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Lcy13g007490 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTGGATATTTTGAGAATACTGGTGGTCGGGAACCCGACGCGAATCGGAAAGCGACATTGTATGCAGAAATCTACGCAGTTTTGGGGATTCTCAATTCAAGCCAGCTTCTTAGGGCACTGATTTTCAGGTTTCATTTCCGTTTTTGTTTGTGAATCGATTGTGTTGTTCCAATTTTGATTATATAGAAGAAAAAAAAGCTGTAAATTCGCGTTGTATTTGACGGAGATCGGTCGAGAATCGAGATGACTCCTGTTTGTCCCTTCGTGAAATCTGCTCGTCCCGACGACGCTTCTTCGCGGAAGCACCAGCCGGAATCTGCTTGCCCTTTCGGGAAATCCGGCCGTTCCGATGATGCTTCTTCAAGAAAGCCGCAATCGGAGGCTGCTTGTCCGTTTTCGAAATTTGCTCGTCCAGACGATGCCTCTTTGAGGAAGAATCAGGCTGAGGCGGAGAGTAACGGGGCGGAGAAAGACGTTGCCGATGCTGCTAAAACTGGTGGCAAGTGTCCGTTCGGATATGATTCTCAAACTTTCAAGATTGGCCCTCTAAGCTGTATGATTTGTCAGGCACTTCTCTTTGAATGCAGCAGATGTGTCCCCTGTTCTCACATTTTCTGCAAGTAAGTAATCGTCCGGGGTGTTTCTTATTTTCGTTTTGCTTTCTTTTGAGATCCATTCAGTCATTCATTTGTTTGTTTCTTCTTGAATTGAACTAGAGCTTGTATATCGCGTTTCAAAGACTGTCCCCTGTGTGGAGCCGACATTGAGAAGATTGAAGCACACGATGATCTGCAAGCTACGGTTGATCGCTTCATTGAAGGTCACGCGAGAATCAAGAGATCCCAGGTGAACTCAGACAAAGAGCAGGAGGAAGTTAGTGAAAGTAAAGTAATTATTTATGAAGACTTGTCCATGGAGAGAGGTGCTTTCTTGATCCAACAAGCCATGAGGGTAATATTCCTTGTTGTTTTCTTTCTTTTTCGTTTTCGCCTGTGATATGAATGTATGTTTGATCATCTCAATGCAATCAATTGAAACTTTCTTTTGAAATCCTTTTAGTCAGTGTGTGGTGTGAGCTTCATTTTCTTAGGGGTTGTCCGAAAAATTATTTTGAAATGTTTTTTCTTTTAGTTTTCAAAACTATTTTTTAGTACGGAAATTATTGTTTTCATGCAGGTAAAATTTTTTTCCACATTCATAATTTTGAAAGGAGTAAGCAGTTTCCCCTTTTTTGGAAGGATCATTTCTGACTAGAAGATCACCCCGTCCTCTTTTCTCTGTCTCTTATATATATATATATATATATATAAGGATTGGAATTGATAGTTTCATGTGTGAGAAAACACGAAAAGAAAGCAAGGAAAAAAATATTTTTGTGAACAGTTATCCAAACACCATTTACAGAATAGGAATTTTCATTTCCTAACATTGCCTTTTATTCTTAAAAGTTTTAAAATCTGGCTTTTTATTGCAGGCATTTCGGGCCCAGAATATTGAAAGTGCCAAATCCAGGCTCACTATCTGCGTTGAAGATATTCGAGACCAATTAGAAAGAGTGGGCAATTCATCAGAATTGTGCTCTCAGCTTGGAGCGGTTCTAGGCACACTTGGTGATTGTTGGTATGTTGGTTCTCTTCTCTCTTTCATATGATGGGACATATACTTAAAATGCAACAACATCCCTTCAATATCGTACATTATTTTTTAAGCAATTTAATTTAATACAGTCAGTTATCGAGGAATTGGGGGGTGAACAGCATGGTGGTTGTGCATACAATTAGCAAGCCTAACCCAGGGGTTTCATATTAGATCGTATTTGTTGTAGGTGACAGTGGCCAACTAGTAGGTCTTTTGGGAACTCAGATTCTGGAGTTGTCTTACTAATAACTAATATTTGTAATTAAATGAAATCCTGCTGTGAACATTCCTTGCAATTATCCGAACTTACGTGTCCACAATTTTCTAGTCCATCAAAACAATATTTATAAATCCTGATGTAAAGTTCTGTTGTTTGATCCAACTTTACAGTCGAGCAGCTGGAGATGCTAGTTCCGCAATAAAGCACTTTGAAGAAAGTGTAGAATTTCTCTCAAAACTGCCTGAAAAGACTCACGAGGTACTTTATTTGAAACTTCTGTGAGTGAACTTTGTGCATTATCAACTGCTTTCTTTTACAATACTTAGTAACTCTTTTTTTTTTTTTTCTTTTTTCAGGTCACACATACACTTTCTGTGTCACTAAATAAAATTGGCGATCTTAAGTATTATGAAGGAGACCTCCAAGCTGCAAGATCTTATTATCTCCGCTCTCTTAATGTTCGCAAAGATGCAAGCAAGCAACATCCAGATGATCCAGCCCAGGTTTGTGATTGTTAATTTCTCATGTGCAATCTTCTTTCCTAAAAGATAACATGTCTTATATTCTATTCAGTTCTAGAAGCTTTTCGTGATAGGTAGTTTTATTAAGGTTCATCAACCAAGATGGATGTTAATCGACTGTAAAGTCCTAATGACCAAAAACTAATTTGTGAAGTCAACTGCATCTTGAACGCTGTGAAGTGTGAAATAAAGAACTTAGGGAATCTTTTTGAGTGGACTAAGAAAGCACAAGGGTACAAAAAACTGACCTGAATGTCTCTTTCCTCTTCAAAATTGTCCACCTTTTCTTTTGAATTCCATGTATCTAAAGGAATGCGTAGCTATACCATTAAATACTGACATAGTACAAATCAGCTTGATGTAGTAGCTTAGTAGGGATAGTTTCAATATATATATATATATATATATATTTTAAGTTTACTGTTTTAGTTATTGGTTGCTGGCCTGCTATTAGTTAGTAAATTAGTTCTCTATAGATAGAGGTATTAAACTCCTGTATTAGGGACCTTGAAATAAGTTTGACATTAAAAAACATTTCTTTGAGAATACTTAGAGGGTCAATGTTGGGCTGCATCATTTGTATCAGTGCGATGTTCTCTCCTGAGCAAATGACTGTTGTCAATTGAGATGGAAAAACATCCTATTGAAACAAATTGTAGGAGGGGGCCTTATGTCCAACAGCACATAAGAAGTTCCTAGAGGCTAACTGGTAAAATAAACCTCTTTCCAAGAAAAATAGAACTTAATTAATCCTTCATTGCTATCAATGAAATTCCGGTGGGACTTGTCTCCACGGAGTAAAATTGCCAGAAAGAATAGTTATATTGGTGAACCCAATTTAATCTCGATAATTAGTTGGTTGAGTACTCTTCAAATGCTCACTATCCCTTTGGAATTTAGAATATGATTGGCGATTTTCTAGAATCCAAGAACTGAAGAGTTCTTAGAAAGACCACAGGTTCGAAAAGGGTATTTCAATGTTTATGAAAAATGTGGTAGGAAGTCTAGGTCCGTTCATGCTTACAAAGACTTTGGTTGTGGATTTTATCCTGACATTAACATATGTTTTTTAAAAAAGTACTGTACGATTTCCTCCTATTTTTTATTTACCTTATTGCTTGCTACAGATCCTAGATGTGGCTGTTTCGCTTGCAAAAGTGGCTGATGTGGACAGTGGTCTAGGAAATGAAGATATGGCAGTTAATGGATTTGATGAAGGAATAAAGTTGTTGGAATCATTATCGCTGAATTTTGAGAATTCTGCTCTTGAACAGCGAGTAAGATTTAGAATGACTTTCTAAGTGTTTAAAAAATATTTTTAAGTGTAAAAAAAGGGTTTTTAAACACTTAGAAAACCATTCCAAACAGACACTAATATTCTTTGTTTCCTTTCATTTCTGGTTAGTTTCGATCAAAGAGTTGATCCACATTTACAATTTACTTTGCAGCGTCAATCTGTGCTGAAGTTCCTTGAAGGTCAACTTGCGGAGCGACAAAAGCCAACTCAATCCAGTTGATTGAAAGACATGATGCCATTCTGTTAGAGATTATTCCAATCTTCTATATGCAATGTCTTAGTTAAGCGAATAAGCTCCTTTTAGCCGAGCAACGGGGAAGATCGCGAGCATTAAGGAAATTTGTCACTATGGAATACATCGTCTCGGATGTTCTTATCGAGTTTTCTTCAGCGTATAGTACAGAAAGCATACCTAATCGATGTCGCTTTAAGCATGAATCGGCCTGGCAGTCGGGAAGTCATGGCCTTTCAAATCTGCCTGGCAGTCACGTCTCTTGTGTATAATGTTTTTTCTTATCCTATGGTTTTGTACAATTTAGCAGGAACTCCTCACGCTCTTTTATAGTGAAGTTGTTTGCTAAGCTGCAATCTCTGAAATAAATTGAACTTAATTAGTACATGGTCTATAGTAGGTTTCTCCCATTCTGTCTTCCTCATTTCTTTGCCTTCTTGGGGAAGATTATTGTTGAGTTATGCAATAAACGCTGAAAATGGTGATGTGATGCTCTTTAGTACAACA TTGGATATTTTGAGAATACTGGTGGTCGGGAACCCGACGCGAATCGGAAAGCGACATTGTATGCAGAAATCTACGCAGTTTTGGGGATTCTCAATTCAAGCCAGCTTCTTAGGGCACTGATTTTCAGGTTTCATTTCCGTTTTTGTTTGTGAATCGATTGTGTTGTTCCAATTTTGATTATATAGAAGAAAAAAAAGCTGTAAATTCGCGTTGTATTTGACGGAGATCGGTCGAGAATCGAGATGACTCCTGTTTGTCCCTTCGTGAAATCTGCTCGTCCCGACGACGCTTCTTCGCGGAAGCACCAGCCGGAATCTGCTTGCCCTTTCGGGAAATCCGGCCGTTCCGATGATGCTTCTTCAAGAAAGCCGCAATCGGAGGCTGCTTGTCCGTTTTCGAAATTTGCTCGTCCAGACGATGCCTCTTTGAGGAAGAATCAGGCTGAGGCGGAGAGTAACGGGGCGGAGAAAGACGTTGCCGATGCTGCTAAAACTGGTGGCAAGTGTCCGTTCGGATATGATTCTCAAACTTTCAAGATTGGCCCTCTAAGCTGTATGATTTGTCAGGCACTTCTCTTTGAATGCAGCAGATGTGTCCCCTGTTCTCACATTTTCTGCAAAGCTTGTATATCGCGTTTCAAAGACTGTCCCCTGTGTGGAGCCGACATTGAGAAGATTGAAGCACACGATGATCTGCAAGCTACGGTTGATCGCTTCATTGAAGGTCACGCGAGAATCAAGAGATCCCAGGTGAACTCAGACAAAGAGCAGGAGGAAGTTAGTGAAAGTAAAGTAATTATTTATGAAGACTTGTCCATGGAGAGAGGTGCTTTCTTGATCCAACAAGCCATGAGGGCATTTCGGGCCCAGAATATTGAAAGTGCCAAATCCAGGCTCACTATCTGCGTTGAAGATATTCGAGACCAATTAGAAAGAGTGGGCAATTCATCAGAATTGTGCTCTCAGCTTGGAGCGGTTCTAGGCACACTTGGTGATTGTTGTCGAGCAGCTGGAGATGCTAGTTCCGCAATAAAGCACTTTGAAGAAAGTGTAGAATTTCTCTCAAAACTGCCTGAAAAGACTCACGAGGTCACACATACACTTTCTGTGTCACTAAATAAAATTGGCGATCTTAAGTATTATGAAGGAGACCTCCAAGCTGCAAGATCTTATTATCTCCGCTCTCTTAATGTTCGCAAAGATGCAAGCAAGCAACATCCAGATGATCCAGCCCAGATCCTAGATGTGGCTGTTTCGCTTGCAAAAGTGGCTGATGTGGACAGTGGTCTAGGAAATGAAGATATGGCAGTTAATGGATTTGATGAAGGAATAAAGTTGTTGGAATCATTATCGCTGAATTTTGAGAATTCTGCTCTTGAACAGCGACGTCAATCTGTGCTGAAGTTCCTTGAAGGTCAACTTGCGGAGCGACAAAAGCCAACTCAATCCAGTTGATTGAAAGACATGATGCCATTCTGTTAGAGATTATTCCAATCTTCTATATGCAATGTCTTAGTTAAGCGAATAAGCTCCTTTTAGCCGAGCAACGGGGAAGATCGCGAGCATTAAGGAAATTTGTCACTATGGAATACATCGTCTCGGATGTTCTTATCGAGTTTTCTTCAGCGTATAGTACAGAAAGCATACCTAATCGATGTCGCTTTAAGCATGAATCGGCCTGGCAGTCGGGAAGTCATGGCCTTTCAAATCTGCCTGGCAGTCACGTCTCTTGTGTATAATGTTTTTTCTTATCCTATGGTTTTGTACAATTTAGCAGGAACTCCTCACGCTCTTTTATAGTGAAGTTGTTTGCTAAGCTGCAATCTCTGAAATAAATTGAACTTAATTAGTACATGGTCTATAGTAGGTTTCTCCCATTCTGTCTTCCTCATTTCTTTGCCTTCTTGGGGAAGATTATTGTTGAGTTATGCAATAAACGCTGAAAATGGTGATGTGATGCTCTTTAGTACAACA ATGACTCCTGTTTGTCCCTTCGTGAAATCTGCTCGTCCCGACGACGCTTCTTCGCGGAAGCACCAGCCGGAATCTGCTTGCCCTTTCGGGAAATCCGGCCGTTCCGATGATGCTTCTTCAAGAAAGCCGCAATCGGAGGCTGCTTGTCCGTTTTCGAAATTTGCTCGTCCAGACGATGCCTCTTTGAGGAAGAATCAGGCTGAGGCGGAGAGTAACGGGGCGGAGAAAGACGTTGCCGATGCTGCTAAAACTGGTGGCAAGTGTCCGTTCGGATATGATTCTCAAACTTTCAAGATTGGCCCTCTAAGCTGTATGATTTGTCAGGCACTTCTCTTTGAATGCAGCAGATGTGTCCCCTGTTCTCACATTTTCTGCAAAGCTTGTATATCGCGTTTCAAAGACTGTCCCCTGTGTGGAGCCGACATTGAGAAGATTGAAGCACACGATGATCTGCAAGCTACGGTTGATCGCTTCATTGAAGGTCACGCGAGAATCAAGAGATCCCAGGTGAACTCAGACAAAGAGCAGGAGGAAGTTAGTGAAAGTAAAGTAATTATTTATGAAGACTTGTCCATGGAGAGAGGTGCTTTCTTGATCCAACAAGCCATGAGGGCATTTCGGGCCCAGAATATTGAAAGTGCCAAATCCAGGCTCACTATCTGCGTTGAAGATATTCGAGACCAATTAGAAAGAGTGGGCAATTCATCAGAATTGTGCTCTCAGCTTGGAGCGGTTCTAGGCACACTTGGTGATTGTTGTCGAGCAGCTGGAGATGCTAGTTCCGCAATAAAGCACTTTGAAGAAAGTGTAGAATTTCTCTCAAAACTGCCTGAAAAGACTCACGAGGTCACACATACACTTTCTGTGTCACTAAATAAAATTGGCGATCTTAAGTATTATGAAGGAGACCTCCAAGCTGCAAGATCTTATTATCTCCGCTCTCTTAATGTTCGCAAAGATGCAAGCAAGCAACATCCAGATGATCCAGCCCAGATCCTAGATGTGGCTGTTTCGCTTGCAAAAGTGGCTGATGTGGACAGTGGTCTAGGAAATGAAGATATGGCAGTTAATGGATTTGATGAAGGAATAAAGTTGTTGGAATCATTATCGCTGAATTTTGAGAATTCTGCTCTTGAACAGCGACGTCAATCTGTGCTGAAGTTCCTTGAAGGTCAACTTGCGGAGCGACAAAAGCCAACTCAATCCAGTTGA MTPVCPFVKSARPDDASSRKHQPESACPFGKSGRSDDASSRKPQSEAACPFSKFARPDDASLRKNQAEAESNGAEKDVADAAKTGGKCPFGYDSQTFKIGPLSCMICQALLFECSRCVPCSHIFCKACISRFKDCPLCGADIEKIEAHDDLQATVDRFIEGHARIKRSQVNSDKEQEEVSESKVIIYEDLSMERGAFLIQQAMRAFRAQNIESAKSRLTICVEDIRDQLERVGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKTHEVTHTLSVSLNKIGDLKYYEGDLQAARSYYLRSLNVRKDASKQHPDDPAQILDVAVSLAKVADVDSGLGNEDMAVNGFDEGIKLLESLSLNFENSALEQRRQSVLKFLEGQLAERQKPTQSS Homology
BLAST of Lcy13g007490 vs. ExPASy Swiss-Prot
