![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Lcy13g007520 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTCTGTAAATATTAAAAATTCTCAATAATATAAAACTCCTCCTTCGGCGAAGACTCCACCGGCGACACAGAGATGATCAGTATTGCAAGCAGTATCGGCGTTATACCATCGCCGGCGCCGGCGTCGGCATCGGCGGCCGCTCGTCCCGCCTGTTGTATGACGGTATTCTCTAGTGCTGATGTAAAATCGTCCTATTCCTCGTTGCCTAGTTCTCTATCGTCGGTTGTTATTAATCCTTTGAACTGCTCGATTAGAAGAGGGAGGAGAATCTTTAGCGAGGTTACAGTCAGATCAGATTCCGGTACTTCGTCTTCAGCCACTGCTGTTTCGGCGGCGACGACGTCATTGTCGGAGGAGGAGACTGGCGAAGCGGCTGCCGCTAGAATTGGAGCGAGAGTTAGGGTTAAGGTGCCTTTGAAGGTGTATCATGTAGCCAAGTTGCCGGAGGCGGATCTTGAGGGGTTGGAAGGAGTTTTGAAGGACTATGTGCGCGTTTGGAAAGGGAAGCGTGTTTCTGCTAATCTTCCGTTTAAGGTGGAGTTTGTTGTTCCGGTTGAAGGCCGTCCGCCGGTCAAATTCGTCGCTCATCTCAAGGAGGAAGAGTTTGAATTCGTTTAATCAGGCTTATTGAATCATCAGACCAACGCAATTACTGTTTTTCCGATCTCAGTATTAATACCAAGCTCCCTTGTGCAGTATTATTATCAACCTTTTAAGGTTTGATCCTCTTCTATTTACATCCATTCACTCTTTGCCTTTGTAATGTAGAGAATTGCTCGAGTGTTTTTCGTTTGAGCTAATTAACCTTCTCCATTATCGATGTGGCTCTGTAAAATAATTGAACCAAGAGGTAAATTTAGTCATCTAATACATGTCGAATCAAATGGTTTCAAAATTGGTTTCTCTTGTATGGATGTTGTTTTCGACCACTTGTCATGTTCTATCTTTTACTTGGAGAGAGGATGGGGATTCGCGGTGGATGACATAGAGCAATGCCCGTGAGTTTGCCTTCCATTTTGAAGATAAATGCCTGCTTGATTCTTGTGACTTGCCGAAGTTTATATTTTGCTTTGAATAAGAAATTTCTGTTTGTCTAAAAGAGCTAACATTTTTTTTATCCATGTATGTTCAAAATAATCCAAGATTTCGCAAATGACCACTTCTCTGTTTGTGACTAATTACTGATGAGGACAAGAATTAGTGGGAGGAATATGAAGCCTAATTTTAGATGATTATTGAGGAGTATAGACTTGAGGTATGTAGTACCCATTTGATGGATAATACTTGGTTATCTGTAAATATGATTTTTGTATGAATAGTCATAGCCAGTTCTTGCATTCTGGTTTTAGTGCATGGTTGATTAGGTAGGCCTGAGTTGGCTCGGTCCAAATTGAAGTGATATTATGAAAAGTTTCTCACAAAACCAATTGAATTGTACATATTACTAGCCTCATAAGGTTGTACTATATGCTTATCTTTTCATTGGACGTGCATTTAAGATAACAAAGTCAATTGGTTCTGATCAACATGGGTTTCTTTTACTTGTGAGGATCTTGTTGACTTGGCTTCAAAGAGGAATGTTAGTGTTTGTTCATTCTTACATCTTTGAAAGCATACCTACATGTCTAGGACTTGCAGGTTAAAAGGCCATTGAGCTCCTCCATACAGCATACTGTTGATTTACTTTGGTGTAGGGTATTAAAATAGTCAATTACGTTCTCTGGTAAGGGCAATATATATATAAGAAACCATGGTTTCATTGAGAAAAAATGAAGGAATACAAGAGGACATACAAAAAACAAGCCTGCCAAAAACACCCGCCTTGACTACAGGAACGGGTTCCGGTCCAAAATAATAAGACCGAGTTGATAATTACAAAAAAGCTTAGAAACAGGTGCCCACAAAGACGAGTTAAATCTAATCGTCTCCCAAAGCTCATTCGTGGATTTCTCCACCCCTCTAATAATTCTACTATTCCTCTCAAGCCATATACCCCACAAAATAGCAAAGAAGCACGCTTGCCAAAGAACTCTCCCTTTGTCTCAAGAACCGAGCTGATAGTTAAGGGCAATATATTGAACACCAAATCTTGTACTGTTCTTGAGTTGCCAGTTTAGAAGAAACTAGCTAAGTTCTAGCTTAGTAGATTAGGTCAATACACGGGACTTCTTCTAAAATCTTGTCTTCGACCCATACATAAAGATGATCCAGGGTAAAAATATGTTGAAGGTCAAGATGGAGGGATGGAAAACTAAGAATGAAAAAGAAGGTTATAAGTCGTTTGAAGTTCATAAACTTAAGATTTCTTTCAACTGTGATTATCTTGCTATTTAGTATTCACTAAAGTAGAAACTTAACATTGAATGCTCATATTATAAAAATTGGAAAACTGGATGGCCTATTTGCTATAATTGAAATGATTACTGTTGAAGTATGGATATAAAATTAAATTTACCAACTCGTAAACTTAAGTTTTTGAGTTGATTGGTGAATTAACATGGTATTAAAGCAAGAGGTCCTGAGTTTAAACTCCTGTAATGTCATTTTCTCCCCAACTAATTTTAAATTTTCACTTGATGAGTTTGTCTACAAATTTCTAAGCCCACAAGTGAAGGGAAGTGTTGAAGTATTAATATAAAATTAAATTTACCATAACCCATAAACTTAAACTTTTGAGTTGGTTGGTTATTTAAAATCTGCATATTGTGCACCTTATCTCATTTAATAACTCTGCACGATTACCTATGCCTCAGCTCAAAAGAGTTTAAGTCCTGAACATGAATGACTCTAGATGAGATGGAAAGGGGAATTCTTCAGATAAGAGGAGGGAGAGTGAGAGGAGTTTAATAATAAATCTCACTAAGAAGTTTTGAGGACCTGACCTTTTCGTTTGGACAAAACCCCTAGTATTGCTGAAACTGGACAATAGTCAATTTGTTTAGTTGTTTGTTTGTTGAAAGCTCTAATCACATATTTTCTTGGTGGAATGCGTGCAGAACTCTCTACATCTTTGCATGCTTTGAACGTGCTGCATTACATTGGAAAAGTGGTTGTTAAATCTCTACCAGCAGGGTACATATCTAATAAATTTTCATGAACATTTGTTATATGAAGTATCAATTGTTCAATTCTAGTGCAGCCTTTGGTCTACGATTGCATCGATATATTCTGTCCGAGTATTTATGTAACTAAAAGAACTAACTAGAAATAAGCATGGATCTGATGACAAACAAGATTTGAGAAAGCTGGGGAGAAAATGTAAAGAACCACAGATAGAACTGTTGAACTCACTTGGTTTCAGCCTAGAATAGAGTATGATGCTTCATTACATGGCATATTGCTGAAATTCTTGTTTCTGTTTCATTTTTCAAGTAATTGATAATCTGAAACTAGAAAAGCTCAAGGTAGACAAAGAGAAGCTATAGAAGTACTTTCCGTAGTGACGTTATTTAACATCGAGGTTAGCGGATGAATTCAATGCTATGTGAATGCCTGCATTGCTGAATTGATACTATTAGGAATAGCAAAGACTTGAAGCATTTG ATTTCTGTAAATATTAAAAATTCTCAATAATATAAAACTCCTCCTTCGGCGAAGACTCCACCGGCGACACAGAGATGATCAGTATTGCAAGCAGTATCGGCGTTATACCATCGCCGGCGCCGGCGTCGGCATCGGCGGCCGCTCGTCCCGCCTGTTGTATGACGGTATTCTCTAGTGCTGATGTAAAATCGTCCTATTCCTCGTTGCCTAGTTCTCTATCGTCGGTTGTTATTAATCCTTTGAACTGCTCGATTAGAAGAGGGAGGAGAATCTTTAGCGAGGTTACAGTCAGATCAGATTCCGGTACTTCGTCTTCAGCCACTGCTGTTTCGGCGGCGACGACGTCATTGTCGGAGGAGGAGACTGGCGAAGCGGCTGCCGCTAGAATTGGAGCGAGAGTTAGGGTTAAGGTGCCTTTGAAGGTGTATCATGTAGCCAAGTTGCCGGAGGCGGATCTTGAGGGGTTGGAAGGAGTTTTGAAGGACTATGTGCGCGTTTGGAAAGGGAAGCGTGTTTCTGCTAATCTTCCGTTTAAGGTGGAGTTTGTTGTTCCGGTTGAAGGCCGTCCGCCGGTCAAATTCGTCGCTCATCTCAAGGAGGAAGAGTTTGAATTCGTTTAATCAGGCTTATTGAATCATCAGACCAACGCAATTACTGTTTTTCCGATCTCAGTATTAATACCAAGCTCCCTTGTGCAGTATTATTATCAACCTTTTAAGGTTTGATCCTCTTCTATTTACATCCATTCACTCTTTGCCTTTGTAATGTAGAGAATTGCTCGAGTGTTTTTCGTTTGAGCTAATTAACCTTCTCCATTATCGATGTGGCTCTGTAAAATAATTGAACCAAGAGGTAAATTTAGTCATCTAATACATGTCGAATCAAATGGTTTCAAAATTGGTTTCTCTTGTATGGATGTTGTTTTCGACCACTTGTCATGTTCTATCTTTTACTTGGAGAGAGGATGGGGATTCGCGGTGGATGACATAGAGCAATGCCCGTGAGTTTGCCTTCCATTTTGAAGATAAATGCCTGCTTGATTCTTGTGACTTGCCGAAGTTTATATTTTGCTTTGAATAAGAAATTTCTGTTTGTCTAAAAGAGCTAACATTTTTTTTATCCATGTATGTTCAAAATAATCCAAGATTTCGCAAATGACCACTTCTCTGTTTGTGACTAATTACTGATGAGGACAAGAATTAGTGGGAGGAATATGAAGCCTAATTTTAGATGATTATTGAGGAGTATAGACTTGAGAACTCTCTACATCTTTGCATGCTTTGAACGTGCTGCATTACATTGGAAAAGTGGTTGTTAAATCTCTACCAGCAGGGTACATATCTAATAAATTTTCATGAACATTTGTTATATGAAGTATCAATTGTTCAATTCTAGTGCAGCCTTTGGTCTACGATTGCATCGATATATTCTGTCCGAGTATTTATGTAACTAAAAGAACTAACTAGAAATAAGCATGGATCTGATGACAAACAAGATTTGAGAAAGCTGGGGAGAAAATGTAAAGAACCACAGATAGAACTGTTGAACTCACTTGGTTTCAGCCTAGAATAGAGTATGATGCTTCATTACATGGCATATTGCTGAAATTCTTGTTTCTGTTTCATTTTTCAAGTAATTGATAATCTGAAACTAGAAAAGCTCAAGGTAGACAAAGAGAAGCTATAGAAGTACTTTCCGTAGTGACGTTATTTAACATCGAGGTTAGCGGATGAATTCAATGCTATGTGAATGCCTGCATTGCTGAATTGATACTATTAGGAATAGCAAAGACTTGAAGCATTTG ATGATCAGTATTGCAAGCAGTATCGGCGTTATACCATCGCCGGCGCCGGCGTCGGCATCGGCGGCCGCTCGTCCCGCCTGTTGTATGACGGTATTCTCTAGTGCTGATGTAAAATCGTCCTATTCCTCGTTGCCTAGTTCTCTATCGTCGGTTGTTATTAATCCTTTGAACTGCTCGATTAGAAGAGGGAGGAGAATCTTTAGCGAGGTTACAGTCAGATCAGATTCCGGTACTTCGTCTTCAGCCACTGCTGTTTCGGCGGCGACGACGTCATTGTCGGAGGAGGAGACTGGCGAAGCGGCTGCCGCTAGAATTGGAGCGAGAGTTAGGGTTAAGGTGCCTTTGAAGGTGTATCATGTAGCCAAGTTGCCGGAGGCGGATCTTGAGGGGTTGGAAGGAGTTTTGAAGGACTATGTGCGCGTTTGGAAAGGGAAGCGTGTTTCTGCTAATCTTCCGTTTAAGGTGGAGTTTGTTGTTCCGGTTGAAGGCCGTCCGCCGGTCAAATTCGTCGCTCATCTCAAGGAGGAAGAGTTTGAATTCGTTTAA MISIASSIGVIPSPAPASASAAARPACCMTVFSSADVKSSYSSLPSSLSSVVINPLNCSIRRGRRIFSEVTVRSDSGTSSSATAVSAATTSLSEEETGEAAAARIGARVRVKVPLKVYHVAKLPEADLEGLEGVLKDYVRVWKGKRVSANLPFKVEFVVPVEGRPPVKFVAHLKEEEFEFV Homology
BLAST of Lcy13g007520 vs. ExPASy Swiss-Prot
Match: P80680 (Ferredoxin-thioredoxin reductase, variable chain OS=Zea mays OX=4577 PE=1 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 7.9e-25 Identity = 59/95 (62.11%), Postives = 75/95 (78.95%), Query Frame = 0
BLAST of Lcy13g007520 vs. ExPASy Swiss-Prot
Match: P38365 (Ferredoxin-thioredoxin reductase, variable chain, chloroplastic OS=Spinacia oleracea OX=3562 GN=FTRV PE=1 SV=2) HSP 1 Score: 91.7 bits (226), Expect = 9.4e-18 Identity = 66/168 (39.29%), Postives = 95/168 (56.55%), Query Frame = 0
BLAST of Lcy13g007520 vs. ExPASy TrEMBL
Match: A0A0A0KV36 (FeThRed_A domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G580660 PE=4 SV=1) HSP 1 Score: 290.0 bits (741), Expect = 6.7e-75 Identity = 159/181 (87.85%), Postives = 172/181 (95.03%), Query Frame = 0
BLAST of Lcy13g007520 vs. ExPASy TrEMBL
Match: A0A5D3D039 (Sphingoid long-chain bases kinase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G003240 PE=4 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 2.8e-73 Identity = 154/181 (85.08%), Postives = 170/181 (93.92%), Query Frame = 0
BLAST of Lcy13g007520 vs. ExPASy TrEMBL
Match: A0A1S3BEI2 (ferredoxin-thioredoxin reductase, variable chain OS=Cucumis melo OX=3656 GN=LOC103488798 PE=4 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 2.8e-73 Identity = 154/181 (85.08%), Postives = 170/181 (93.92%), Query Frame = 0
