Lcy13g004960 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy13g004960
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	PB1 domain-containing protein
Location	Chr13: 4250821 .. 4253880 (-)
RNA-Seq Expression	Lcy13g004960
Synteny	Lcy13g004960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAGCATTCTGCTCCCAAATTCCAACTCCACCCTTCCTCCGCCGCACGCCATGACGGAACCGCCGCCTCCGCCACCTGTTCAGCCGCTTCCGCCGGCGGTGTCGCCTCATCTCAACTATCCGGAGTCGTTGGACTCTTCTCCGAGGTCTCGCAACACCGACACGTGGGACGAGCCTCTTGCCCCCGCTGCCCTTGCCGGACGGCTCCGCCTCATGTGCAGCTACGGCGGCCATATAGTCCCTCGCCCTCACGATAAGACTCTGTGCTATGTCTGTGGTGAGACGCGGATCGTTGTTGTCGACCGCCATACCTCTTTATCTGACCTCAGTGCGCGTTTGTCGAAGACGCTTCTCAATGGTCGGCCGTTCACCCTGAAATATCAGCTTCCAAACGAGGATTTGGATTCTCTCATTTCTGTCACCACCGATGAGGATTTGGAGAATATGATTGACGAGTATGATCGGACGGCGAGTAATTCGTCTAACCCTGCGGCAAAACCCTCGCGACTTAGGTTGTTTCTGTTCCCCATTAAGCCGGATGTTTCTCAGTCGATCGGGCCAATTCTCGAGAGCTCGACTAGTTCTGATGACTGGTTTTTGAATGCTTTGAATGGTGCCGGTTTGCTCAATAGAGGTTTTTCGGACTCTGCATCGGTCAATTGCTTGTTAGGGCTTGATGATGATGTTGGTGTCAATAACCTCGATTCGGCTCCGAGGGAGGTAGAGGGTTCTCAGCCTGGTTCGTTTGGAAATGGTAAGGGTGGAAAACAGGATGTTCATTCTGTCCCTGATTCGCCGATGATCGAGACGACGTCGTCTTTTGGGTCTACCTCCTCTTCGCCTTCTCTGGCGAATTTGCCGCCGATTCGGGTTCATGTGGAGGATAGTGGCAATAGCGGTGGCGGTGGTATGGGTGCAGTTCGAGTTCAAGATCAGAAAGTGGGAATTGAGGAGCAATTTTCGCAGATGAGTGTTGGCGGTGGTGGTGTTGGGCAAAAGCAGCAAGAGGAAGCTTTCGCGGTACTCTCTTCGCCGCCTCCTTTGCCTACGACTATTGTGGCTACGGCGGCGGGCTCTGCAATTCCTGTGAGCTCGGCTGCCGGAGTAGGTGTAGGAGAATATTCGAATCGGGTGATCTCTGATGACGAGAGATCGGACCATGGGGCTCCGGTCGGATACCGGAAACCACTGCCACCACAACCACAGCCTCTTGCCCCCCAATTGCAGCAGAAATCAAGTGGACTTGTTGATATACCTTCCCCGGACTCAGTGTCAAGGTACCAATTATATGATTTTCTTGATCATTTTGGTATTACAAATTCTGCTTTGCTTTTGCTATCAATTAGATTATGATAGTTGTTGGTCTGGAGGAGTAATTGGTTGTTAGTCTGAGTTGGTGCATTTTCTGTCGTGTTTTGGTTCTTCAGTGATAGTAGTATAAACAATCCGATGTCTCGCTCAAAACCTGTGATGTATCAAGAACAAGTTATTCATCAAATCCCCTCTTCAGCCACTAGGCTTCCTGGCAGTCCCGCAGATCCAAAAGTCAATATTTCTGATCAGAACACTCGGGTCCATATTCCACAACAGGTCCAAGAATCAGGATATGTGTTACAATCTCATTACGATCAGCATCAACAACAGCAACTTCAGCAACAACAGCAGCTTCAGCAACATCAGCAACTTCAGCAACAGCAGCAACTTCAGCAGCAACAACAACAGCAGCAACAGCAACACCCACCTCAACCACAGCAATTCATACATGCAGGCGCTCACTACATCCAACAGCACCCATCTGGTGCAGTGCCTATTCCAGCATTTTTCCCTGTGTATTCTCCTCAGCACCATCATCATCCCCATCAGATGGAGCAGCAGTATCCAGTCTACTACCTGCCTGCTAGACAGGCCCAAGCTTATGGCAATTTGCCAGTTCAGCAATCTAGTGAGGCTGCCACTGCTATTCCTCCTGGTCGGCCCCAAACCCCTCCTAATCCAACTTTGGTCACAACTGCAGGTTACAACCCCATGAGGAATGCCCCTATTGCAAAAACTGAAATGGCTGCCAATGCATTCAAACAGACAACTACACCTGCTCAGTCTTTAGTTCAGGTTCCCACAAGTCAGCATCAGCAACAATATGTTGGCTACAGCCAGGGTTACTCTCATATTCAGCATCCATCCCAATCGGTCACTCCTACATCCGCTCCTGGTAATTATGGCTATGAATTTACAGACCCTGCTCATTCCCAGATATACTATACTCAGCCTCTAGCACCTTCTCAGTACCAAGCCATGCCCGCAGCTGCTGTAATGCTGCCTGAAAATTCTGCTCAGCTTCCCACTGACAACATCAAGCAGCAGATGAGAACTTCACAACCATTATAGTCTGTTCAGAAAGAAGAAACAATTTTGGAATAAAGTATTTGGTTTTGCTTACAATTTTCTATTTTATTGTCTGTCTTGTTATTGGTATCTATTGGTTTGTGCATGTATCTGAGATAGAGATAATAAGTAATTGTTGTTGTCTTTTGGTTCGTGTGCCATATTATTTGTTTATTGTCATAGAAAATGAAAAAGTGGTCTGGAGATTATAGTTATACTGTAAAAGTTCTGAACTCAAACATGGTGTGCTTGTGCAGTCAATATGTGTTATAGAATTAGCAAGAGTTTTTGCATCAATCTCTTCTTCCCCTTACATTTATCATTTCTGCTGATTCAGATATTGTTGGTTTTTTGAATTATTTTTAATTTCTGTACAAAGTACTGGGCTCTTCTGCCACTCAATTGCTCATTGCATCCAGCAACTGGAATCACATCCGTACCAACTATGAGTTTTTCCATCAGTTATCTTCAACAAGAGATGATCCATTTCTGGCAGCTAGTTCCTTCACCTTGACGTTTCTGTCTGAATTCTTTTATTATACTCTGGTTACTTCTATTATTCTCTGATTGTGTTCATAGATTCATTGTTGCTGATCATTTTGCATCTCCTTTACTGAGAGTGGAACAAATCAAAATCGTTGGTTTCTTTTTTCAGAACGGATAGGTTTCTGAATCCTAG

