Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTTTTTTCTTCATGTTCGTCCGTACAGAAGAAACCAAAATGAATATTCTCTAAAACCGTTGTTCGTTAATCGCAATGATCGAAGCTCACCGTCAACGAAGAGATGCATAAATTCATCGCCAGAACTTCGCAGAAACCATAGCCGTTCTTCTTTCTCCGCCATGGACGATCTTCCGCCGTCGTTAGTTATCGAAATCCTGGATCGATTGGCCGATTCCGCCGATTTGGCTCGGTGCCGAGTGGCGTCCAAATCTCTTAATGCTCTCTCTCGCGATGTTAGGTCGGTGAACCTCTTTTGTTCACTGAATCGGTATCTCAAGTCTAGGGCTGTGGAGACGAAGTTGCTAGTGACGCCTTTTAAGGTCATATTGAAGACTCTGATGAGCGAATTTGTGGCTCTCGATTCTGTGTCGATCGGTGTGGAGAAGTCACTTGGACGGATTTCGTATGAGCATGACGATGTTGAGGATTGGTCTGATGATTTGTTCTTGACGGATGCTGGCTTTGCTAGGGAATGGCTGCCGGCGATTGGAAGAGATTTGACGTCCTTGTCTATCGTCGATTTTTGGGTTCAATCTTGCTGGAGACAATCGAAGATTCTGGCGCTAATTACTTCGTGCTGTGAGTTTGGCTATCGAATTGCTTAAAATTATCTATTTCTTCGTGGAACTGTTTTTGTTCATTCGAAGTTCTAAATGTTTCCACGTCTGAGAGACTGGAAAGCATAGGATTTTTTTTTTCCCCAATTGTTGAAAACATTAAAGTTGGTATGCTAGTTAATTATGATCAATAGGAATATACGACGAAGAAACAGGAAAATATAAGGGATGGCGGTGAGGACGTAGAGGGGAATCTCCGAGTCTGAATGTCTTTCACCAAGGAAATATGGGATATTGTTGATGGTTTTAGAATTTGTATGAAAGATTAAATTTGATTCGTCAGCTTGAATTTATGGGTCAAATGGTGTTTTAACATGGGATCAGAAGGTACTCTAGAGCCCATGTGATATCATTTCTTCTCCCACTTTAAATGTCATCTATTAGAGCTTCGACCTAAGGCCAAGCACACAAGTGAGTGTGCTAGGACGAATAAAAGATTAAATTTACTGCATCCCAGTAGCTTAAGTTTTTGAGTTTAGCAGTGATTTATTATGTCAACTTTGCAAGTGTGAGAGTTTTTGAGTTTAGCAGTGATTAATTATGTCAACTTTGCAAGTGTGCTGACTGTCGAGTTACAACATGTGCTCCATTACAAGCCAGTTCTTAAATCTAATGTATGATTTCTTCTGATGTGATAGTAATATAACGAAGGTCGTGTTTAAGTGGTTTGGCCATAGCTGAATGAATAGCATAGGTGCATTCGGCTTCTGACAATGGAACGGAGGACCCTAAAAAGGCAACTTCATGGTGTGTCACCGTGGCACCTTTGAAAGACCAAAATTTTATTAGTAAAATGATATGGTTGAAATAATTTGGATAAGAGGAGAAAAAGAGCAGGCTTTATAGCCCTTAGAAGGATCGTTACAGTCCCCCTTTTTATTTTTTTGACTTCTCATGTATCAGAGTAAGCACTACGAAACAATCGGTGTTGGCATGGATTTAGGAAAAGAGATGTTTAGTTTCAGAATGAAGCCAAGTATTTGGCATTCTAGACTACTTACTATTATTATTGTTTTTCACATAGAGAACTAATTGTTAAAGAAGGATTCTCGTTTCCCATCAATGGAACTTGTCATCAAGATTTTCATCCACGTAGATGTAAGATGCATTAAGTTGCCAGATACCAAGAACAATTTGTTTCCATCCTTTTGAAGTGATTTTGGTTATAATCTTGGTTGTATTTTCCATTCAAAATATTTCCATGACCTTAAATTTTCTTGTCATTGTCCATTATTGACCTTGACTTGTTTCAACTTGTAGGCCATAATCTTCTGGAACTTGAATTGAAGAATGCTTGGTTGTCAGTGGATGGTCTGAATAGAATGAATTCCCTCAAATGTCTGACCCTTGAATTTATAAGATTAGATGATGAAGATCTGAGTGAGGTTAACTATAACTTCCCTCATCTTGAAGTTCTTAATTTGATAGGGGTTGGAGGCCTAAACGAACCAAAAATTCAGCTGGTGCACCTTAAAACCTGTCAATGGACAGTGTCGAATGCTCCAGTTTCTCTGAGCATATGTGCGCCAAGCCTTTCGAAACTTGTACTTAAGTGTGTCAAACCAAAATCACTTATCATTGAAACTCCCATGCTATCTGATTTCCATTTTTGTCTAGAAGATGCAAGTGGGTTACAAGTTACTGAGTTTCCTTGCTTGAGAAAGCTTCATCTTCATTTTCCGTGTCTTTACAGTCTCATCACAACATTTTCATCTGCAAGAACTATAAAGGAACTCACACTGGATACAATGCAACGTGTTGAATCTGTTGAATCTGTTAAGTTTTGCCTCGATACACTGTTTGAAATATTTCCGAATCTTTGCTTTCTTAAATTGGGCCCTGGAGTTTTGTCAGAAGCCGAGACTTGTTATCAAGCTGAAGGTTTGGAAAGACGGATAGGGATGAGAGATTTGAAAACGTTTCATGCTAGCTTAAAAACAAACAAGATTGAGTTAAAACTTCCATTTATCATTTCCATTTTGGAAAAATGTACTGACTCCTTCGATATGGAATTGCTCATCTATCACATTGCCGATTCTGACTTTGCTGGTGGAATCATGTCAAAACGTGCAATTAATCATCCAAGACCAAAATGGAGATGGGAACTGTGGAAGGAAGGATCAACAGAAGCGTGGGCTAAAGGTATTTAAGCTGTCAACTGCAATTGTCATAGTGGAGGAACAGACTTTGCTCCTGAAGGTGCAAAGCTTCAAAAGAGAGGAAATCCAAGTTGGTTTAAGACTTTAAGTTAAGGCTTCCCTCTTTCGACTTTGGCAGACTTACGGTGGTTGTAAGATTACCAAAGAGTTCAGTAGATCCACGGGATGACCCGAAGCAATCCCCCTTGTGATGCTGGGTCTATAATATTTCTTTTCAATCTTTTATGTGCAGATCTTTGCTTGAAGCCTCCTGTTGATTTTTGGTCCTAGGAAACTGTTTGCTGCTGCTGATATATAATACATAGTTGAGCGATCTGAAAAAAGGGCCAGTTGTTTTGCACCTTCGTTTTATACTCTACAAGATAGCCTTAATAATTGCCTTGATCAGTGTGTACATATTTCCAACCAAACAATGACATGTGTTCCCTACACTTACATGTCTGATGCTTCTTATTTGGGTAGAGAATGATTAATATGTAACATTAAACAATTTCATCCATGAATCTGAATGCTATACTCAGTGAGTGTATGGGGTTTACATACTTAAAAGTGTACAGACAGAGACAGTGAAGTCTACCTTCTATCTAGCAGCCAGGCATGCTTGTATACTGAACAATGCAGGTCACTATGAGTCATGAGGATGCAGCAGTAGAGAGAAGTATTGGGGTAATTAAATGGTGACACTGCTCATGATGTCAAATCACTATGCCAGAGTTTCAAGTTGTTGTGAGCACCAGAAAAAGGTTGTAGCCTAGTTTTTATTCTGTCAGTGCACAGGTCTATTGTGATTCTCAGGGTGCAGCAGTAGAGGGAAGAGATGGAGTAATCAGATGGGGTGACACTGCTCATGATGTCAAATTGTCATGCTGGTTCAGAAATTTCAAGTTGCTGGGGAGACCAGCCCTTCCACCAATCCAACCAGACAAAGGGTTTTATTATTTTATTATTTTCTATGTATAATAATTATTATTATTATTAAAAAGTATTATAATTTAAGAGTAGAGATTCGAACCTAGGATTCATATGGGATGAGAATGAGATTTCATCAAGCAACATTAGATTGCCCTTTACTGATTGAGAGTAAATGTTTAATTGTCTAGATAGTCTATGCTATTAGATGATATCTCATCATGTGTCAACTTGAGCAGAGTTCAACTACTTAAGATAAATTTTTTCGACCAAGAGGCCAGAAGTTTAAATTTTCCATCCCCACATGTTGTTGAACTC
mRNA sequence
