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Lcy13g007640 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAACGCGCGAAATTCCTCCGAAGGTCAGAATTTCACGCCGTTCTCCGTTCTGCAGAATCAAGATCAAGAAGCAGAAGAAGGCGCGAAGACTTGAAGCGCTAGGGTTAGCAGGAAGTGCGAAATTTCTACAAGTTTCGAATTCGATTAGGGTTTGGCAACGTATCAGACTTCCAAGAATTCACCCTCTGTTCTCCACGGGGCTTCAAGATCATCCAAAAGTCCTTTCCAGGTTCGTTTATTCATCAATTTGCACGTCTGGTTCCCCAAGAATTATGTATTACGCGATGTGTATATTTCGAGTTTGGTTTATAGATACTGAGATGTACTCGTAGAAGAGAGGTGCTGGAGTGAATTCGTATTCGGGAGTTAGGTTAAATTGTTTGTTTTATTACTCGTTGGAGATTCAAACTCTTTCTGATCTTGTATTCGAGCTATGCGTACTCCGAATGGAGCGAATGTTTGGTGTTTGGGGTTTAGTTTTGATGTAATTCAATACTTGAACGTAATACTTGGAGCTGCATATATTTGTATTGTATTGATTGATTTCGAAGCATGGCAGTCAGTTTAAGTATGCAAAAGAGCTTGGTGCGAAGTATGGCAAAAGAACAGGAGTTTTGAATCTATTGTGCACGGACTACTTCTGACCAGATTTTGTTAAACATAGGAGCTATTCCATTTCCAAATAGATATTACGAATTTATGATAAGGAATATTTCTATCTCATCGATAGTTAAAGATCACTATTACTTTCACATTGGGAGGTTTTTGTCGATAACAAAAGCATGTGCTTGCAACTTCTCTGATGTCTCAGTTTTGTTATATCTGAGAATATTACAATATATGTGGATGAGGGGTCTAGACCCCACGACCTCTTAAAAGAAGTACTGTTGTTTTAACTTTTGGGCCATGCTCCAAGTTAGAACTTTTGTTACATTTAGTGTTAGTATGACATGGCTTTTATAGCAAATGCGGTCAATGCTCATTTCCAGGAACATTAGGTGGAAGAAATTAAAAAATCTTGGAAGAGAAGGATAGGAGTTTAGTGTATTGGGATCTCATTAGATTCCCAGTGGCTAGCATCTGTTTGGTGTGTTTGATCCAAGGAATTTATGTTTATAGCATGTCCTTTATTCCTGCCAATTGGGGTGCAGGTGCTTTTTTTTGTAAACTTTTTGGCTTCTTGGGAGATTACCCTTTTTTTCCAGCTTTTGTTAACAGAAGTGTTTCTTATAAAGAAAACATTTTCATTTTGGATTTCACAATGCACTAGAAAAAAATACAACTAATTTGTTCTCAGGAAGACTGAATTTTTATTTGTAATTATTTTATTTTGGGATGACGATGTATTTGGTCACATTGTCACAGGAGGAAGGATGGATTTGCAGCCAGGCTCGGGGGGCTCTGTTTCTTCTGCAGCCATTGATTCCTCGAACATAGGGTTTCAGGTTTGCTCTCTCTTTCACTCACTATTACATATATGAAGTCCTAAATCATGCTTAGATTATATTCCCCCATTTTATGCCTCTTCATTCTCTCTATTTATGTTATGGCTTCCAATATTTGAGCTTCATTTTTTATACTGACTTCCCTTTGTTTTCTTTTGTTGTCCTTTTGAAGCTTTTAAAGAAGCATGGTTGGAGGGAAGGAACAGGCCTTGGAGTTTCTGAGCAGGTTCGTTTCACTAATAGTTTTCATGCTTTATCATATACCCTAAATACAAGTAGTCATAGTTCAATAATTTTAAAATTAGTTACCTGCAAGAACTTGTAATGAAAATTGCTTATTGCTAGTGTACCGGTCAAATTTTAATAAAATGATGAGTGTAAGAGTGGTGTCCTCAGGATTAGTTTTCTAGTTCACTTAATAATCACGGATACAATTCCCCAATTTTATTTAAAGAAATCAAATCAATGGGTGAAATCAAAGACTAAATTAATGCAATTGAAAAATAGATGTTAAGAAAATATAAGTGGAGAAAGGTCCTAAGGAGTTGATTCCACCAATTAGACATACAATTTAATCAATTAAACTACAAGGACTGAACATGCAATCATTTCATAAGTCTTTTTTGGACAAGAAACAATTTTATTGATACAAAATATAGATAAGGAGATACTCCCAAGGGGAAGATTTACAAAAGGCCTCTTGAATTAGAAAGGAGGGAAGTAAAGCTATAGTGATGGAAAAGGAGAGAGCATTTACACCAAGACACAACCATATTGACTATAGCATAAAAAATTCTCTTAAATAGAGCATTCTGTATCTTGAAAGATTCTTCTATTTCGTTCTCCGTTTCTCGCCATAAAATCCAGCAAAAGGCTCCAATAAAGTTCTCCCACAAGGTCTTCTTTTCCTTTTTGACGGGTATCGTCCTAGAGTGTGGTTGAGAAGGGCTGTCTGCCATCCAAAGGAAGGTAAGACAATATTCGAGGAGCTCACAGCAAGTGCACAAGAGAGCATCAGATGGCTTTGAGTTTCTGAATTTTACTTGCAAATAGCACACATTTGTGTAGAAAGAACCATGTAAGGCATCCTTTTCTGTAATTTGTCATGCGTATTTGATGGCTTTGAGGGAGAGTTCCCAGAGGAAGAATTTTATCTTCATGTTAGTAGCCTTTCCAAATCAATTCAAATAGCTGTGTTGAAGTTCTTCACTTGTGGGGGAGAGATCACAAATGAAGGAGCTAGTAGTTAAGTGTCCATTAGTTTCCAACTTCCAAATTCCTTTTCAATCTCAGCGGAAAGAACCACCGAAGATAGACAATGTAGAAGGGAGGCAAATTCCTCAATTTGGCATCTCTTTGGTTTCTTCTCAGCCTGGGACTTCAAATCCCCACCTCCAGCATCCAAAAGTCATGCACCACTGTTTTCTTTACCTGGGGAGAGATTATAAACAAGGGGGGATCTAAGAAGGGACTCTGCACAACGTCTCAACACTATCCACTCGGCCATTGCCTCAACACCGGCTCCTTGTTCTGGTCCAATTTACTTGAATTTCTCGGTGTATTCCATGGGGAAGCTCAAACCTGTTAGTTTCTTAGAAAAAAAAATGTGTACATTACTAAAATCTGTCGGTTAAATTTCGTTATATATATATAACATATACACACGCGCACACACACACTTACGGGTTTTAAAATAATTAAATCTGAAAAGCTACTAGCAGAAAAATTTGATCCGCATGTGGGAATTCCATGAACCTCCTCCTAGGAAGCACGGACACGCCAAAATGGGGGGAGGATCTGTGTCGGACACGCGTCGGACACGGATTCGTTCGGACACGCTCCGGACACGTGTCCGACACGCAATTTTGCGTGTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTCGGACACGCCAGGACACGGCTGGATACGCCACGGACACGCTCTGAGTCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCACAAAAACCTCAACATGCTGCCGCCGGAAGTTGCCTCCAATATCTCCCTTCACCCACTGGTTTTTCTTCTTTTATCTTTTAAAACCTAAAAAGTTAACCTAGATAAAAGGCCCAGCCCAATAACCCACTGGTTCATCTAAGTTTTCTTCTTTTTTATCTTTTAAAACCTAAAAAGTTAACCTAGATAAAAGGCCCAGCCCAATAAAAAACTAAAACTGTTTTTAAATTAAAAAAAAAAATGAAAGATTATTAAACTACTCTCAACAAAGTTTTATATATATACTATTTTTTTAAAAAAACTAATCTATATATATACTAAATTTTTTTAAAAATATATATATATATATATATATATATATATATATATATATATATATATAAAAACAACGTATCTTCAACGTGTCCGTATCTTAGTTTTTTAGAATTTGACGTATCGCCGTGTCCTGTCGTGTCCGTGTCCCGTGTCCGTGTCTGTGCTTCTTAGACCTCCTCCATTTCTCAATATTGGATAATAGGGTGGGGATTGAAAACTTAAATTTTCTGGAGAGTTTGCAAGGGGAGAGCAGCGTCTGCTCGCTCTCCTGATAGATTCAGTTTTTGTGGTGATCGTTCAATGCCCTAGTGTAGTGTCTGGATTCCTACCATCTTCTAGTTGGCTTGTCTTATGCAAGAGCAGGGAAGAAGCAGTAGATTATCGCTGGCTTTGGTGTCTTGTCACTCAGAACTTTCATTTAGTGTCTATCTTTTTGGATTTTGCTTGCTTAAAAGAAGTTAAGGAGTTTTTACACGTAGCTTTTGTGGCCACCCCTTCAAAAAGACGGGTAAAATTCAGAGCTAAATGCAATTAGGGCAATATTGTGGGAATTATGACTTGAAAGAATATAAAAACTTTCCTAGAGAGAGTAGCATTATATGGATGTCATATTGGAGATTAGCGTCCTTGTTTCTTCCTCTTGGAGTACACTCCACTTCATAAAGAATTTACCAAGTATAGTATAGTCTTTTTTTCTACAGCCAAGTTGAGAGGAACCTTGTTACTTCCTAGATTTATTATCTGCATTCCCTCGTTTTTATCATCCTAACAATGAATTTCTGTTTCATTTATTTATTTATTTTTTAATGTGTTCTTGTTTCCTCTTATGATGTAACTAGTTGTAATGTCCTCTTGTTTTCTTGCTATCCTCCAATGTTTACACTTGGAAGTTAATGTTTGAACTCTCATGTAAGCAGGGTAGGTTGGAACCCGTACAGGCATCTGTAAAGAATAATAAACGAGGCTTGGGAGCAGATAAAGCGAAGAAGAAGCTTAAAGAAACTAACGATATTGCAGCCTCTGATAGGAAAAATAACCAGGTAAAACTTCTGTATATGAAATTCTCTGAAGTCCTTAACCACTATCATCAGTTTGCTAGGTGTACTTTAGATGTGAAACTTGAAAGGATCTGGAAACTATGGGAGCTTATTAAAACACTTTCCAATTAGAATTAATGTCAAAAGGAGTATAATTACGAAAAGAATGAACACCAGGAAGAAGAACAACATTGCCATTTAGCCATCTTAATAGTTCGTCCAACTTTGGATGACTTACAATTAAATACTTTGTAATTTCCTGCTAACCAAATTCTCTAAGCTAAGCCTTTACTGCATTTTTAGGTACTGTTTTCGCCTTCTCTAAATCATGACCACATAACAGCTATAGAATATTGTCTTTTGCTAAAGCATTTGAAAGTCCAAGAGAGTTGAAAATTGACAAATTGTTGGCCTCGTATCATGCTTAACCTATCTTGGCAACAGAAGCTTAATATCAAGCAGAATTGAGCAACTAAGCCAAGGCAACGAGTTGAAATTTTGCTCCATAAACTGGCCTAGTGTGATAATTCAAATATTTTGACACAATCATCATTTCAAAAGTTTCTACATGATTCGTTCACCGTGCACTCACCAAACAATTGCAAGGGGAAAAAAAAAGGAAGTATAGCTAACAAGTAGTACTAATATCCTTTTGATCTACAGGAACGATCTCTTTCGAAGAAAGCAAAGGCGATGTCGAAAAAGATGAGGAAGATGCAAGAGGAAGAAAGGCTATATCAAGAGAAGGAATTTGAGCGGGCGTTTTTCAGGGAATTCTGGCCGGACAATGTTTGATACGACATGAACTAGCACTTTCCATATCATCATGTAAGCAAATTCAGAATGTTTCTCAAAAGCCTTCTTTTAATTATGGCTTTAAAGCAGTTAGCATTCGCCAAGTAGTCTGTAAATATGATTACAATTTACACCAAACAGAGCTGTGCAGTTTTGTGTATTGTTTGTTATATGTATGCCTTCTAATTTCCTTGAGCCTCAAGAGAATGTTTAATGATTATTGAATTTGATTTAA GAACGCGCGAAATTCCTCCGAAGGTCAGAATTTCACGCCGTTCTCCGTTCTGCAGAATCAAGATCAAGAAGCAGAAGAAGGCGCGAAGACTTGAAGCGCTAGGGTTAGCAGGAAGTGCGAAATTTCTACAAGTTTCGAATTCGATTAGGGTTTGGCAACGTATCAGACTTCCAAGAATTCACCCTCTGTTCTCCACGGGGCTTCAAGATCATCCAAAAGTCCTTTCCAGGAGGAAGGATGGATTTGCAGCCAGGCTCGGGGGGCTCTGTTTCTTCTGCAGCCATTGATTCCTCGAACATAGGGTTTCAGCTTTTAAAGAAGCATGGTTGGAGGGAAGGAACAGGCCTTGGAGTTTCTGAGCAGGGTAGGTTGGAACCCGTACAGGCATCTGTAAAGAATAATAAACGAGGCTTGGGAGCAGATAAAGCGAAGAAGAAGCTTAAAGAAACTAACGATATTGCAGCCTCTGATAGGAAAAATAACCAGGAACGATCTCTTTCGAAGAAAGCAAAGGCGATGTCGAAAAAGATGAGGAAGATGCAAGAGGAAGAAAGGCTATATCAAGAGAAGGAATTTGAGCGGGCGTTTTTCAGGGAATTCTGGCCGGACAATGTTTGATACGACATGAACTAGCACTTTCCATATCATCATGTAAGCAAATTCAGAATGTTTCTCAAAAGCCTTCTTTTAATTATGGCTTTAAAGCAGTTAGCATTCGCCAAGTAGTCTGTAAATATGATTACAATTTACACCAAACAGAGCTGTGCAGTTTTGTGTATTGTTTGTTATATGTATGCCTTCTAATTTCCTTGAGCCTCAAGAGAATGTTTAATGATTATTGAATTTGATTTAA ATGGATTTGCAGCCAGGCTCGGGGGGCTCTGTTTCTTCTGCAGCCATTGATTCCTCGAACATAGGGTTTCAGCTTTTAAAGAAGCATGGTTGGAGGGAAGGAACAGGCCTTGGAGTTTCTGAGCAGGGTAGGTTGGAACCCGTACAGGCATCTGTAAAGAATAATAAACGAGGCTTGGGAGCAGATAAAGCGAAGAAGAAGCTTAAAGAAACTAACGATATTGCAGCCTCTGATAGGAAAAATAACCAGGAACGATCTCTTTCGAAGAAAGCAAAGGCGATGTCGAAAAAGATGAGGAAGATGCAAGAGGAAGAAAGGCTATATCAAGAGAAGGAATTTGAGCGGGCGTTTTTCAGGGAATTCTGGCCGGACAATGTTTGA MDLQPGSGGSVSSAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKAKKKLKETNDIAASDRKNNQERSLSKKAKAMSKKMRKMQEEERLYQEKEFERAFFREFWPDNV Homology
BLAST of Lcy13g007640 vs. ExPASy Swiss-Prot
Match: Q6C233 (Protein SQS1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=SQS1 PE=3 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 8.9e-07 Identity = 27/47 (57.45%), Postives = 32/47 (68.09%), Query Frame = 0
BLAST of Lcy13g007640 vs. ExPASy Swiss-Prot