mRNA sequence

TCAGCATTCTGCTCCCAAATTCCAACTCCACCCTTCCTCCGCCGCACGCCATGACGGAACCGCCGCCTCCGCCACCTGTTCAGCCGCTTCCGCCGGCGGTGTCGCCTCATCTCAACTATCCGGAGTCGTTGGACTCTTCTCCGAGGTCTCGCAACACCGACACGTGGGACGAGCCTCTTGCCCCCGCTGCCCTTGCCGGACGGCTCCGCCTCATGTGCAGCTACGGCGGCCATATAGTCCCTCGCCCTCACGATAAGACTCTGTGCTATGTCTGTGGTGAGACGCGGATCGTTGTTGTCGACCGCCATACCTCTTTATCTGACCTCAGTGCGCGTTTGTCGAAGACGCTTCTCAATGGTCGGCCGTTCACCCTGAAATATCAGCTTCCAAACGAGGATTTGGATTCTCTCATTTCTGTCACCACCGATGAGGATTTGGAGAATATGATTGACGAGTATGATCGGACGGCGAGTAATTCGTCTAACCCTGCGGCAAAACCCTCGCGACTTAGGTTGTTTCTGTTCCCCATTAAGCCGGATGTTTCTCAGTCGATCGGGCCAATTCTCGAGAGCTCGACTAGTTCTGATGACTGGTTTTTGAATGCTTTGAATGGTGCCGGTTTGCTCAATAGAGGTTTTTCGGACTCTGCATCGGTCAATTGCTTGTTAGGGCTTGATGATGATGTTGGTGTCAATAACCTCGATTCGGCTCCGAGGGAGGTAGAGGGTTCTCAGCCTGGTTCGTTTGGAAATGGTAAGGGTGGAAAACAGGATGTTCATTCTGTCCCTGATTCGCCGATGATCGAGACGACGTCGTCTTTTGGGTCTACCTCCTCTTCGCCTTCTCTGGCGAATTTGCCGCCGATTCGGGTTCATGTGGAGGATAGTGGCAATAGCGGTGGCGGTGGTATGGGTGCAGTTCGAGTTCAAGATCAGAAAGTGGGAATTGAGGAGCAATTTTCGCAGATGAGTGTTGGCGGTGGTGGTGTTGGGCAAAAGCAGCAAGAGGAAGCTTTCGCGGTACTCTCTTCGCCGCCTCCTTTGCCTACGACTATTGTGGCTACGGCGGCGGGCTCTGCAATTCCTGTGAGCTCGGCTGCCGGAGTAGGTGTAGGAGAATATTCGAATCGGGTGATCTCTGATGACGAGAGATCGGACCATGGGGCTCCGGTCGGATACCGGAAACCACTGCCACCACAACCACAGCCTCTTGCCCCCCAATTGCAGCAGAAATCAAGTGGACTTGTTGATATACCTTCCCCGGACTCAGTGTCAAGTGATAGTAGTATAAACAATCCGATGTCTCGCTCAAAACCTGTGATGTATCAAGAACAAGTTATTCATCAAATCCCCTCTTCAGCCACTAGGCTTCCTGGCAGTCCCGCAGATCCAAAAGTCAATATTTCTGATCAGAACACTCGGGTCCATATTCCACAACAGGTCCAAGAATCAGGATATGTGTTACAATCTCATTACGATCAGCATCAACAACAGCAACTTCAGCAACAACAGCAGCTTCAGCAACATCAGCAACTTCAGCAACAGCAGCAACTTCAGCAGCAACAACAACAGCAGCAACAGCAACACCCACCTCAACCACAGCAATTCATACATGCAGGCGCTCACTACATCCAACAGCACCCATCTGGTGCAGTGCCTATTCCAGCATTTTTCCCTGTGTATTCTCCTCAGCACCATCATCATCCCCATCAGATGGAGCAGCAGTATCCAGTCTACTACCTGCCTGCTAGACAGGCCCAAGCTTATGGCAATTTGCCAGTTCAGCAATCTAGTGAGGCTGCCACTGCTATTCCTCCTGGTCGGCCCCAAACCCCTCCTAATCCAACTTTGGTCACAACTGCAGGTTACAACCCCATGAGGAATGCCCCTATTGCAAAAACTGAAATGGCTGCCAATGCATTCAAACAGACAACTACACCTGCTCAGTCTTTAGTTCAGGTTCCCACAAGTCAGCATCAGCAACAATATGTTGGCTACAGCCAGGGTTACTCTCATATTCAGCATCCATCCCAATCGGTCACTCCTACATCCGCTCCTGGTAATTATGGCTATGAATTTACAGACCCTGCTCATTCCCAGATATACTATACTCAGCCTCTAGCACCTTCTCAGTACCAAGCCATGCCCGCAGCTGCTGTAATGCTGCCTGAAAATTCTGCTCAGCTTCCCACTGACAACATCAAGCAGCAGATGAGAACTTCACAACCATTATAGTCTGTTCAGAAAGAAGAAACAATTTTGGAATAAAGTATTTGGTTTTGCTTACAATTTTCTATTTTATTGTCTGTCTTGTTATTGGTATCTATTGGTTTGTGCATGTATCTGAGATAGAGATAATAAGTAATTGTTGTTGTCTTTTGGTTCGTGTGCCATATTATTTGTTTATTGTCATAGAAAATGAAAAAGTGGTCTGGAGATTATAGTTATACTGTAAAAGTTCTGAACTCAAACATGGTGTGCTTGTGCAGTCAATATGTGTTATAGAATTAGCAAGAGTTTTTGCATCAATCTCTTCTTCCCCTTACATTTATCATTTCTGCTGATTCAGATATTGTTGGTTTTTTGAATTATTTTTAATTTCTGTACAAAGTACTGGGCTCTTCTGCCACTCAATTGCTCATTGCATCCAGCAACTGGAATCACATCCGTACCAACTATGAGTTTTTCCATCAGTTATCTTCAACAAGAGATGATCCATTTCTGGCAGCTAGTTCCTTCACCTTGACGTTTCTGTCTGAATTCTTTTATTATACTCTGGTTACTTCTATTATTCTCTGATTGTGTTCATAGATTCATTGTTGCTGATCATTTTGCATCTCCTTTACTGAGAGTGGAACAAATCAAAATCGTTGGTTTCTTTTTTCAGAACGGATAGGTTTCTGAATCCTAG