Match: Q9M2V1 (Protein NCA1 OS=Arabidopsis thaliana OX=3702 GN=NCA1 PE=1 SV=1) HSP 1 Score: 503.8 bits (1296), Expect = 1.8e-141 Identity = 266/396 (67.17%), Postives = 311/396 (78.54%), Query Frame = 0
BLAST of Lcy13g007490 vs. ExPASy Swiss-Prot
Match: A5WW08 (E3 ubiquitin-protein ligase CHFR OS=Danio rerio OX=7955 GN=chfr PE=2 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 1.8e-05 Identity = 26/72 (36.11%), Postives = 38/72 (52.78%), Query Frame = 0
BLAST of Lcy13g007490 vs. ExPASy Swiss-Prot
Match: Q5FWP4 (E3 ubiquitin-protein ligase CHFR OS=Xenopus laevis OX=8355 GN=chfr PE=1 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 4.1e-05 Identity = 49/164 (29.88%), Postives = 72/164 (43.90%), Query Frame = 0
BLAST of Lcy13g007490 vs. ExPASy Swiss-Prot
Match: Q810L3 (E3 ubiquitin-protein ligase CHFR OS=Mus musculus OX=10090 GN=Chfr PE=1 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 5.4e-05 Identity = 26/72 (36.11%), Postives = 38/72 (52.78%), Query Frame = 0
BLAST of Lcy13g007490 vs. ExPASy Swiss-Prot
Match: Q5RF77 (E3 ubiquitin-protein ligase CHFR OS=Pongo abelii OX=9601 GN=CHFR PE=2 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 5.4e-05 Identity = 26/72 (36.11%), Postives = 38/72 (52.78%), Query Frame = 0
BLAST of Lcy13g007490 vs. ExPASy TrEMBL
Match: A0A6J1CBV4 (protein NCA1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010138 PE=4 SV=1) HSP 1 Score: 725.7 bits (1872), Expect = 1.1e-205 Identity = 370/398 (92.96%), Postives = 381/398 (95.73%), Query Frame = 0
BLAST of Lcy13g007490 vs. ExPASy TrEMBL
Match: A0A6J1HT54 (protein NCA1 OS=Cucurbita maxima OX=3661 GN=LOC111466377 PE=4 SV=1) HSP 1 Score: 713.8 bits (1841), Expect = 4.2e-202 Identity = 371/404 (91.83%), Postives = 383/404 (94.80%), Query Frame = 0
BLAST of Lcy13g007490 vs. ExPASy TrEMBL
Match: A0A0A0KPN8 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G581690 PE=4 SV=1) HSP 1 Score: 709.9 bits (1831), Expect = 6.0e-201 Identity = 363/404 (89.85%), Postives = 384/404 (95.05%), Query Frame = 0
BLAST of Lcy13g007490 vs. ExPASy TrEMBL
