![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Lcy13g007880 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGAGAATTCACGTCAAGCCCGGTGACGATTCCGGCGAGAACGAGTTTCTTTATGATAGTCCGAGCAACTTATTGATCGAAGAAATTGCTTCAGAAGTTGTTGGAATTTCCAATCTCCAATCTAAAATCCATCGGCTTGTTTCAGAACTCGAACCCCGTCTACTTCCTCTCTATGGCGATCCCAAAGGTTTAATCATTTCTCTTTTACTCGATTCTGTTTCTTTCTCTCTTCTGATCATCTTACGCTCGTCGACGATGGCTGTGATGTGAAGCTGCGCCTCTTTTGAGAGCTTTATCAGAAGCAAAGTCCTATGCTTCGAAGGTCTCTCTCTATTCCCTTTTTTCTTGTTTGGATGATAGGAAAATGGTTGAGAAATCTGTTATTTAGTAAACCCTAGACTGTGGAGCATAGTAGATGTCATTTGTGATTCTAAGTTGTTGTTTCTTGTTGTTGGGCCTTGTGATTTGATTTTTAGATTTTCCTCATTAGAAATCAGAACTGTTTTAGCTTTGTGAGTAGAAAATTGTTTTCAGAAAAGGGTATGCGTACTATTAGTCTATTCTTCTGCACCTACTCATTAATTGATTTGATGTTTAGATTTTCCCTTATTTGGGATCAGAACTCTTAAGTTATTTGCAGAAGAAGGAATGCTGTACTGTAAATAGTCTATTCTTTTGCATCTTCTCGCTAATTGATTTGGCTTTTCCCTGATTTGAAATAAGAACTGTTTTTGCTTTGAGAGTATATATATGCATATTTTCCCGGAAAGGGAATGCAGTCTATTCTTATGAATCTTCTCGTTAATTGATTTGAGGTTTAGATTTTCCCTTATTTGAAATCAGAGTTGTTTTTGCTTTGAAAGTAGATTTTGTTTTCAGAAAAGGGAATGCTGTACTAGTCTATTCTTTTGCATCTTCTCATTAATTGATCTGATGTTTAGATTTCCCTTACTTGAAAACAGAACTGTTTAGCTTTGAGAGTAGAAATTTATTTTTCAGAAAAGAGAATTCTATACTATTTTGCATCTTCACATTAATTGATATAATGTTTAGATTTCCCCTTTATTTGAAAACAGAACTTGTTTAGCTTTGAGAGTAGAAATTTATTTTTCAGAAAAGGAAATTCTATACTGATAGTCTTTTCTTCTTTTGTATCTTCACATTAATTGATATAATGTTTAGATTTCCCCTTGTTTGAAAACAGAACTTGTTTAGCTTCGAGAGTAGAAATTTATTTTTCAGAAAAGGTAATGCTGTACTATCAATCTATTCTTTTGCTTCTTCTCATTAATTTATTTGATGTTTAGATTTTCCCTTATTTGGAATCAGAACTGTTTTAGCTTTGAGAGTAGAAATGTATTTTTCAGGAAAGGGAATGCTGTATTACTTATTAGTCTACTCTTTTGCATCTTCTCATTAATTGATTTCAATTTTCTCACTACAGGACATGGTTATCCACAATAGGCCTTTATCATATCTTGTGTTGAGAGACCATTTTGAGACTATCGAAAGGGAATTGCTTGCGAAGTTTGATTTATTGGGTTTCTCTGATTCCACTCAGTATCAACAACTTCTATCTGGTATTTTAGTTTTTCTCCCTTTCTCTTTTGTTTTTTGTTTTTCCTCAGTTCTTAATGAACACTAATATTACCATTGCTCTAAAGGTGTAAATAACCATACTTCTGCATACCCTCATGGTTCAGAATGACATTTTTCTCTTTCATTTAATGTTTTAATTTTTATATTATTCGAGTTACTGAACCTTAATCAATATCCCTTGTCAAGTTTGTTTTGGATTTGAACTGACAAATGTTATCTCAACTGAAAAAATGTGTACTCAATCCAATATGTTTCTTTTTTCGATCCTTTTTGTCCCATTGTTAATTAGGTCCTTTTAGCACAAGATTGCAATTCACTCAAAACTTTGAGCCCATAGTATAATGGTGTTTACTGCTGCTTGTTTTTTGGTTCATGCACACTTGAAGTAAAAACTTTTGTGCAATGTCAACATGAAAATATCTGGTTCACACAAATTCCCCAGAGGAACAATATTAAGTTTCAAGGAATATTATGTCAAAAGAAGTTTCTAGGGAAAGCTCTCTCTTGAAACTATCTTTTTGAATGCTTTTGATAGAACCCAAGTTAATTACATTGAAATATAAAAACAAAATTAGAATATAAGTCTTAAGTATCTCTCTTGAGATGCCACTCAAGTCTAAAGTCACTAAACAATTGCCTACCTCCATTCTTTCCCCTCCCTCTATTTATAACAATTCCCCACTAACACCCTGCTTAGCTAAATACTAATATTAATACCTCATAATATTCCTAGTTCTATCCTAGCATTCCCATCAGCTATTTGATAAGGTTATACATAGGGATAAAGAGCCATTCCATATCATTTTCAATAATCTTTTTGAACTGTTGAAAAAATAAATTGCTTTGTTTTAGTCAATCTTATAATTCTTGATGAAGGTGATTAGAAACGAGATTGTCTATTATCTCACTGTTCAGATGTGGGGCTTCTTGATGAGGGTACGACTCAACTAAAACTGGCAGGAAAAGAGCTTATGAGGGAGAAACAACTTTGTGATTATATTGGAAGAAATGAGAAAACTAAGGTATTTTGTCATTAGACTGTTCTATCATTTGTTTTCTTCATATAGACGACTAATCGCTCCCATTTTCTATCAGATCGTTCTCAAACTGCAACCGACGATCTTGCCCCTGAGTTGAATACTGGTTCGTCGGCGATGTCGAGTACTAACAAGTGCAGTCTGCTTGAAGACATTATGTAA