Coding sequence (CDS)

ATGACGGAACCGCCGCCTCCGCCACCTGTTCAGCCGCTTCCGCCGGCGGTGTCGCCTCATCTCAACTATCCGGAGTCGTTGGACTCTTCTCCGAGGTCTCGCAACACCGACACGTGGGACGAGCCTCTTGCCCCCGCTGCCCTTGCCGGACGGCTCCGCCTCATGTGCAGCTACGGCGGCCATATAGTCCCTCGCCCTCACGATAAGACTCTGTGCTATGTCTGTGGTGAGACGCGGATCGTTGTTGTCGACCGCCATACCTCTTTATCTGACCTCAGTGCGCGTTTGTCGAAGACGCTTCTCAATGGTCGGCCGTTCACCCTGAAATATCAGCTTCCAAACGAGGATTTGGATTCTCTCATTTCTGTCACCACCGATGAGGATTTGGAGAATATGATTGACGAGTATGATCGGACGGCGAGTAATTCGTCTAACCCTGCGGCAAAACCCTCGCGACTTAGGTTGTTTCTGTTCCCCATTAAGCCGGATGTTTCTCAGTCGATCGGGCCAATTCTCGAGAGCTCGACTAGTTCTGATGACTGGTTTTTGAATGCTTTGAATGGTGCCGGTTTGCTCAATAGAGGTTTTTCGGACTCTGCATCGGTCAATTGCTTGTTAGGGCTTGATGATGATGTTGGTGTCAATAACCTCGATTCGGCTCCGAGGGAGGTAGAGGGTTCTCAGCCTGGTTCGTTTGGAAATGGTAAGGGTGGAAAACAGGATGTTCATTCTGTCCCTGATTCGCCGATGATCGAGACGACGTCGTCTTTTGGGTCTACCTCCTCTTCGCCTTCTCTGGCGAATTTGCCGCCGATTCGGGTTCATGTGGAGGATAGTGGCAATAGCGGTGGCGGTGGTATGGGTGCAGTTCGAGTTCAAGATCAGAAAGTGGGAATTGAGGAGCAATTTTCGCAGATGAGTGTTGGCGGTGGTGGTGTTGGGCAAAAGCAGCAAGAGGAAGCTTTCGCGGTACTCTCTTCGCCGCCTCCTTTGCCTACGACTATTGTGGCTACGGCGGCGGGCTCTGCAATTCCTGTGAGCTCGGCTGCCGGAGTAGGTGTAGGAGAATATTCGAATCGGGTGATCTCTGATGACGAGAGATCGGACCATGGGGCTCCGGTCGGATACCGGAAACCACTGCCACCACAACCACAGCCTCTTGCCCCCCAATTGCAGCAGAAATCAAGTGGACTTGTTGATATACCTTCCCCGGACTCAGTGTCAAGTGATAGTAGTATAAACAATCCGATGTCTCGCTCAAAACCTGTGATGTATCAAGAACAAGTTATTCATCAAATCCCCTCTTCAGCCACTAGGCTTCCTGGCAGTCCCGCAGATCCAAAAGTCAATATTTCTGATCAGAACACTCGGGTCCATATTCCACAACAGGTCCAAGAATCAGGATATGTGTTACAATCTCATTACGATCAGCATCAACAACAGCAACTTCAGCAACAACAGCAGCTTCAGCAACATCAGCAACTTCAGCAACAGCAGCAACTTCAGCAGCAACAACAACAGCAGCAACAGCAACACCCACCTCAACCACAGCAATTCATACATGCAGGCGCTCACTACATCCAACAGCACCCATCTGGTGCAGTGCCTATTCCAGCATTTTTCCCTGTGTATTCTCCTCAGCACCATCATCATCCCCATCAGATGGAGCAGCAGTATCCAGTCTACTACCTGCCTGCTAGACAGGCCCAAGCTTATGGCAATTTGCCAGTTCAGCAATCTAGTGAGGCTGCCACTGCTATTCCTCCTGGTCGGCCCCAAACCCCTCCTAATCCAACTTTGGTCACAACTGCAGGTTACAACCCCATGAGGAATGCCCCTATTGCAAAAACTGAAATGGCTGCCAATGCATTCAAACAGACAACTACACCTGCTCAGTCTTTAGTTCAGGTTCCCACAAGTCAGCATCAGCAACAATATGTTGGCTACAGCCAGGGTTACTCTCATATTCAGCATCCATCCCAATCGGTCACTCCTACATCCGCTCCTGGTAATTATGGCTATGAATTTACAGACCCTGCTCATTCCCAGATATACTATACTCAGCCTCTAGCACCTTCTCAGTACCAAGCCATGCCCGCAGCTGCTGTAATGCTGCCTGAAAATTCTGCTCAGCTTCCCACTGACAACATCAAGCAGCAGATGAGAACTTCACAACCATTATAG

Protein sequence

MTEPPPPPPVQPLPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPAALAGRLRLMCSYGGHIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLSARLSKTLLNGRPFTLKYQLPNEDLDSLISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDDWFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSAPREVEGSQPGSFGNGKGGKQDVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNSGGGGMGAVRVQDQKVGIEEQFSQMSVGGGGVGQKQQEEAFAVLSSPPPLPTTIVATAAGSAIPVSSAAGVGVGEYSNRVISDDERSDHGAPVGYRKPLPPQPQPLAPQLQQKSSGLVDIPSPDSVSSDSSINNPMSRSKPVMYQEQVIHQIPSSATRLPGSPADPKVNISDQNTRVHIPQQVQESGYVLQSHYDQHQQQQLQQQQQLQQHQQLQQQQQLQQQQQQQQQQHPPQPQQFIHAGAHYIQQHPSGAVPIPAFFPVYSPQHHHHPHQMEQQYPVYYLPARQAQAYGNLPVQQSSEAATAIPPGRPQTPPNPTLVTTAGYNPMRNAPIAKTEMAANAFKQTTTPAQSLVQVPTSQHQQQYVGYSQGYSHIQHPSQSVTPTSAPGNYGYEFTDPAHSQIYYTQPLAPSQYQAMPAAAVMLPENSAQLPTDNIKQQMRTSQPL