BLAST of Lcy13g007520 vs. ExPASy TrEMBL
Match: A0A6J1H0Z6 (ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111458936 PE=4 SV=1) HSP 1 Score: 278.9 bits (712), Expect = 1.5e-71 Identity = 154/181 (85.08%), Postives = 164/181 (90.61%), Query Frame = 0
BLAST of Lcy13g007520 vs. ExPASy TrEMBL
Match: A0A6J1KDF2 (ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111493885 PE=4 SV=1) HSP 1 Score: 276.6 bits (706), Expect = 7.6e-71 Identity = 153/181 (84.53%), Postives = 163/181 (90.06%), Query Frame = 0
BLAST of Lcy13g007520 vs. NCBI nr
Match: XP_038893043.1 (ferredoxin-thioredoxin reductase, variable chain-like [Benincasa hispida]) HSP 1 Score: 293.1 bits (749), Expect = 1.6e-75 Identity = 161/181 (88.95%), Postives = 171/181 (94.48%), Query Frame = 0
BLAST of Lcy13g007520 vs. NCBI nr
Match: XP_004147092.1 (ferredoxin-thioredoxin reductase, variable chain [Cucumis sativus] >KGN51581.1 hypothetical protein Csa_008440 [Cucumis sativus]) HSP 1 Score: 290.0 bits (741), Expect = 1.4e-74 Identity = 159/181 (87.85%), Postives = 172/181 (95.03%), Query Frame = 0
BLAST of Lcy13g007520 vs. NCBI nr
Match: KAA0034101.1 (sphingoid long-chain bases kinase 1 [Cucumis melo var. makuwa] >TYK15819.1 sphingoid long-chain bases kinase 1 [Cucumis melo var. makuwa]) HSP 1 Score: 284.6 bits (727), Expect = 5.8e-73 Identity = 154/181 (85.08%), Postives = 170/181 (93.92%), Query Frame = 0
BLAST of Lcy13g007520 vs. NCBI nr
Match: XP_008445916.1 (PREDICTED: ferredoxin-thioredoxin reductase, variable chain [Cucumis melo]) HSP 1 Score: 284.6 bits (727), Expect = 5.8e-73 Identity = 154/181 (85.08%), Postives = 170/181 (93.92%), Query Frame = 0
BLAST of Lcy13g007520 vs. NCBI nr
Match: XP_023549490.1 (ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 281.2 bits (718), Expect = 6.4e-72 Identity = 155/181 (85.64%), Postives = 165/181 (91.16%), Query Frame = 0
BLAST of Lcy13g007520 vs. TAIR 10
Match: AT5G23440.1 (ferredoxin/thioredoxin reductase subunit A (variable subunit) 1 ) HSP 1 Score: 127.9 bits (320), Expect = 8.4e-30 Identity = 84/177 (47.46%), Postives = 116/177 (65.54%), Query Frame = 0
BLAST of Lcy13g007520 vs. TAIR 10
Match: AT5G08410.1 (ferredoxin/thioredoxin reductase subunit A (variable subunit) 2 ) HSP 1 Score: 123.6 bits (309), Expect = 1.6e-28 Identity = 81/172 (47.09%), Postives = 106/172 (61.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|