ATGGTGAGAATTCACGTCAAGCCCGGTGACGATTCCGGCGAGAACGAGTTTCTTTATGATAGTCCGAGCAACTTATTGATCGAAGAAATTGCTTCAGAAGTTGTTGGAATTTCCAATCTCCAATCTAAAATCCATCGGCTTGTTTCAGAACTCGAACCCCGTCTACTTCCTCTCTATGGCGATCCCAAAGCTGCGCCTCTTTTGAGAGCTTTATCAGAAGCAAAGTCCTATGCTTCGAAGGACATGGTTATCCACAATAGGCCTTTATCATATCTTGTGTTGAGAGACCATTTTGAGACTATCGAAAGGGAATTGCTTGCGAAGTTTGATTTATTGGGTTTCTCTGATTCCACTCAGTATCAACAACTTCTATCTGATGTGGGGCTTCTTGATGAGGGTACGACTCAACTAAAACTGGCAGGAAAAGAGCTTATGAGGGAGAAACAACTTTGTGATTATATTGGAAGAAATGAGAAAACTAAGACGACTAATCGCTCCCATTTTCTATCAGATCGTTCTCAAACTGCAACCGACGATCTTGCCCCTGAGTTGAATACTGGTTCGTCGGCGATGTCGAGTACTAACAAGTGCAGTCTGCTTGAAGACATTATGTAA ATGGTGAGAATTCACGTCAAGCCCGGTGACGATTCCGGCGAGAACGAGTTTCTTTATGATAGTCCGAGCAACTTATTGATCGAAGAAATTGCTTCAGAAGTTGTTGGAATTTCCAATCTCCAATCTAAAATCCATCGGCTTGTTTCAGAACTCGAACCCCGTCTACTTCCTCTCTATGGCGATCCCAAAGCTGCGCCTCTTTTGAGAGCTTTATCAGAAGCAAAGTCCTATGCTTCGAAGGACATGGTTATCCACAATAGGCCTTTATCATATCTTGTGTTGAGAGACCATTTTGAGACTATCGAAAGGGAATTGCTTGCGAAGTTTGATTTATTGGGTTTCTCTGATTCCACTCAGTATCAACAACTTCTATCTGATGTGGGGCTTCTTGATGAGGGTACGACTCAACTAAAACTGGCAGGAAAAGAGCTTATGAGGGAGAAACAACTTTGTGATTATATTGGAAGAAATGAGAAAACTAAGACGACTAATCGCTCCCATTTTCTATCAGATCGTTCTCAAACTGCAACCGACGATCTTGCCCCTGAGTTGAATACTGGTTCGTCGGCGATGTCGAGTACTAACAAGTGCAGTCTGCTTGAAGACATTATGTAA MVRIHVKPGDDSGENEFLYDSPSNLLIEEIASEVVGISNLQSKIHRLVSELEPRLLPLYGDPKAAPLLRALSEAKSYASKDMVIHNRPLSYLVLRDHFETIERELLAKFDLLGFSDSTQYQQLLSDVGLLDEGTTQLKLAGKELMREKQLCDYIGRNEKTKTTNRSHFLSDRSQTATDDLAPELNTGSSAMSSTNKCSLLEDIM Homology
BLAST of Lcy13g007880 vs. ExPASy Swiss-Prot
Match: A0A1L8H579 (Cilia- and flagella-associated protein 298-B OS=Xenopus laevis OX=8355 GN=cfap298-b PE=3 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 2.6e-08 Identity = 50/201 (24.88%), Postives = 91/201 (45.27%), Query Frame = 0
BLAST of Lcy13g007880 vs. ExPASy Swiss-Prot
Match: A0A1L8HCK2 (Cilia- and flagella-associated protein 298-A OS=Xenopus laevis OX=8355 GN=cfap298-a PE=2 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 5.8e-08 Identity = 51/218 (23.39%), Postives = 94/218 (43.12%), Query Frame = 0
BLAST of Lcy13g007880 vs. ExPASy Swiss-Prot
Match: Q8BL95 (Cilia- and flagella-associated protein 298 OS=Mus musculus OX=10090 GN=Cfap298 PE=1 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 9.9e-08 Identity = 53/218 (24.31%), Postives = 91/218 (41.74%), Query Frame = 0
BLAST of Lcy13g007880 vs. ExPASy Swiss-Prot
Match: P57076 (Cilia- and flagella-associated protein 298 OS=Homo sapiens OX=9606 GN=CFAP298 PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 2.2e-07 Identity = 53/218 (24.31%), Postives = 89/218 (40.83%), Query Frame = 0
BLAST of Lcy13g007880 vs. ExPASy Swiss-Prot