Homology

[Close]

BLAST of Lcy13g004960 vs. ExPASy TrEMBL
Match: A0A0A0KWH3 (PB1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G610450 PE=4 SV=1)

HSP 1 Score: 1227.6 bits (3175), Expect = 0.0e+00
Identity = 652/729 (89.44%), Postives = 666/729 (91.36%), Query Frame = 0


Query: 1   MTEPPPPPPVQPLPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPAALAGRLRLMCSYGG 60
           MTEPPP P  QP+ PAVSPHLNYPESLDSSPRSRNTDTWDEPLAP  LA RLRLMCSYGG
Sbjct: 1   MTEPPPLPITQPITPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLASRLRLMCSYGG 60

Query: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLSARLSKTLLNGRPFTLKYQLPNEDLDSL 120
           HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDL+ARLSKTLLNGRPFTLKYQLPNEDLDSL
Sbjct: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120

Query: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180
           ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180

Query: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSAPREVEGSQPGSFGNGKGGKQ 240
           WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDS PRE +GSQPGSFGNGKGGKQ
Sbjct: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 240

Query: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNSGGGGMGAVRVQDQKVGIE 300
           DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGN+GG G G VRVQDQKVGIE
Sbjct: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGGVGAGVVRVQDQKVGIE 300

Query: 301 EQFSQMSVGGGGVGQKQQEEAFAVLSSPPPLPTTIVATAAGSAIPVSSAAGVGVGEYSNR 360
           EQFSQMS     VGQKQ +EAFA LSSPPPLPTTIVA+AAGSAIPVSSAAGV VGEY+NR
Sbjct: 301 EQFSQMS-----VGQKQHDEAFAALSSPPPLPTTIVASAAGSAIPVSSAAGVVVGEYTNR 360

Query: 361 VISDDERSDHGAPVGYRKPLPPQPQPLAPQLQQKSSGLVDIPSPDSVSSDSSINNPMSRS 420
           VISDDERSDHGAPVGYRKPLPPQPQ L PQLQQKSSGLVDIPSPDSVSSDSS+NNPMSRS
Sbjct: 361 VISDDERSDHGAPVGYRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRS 420

Query: 421 KPVMYQEQVIHQIPSSATRLPGSPADPKVNISDQNTRVHIPQQVQESGYVLQSHYDQHQQ 480
           KPVMYQEQV+HQIPSSA RLPGSPADPKVN  DQN RVHI QQVQE GYVL S YDQHQ 
Sbjct: 421 KPVMYQEQVVHQIPSSAVRLPGSPADPKVNFPDQNARVHIQQQVQEPGYVLHSQYDQHQH 480

Query: 481 QQLQQQQQLQQHQQLQQQQQLQQQQQQQQQQHPPQPQQFIHAGAHYIQQHPSGAVPIPAF 540
           QQLQQ                QQ QQQQ QQHPPQPQQFIHAGAHYI QHPSGAV IPAF
Sbjct: 481 QQLQQ----------------QQPQQQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAF 540

Query: 541 FPVYSPQHHHHPHQMEQQYPVYYLPARQAQAYGNLPVQQS--SEAATAIPPGRPQTPPNP 600
           FPVYSPQHHHHPHQ+EQQYPVYYLPARQ QAYGNLPVQQS  SE+ATAIPPGRPQTPPNP
Sbjct: 541 FPVYSPQHHHHPHQIEQQYPVYYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNP 600

Query: 601 TLVTTAGYNPMRNAPIAKTEMAANAFKQTTTPAQSLVQVPTSQHQQQYVGYSQGYSHIQH 660
           TLVTTA YN MRN PIAKTEMAANAFKQTTT  QSLVQVPT+QHQQQYVGY+QGYSHIQH
Sbjct: 601 TLVTTAAYNHMRNPPIAKTEMAANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQH 660

Query: 661 PSQSVTPTSAPGNYGYEFTDPAHSQIYYTQPLAPSQYQAMPAAAVMLPENSAQLPTDNIK 720
           PSQSVTPTSA  NY YEF+DPAHSQIYYTQPL PSQYQAMPAAAVMLPENSAQLPTDNIK
Sbjct: 661 PSQSVTPTSATANYAYEFSDPAHSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIK 708

Query: 721 QQMRTSQPL 728
           QQMRTSQPL
Sbjct: 721 QQMRTSQPL 708

[Close]

BLAST of Lcy13g004960 vs. ExPASy TrEMBL
Match: A0A5A7SVC4 (RNA polymerase II degradation factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001310 PE=4 SV=1)

HSP 1 Score: 1219.1 bits (3153), Expect = 0.0e+00
Identity = 647/729 (88.75%), Postives = 664/729 (91.08%), Query Frame = 0


Query: 1   MTEPPPPPPVQPLPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPAALAGRLRLMCSYGG 60
           MTEPPPPPP Q +PPAVSPHLNYPESLDSSPRSRNTDTWDEPLAP  LA RLRLMCSYGG
Sbjct: 1   MTEPPPPPPTQTIPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLASRLRLMCSYGG 60

Query: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLSARLSKTLLNGRPFTLKYQLPNEDLDSL 120
           HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDL+ARLSKTLLNGRPFTLKYQLPNEDLDSL
Sbjct: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120

Query: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180
           ISVTTDEDLENMIDEYDRTASNSSNP+AKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSNPSAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180

Query: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSAPREVEGSQPGSFGNGKGGKQ 240
           WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDS PRE +GSQPGSFGNGKGGKQ
Sbjct: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 240

Query: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNSGGGGMGAVRVQDQKVGIE 300
           DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGN+G  G G VRVQDQK+GIE
Sbjct: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGAVGAGVVRVQDQKLGIE 300

Query: 301 EQFSQMSVGGGGVGQKQQEEAFAVLSSPPPLPTTIVATAAGSAIPVSSAAGVGVGEYSNR 360
           EQFSQMS     VGQKQQ+EAF  LSSPPPLPTTIV +AAGSAIPVSSAAG+ VGEY+NR
Sbjct: 301 EQFSQMS-----VGQKQQDEAFTALSSPPPLPTTIVVSAAGSAIPVSSAAGLVVGEYTNR 360

Query: 361 VISDDERSDHGAPVGYRKPLPPQPQPLAPQLQQKSSGLVDIPSPDSVSSDSSINNPMSRS 420
           VISDDERSDHGAPVG+RKPLPPQPQ L PQLQQKSSGLVDIPSPDSVSSDSS+NNPMSRS
Sbjct: 361 VISDDERSDHGAPVGHRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRS 420

Query: 421 KPVMYQEQVIHQIPSSATRLPGSPADPKVNISDQNTRVHIPQQVQESGYVLQSHYDQHQQ 480
           KPVMYQEQV HQIPSSA RLPGSPADPKVN  DQN RVHI QQVQESGYVL S YDQHQ 
Sbjct: 421 KPVMYQEQV-HQIPSSAVRLPGSPADPKVNFPDQNARVHIQQQVQESGYVLHSQYDQHQH 480

Query: 481 QQLQQQQQLQQHQQLQQQQQLQQQQQQQQQQHPPQPQQFIHAGAHYIQQHPSGAVPIPAF 540
           QQLQ                 QQQ QQQ QQHPPQPQQFIHAGAHYI QHPSGAV IPAF
Sbjct: 481 QQLQ-----------------QQQPQQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAF 540

Query: 541 FPVYSPQHHHHPHQMEQQYPVYYLPARQAQAYGNLPVQQS--SEAATAIPPGRPQTPPNP 600
           FPVYSPQHHHHPHQ+EQQYPVYYLPARQ QAYGNLPVQQS  SE+ATAIPPGRPQTPPNP
Sbjct: 541 FPVYSPQHHHHPHQIEQQYPVYYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNP 600

Query: 601 TLVTTAGYNPMRNAPIAKTEMAANAFKQTTTPAQSLVQVPTSQHQQQYVGYSQGYSHIQH 660
           TLVTTA YN MRN PIAKTEMAANAFKQTTT  QSLVQVPT+QHQQQYVGY+QGYSHIQH
Sbjct: 601 TLVTTAAYNHMRNPPIAKTEMAANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQH 660

Query: 661 PSQSVTPTSAPGNYGYEFTDPAHSQIYYTQPLAPSQYQAMPAAAVMLPENSAQLPTDNIK 720
           PSQSV PTSA  NY YEF+DPAHSQIYYTQPL PSQYQAMPAAAVMLPENSAQLPTDNIK
Sbjct: 661 PSQSVPPTSATANYAYEFSDPAHSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIK 706

Query: 721 QQMRTSQPL 728
           QQMRTSQPL
Sbjct: 721 QQMRTSQPL 706

[Close]

BLAST of Lcy13g004960 vs. ExPASy TrEMBL
Match: A0A1S3BF26 (RNA polymerase II degradation factor 1 OS=Cucumis melo OX=3656 GN=LOC103489312 PE=4 SV=1)

HSP 1 Score: 1219.1 bits (3153), Expect = 0.0e+00
Identity = 647/729 (88.75%), Postives = 664/729 (91.08%), Query Frame = 0


Query: 1   MTEPPPPPPVQPLPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPAALAGRLRLMCSYGG 60
           MTEPPPPPP Q +PPAVSPHLNYPESLDSSPRSRNTDTWDEPLAP  LA RLRLMCSYGG
Sbjct: 1   MTEPPPPPPTQTIPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLASRLRLMCSYGG 60

Query: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLSARLSKTLLNGRPFTLKYQLPNEDLDSL 120
           HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDL+ARLSKTLLNGRPFTLKYQLPNEDLDSL
Sbjct: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120

Query: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180
           ISVTTDEDLENMIDEYDRTASNSSNP+AKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSNPSAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180

Query: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSAPREVEGSQPGSFGNGKGGKQ 240
           WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDS PRE +GSQPGSFGNGKGGKQ
Sbjct: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 240

Query: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNSGGGGMGAVRVQDQKVGIE 300
           DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGN+G  G G VRVQDQK+GIE
Sbjct: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGAVGAGVVRVQDQKLGIE 300

Query: 301 EQFSQMSVGGGGVGQKQQEEAFAVLSSPPPLPTTIVATAAGSAIPVSSAAGVGVGEYSNR 360
           EQFSQMS     VGQKQQ+EAF  LSSPPPLPTTIV +AAGSAIPVSSAAG+ VGEY+NR
Sbjct: 301 EQFSQMS-----VGQKQQDEAFTALSSPPPLPTTIVVSAAGSAIPVSSAAGLVVGEYTNR 360

Query: 361 VISDDERSDHGAPVGYRKPLPPQPQPLAPQLQQKSSGLVDIPSPDSVSSDSSINNPMSRS 420
           VISDDERSDHGAPVG+RKPLPPQPQ L PQLQQKSSGLVDIPSPDSVSSDSS+NNPMSRS
Sbjct: 361 VISDDERSDHGAPVGHRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRS 420

Query: 421 KPVMYQEQVIHQIPSSATRLPGSPADPKVNISDQNTRVHIPQQVQESGYVLQSHYDQHQQ 480
           KPVMYQEQV HQIPSSA RLPGSPADPKVN  DQN RVHI QQVQESGYVL S YDQHQ 
Sbjct: 421 KPVMYQEQV-HQIPSSAVRLPGSPADPKVNFPDQNARVHIQQQVQESGYVLHSQYDQHQH 480

Query: 481 QQLQQQQQLQQHQQLQQQQQLQQQQQQQQQQHPPQPQQFIHAGAHYIQQHPSGAVPIPAF 540
           QQLQ                 QQQ QQQ QQHPPQPQQFIHAGAHYI QHPSGAV IPAF
Sbjct: 481 QQLQ-----------------QQQPQQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAF 540