TGTTTTTTCTTCATGTTCGTCCGTACAGAAGAAACCAAAATGAATATTCTCTAAAACCGTTGTTCGTTAATCGCAATGATCGAAGCTCACCGTCAACGAAGAGATGCATAAATTCATCGCCAGAACTTCGCAGAAACCATAGCCGTTCTTCTTTCTCCGCCATGGACGATCTTCCGCCGTCGTTAGTTATCGAAATCCTGGATCGATTGGCCGATTCCGCCGATTTGGCTCGGTGCCGAGTGGCGTCCAAATCTCTTAATGCTCTCTCTCGCGATGTTAGGTCGGTGAACCTCTTTTGTTCACTGAATCGGTATCTCAAGTCTAGGGCTGTGGAGACGAAGTTGCTAGTGACGCCTTTTAAGGTCATATTGAAGACTCTGATGAGCGAATTTGTGGCTCTCGATTCTGTGTCGATCGGTGTGGAGAAGTCACTTGGACGGATTTCGTATGAGCATGACGATGTTGAGGATTGGTCTGATGATTTGTTCTTGACGGATGCTGGCTTTGCTAGGGAATGGCTGCCGGCGATTGGAAGAGATTTGACGTCCTTGTCTATCGTCGATTTTTGGGTTCAATCTTGCTGGAGACAATCGAAGATTCTGGCGCTAATTACTTCGTGCTGCCATAATCTTCTGGAACTTGAATTGAAGAATGCTTGGTTGTCAGTGGATGGTCTGAATAGAATGAATTCCCTCAAATGTCTGACCCTTGAATTTATAAGATTAGATGATGAAGATCTGAGTGAGGTTAACTATAACTTCCCTCATCTTGAAGTTCTTAATTTGATAGGGGTTGGAGGCCTAAACGAACCAAAAATTCAGCTGGTGCACCTTAAAACCTGTCAATGGACAGTGTCGAATGCTCCAGTTTCTCTGAGCATATGTGCGCCAAGCCTTTCGAAACTTGTACTTAAGTGTGTCAAACCAAAATCACTTATCATTGAAACTCCCATGCTATCTGATTTCCATTTTTGTCTAGAAGATGCAAGTGGGTTACAAGTTACTGAGTTTCCTTGCTTGAGAAAGCTTCATCTTCATTTTCCGTGTCTTTACAGTCTCATCACAACATTTTCATCTGCAAGAACTATAAAGGAACTCACACTGGATACAATGCAACGTGTTGAATCTGTTGAATCTGTTAAGTTTTGCCTCGATACACTGTTTGAAATATTTCCGAATCTTTGCTTTCTTAAATTGGGCCCTGGAGTTTTGTCAGAAGCCGAGACTTGTTATCAAGCTGAAGGTTTGGAAAGACGGATAGGGATGAGAGATTTGAAAACGTTTCATGCTAGCTTAAAAACAAACAAGATTGAGTTAAAACTTCCATTTATCATTTCCATTTTGGAAAAATGTACTGACTCCTTCGATATGGAATTGCTCATCTATCACATTGCCGATTCTGACTTTGCTGGTGGAATCATGTCAAAACGTGCAATTAATCATCCAAGACCAAAATGGAGATGGGAACTGTGGAAGGAAGGATCAACAGAAGCGTGGGCTAAAGGTATTTAAGCTGTCAACTGCAATTGTCATAGTGGAGGAACAGACTTTGCTCCTGAAGGTGCAAAGCTTCAAAAGAGAGGAAATCCAAGTTGGTTTAAGACTTTAAGTTAAGGCTTCCCTCTTTCGACTTTGGCAGACTTACGGTGGTTGTAAGATTACCAAAGAGTTCAGTAGATCCACGGGATGACCCGAAGCAATCCCCCTTGTGATGCTGGGTCTATAATATTTCTTTTCAATCTTTTATGTGCAGATCTTTGCTTGAAGCCTCCTGTTGATTTTTGGTCCTAGGAAACTGTTTGCTGCTGCTGATATATAATACATAGTTGAGCGATCTGAAAAAAGGGCCAGTTGTTTTGCACCTTCGTTTTATACTCTACAAGATAGCCTTAATAATTGCCTTGATCAGTGTGTACATATTTCCAACCAAACAATGACATGTGTTCCCTACACTTACATGTCTGATGCTTCTTATTTGGGTAGAGAATGATTAATATGTAACATTAAACAATTTCATCCATGAATCTGAATGCTATACTCAGTGAGTGTATGGGGTTTACATACTTAAAAGTGTACAGACAGAGACAGTGAAGTCTACCTTCTATCTAGCAGCCAGGCATGCTTGTATACTGAACAATGCAGGTCACTATGAGTCATGAGGATGCAGCAGTAGAGAGAAGTATTGGGGTAATTAAATGGTGACACTGCTCATGATGTCAAATCACTATGCCAGAGTTTCAAGTTGTTGTGAGCACCAGAAAAAGGTTGTAGCCTAGTTTTTATTCTGTCAGTGCACAGGTCTATTGTGATTCTCAGGGTGCAGCAGTAGAGGGAAGAGATGGAGTAATCAGATGGGGTGACACTGCTCATGATGTCAAATTGTCATGCTGGTTCAGAAATTTCAAGTTGCTGGGGAGACCAGCCCTTCCACCAATCCAACCAGACAAAGGGTTTTATTATTTTATTATTTTCTATGTATAATAATTATTATTATTATTAAAAAGTATTATAATTTAAGAGTAGAGATTCGAACCTAGGATTCATATGGGATGAGAATGAGATTTCATCAAGCAACATTAGATTGCCCTTTACTGATTGAGAGTAAATGTTTAATTGTCTAGATAGTCTATGCTATTAGATGATATCTCATCATGTGTCAACTTGAGCAGAGTTCAACTACTTAAGATAAATTTTTTCGACCAAGAGGCCAGAAGTTTAAATTTTCCATCCCCACATGTTGTTGAACTC
Coding sequence (CDS)
ATGGACGATCTTCCGCCGTCGTTAGTTATCGAAATCCTGGATCGATTGGCCGATTCCGCCGATTTGGCTCGGTGCCGAGTGGCGTCCAAATCTCTTAATGCTCTCTCTCGCGATGTTAGGTCGGTGAACCTCTTTTGTTCACTGAATCGGTATCTCAAGTCTAGGGCTGTGGAGACGAAGTTGCTAGTGACGCCTTTTAAGGTCATATTGAAGACTCTGATGAGCGAATTTGTGGCTCTCGATTCTGTGTCGATCGGTGTGGAGAAGTCACTTGGACGGATTTCGTATGAGCATGACGATGTTGAGGATTGGTCTGATGATTTGTTCTTGACGGATGCTGGCTTTGCTAGGGAATGGCTGCCGGCGATTGGAAGAGATTTGACGTCCTTGTCTATCGTCGATTTTTGGGTTCAATCTTGCTGGAGACAATCGAAGATTCTGGCGCTAATTACTTCGTGCTGCCATAATCTTCTGGAACTTGAATTGAAGAATGCTTGGTTGTCAGTGGATGGTCTGAATAGAATGAATTCCCTCAAATGTCTGACCCTTGAATTTATAAGATTAGATGATGAAGATCTGAGTGAGGTTAACTATAACTTCCCTCATCTTGAAGTTCTTAATTTGATAGGGGTTGGAGGCCTAAACGAACCAAAAATTCAGCTGGTGCACCTTAAAACCTGTCAATGGACAGTGTCGAATGCTCCAGTTTCTCTGAGCATATGTGCGCCAAGCCTTTCGAAACTTGTACTTAAGTGTGTCAAACCAAAATCACTTATCATTGAAACTCCCATGCTATCTGATTTCCATTTTTGTCTAGAAGATGCAAGTGGGTTACAAGTTACTGAGTTTCCTTGCTTGAGAAAGCTTCATCTTCATTTTCCGTGTCTTTACAGTCTCATCACAACATTTTCATCTGCAAGAACTATAAAGGAACTCACACTGGATACAATGCAACGTGTTGAATCTGTTGAATCTGTTAAGTTTTGCCTCGATACACTGTTTGAAATATTTCCGAATCTTTGCTTTCTTAAATTGGGCCCTGGAGTTTTGTCAGAAGCCGAGACTTGTTATCAAGCTGAAGGTTTGGAAAGACGGATAGGGATGAGAGATTTGAAAACGTTTCATGCTAGCTTAAAAACAAACAAGATTGAGTTAAAACTTCCATTTATCATTTCCATTTTGGAAAAATGTACTGACTCCTTCGATATGGAATTGCTCATCTATCACATTGCCGATTCTGACTTTGCTGGTGGAATCATGTCAAAACGTGCAATTAATCATCCAAGACCAAAATGGAGATGGGAACTGTGGAAGGAAGGATCAACAGAAGCGTGGGCTAAAGGTATTTAA
Protein sequence