Match: Q5U3Z0 (Cilia- and flagella-associated protein 298 OS=Rattus norvegicus OX=10116 GN=Cfap298 PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 2.2e-07 Identity = 52/218 (23.85%), Postives = 91/218 (41.74%), Query Frame = 0
BLAST of Lcy13g007880 vs. ExPASy TrEMBL
Match: A0A6J1GZ65 (UPF0769 protein C21orf59 homolog B-like OS=Cucurbita moschata OX=3662 GN=LOC111458205 PE=3 SV=1) HSP 1 Score: 273.1 bits (697), Expect = 9.5e-70 Identity = 139/161 (86.34%), Postives = 145/161 (90.06%), Query Frame = 0
BLAST of Lcy13g007880 vs. ExPASy TrEMBL
Match: A0A6J1JQP0 (UPF0769 protein C21orf59 homolog B-like OS=Cucurbita maxima OX=3661 GN=LOC111488970 PE=3 SV=1) HSP 1 Score: 269.2 bits (687), Expect = 1.4e-68 Identity = 139/161 (86.34%), Postives = 145/161 (90.06%), Query Frame = 0
BLAST of Lcy13g007880 vs. ExPASy TrEMBL
Match: A0A1S3CF44 (UPF0769 protein C21orf59 homolog OS=Cucumis melo OX=3656 GN=LOC103500174 PE=3 SV=1) HSP 1 Score: 255.0 bits (650), Expect = 2.7e-64 Identity = 129/160 (80.62%), Postives = 141/160 (88.12%), Query Frame = 0
BLAST of Lcy13g007880 vs. ExPASy TrEMBL
Match: A0A0A0KS44 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G177690 PE=3 SV=1) HSP 1 Score: 253.8 bits (647), Expect = 6.0e-64 Identity = 130/161 (80.75%), Postives = 141/161 (87.58%), Query Frame = 0
BLAST of Lcy13g007880 vs. ExPASy TrEMBL
Match: A0A6P8CRP2 (cilia- and flagella-associated protein 298-B-like OS=Punica granatum OX=22663 GN=LOC116197861 PE=3 SV=1) HSP 1 Score: 191.4 bits (485), Expect = 3.6e-45 Identity = 97/165 (58.79%), Postives = 122/165 (73.94%), Query Frame = 0
BLAST of Lcy13g007880 vs. NCBI nr
Match: KAG6601023.1 (Cilia- and flagella-associated protein 298-B, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 276.6 bits (706), Expect = 1.8e-70 Identity = 142/161 (88.20%), Postives = 146/161 (90.68%), Query Frame = 0
BLAST of Lcy13g007880 vs. NCBI nr
Match: XP_023524979.1 (UPF0769 protein C21orf59 homolog B-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 275.8 bits (704), Expect = 3.0e-70 Identity = 142/161 (88.20%), Postives = 146/161 (90.68%), Query Frame = 0
BLAST of Lcy13g007880 vs. NCBI nr
Match: KAG7031827.1 (hypothetical protein SDJN02_05868, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 275.0 bits (702), Expect = 5.2e-70 Identity = 142/161 (88.20%), Postives = 146/161 (90.68%), Query Frame = 0
BLAST of Lcy13g007880 vs. NCBI nr
Match: XP_022956484.1 (UPF0769 protein C21orf59 homolog B-like [Cucurbita moschata]) HSP 1 Score: 273.1 bits (697), Expect = 2.0e-69 Identity = 139/161 (86.34%), Postives = 145/161 (90.06%), Query Frame = 0
BLAST of Lcy13g007880 vs. NCBI nr
Match: XP_022992712.1 (UPF0769 protein C21orf59 homolog B-like [Cucurbita maxima]) HSP 1 Score: 269.2 bits (687), Expect = 2.8e-68 Identity = 139/161 (86.34%), Postives = 145/161 (90.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|