Query: 541 FPVYSPQHHHHPHQMEQQYPVYYLPARQAQAYGNLPVQQS--SEAATAIPPGRPQTPPNP 600
           FPVYSPQHHHHPHQ+EQQYPVYYLPARQ QAYGNLPVQQS  SE+ATAIPPGRPQTPPNP
Sbjct: 541 FPVYSPQHHHHPHQIEQQYPVYYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNP 600

Query: 601 TLVTTAGYNPMRNAPIAKTEMAANAFKQTTTPAQSLVQVPTSQHQQQYVGYSQGYSHIQH 660
           TLVTTA YN MRN PIAKTEMAANAFKQTTT  QSLVQVPT+QHQQQYVGY+QGYSHIQH
Sbjct: 601 TLVTTAAYNHMRNPPIAKTEMAANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQH 660

Query: 661 PSQSVTPTSAPGNYGYEFTDPAHSQIYYTQPLAPSQYQAMPAAAVMLPENSAQLPTDNIK 720
           PSQSV PTSA  NY YEF+DPAHSQIYYTQPL PSQYQAMPAAAVMLPENSAQLPTDNIK
Sbjct: 661 PSQSVPPTSATANYAYEFSDPAHSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIK 706

Query: 721 QQMRTSQPL 728
           QQMRTSQPL
Sbjct: 721 QQMRTSQPL 706

[Close]

BLAST of Lcy13g004960 vs. ExPASy TrEMBL
Match: A0A6J1FZM0 (negative elongation factor A-like OS=Cucurbita moschata OX=3662 GN=LOC111449378 PE=4 SV=1)

HSP 1 Score: 1214.1 bits (3140), Expect = 0.0e+00
Identity = 648/730 (88.77%), Postives = 671/730 (91.92%), Query Frame = 0


Query: 1   MTEPPPPPPVQPLPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPAALAGRLRLMCSYGG 60
           MTEP PPPP QPLP AV+PHLNYPES+DSSPRSRN DTWDEPLAPAALA RLR MCSYGG
Sbjct: 1   MTEPLPPPPTQPLPSAVAPHLNYPESVDSSPRSRNADTWDEPLAPAALASRLRFMCSYGG 60

Query: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLSARLSKTLLNGRPFTLKYQLPNEDLDSL 120
           HIVPRPHDKTLCYV GETRIVVVDRHTSLSDL+ARLSKTLLNGRPFTLKYQLPNEDLDSL
Sbjct: 61  HIVPRPHDKTLCYVSGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120

Query: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180
           ISVTTDEDLENMIDEYDRTASNSSN AAKPSRLRLFLFPI+PDVSQSIGPILESSTSSDD
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSNSAAKPSRLRLFLFPIQPDVSQSIGPILESSTSSDD 180

Query: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSAPREVEGSQPGSFGNGKGGKQ 240
           WFLNALNGAGLLNRGFSD+ASVNCLLGLDDDVGVNNLDS  RE EGSQPGSFGNGKGGKQ
Sbjct: 181 WFLNALNGAGLLNRGFSDTASVNCLLGLDDDVGVNNLDSGTREAEGSQPGSFGNGKGGKQ 240

Query: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNSGGGGMGAVRVQDQKVGIE 300
           DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVH+ED+GNSGGGG+GAVRVQDQKVGIE
Sbjct: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHLEDTGNSGGGGVGAVRVQDQKVGIE 300

Query: 301 EQFSQMSVGGGGVGQKQQEEAFAVLSSPPPLPTTIVATAAGSAIPVSSAAGVGVGEYSNR 360
           EQFSQMSV  GGVGQKQQEE FAVLSSPPPLPTTIVATAAGSAIPVS+A GVGVGEYSNR
Sbjct: 301 EQFSQMSV--GGVGQKQQEEVFAVLSSPPPLPTTIVATAAGSAIPVSAAVGVGVGEYSNR 360

Query: 361 VISDDERSDHGAPVGYRKPLPPQPQPLAPQLQQKSSGLVDIPSPDSVSSDSSINNPMSRS 420
            ISDDERSDHG PVGYRKPLPPQPQ L PQLQQKSSGLVDIPSPDS+SSDSSINNPMSRS
Sbjct: 361 AISDDERSDHGVPVGYRKPLPPQPQSLIPQLQQKSSGLVDIPSPDSMSSDSSINNPMSRS 420

Query: 421 KPVMYQEQVIHQIPSSATRLPGSPADPKVNISDQNTRVHIPQQVQESGYVLQSHYDQHQQ 480
            PVMYQEQV HQIPSSA R+PGSPADPK NIS+QNTRVHIPQQVQE+GYVLQSHYDQH  
Sbjct: 421 VPVMYQEQV-HQIPSSAVRIPGSPADPKANISEQNTRVHIPQQVQEAGYVLQSHYDQH-- 480

Query: 481 QQLQQQQQLQQHQQLQQQQQLQQQQQQQQQQHPPQPQQFIHAGAHYIQQHPSGAVPIPAF 540
                        QLQQQ    QQQ QQQQQHPPQPQQFIHAGAHYIQQHPSGA+P+PAF
Sbjct: 481 -------------QLQQQ---LQQQLQQQQQHPPQPQQFIHAGAHYIQQHPSGAMPMPAF 540

Query: 541 FPVYSPQHHHHPHQMEQQYPVYYLPARQAQAYGNLPVQQS--SEAATAIPPGRPQTPPNP 600
           FPVYSPQH H PH+ME QYPVYYLPARQAQAYGNLPVQQS  SEA  AIPPG+PQTP NP
Sbjct: 541 FPVYSPQHPHLPHRMEHQYPVYYLPARQAQAYGNLPVQQSTMSEAVAAIPPGQPQTPTNP 600

Query: 601 TLVTTAGYNPMRNAPIAKTEMAANAFKQTTTPAQSLVQVPTSQHQQQYVGYSQGYSHIQH 660
           T VTTA +NPMRNAPIAKTE+ ANA+KQTTTPAQSLVQVPTSQHQQQYVGY+QGYSHIQH
Sbjct: 601 TRVTTAAFNPMRNAPIAKTEVVANAYKQTTTPAQSLVQVPTSQHQQQYVGYNQGYSHIQH 660