MDDLPPSLVIEILDRLADSADLARCRVASKSLNALSRDVRSVNLFCSLNRYLKSRAVETKLLVTPFKVILKTLMSEFVALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTDAGFAREWLPAIGRDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNRMNSLKCLTLEFIRLDDEDLSEVNYNFPHLEVLNLIGVGGLNEPKIQLVHLKTCQWTVSNAPVSLSICAPSLSKLVLKCVKPKSLIIETPMLSDFHFCLEDASGLQVTEFPCLRKLHLHFPCLYSLITTFSSARTIKELTLDTMQRVESVESVKFCLDTLFEIFPNLCFLKLGPGVLSEAETCYQAEGLERRIGMRDLKTFHASLKTNKIELKLPFIISILEKCTDSFDMELLIYHIADSDFAGGIMSKRAINHPRPKWRWELWKEGSTEAWAKGI
Homology
BLAST of Lcy13g007500 vs. ExPASy Swiss-Prot
Match:
Q9M0E1 (F-box/LRR-repeat protein At4g29420 OS=Arabidopsis thaliana OX=3702 GN=At4g29420 PE=2 SV=1)
HSP 1 Score: 407.1 bits (1045), Expect = 2.5e-112
Identity = 216/449 (48.11%), Postives = 302/449 (67.26%), Query Frame = 0
Query: 1 MDDLPPSLVIEILDRLADSADLARCRVASKSLNALSRDVRSVNLFCSLNRYLKSRAVETK 60
MD+LPP L I+IL R+ DS LARCRVASK+LN+LSR+VR+VNL C+ +RYLKSR++
Sbjct: 1 MDELPPELWIKILSRINDSESLARCRVASKTLNSLSREVRAVNLICTWSRYLKSRSI--- 60
Query: 61 LLVTPFKVILKTLMSEFVALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTDAGFAREWL 120
++VTPFK I ++L+ + S+S+GV+K+L +S++ + ED S DL+LTD F +EWL
Sbjct: 61 VVVTPFKTIFRSLIENSSKIRSISVGVDKALKGMSFDDFNEED-SKDLYLTDVEFVKEWL 120
Query: 121 PAIGRDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNRMNSLKC 180
P + DL +LSI DFW+QSCWR+S ILALI+S C L++LE+KNAWLSV GL M +L+
Sbjct: 121 PRVREDLENLSISDFWIQSCWRKSDILALISSNCSKLVKLEVKNAWLSVVGLTEMPNLRY 180
Query: 181 LTLEFIRLDDEDLSEVNYNFPHLEVLNLIGVGGLNEPKIQLVHLKTCQWTVSNAPVSLSI 240
LTLEFIRLDDE+L +VN FP L+ LNLIGVGGL EP+I +HLK+C WTVSNAP+SL+I
Sbjct: 181 LTLEFIRLDDENLEKVNDCFPFLQELNLIGVGGLKEPRIHFLHLKSCHWTVSNAPLSLAI 240
Query: 241 CAPSLSKLVLKCVKPKSLIIETPMLSDFHFCLEDASGLQVTEFPCLRKLHLHFPCLYSLI 300
AP+L +L LKC KPKSL++ETP L H +EDA G+ EF L+ L L P +Y LI
Sbjct: 241 VAPNLLELKLKCNKPKSLLVETPKLVQCHLSVEDAEGVSFGEFQDLKTLELVSPDMYRLI 300
Query: 301 TTFSSARTIKELTLDTMQRVESVESVKFCLDTLFEIFPNLCFLKLGPGVLSEAETCYQAE 360
+ S IK+L +D+++ +E E ++ L T+ + FP + L L P S+ ET +Q++
Sbjct: 301 SNISFGNKIKKLAVDSVKSIEQSERLELGLATILKAFPGITSLSLSPRTWSDIETHFQSQ 360
Query: 361 -GLERRIGMRDLKTFHASLKTN---KIELKLPFIISILEKCTDSFDMELLIYHIADSDFA 420
GL G LK A ++ + + + FI SI+ K DM L+I+ D
Sbjct: 361 GGLGDMKGTDSLKQITARVQMSDHTNVHQTVSFIRSIVNKYRGLTDMRLMIHQDKDPRVR 420
Query: 421 GGIMSKRAINHPRPKWRWELWKEGSTEAW 446
++S +++PR +W+W +W EG + W
Sbjct: 421 SNLISTCMMSNPRVRWKWGMWAEGGEDMW 445
BLAST of Lcy13g007500 vs. ExPASy TrEMBL
Match:
A0A6J1G095 (F-box/LRR-repeat protein At4g29420 OS=Cucurbita moschata OX=3662 GN=LOC111449498 PE=4 SV=1)
HSP 1 Score: 811.2 bits (2094), Expect = 2.1e-231
Identity = 403/448 (89.96%), Postives = 420/448 (93.75%), Query Frame = 0
Query: 1 MDDLPPSLVIEILDRLADSADLARCRVASKSLNALSRDVRSVNLFCSLNRYLKSRAVETK 60
MDDLPPSLV+EIL+RLADSADLARCRVASKSLN LSR+VRSVNLFCSL+RYLKSRAVET+
Sbjct: 1 MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRAVETR 60
Query: 61 LLVTPFKVILKTLMSEFVALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTDAGFAREWL 120
LLV PFKVILK+LM++FVALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTD GFAREWL
Sbjct: 61 LLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTDVGFAREWL 120
Query: 121 PAIGRDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNRMNSLKC 180
PAIGR LTSLSIVDFWVQSCWRQSKILALIT CC NL ELELKNAWLSVDGLNR+NSLKC
Sbjct: 121 PAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKC 180
Query: 181 LTLEFIRLDDEDLSEVNYNFPHLEVLNLIGVGGLNEPKIQLVHLKTCQWTVSNAPVSLSI 240
LTLEFIRLDDEDLSEVNYNFPHLE+LNLIGVGGLNEPKI L HLKTC+WTVSNAPVSLSI
Sbjct: 181 LTLEFIRLDDEDLSEVNYNFPHLEILNLIGVGGLNEPKIHLSHLKTCRWTVSNAPVSLSI 240
Query: 241 CAPSLSKLVLKCVKPKSLIIETPMLSDFHFCLEDASGLQVTEFPCLRKLHLHFPCLYSLI 300
CAPSLSKL LKCVKPKSLII+TPMLSDFHFCL+DASGLQV EFPCLRKL LHFPCLYSLI
Sbjct: 241 CAPSLSKLELKCVKPKSLIIQTPMLSDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLI 300
Query: 301 TTFSSARTIKELTLDTMQRVESVESVKFCLDTLFEIFPNLCFLKLGPGVLSEAETCYQAE 360
TTFSSARTIKELTL+TMQR ESVESVK CLDTLFEIFPNL FLKLGPGVLSEAETCYQAE
Sbjct: 301 TTFSSARTIKELTLNTMQRAESVESVKLCLDTLFEIFPNLSFLKLGPGVLSEAETCYQAE 360
Query: 361 GLERRIGMRDLKTFHASLKTNKIELKLPFIISILEKCTDSFDMELLIYHIADSDFAGGIM 420
GL+ RIGMRDLK HASL+T KIELKLPFII ILEKCTDS DMELLIY ADS AGGIM
Sbjct: 361 GLDGRIGMRDLKKLHASLETYKIELKLPFIIPILEKCTDSLDMELLIYRNADSHLAGGIM 420
Query: 421 SKRAINHPRPKWRWELWKEGSTEAWAKG 449
SKRA+NHPRPKWRWELWKEG E WAKG
Sbjct: 421 SKRAVNHPRPKWRWELWKEGLKEPWAKG 448
BLAST of Lcy13g007500 vs. ExPASy TrEMBL