Match: A0JMV4 (RNA-binding protein 5-A OS=Xenopus laevis OX=8355 GN=rbm5-a PE=2 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 5.8e-06 Identity = 24/46 (52.17%), Postives = 32/46 (69.57%), Query Frame = 0
BLAST of Lcy13g007640 vs. ExPASy Swiss-Prot
Match: Q6DDU9 (RNA-binding protein 5-B OS=Xenopus laevis OX=8355 GN=rbm5-b PE=2 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 5.8e-06 Identity = 24/46 (52.17%), Postives = 32/46 (69.57%), Query Frame = 0
BLAST of Lcy13g007640 vs. ExPASy Swiss-Prot
Match: A4IGK4 (RNA-binding protein 5 OS=Xenopus tropicalis OX=8364 GN=rbm5 PE=2 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 5.8e-06 Identity = 24/46 (52.17%), Postives = 32/46 (69.57%), Query Frame = 0
BLAST of Lcy13g007640 vs. ExPASy Swiss-Prot
Match: Q8CH09 (SURP and G-patch domain-containing protein 2 OS=Mus musculus OX=10090 GN=Sugp2 PE=1 SV=2) HSP 1 Score: 49.3 bits (116), Expect = 3.7e-05 Identity = 26/63 (41.27%), Postives = 38/63 (60.32%), Query Frame = 0
BLAST of Lcy13g007640 vs. ExPASy TrEMBL
Match: A0A1S4DW19 (G patch domain and ankyrin repeat-containing protein 1 homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488788 PE=4 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 2.3e-50 Identity = 109/126 (86.51%), Postives = 116/126 (92.06%), Query Frame = 0
BLAST of Lcy13g007640 vs. ExPASy TrEMBL
Match: A0A1S3BEH2 (G patch domain and ankyrin repeat-containing protein 1 homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488788 PE=4 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 2.3e-50 Identity = 109/126 (86.51%), Postives = 116/126 (92.06%), Query Frame = 0
BLAST of Lcy13g007640 vs. ExPASy TrEMBL
Match: A0A6J1G054 (G patch domain and ankyrin repeat-containing protein 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111449480 PE=4 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 1.5e-49 Identity = 111/126 (88.10%), Postives = 116/126 (92.06%), Query Frame = 0
BLAST of Lcy13g007640 vs. ExPASy TrEMBL
Match: A0A0A0KPR8 (G-patch domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G579590 PE=4 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 4.4e-49 Identity = 106/126 (84.13%), Postives = 116/126 (92.06%), Query Frame = 0
BLAST of Lcy13g007640 vs. ExPASy TrEMBL
Match: A0A6J1HTU1 (G patch domain and ankyrin repeat-containing protein 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111466528 PE=4 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 1.7e-48 Identity = 109/126 (86.51%), Postives = 115/126 (91.27%), Query Frame = 0
BLAST of Lcy13g007640 vs. NCBI nr