Query: 661 PSQSVTPTSAPGNYGYEFTDPAHSQIYYTQPLA-PSQYQAMPAAAVMLPENSAQLPTDNI 720
           PSQSVTPTSAP NY YEF +PAHSQIYYTQPLA PSQYQAMPA AVMLPENSAQLPTDN+
Sbjct: 661 PSQSVTPTSAPANYAYEFPEPAHSQIYYTQPLAPPSQYQAMPAPAVMLPENSAQLPTDNM 709

Query: 721 KQQMRTSQPL 728
           KQQMRTSQPL
Sbjct: 721 KQQMRTSQPL 709

[Close]

BLAST of Lcy13g004960 vs. ExPASy TrEMBL
Match: A0A6J1HQW4 (RNA polymerase II degradation factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111465567 PE=4 SV=1)

HSP 1 Score: 1204.5 bits (3115), Expect = 0.0e+00
Identity = 651/744 (87.50%), Postives = 673/744 (90.46%), Query Frame = 0


Query: 1   MTEPPPPPPVQPLPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPAALAGRLRLMCSYGG 60
           M EPPP    QPLP A SP LNYPESLDSSPRSRNTDTWDEPLAP  LAGRLRLMCSYGG
Sbjct: 1   MMEPPPLTTAQPLPTAASPQLNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG 60

Query: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLSARLSKTLLNGRPFTLKYQLPNEDLDSL 120
           HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDL+ARLSKTLLNGR FTLKYQLPNEDLDSL
Sbjct: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRSFTLKYQLPNEDLDSL 120

Query: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180
           ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFP KPDVSQSIGPILESSTSS+D
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPTKPDVSQSIGPILESSTSSED 180

Query: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSAPREVEGSQPGSFGNGKGGKQ 240
           WFLNALNGAG LNRGFSDSASVNCLLGLDDDVGVNNLDS PRE +GSQPGS GNGK GKQ
Sbjct: 181 WFLNALNGAGFLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSLGNGKSGKQ 240

Query: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNSGGGGMGAVRVQDQKVGIE 300
           D+HSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDS NSGGGG GAVR+QDQKVGIE
Sbjct: 241 DIHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSVNSGGGGAGAVRIQDQKVGIE 300

Query: 301 EQFSQMSVGGGGVGQKQQEEAFAVLSSPPPLPTTIVATAAGSAIPVSSAAGVGVGEYSNR 360
           EQFSQM      +GQK Q+EAF  LSSPPPLPTTIVA+AAGSAIPVS AA VGVG+Y NR
Sbjct: 301 EQFSQMI-----IGQKLQDEAFTALSSPPPLPTTIVASAAGSAIPVSLAAAVGVGDYMNR 360

Query: 361 VISDDERSDHGAPVGYRKPLPPQPQPLAPQLQQKSSGLVDIPSPDSVSSDSSINNPMSRS 420
           VISDDERSDHGAPVGYR+PLPPQPQ L PQLQQKSSGLVDIPSPDSVSSD+S+NN MSRS
Sbjct: 361 VISDDERSDHGAPVGYRQPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDTSLNNQMSRS 420

Query: 421 KPVMYQEQVIHQIPSSATRLPGSPADPKVNISDQNTRVHIPQQVQESGYVLQSHYDQH-- 480
           KPVMYQEQV+HQIPSS  RLPG+P+DP+VNISDQN RVHIPQQVQESGYVLQSHYDQH  
Sbjct: 421 KPVMYQEQVVHQIPSSTARLPGNPSDPEVNISDQNARVHIPQQVQESGYVLQSHYDQHQH 480

Query: 481 -------QQQQLQQQQQLQ------QHQQLQQQQQLQQQQQQQQQQHPPQPQQFIHAGAH 540
                  QQQQLQQQQQLQ      Q QQLQQQQQ QQQQQQQQQQHP QPQQFIHAGAH
Sbjct: 481 QQLQQLQQQQQLQQQQQLQQQHQQHQQQQLQQQQQQQQQQQQQQQQHPSQPQQFIHAGAH 540

Query: 541 YIQQHPSGAVPIPAFFPVYSPQHHHHPHQMEQQYPVYYLPARQAQAYGNLPVQQS--SEA 600
           YI QHPSGAVPIPAFFPVYSPQ HHHPHQMEQQYPVYYLPARQ QAYGNLPVQQS  SE+
Sbjct: 541 YIHQHPSGAVPIPAFFPVYSPQPHHHPHQMEQQYPVYYLPARQGQAYGNLPVQQSSISES 600

Query: 601 ATAIPPGRPQTPPNPTLVTTAGYNPMRNAPIAKTEMAANAFKQTTTPAQSLVQVPTSQHQ 660
           ATAIPPGRPQTPPNPTLVTTA YN  RNAPIAKTEMAA A+KQTTT AQSLVQVPT+QHQ
Sbjct: 601 ATAIPPGRPQTPPNPTLVTTAAYNHARNAPIAKTEMAAKAYKQTTTAAQSLVQVPTNQHQ 660

Query: 661 QQYVGYSQGYSHIQHPSQSVTPTSAPGNYGYEFTDPAHSQIYYTQPLAPSQYQAMPAAAV 720
           QQYV Y+QGYSHIQHPSQSV PTSA  NY YEF+DPAHSQIYYTQPLAPSQYQAMPAAAV
Sbjct: 661 QQYVAYNQGYSHIQHPSQSVAPTSATANYAYEFSDPAHSQIYYTQPLAPSQYQAMPAAAV 720

Query: 721 MLPENSAQLPTDNIKQQMRTSQPL 728
           MLPE+SAQ PTDNIKQQMRTSQPL
Sbjct: 721 MLPESSAQHPTDNIKQQMRTSQPL 739

[Close]

BLAST of Lcy13g004960 vs. NCBI nr
Match: XP_038892018.1 (putative mediator of RNA polymerase II transcription subunit 12 [Benincasa hispida])

HSP 1 Score: 1246.5 bits (3224), Expect = 0.0e+00
Identity = 660/730 (90.41%), Postives = 676/730 (92.60%), Query Frame = 0


Query: 1   MTEPPPPPPVQPLPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPAALAGRLRLMCSYGG 60
           MTEPPPPPP QPLPP VSPHLNYPESLDSSPRSRNTDTWDEPLAP  LAGRLRLMCSYGG
Sbjct: 1   MTEPPPPPPTQPLPPVVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG 60

