs. NCBI nr
Match: XP_022987647.1 (elongator complex protein 6 isoform X2 [Cucurbita maxima]) HSP 1 Score: 481.9 bits (1239), Expect = 3.5e-132 Identity = 238/260 (91.54%), Postives = 249/260 (95.77%), Query Frame = 0
BLAST of Lcy13g008070 vs. TAIR 10
Match: AT4G10090.1 (elongator protein 6 ) HSP 1 Score: 279.3 bits (713), Expect = 3.2e-75 Identity = 143/264 (54.17%), Postives = 192/264 (72.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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