Match: XP_008445906.1 (PREDICTED: G patch domain and ankyrin repeat-containing protein 1 homolog isoform X2 [Cucumis melo]) HSP 1 Score: 208.0 bits (528), Expect = 4.8e-50 Identity = 109/126 (86.51%), Postives = 116/126 (92.06%), Query Frame = 0
BLAST of Lcy13g007640 vs. NCBI nr
Match: XP_016900186.1 (PREDICTED: G patch domain and ankyrin repeat-containing protein 1 homolog isoform X1 [Cucumis melo]) HSP 1 Score: 208.0 bits (528), Expect = 4.8e-50 Identity = 109/126 (86.51%), Postives = 116/126 (92.06%), Query Frame = 0
BLAST of Lcy13g007640 vs. NCBI nr
Match: XP_022945156.1 (G patch domain and ankyrin repeat-containing protein 1 homolog [Cucurbita moschata] >XP_022945157.1 G patch domain and ankyrin repeat-containing protein 1 homolog [Cucurbita moschata]) HSP 1 Score: 205.3 bits (521), Expect = 3.1e-49 Identity = 111/126 (88.10%), Postives = 116/126 (92.06%), Query Frame = 0
BLAST of Lcy13g007640 vs. NCBI nr
Match: XP_038891672.1 (protein PXR1 [Benincasa hispida]) HSP 1 Score: 204.9 bits (520), Expect = 4.0e-49 Identity = 109/126 (86.51%), Postives = 116/126 (92.06%), Query Frame = 0
BLAST of Lcy13g007640 vs. NCBI nr
Match: XP_004147099.1 (G patch domain and ankyrin repeat-containing protein 1 homolog [Cucumis sativus] >KGN51573.1 hypothetical protein Csa_008303 [Cucumis sativus]) HSP 1 Score: 203.8 bits (517), Expect = 9.0e-49 Identity = 106/126 (84.13%), Postives = 116/126 (92.06%), Query Frame = 0
BLAST of Lcy13g007640 vs. TAIR 10
Match: AT5G08535.2 (D111/G-patch domain-containing protein ) HSP 1 Score: 129.4 bits (324), Expect = 2.0e-30 Identity = 74/121 (61.16%), Postives = 92/121 (76.03%), Query Frame = 0
BLAST of Lcy13g007640 vs. TAIR 10
Match: AT5G08535.1 (D111/G-patch domain-containing protein ) HSP 1 Score: 129.4 bits (324), Expect = 2.0e-30 Identity = 74/121 (61.16%), Postives = 92/121 (76.03%), Query Frame = 0
BLAST of Lcy13g007640 vs. TAIR 10
Match: AT3G52350.1 (D111/G-patch domain-containing protein ) HSP 1 Score: 119.4 bits (298), Expect = 2.1e-27 Identity = 71/121 (58.68%), Postives = 86/121 (71.07%), Query Frame = 0
BLAST of Lcy13g007640 vs. TAIR 10
Match: AT3G57910.1 (D111/G-patch domain-containing protein ) HSP 1 Score: 47.8 bits (112), Expect = 7.7e-06 Identity = 28/85 (32.94%), Postives = 45/85 (52.94%), Query Frame = 0
BLAST of Lcy13g007640 vs. TAIR 10
Match: AT3G54230.1 (suppressor of abi3-5 ) HSP 1 Score: 45.8 bits (107), Expect = 2.9e-05 Identity = 32/84 (38.10%), Postives = 45/84 (53.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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