Match:
A0A6J1HNV0 (F-box/LRR-repeat protein At4g29420 OS=Cucurbita maxima OX=3661 GN=LOC111466376 PE=4 SV=1)
HSP 1 Score: 806.6 bits (2082), Expect = 5.2e-230
Identity = 400/449 (89.09%), Postives = 419/449 (93.32%), Query Frame = 0
Query: 1 MDDLPPSLVIEILDRLADSADLARCRVASKSLNALSRDVRSVNLFCSLNRYLKSRAVETK 60
MDDLPPSLV+EIL+RL+DSADLARCRVASKSLN LSR+VRSVNLFCSL+RYLKSRAVET+
Sbjct: 1 MDDLPPSLVLEILNRLSDSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRAVETR 60
Query: 61 LLVTPFKVILKTLMSEFVALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTDAGFAREWL 120
LLV PFKVILK+LM++FVALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTD GFAREWL
Sbjct: 61 LLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTDVGFAREWL 120
Query: 121 PAIGRDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNRMNSLKC 180
PAIGR LTSLSIVDFWVQSCWRQSKILALIT CC NL ELELKNAWLSVDGLNR+NSLKC
Sbjct: 121 PAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKC 180
Query: 181 LTLEFIRLDDEDLSEVNYNFPHLEVLNLIGVGGLNEPKIQLVHLKTCQWTVSNAPVSLSI 240
LTLEFIRLDDEDLSEVNYNFPHLE+LNLIGVGGLNEPKI L LKTC+WTVSNAPVSLSI
Sbjct: 181 LTLEFIRLDDEDLSEVNYNFPHLEILNLIGVGGLNEPKIHLSQLKTCRWTVSNAPVSLSI 240
Query: 241 CAPSLSKLVLKCVKPKSLIIETPMLSDFHFCLEDASGLQVTEFPCLRKLHLHFPCLYSLI 300
CAPSLSKL LKCVKPKSLII+TPM+SDFHFCL+DASGLQV EFPCLRKL LHFPCLYSLI
Sbjct: 241 CAPSLSKLELKCVKPKSLIIQTPMVSDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLI 300
Query: 301 TTFSSARTIKELTLDTMQRVESVESVKFCLDTLFEIFPNLCFLKLGPGVLSEAETCYQAE 360
TTFSSARTIKELTL+TMQR ESVESVK CLDTLFEIFPNL FLKLGPGV SEAETCYQAE
Sbjct: 301 TTFSSARTIKELTLNTMQRAESVESVKLCLDTLFEIFPNLSFLKLGPGVFSEAETCYQAE 360
Query: 361 GLERRIGMRDLKTFHASLKTNKIELKLPFIISILEKCTDSFDMELLIYHIADSDFAGGIM 420
GL+ RIGMRDLK HASL+T KIELKLPFII ILEKCTDS MELLIYH ADS AGGIM
Sbjct: 361 GLDGRIGMRDLKKIHASLETYKIELKLPFIIPILEKCTDSLGMELLIYHNADSHLAGGIM 420
Query: 421 SKRAINHPRPKWRWELWKEGSTEAWAKGI 450
SKRA+NHPRPKWRWELWKEG E WAKGI
Sbjct: 421 SKRAVNHPRPKWRWELWKEGLKEPWAKGI 449
BLAST of Lcy13g007500 vs. ExPASy TrEMBL
Match:
A0A5D3CX32 (F-box/LRR-repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G003230 PE=4 SV=1)
HSP 1 Score: 804.7 bits (2077), Expect = 2.0e-229
Identity = 400/448 (89.29%), Postives = 423/448 (94.42%), Query Frame = 0
Query: 1 MDDLPPSLVIEILDRLADSADLARCRVASKSLNALSRDVRSVNLFCSLNRYLKSRAVETK 60
MDDLPPSLV+EIL+RLADSADLARCRVASKSLN LSRDVRSVNLFCSL+RYLKSRA ETK
Sbjct: 1 MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSRDVRSVNLFCSLDRYLKSRAAETK 60
Query: 61 LLVTPFKVILKTLMSEFVALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTDAGFAREWL 120
LLVTPFKVILKTL+++F+ALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTD G+A+EWL
Sbjct: 61 LLVTPFKVILKTLVNDFLALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTDVGYAKEWL 120
Query: 121 PAIGRDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNRMNSLKC 180
PAIG++LTSLSIVDFWVQSCWRQSKILALIT CC NLLELELKNAWLSVDGL+RMNSLK
Sbjct: 121 PAIGKNLTSLSIVDFWVQSCWRQSKILALITLCCCNLLELELKNAWLSVDGLHRMNSLKY 180
Query: 181 LTLEFIRLDDEDLSEVNYNFPHLEVLNLIGVGGLNEPKIQLVHLKTCQWTVSNAPVSLSI 240
LTLEFIRLDDEDLSE+N NFPHLEVLNLIGVGGLNEPKI+L+HLKTC+WTVSNAPVSL I
Sbjct: 181 LTLEFIRLDDEDLSELNNNFPHLEVLNLIGVGGLNEPKIRLLHLKTCKWTVSNAPVSLCI 240
Query: 241 CAPSLSKLVLKCVKPKSLIIETPMLSDFHFCLEDASGLQVTEFPCLRKLHLHFPCLYSLI 300
APSLSKL LKCVKPK LIIETPMLSDFHFCLEDASGLQV EFPCLRKLHLHFPCL+SLI
Sbjct: 241 YAPSLSKLELKCVKPKFLIIETPMLSDFHFCLEDASGLQVDEFPCLRKLHLHFPCLHSLI 300
Query: 301 TTFSSARTIKELTLDTMQRVESVESVKFCLDTLFEIFPNLCFLKLGPGVLSEAETCYQAE 360
TTFSSARTIKELTLDTMQR ESVESVKFCLDT+FEIFPNLCFLKLGPGVLSEAETCYQAE
Sbjct: 301 TTFSSARTIKELTLDTMQRAESVESVKFCLDTVFEIFPNLCFLKLGPGVLSEAETCYQAE 360
Query: 361 GLERRIGMRDLKTFHASLKTNKIELKLPFIISILEKCTDSFDMELLIYHIADSDFAGGIM 420
GLE R+GMRDLK H+SLKTNKIELKLPFII ILEKCTDSFDM LL+Y ADSD GGIM
Sbjct: 361 GLEGRMGMRDLKKNHSSLKTNKIELKLPFIIPILEKCTDSFDMALLLYQNADSDVTGGIM 420
Query: 421 SKRAINHPRPKWRWELWKEGSTEAWAKG 449
SKRAIN RP+WRWELWK+GS EAWAKG
Sbjct: 421 SKRAINQRRPRWRWELWKQGSREAWAKG 448
BLAST of Lcy13g007500 vs. ExPASy TrEMBL
Match:
A0A1S4DWD1 (F-box/LRR-repeat protein At4g29420 OS=Cucumis melo OX=3656 GN=LOC103488800 PE=4 SV=1)
HSP 1 Score: 804.7 bits (2077), Expect = 2.0e-229
Identity = 400/448 (89.29%), Postives = 423/448 (94.42%), Query Frame = 0