Match: A0A6J1G074 (protein NCA1-like OS=Cucurbita moschata OX=3662 GN=LOC111449499 PE=4 SV=1) HSP 1 Score: 709.9 bits (1831), Expect = 6.0e-201 Identity = 369/404 (91.34%), Postives = 381/404 (94.31%), Query Frame = 0
BLAST of Lcy13g007490 vs. ExPASy TrEMBL
Match: A0A5D3CV76 (Binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G003220 PE=4 SV=1) HSP 1 Score: 707.6 bits (1825), Expect = 3.0e-200 Identity = 362/404 (89.60%), Postives = 381/404 (94.31%), Query Frame = 0
BLAST of Lcy13g007490 vs. NCBI nr
Match: XP_022139165.1 (protein NCA1 isoform X1 [Momordica charantia] >XP_022139166.1 protein NCA1 isoform X1 [Momordica charantia]) HSP 1 Score: 725.7 bits (1872), Expect = 2.2e-205 Identity = 370/398 (92.96%), Postives = 381/398 (95.73%), Query Frame = 0
BLAST of Lcy13g007490 vs. NCBI nr
Match: XP_038893051.1 (protein NCA1 [Benincasa hispida] >XP_038893052.1 protein NCA1 [Benincasa hispida]) HSP 1 Score: 716.5 bits (1848), Expect = 1.3e-202 Identity = 369/403 (91.56%), Postives = 384/403 (95.29%), Query Frame = 0
BLAST of Lcy13g007490 vs. NCBI nr
Match: XP_022966763.1 (protein NCA1 [Cucurbita maxima]) HSP 1 Score: 713.8 bits (1841), Expect = 8.6e-202 Identity = 371/404 (91.83%), Postives = 383/404 (94.80%), Query Frame = 0
BLAST of Lcy13g007490 vs. NCBI nr
Match: XP_023542121.1 (protein NCA1-like [Cucurbita pepo subsp. pepo] >XP_023542122.1 protein NCA1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 710.3 bits (1832), Expect = 9.5e-201 Identity = 369/404 (91.34%), Postives = 382/404 (94.55%), Query Frame = 0
BLAST of Lcy13g007490 vs. NCBI nr
Match: XP_004147090.1 (protein NCA1 [Cucumis sativus] >KGN51585.1 hypothetical protein Csa_009177 [Cucumis sativus]) HSP 1 Score: 709.9 bits (1831), Expect = 1.2e-200 Identity = 363/404 (89.85%), Postives = 384/404 (95.05%), Query Frame = 0
BLAST of Lcy13g007490 vs. TAIR 10
Match: AT3G54360.1 (zinc ion binding ) HSP 1 Score: 503.8 bits (1296), Expect = 1.3e-142 Identity = 266/396 (67.17%), Postives = 311/396 (78.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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