Query: 1 MDDLPPSLVIEILDRLADSADLARCRVASKSLNALSRDVRSVNLFCSLNRYLKSRAVETK 60
MDDLPPSLV+EIL+RLADSADLARCRVASKSLN LSRDVRSVNLFCSL+RYLKSRA ETK
Sbjct: 1 MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSRDVRSVNLFCSLDRYLKSRAAETK 60
Query: 61 LLVTPFKVILKTLMSEFVALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTDAGFAREWL 120
LLVTPFKVILKTL+++F+ALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTD G+A+EWL
Sbjct: 61 LLVTPFKVILKTLVNDFLALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTDVGYAKEWL 120
Query: 121 PAIGRDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNRMNSLKC 180
PAIG++LTSLSIVDFWVQSCWRQSKILALIT CC NLLELELKNAWLSVDGL+RMNSLK
Sbjct: 121 PAIGKNLTSLSIVDFWVQSCWRQSKILALITLCCCNLLELELKNAWLSVDGLHRMNSLKY 180
Query: 181 LTLEFIRLDDEDLSEVNYNFPHLEVLNLIGVGGLNEPKIQLVHLKTCQWTVSNAPVSLSI 240
LTLEFIRLDDEDLSE+N NFPHLEVLNLIGVGGLNEPKI+L+HLKTC+WTVSNAPVSL I
Sbjct: 181 LTLEFIRLDDEDLSELNNNFPHLEVLNLIGVGGLNEPKIRLLHLKTCKWTVSNAPVSLCI 240
Query: 241 CAPSLSKLVLKCVKPKSLIIETPMLSDFHFCLEDASGLQVTEFPCLRKLHLHFPCLYSLI 300
APSLSKL LKCVKPK LIIETPMLSDFHFCLEDASGLQV EFPCLRKLHLHFPCL+SLI
Sbjct: 241 YAPSLSKLELKCVKPKFLIIETPMLSDFHFCLEDASGLQVDEFPCLRKLHLHFPCLHSLI 300
Query: 301 TTFSSARTIKELTLDTMQRVESVESVKFCLDTLFEIFPNLCFLKLGPGVLSEAETCYQAE 360
TTFSSARTIKELTLDTMQR ESVESVKFCLDT+FEIFPNLCFLKLGPGVLSEAETCYQAE
Sbjct: 301 TTFSSARTIKELTLDTMQRAESVESVKFCLDTVFEIFPNLCFLKLGPGVLSEAETCYQAE 360
Query: 361 GLERRIGMRDLKTFHASLKTNKIELKLPFIISILEKCTDSFDMELLIYHIADSDFAGGIM 420
GLE R+GMRDLK H+SLKTNKIELKLPFII ILEKCTDSFDM LL+Y ADSD GGIM
Sbjct: 361 GLEGRMGMRDLKKNHSSLKTNKIELKLPFIIPILEKCTDSFDMALLLYQNADSDVTGGIM 420
Query: 421 SKRAINHPRPKWRWELWKEGSTEAWAKG 449
SKRAIN RP+WRWELWK+GS EAWAKG
Sbjct: 421 SKRAINQRRPRWRWELWKQGSREAWAKG 448
BLAST of Lcy13g007500 vs. ExPASy TrEMBL
Match:
A0A0A0KPS5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G581670 PE=4 SV=1)
HSP 1 Score: 784.6 bits (2025), Expect = 2.1e-223
Identity = 393/448 (87.72%), Postives = 419/448 (93.53%), Query Frame = 0
Query: 1 MDDLPPSLVIEILDRLADSADLARCRVASKSLNALSRDVRSVNLFCSLNRYLKSRAVETK 60
MDDLPPSLV+EIL+RLADSADLARCRVASKS+N LSRDVRSVNLFCSL+RYLKSRA ETK
Sbjct: 1 MDDLPPSLVLEILNRLADSADLARCRVASKSINVLSRDVRSVNLFCSLDRYLKSRAAETK 60
Query: 61 LLVTPFKVILKTLMSEFVALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTDAGFAREWL 120
LLVTPFKVILKTL++EF+ALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTD G+A+EWL
Sbjct: 61 LLVTPFKVILKTLVNEFLALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTDVGYAKEWL 120
Query: 121 PAIGRDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNRMNSLKC 180
P+IG++LTSLSIVDFWVQSCWRQSKILALIT C NLLELELKNAWLSVDGL+RMNSLK
Sbjct: 121 PSIGKNLTSLSIVDFWVQSCWRQSKILALITLYCCNLLELELKNAWLSVDGLHRMNSLKY 180
Query: 181 LTLEFIRLDDEDLSEVNYNFPHLEVLNLIGVGGLNEPKIQLVHLKTCQWTVSNAPVSLSI 240
LTLEFIRLDDEDLSE+N NFPHLEVLNLIGVGGLNEPKI+L+HLKTC+WTVSNAPVSL I
Sbjct: 181 LTLEFIRLDDEDLSELNNNFPHLEVLNLIGVGGLNEPKIRLLHLKTCKWTVSNAPVSLCI 240
Query: 241 CAPSLSKLVLKCVKPKSLIIETPMLSDFHFCLEDASGLQVTEFPCLRKLHLHFPCLYSLI 300
APSLSKL LKCVKPK LIIETPMLSDFHFCLEDASGLQV EFPCLRKLHLHFP L+SLI
Sbjct: 241 YAPSLSKLELKCVKPKFLIIETPMLSDFHFCLEDASGLQVDEFPCLRKLHLHFPRLHSLI 300
Query: 301 TTFSSARTIKELTLDTMQRVESVESVKFCLDTLFEIFPNLCFLKLGPGVLSEAETCYQAE 360
TTFSSART+KELTLDTMQR ES+ESVKFCLDT+FEIFPNL FLKLGPGVL EAET YQAE
Sbjct: 301 TTFSSARTLKELTLDTMQRAESIESVKFCLDTVFEIFPNLSFLKLGPGVLLEAETFYQAE 360
Query: 361 GLERRIGMRDLKTFHASLKTNKIELKLPFIISILEKCTDSFDMELLIYHIADSDFAGGIM 420
GLE R+GMRDLK ++LKTNKIELKLPFIISILEKCTDSFDM LL+Y ADSD GGIM
Sbjct: 361 GLEGRMGMRDLKKNLSNLKTNKIELKLPFIISILEKCTDSFDMTLLLYQNADSDITGGIM 420
Query: 421 SKRAINHPRPKWRWELWKEGSTEAWAKG 449
SKRAINH RP+WRWELWKEGS EAWAKG
Sbjct: 421 SKRAINHRRPRWRWELWKEGSREAWAKG 448
BLAST of Lcy13g007500 vs. NCBI nr
Match:
XP_023542813.1 (F-box/LRR-repeat protein At4g29420 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 812.0 bits (2096), Expect = 2.6e-231
Identity = 402/449 (89.53%), Postives = 420/449 (93.54%), Query Frame = 0
Query: 1 MDDLPPSLVIEILDRLADSADLARCRVASKSLNALSRDVRSVNLFCSLNRYLKSRAVETK 60
MDDLPPSLV+EIL+RLADSADLARCRVASKSLN LSR+VRSVNLFCSL+RYLKSRAVET+
Sbjct: 1 MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRAVETR 60
Query: 61 LLVTPFKVILKTLMSEFVALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTDAGFAREWL 120
LLV PFKVILK+LM++FVALDSVSIGVEKSLGRISY HDDVEDWSDDLFLTD GFAREWL
Sbjct: 61 LLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISYWHDDVEDWSDDLFLTDVGFAREWL 120
Query: 121 PAIGRDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNRMNSLKC 180
PAIGR LTSLSIVDFWVQSCWRQSKILALIT CC NL ELELKNAWLSVDGLNR+NSLKC
Sbjct: 121 PAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKC 180
Query: 181 LTLEFIRLDDEDLSEVNYNFPHLEVLNLIGVGGLNEPKIQLVHLKTCQWTVSNAPVSLSI 240
LTLEFIRLDDEDLSEVNYNFPHLE+LNLIGVGGLNEPKI L HLKTC+WTVSNAPVSLSI
Sbjct: 181 LTLEFIRLDDEDLSEVNYNFPHLEILNLIGVGGLNEPKIHLSHLKTCRWTVSNAPVSLSI 240
Query: 241 CAPSLSKLVLKCVKPKSLIIETPMLSDFHFCLEDASGLQVTEFPCLRKLHLHFPCLYSLI 300
CAPSLSKL LKCVKPKSLII+TPMLSDFHFCL+DASGLQV EFPCLRKL LHFPCLYSLI
Sbjct: 241 CAPSLSKLELKCVKPKSLIIQTPMLSDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLI 300
Query: 301 TTFSSARTIKELTLDTMQRVESVESVKFCLDTLFEIFPNLCFLKLGPGVLSEAETCYQAE 360
TTFSSARTIKELTL+TMQR ESVESVK CLDTLFEIFPNL FLKLGPGV SEAETCYQAE
Sbjct: 301 TTFSSARTIKELTLNTMQRAESVESVKLCLDTLFEIFPNLSFLKLGPGVFSEAETCYQAE 360
Query: 361 GLERRIGMRDLKTFHASLKTNKIELKLPFIISILEKCTDSFDMELLIYHIADSDFAGGIM 420
GL+ RIGMRDLK HASL+T K+ELKLPFII ILEKCTDS DMELLIYH ADS AGGIM
Sbjct: 361 GLDERIGMRDLKKIHASLETYKVELKLPFIIPILEKCTDSLDMELLIYHNADSHLAGGIM 420
Query: 421 SKRAINHPRPKWRWELWKEGSTEAWAKGI 450
SKRA+NHPRPKWRWELWKEG E WAKGI
Sbjct: 421 SKRAVNHPRPKWRWELWKEGLKEPWAKGI 449
BLAST of Lcy13g007500 vs. NCBI nr
Match:
XP_022945179.1 (F-box/LRR-repeat protein At4g29420 [Cucurbita moschata])
HSP 1 Score: 811.2 bits (2094), Expect = 4.4e-231
Identity = 403/448 (89.96%), Postives = 420/448 (93.75%), Query Frame = 0
Query: 1 MDDLPPSLVIEILDRLADSADLARCRVASKSLNALSRDVRSVNLFCSLNRYLKSRAVETK 60
MDDLPPSLV+EIL+RLADSADLARCRVASKSLN LSR+VRSVNLFCSL+RYLKSRAVET+
Sbjct: 1 MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRAVETR 60
Query: 61 LLVTPFKVILKTLMSEFVALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTDAGFAREWL 120
LLV PFKVILK+LM++FVALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTD GFAREWL
Sbjct: 61 LLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTDVGFAREWL 120
Query: 121 PAIGRDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNRMNSLKC 180
PAIGR LTSLSIVDFWVQSCWRQSKILALIT CC NL ELELKNAWLSVDGLNR+NSLKC
Sbjct: 121 PAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKC 180
Query: 181 LTLEFIRLDDEDLSEVNYNFPHLEVLNLIGVGGLNEPKIQLVHLKTCQWTVSNAPVSLSI 240
LTLEFIRLDDEDLSEVNYNFPHLE+LNLIGVGGLNEPKI L HLKTC+WTVSNAPVSLSI
Sbjct: 181 LTLEFIRLDDEDLSEVNYNFPHLEILNLIGVGGLNEPKIHLSHLKTCRWTVSNAPVSLSI 240
Query: 241 CAPSLSKLVLKCVKPKSLIIETPMLSDFHFCLEDASGLQVTEFPCLRKLHLHFPCLYSLI 300
CAPSLSKL LKCVKPKSLII+TPMLSDFHFCL+DASGLQV EFPCLRKL LHFPCLYSLI
Sbjct: 241 CAPSLSKLELKCVKPKSLIIQTPMLSDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLI 300
Query: 301 TTFSSARTIKELTLDTMQRVESVESVKFCLDTLFEIFPNLCFLKLGPGVLSEAETCYQAE 360
TTFSSARTIKELTL+TMQR ESVESVK CLDTLFEIFPNL FLKLGPGVLSEAETCYQAE
Sbjct: 301 TTFSSARTIKELTLNTMQRAESVESVKLCLDTLFEIFPNLSFLKLGPGVLSEAETCYQAE 360
Query: 361 GLERRIGMRDLKTFHASLKTNKIELKLPFIISILEKCTDSFDMELLIYHIADSDFAGGIM 420
GL+ RIGMRDLK HASL+T KIELKLPFII ILEKCTDS DMELLIY ADS AGGIM
Sbjct: 361 GLDGRIGMRDLKKLHASLETYKIELKLPFIIPILEKCTDSLDMELLIYRNADSHLAGGIM 420
Query: 421 SKRAINHPRPKWRWELWKEGSTEAWAKG 449
SKRA+NHPRPKWRWELWKEG E WAKG
Sbjct: 421 SKRAVNHPRPKWRWELWKEGLKEPWAKG 448
BLAST of Lcy13g007500 vs. NCBI nr
Match:
XP_022966761.1 (F-box/LRR-repeat protein At4g29420 [Cucurbita maxima] >XP_022966762.1 F-box/LRR-repeat protein At4g29420 [Cucurbita maxima])
HSP 1 Score: 806.6 bits (2082), Expect = 1.1e-229
Identity = 400/449 (89.09%), Postives = 419/449 (93.32%), Query Frame = 0
Query: 1 MDDLPPSLVIEILDRLADSADLARCRVASKSLNALSRDVRSVNLFCSLNRYLKSRAVETK 60
MDDLPPSLV+EIL+RL+DSADLARCRVASKSLN LSR+VRSVNLFCSL+RYLKSRAVET+
Sbjct: 1 MDDLPPSLVLEILNRLSDSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRAVETR 60
Query: 61 LLVTPFKVILKTLMSEFVALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTDAGFAREWL 120
LLV PFKVILK+LM++FVALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTD GFAREWL
Sbjct: 61 LLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTDVGFAREWL 120
Query: 121 PAIGRDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNRMNSLKC 180
PAIGR LTSLSIVDFWVQSCWRQSKILALIT CC NL ELELKNAWLSVDGLNR+NSLKC
Sbjct: 121 PAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKC 180
Query: 181 LTLEFIRLDDEDLSEVNYNFPHLEVLNLIGVGGLNEPKIQLVHLKTCQWTVSNAPVSLSI 240
LTLEFIRLDDEDLSEVNYNFPHLE+LNLIGVGGLNEPKI L LKTC+WTVSNAPVSLSI
Sbjct: 181 LTLEFIRLDDEDLSEVNYNFPHLEILNLIGVGGLNEPKIHLSQLKTCRWTVSNAPVSLSI 240
Query: 241 CAPSLSKLVLKCVKPKSLIIETPMLSDFHFCLEDASGLQVTEFPCLRKLHLHFPCLYSLI 300
CAPSLSKL LKCVKPKSLII+TPM+SDFHFCL+DASGLQV EFPCLRKL LHFPCLYSLI
Sbjct: 241 CAPSLSKLELKCVKPKSLIIQTPMVSDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLI 300
Query: 301 TTFSSARTIKELTLDTMQRVESVESVKFCLDTLFEIFPNLCFLKLGPGVLSEAETCYQAE 360
TTFSSARTIKELTL+TMQR ESVESVK CLDTLFEIFPNL FLKLGPGV SEAETCYQAE
Sbjct: 301 TTFSSARTIKELTLNTMQRAESVESVKLCLDTLFEIFPNLSFLKLGPGVFSEAETCYQAE 360
Query: 361 GLERRIGMRDLKTFHASLKTNKIELKLPFIISILEKCTDSFDMELLIYHIADSDFAGGIM 420
GL+ RIGMRDLK HASL+T KIELKLPFII ILEKCTDS MELLIYH ADS AGGIM
Sbjct: 361 GLDGRIGMRDLKKIHASLETYKIELKLPFIIPILEKCTDSLGMELLIYHNADSHLAGGIM 420
Query: 421 SKRAINHPRPKWRWELWKEGSTEAWAKGI 450
SKRA+NHPRPKWRWELWKEG E WAKGI
Sbjct: 421 SKRAVNHPRPKWRWELWKEGLKEPWAKGI 449
BLAST of Lcy13g007500 vs. NCBI nr
Match:
XP_016900301.1 (PREDICTED: F-box/LRR-repeat protein At4g29420 [Cucumis melo] >KAA0034102.1 F-box/LRR-repeat protein [Cucumis melo var. makuwa] >TYK15818.1 F-box/LRR-repeat protein [Cucumis melo var. makuwa])
HSP 1 Score: 804.7 bits (2077), Expect = 4.1e-229
Identity = 400/448 (89.29%), Postives = 423/448 (94.42%), Query Frame = 0
Query: 1 MDDLPPSLVIEILDRLADSADLARCRVASKSLNALSRDVRSVNLFCSLNRYLKSRAVETK 60
MDDLPPSLV+EIL+RLADSADLARCRVASKSLN LSRDVRSVNLFCSL+RYLKSRA ETK
Sbjct: 1 MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSRDVRSVNLFCSLDRYLKSRAAETK 60
Query: 61 LLVTPFKVILKTLMSEFVALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTDAGFAREWL 120
LLVTPFKVILKTL+++F+ALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTD G+A+EWL
Sbjct: 61 LLVTPFKVILKTLVNDFLALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTDVGYAKEWL 120
Query: 121 PAIGRDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNRMNSLKC 180
PAIG++LTSLSIVDFWVQSCWRQSKILALIT CC NLLELELKNAWLSVDGL+RMNSLK
Sbjct: 121 PAIGKNLTSLSIVDFWVQSCWRQSKILALITLCCCNLLELELKNAWLSVDGLHRMNSLKY 180
Query: 181 LTLEFIRLDDEDLSEVNYNFPHLEVLNLIGVGGLNEPKIQLVHLKTCQWTVSNAPVSLSI 240
LTLEFIRLDDEDLSE+N NFPHLEVLNLIGVGGLNEPKI+L+HLKTC+WTVSNAPVSL I
Sbjct: 181 LTLEFIRLDDEDLSELNNNFPHLEVLNLIGVGGLNEPKIRLLHLKTCKWTVSNAPVSLCI 240
Query: 241 CAPSLSKLVLKCVKPKSLIIETPMLSDFHFCLEDASGLQVTEFPCLRKLHLHFPCLYSLI 300
APSLSKL LKCVKPK LIIETPMLSDFHFCLEDASGLQV EFPCLRKLHLHFPCL+SLI
Sbjct: 241 YAPSLSKLELKCVKPKFLIIETPMLSDFHFCLEDASGLQVDEFPCLRKLHLHFPCLHSLI 300
Query: 301 TTFSSARTIKELTLDTMQRVESVESVKFCLDTLFEIFPNLCFLKLGPGVLSEAETCYQAE 360
TTFSSARTIKELTLDTMQR ESVESVKFCLDT+FEIFPNLCFLKLGPGVLSEAETCYQAE
Sbjct: 301 TTFSSARTIKELTLDTMQRAESVESVKFCLDTVFEIFPNLCFLKLGPGVLSEAETCYQAE 360
Query: 361 GLERRIGMRDLKTFHASLKTNKIELKLPFIISILEKCTDSFDMELLIYHIADSDFAGGIM 420
GLE R+GMRDLK H+SLKTNKIELKLPFII ILEKCTDSFDM LL+Y ADSD GGIM
Sbjct: 361 GLEGRMGMRDLKKNHSSLKTNKIELKLPFIIPILEKCTDSFDMALLLYQNADSDVTGGIM 420
Query: 421 SKRAINHPRPKWRWELWKEGSTEAWAKG 449
SKRAIN RP+WRWELWK+GS EAWAKG
Sbjct: 421 SKRAINQRRPRWRWELWKQGSREAWAKG 448
BLAST of Lcy13g007500 vs. NCBI nr
Match:
XP_038893164.1 (F-box/LRR-repeat protein At4g29420 [Benincasa hispida])
HSP 1 Score: 800.0 bits (2065), Expect = 1.0e-227
Identity = 396/448 (88.39%), Postives = 418/448 (93.30%), Query Frame = 0
Query: 1 MDDLPPSLVIEILDRLADSADLARCRVASKSLNALSRDVRSVNLFCSLNRYLKSRAVETK 60
MDDLPP LV+EIL+RLADSADLARCRVASKSLN LSR+VRSVNLFCSL+RYLKSRA ETK
Sbjct: 1 MDDLPPPLVLEILNRLADSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRATETK 60
Query: 61 LLVTPFKVILKTLMSEFVALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTDAGFAREWL 120
LLVTPFKVILKTLM++F+ALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTD G+A+EWL
Sbjct: 61 LLVTPFKVILKTLMNDFLALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTDVGYAKEWL 120
Query: 121 PAIGRDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNRMNSLKC 180
PAIGR+LTSLSIVDFWVQSCWRQSKILALIT CC NLLELELKNAWLSVDGL+RM SLKC
Sbjct: 121 PAIGRNLTSLSIVDFWVQSCWRQSKILALITLCCRNLLELELKNAWLSVDGLHRMKSLKC 180
Query: 181 LTLEFIRLDDEDLSEVNYNFPHLEVLNLIGVGGLNEPKIQLVHLKTCQWTVSNAPVSLSI 240
LTLEFIRLDDEDLSEVN NFPHLEVLNL+GVGGLNEPKI L+HLKTC+W VSNAPVSLSI
Sbjct: 181 LTLEFIRLDDEDLSEVNCNFPHLEVLNLMGVGGLNEPKIHLLHLKTCKWKVSNAPVSLSI 240
Query: 241 CAPSLSKLVLKCVKPKSLIIETPMLSDFHFCLEDASGLQVTEFPCLRKLHLHFPCLYSLI 300
APSLSKL LKCVKPKSLIIETPMLSDFHFCLEDASGLQV FPCLRKLHLH PCL SLI
Sbjct: 241 YAPSLSKLELKCVKPKSLIIETPMLSDFHFCLEDASGLQVNGFPCLRKLHLHSPCLDSLI 300
Query: 301 TTFSSARTIKELTLDTMQRVESVESVKFCLDTLFEIFPNLCFLKLGPGVLSEAETCYQAE 360
TTFSSARTIKELTLDTMQR ES+ESVKFCLDT+FEIFPNL FLKLGPGVLSEAETCYQAE
Sbjct: 301 TTFSSARTIKELTLDTMQRAESIESVKFCLDTVFEIFPNLSFLKLGPGVLSEAETCYQAE 360
Query: 361 GLERRIGMRDLKTFHASLKTNKIELKLPFIISILEKCTDSFDMELLIYHIADSDFAGGIM 420
GLE R+GMRDLK H+SLKT KIE+KLPFIISILEKCTD FDM LL+YH ADSD GGI+
Sbjct: 361 GLEGRMGMRDLKKIHSSLKTYKIEVKLPFIISILEKCTDPFDMALLVYHNADSDITGGII 420
Query: 421 SKRAINHPRPKWRWELWKEGSTEAWAKG 449
KRA NHPRP+WRWELWKEGS EAWAKG
Sbjct: 421 PKRATNHPRPRWRWELWKEGSMEAWAKG 448
BLAST of Lcy13g007500 vs. TAIR 10
Match:
AT4G29420.1 (F-box/RNI-like superfamily protein )
HSP 1 Score: 407.1 bits (1045), Expect = 1.8e-113
Identity = 216/449 (48.11%), Postives = 302/449 (67.26%), Query Frame = 0
Query: 1 MDDLPPSLVIEILDRLADSADLARCRVASKSLNALSRDVRSVNLFCSLNRYLKSRAVETK 60
MD+LPP L I+IL R+ DS LARCRVASK+LN+LSR+VR+VNL C+ +RYLKSR++
Sbjct: 1 MDELPPELWIKILSRINDSESLARCRVASKTLNSLSREVRAVNLICTWSRYLKSRSI--- 60
Query: 61 LLVTPFKVILKTLMSEFVALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTDAGFAREWL 120
++VTPFK I ++L+ + S+S+GV+K+L +S++ + ED S DL+LTD F +EWL
Sbjct: 61 VVVTPFKTIFRSLIENSSKIRSISVGVDKALKGMSFDDFNEED-SKDLYLTDVEFVKEWL 120
Query: 121 PAIGRDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNRMNSLKC 180
P + DL +LSI DFW+QSCWR+S ILALI+S C L++LE+KNAWLSV GL M +L+
Sbjct: 121 PRVREDLENLSISDFWIQSCWRKSDILALISSNCSKLVKLEVKNAWLSVVGLTEMPNLRY 180
Query: 181 LTLEFIRLDDEDLSEVNYNFPHLEVLNLIGVGGLNEPKIQLVHLKTCQWTVSNAPVSLSI 240
LTLEFIRLDDE+L +VN FP L+ LNLIGVGGL EP+I +HLK+C WTVSNAP+SL+I
Sbjct: 181 LTLEFIRLDDENLEKVNDCFPFLQELNLIGVGGLKEPRIHFLHLKSCHWTVSNAPLSLAI 240
Query: 241 CAPSLSKLVLKCVKPKSLIIETPMLSDFHFCLEDASGLQVTEFPCLRKLHLHFPCLYSLI 300
AP+L +L LKC KPKSL++ETP L H +EDA G+ EF L+ L L P +Y LI
Sbjct: 241 VAPNLLELKLKCNKPKSLLVETPKLVQCHLSVEDAEGVSFGEFQDLKTLELVSPDMYRLI 300
Query: 301 TTFSSARTIKELTLDTMQRVESVESVKFCLDTLFEIFPNLCFLKLGPGVLSEAETCYQAE 360
+ S IK+L +D+++ +E E ++ L T+ + FP + L L P S+ ET +Q++
Sbjct: 301 SNISFGNKIKKLAVDSVKSIEQSERLELGLATILKAFPGITSLSLSPRTWSDIETHFQSQ 360
Query: 361 -GLERRIGMRDLKTFHASLKTN---KIELKLPFIISILEKCTDSFDMELLIYHIADSDFA 420
GL G LK A ++ + + + FI SI+ K DM L+I+ D
Sbjct: 361 GGLGDMKGTDSLKQITARVQMSDHTNVHQTVSFIRSIVNKYRGLTDMRLMIHQDKDPRVR 420
Query: 421 GGIMSKRAINHPRPKWRWELWKEGSTEAW 446
++S +++PR +W+W +W EG + W
Sbjct: 421 SNLISTCMMSNPRVRWKWGMWAEGGEDMW 445
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9M0E1 | 2.5e-112 | 48.11 | F-box/LRR-repeat protein At4g29420 OS=Arabidopsis thaliana OX=3702 GN=At4g29420 ... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1G095 | 2.1e-231 | 89.96 | F-box/LRR-repeat protein At4g29420 OS=Cucurbita moschata OX=3662 GN=LOC111449498... | [more] |
A0A6J1HNV0 | 5.2e-230 | 89.09 | F-box/LRR-repeat protein At4g29420 OS=Cucurbita maxima OX=3661 GN=LOC111466376 P... | [more] |
A0A5D3CX32 | 2.0e-229 | 89.29 | F-box/LRR-repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... | [more] |
A0A1S4DWD1 | 2.0e-229 | 89.29 | F-box/LRR-repeat protein At4g29420 OS=Cucumis melo OX=3656 GN=LOC103488800 PE=4 ... | [more] |
A0A0A0KPS5 | 2.1e-223 | 87.72 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G581670 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
XP_023542813.1 | 2.6e-231 | 89.53 | F-box/LRR-repeat protein At4g29420 [Cucurbita pepo subsp. pepo] | [more] |
XP_022945179.1 | 4.4e-231 | 89.96 | F-box/LRR-repeat protein At4g29420 [Cucurbita moschata] | [more] |
XP_022966761.1 | 1.1e-229 | 89.09 | F-box/LRR-repeat protein At4g29420 [Cucurbita maxima] >XP_022966762.1 F-box/LRR-... | [more] |
XP_016900301.1 | 4.1e-229 | 89.29 | PREDICTED: F-box/LRR-repeat protein At4g29420 [Cucumis melo] >KAA0034102.1 F-box... | [more] |
XP_038893164.1 | 1.0e-227 | 88.39 | F-box/LRR-repeat protein At4g29420 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
AT4G29420.1 | 1.8e-113 | 48.11 | F-box/RNI-like superfamily protein | [more] |