Query: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLSARLSKTLLNGRPFTLKYQLPNEDLDSL 120
           HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDL+ARLSKTLLNGRPFTLKYQLPNEDLDSL
Sbjct: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120

Query: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180
           ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSS+D
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSED 180

Query: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSAPREVEGSQPGSFGNGKGGKQ 240
           WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDS PRE +GSQPGSFGNGKGGKQ
Sbjct: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 240

Query: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNSGGGGMGAVRVQDQKVGIE 300
           DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNSGG   GAVRVQDQKVGIE
Sbjct: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNSGGVAAGAVRVQDQKVGIE 300

Query: 301 EQFSQMSVGGGGVGQKQQEEAFAVLSSPPPLPTTIVAT-AAGSAIPVSSAAGVGVGEYSN 360
           EQFSQMS     VGQKQQ+EAF  LSSPPPLPTTIVA+ AAGSAIPV SAAGVGVGEY+N
Sbjct: 301 EQFSQMS-----VGQKQQDEAFTALSSPPPLPTTIVASAAAGSAIPVCSAAGVGVGEYTN 360

Query: 361 RVISDDERSDHGAPVGYRKPLPPQPQPLAPQLQQKSSGLVDIPSPDSVSSDSSINNPMSR 420
           RVISDDERSDHGAPVGYRKPLPPQPQ LAPQLQQKSSGLVDIPSPDSVSSDSS+NNPMSR
Sbjct: 361 RVISDDERSDHGAPVGYRKPLPPQPQSLAPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSR 420

Query: 421 SKPVMYQEQVIHQIPSSATRLPGSPADPKVNISDQNTRVHIPQQVQESGYVLQSHYDQHQ 480
           SKPVMYQEQV+HQIP+SA RLPGSPADPKVN+SDQN RVHIPQQVQESGYVL S YDQHQ
Sbjct: 421 SKPVMYQEQVVHQIPTSAVRLPGSPADPKVNVSDQNARVHIPQQVQESGYVLHSQYDQHQ 480

Query: 481 QQQLQQQQQLQQHQQLQQQQQLQQQQQQQQQQHPPQPQQFIHAGAHYIQQHPSGAVPIPA 540
            QQLQQQQ              QQQQQ Q QQHPPQPQQFIHAGAHYI QHPSGAV IPA
Sbjct: 481 HQQLQQQQ--------------QQQQQPQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPA 540

Query: 541 FFPVYSPQHHHHPHQMEQQYPVYYLPARQAQAYGNLPVQQS--SEAATAIPPGRPQTPPN 600
           FFPVYSPQHHHHPHQMEQQYPVYYLPARQ QAYGNLPVQQS  SE+ATAIPPGRPQTPPN
Sbjct: 541 FFPVYSPQHHHHPHQMEQQYPVYYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPN 600

Query: 601 PTLVTTAGYNPMRNAPIAKTEMAANAFKQTTTPAQSLVQVPTSQHQQQYVGYSQGYSHIQ 660
           PTLVTTA YN MRNAPIAKTEM+ANA+KQTTT  QSLVQVP SQHQQQYVGY+QGYSHIQ
Sbjct: 601 PTLVTTAAYNHMRNAPIAKTEMSANAYKQTTTTPQSLVQVPASQHQQQYVGYNQGYSHIQ 660

Query: 661 HPSQSVTPTSAPGNYGYEFTDPAHSQIYYTQPLAPSQYQAMPAAAVMLPENSAQLPTDNI 720
           HPSQSV PTSA  NY YEF+DPAHSQIYYTQPLAPSQYQAMPAAAVMLPENSAQLPTDN+
Sbjct: 661 HPSQSVAPTSATANYAYEFSDPAHSQIYYTQPLAPSQYQAMPAAAVMLPENSAQLPTDNM 711

Query: 721 KQQMRTSQPL 728
           KQQMRTSQPL
Sbjct: 721 KQQMRTSQPL 711

[Close]

BLAST of Lcy13g004960 vs. NCBI nr
Match: XP_004135079.1 (RNA polymerase II degradation factor 1 [Cucumis sativus] >KGN52111.1 hypothetical protein Csa_009068 [Cucumis sativus])

HSP 1 Score: 1227.6 bits (3175), Expect = 0.0e+00
Identity = 652/729 (89.44%), Postives = 666/729 (91.36%), Query Frame = 0


Query: 1   MTEPPPPPPVQPLPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPAALAGRLRLMCSYGG 60
           MTEPPP P  QP+ PAVSPHLNYPESLDSSPRSRNTDTWDEPLAP  LA RLRLMCSYGG
Sbjct: 1   MTEPPPLPITQPITPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLASRLRLMCSYGG 60

Query: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLSARLSKTLLNGRPFTLKYQLPNEDLDSL 120
           HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDL+ARLSKTLLNGRPFTLKYQLPNEDLDSL
Sbjct: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120

Query: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180
           ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180

Query: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSAPREVEGSQPGSFGNGKGGKQ 240
           WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDS PRE +GSQPGSFGNGKGGKQ
Sbjct: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 240

Query: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNSGGGGMGAVRVQDQKVGIE 300
           DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGN+GG G G VRVQDQKVGIE
Sbjct: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGGVGAGVVRVQDQKVGIE 300

Query: 301 EQFSQMSVGGGGVGQKQQEEAFAVLSSPPPLPTTIVATAAGSAIPVSSAAGVGVGEYSNR 360
           EQFSQMS     VGQKQ +EAFA LSSPPPLPTTIVA+AAGSAIPVSSAAGV VGEY+NR
Sbjct: 301 EQFSQMS-----VGQKQHDEAFAALSSPPPLPTTIVASAAGSAIPVSSAAGVVVGEYTNR 360

Query: 361 VISDDERSDHGAPVGYRKPLPPQPQPLAPQLQQKSSGLVDIPSPDSVSSDSSINNPMSRS 420
           VISDDERSDHGAPVGYRKPLPPQPQ L PQLQQKSSGLVDIPSPDSVSSDSS+NNPMSRS
Sbjct: 361 VISDDERSDHGAPVGYRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRS 420

Query: 421 KPVMYQEQVIHQIPSSATRLPGSPADPKVNISDQNTRVHIPQQVQESGYVLQSHYDQHQQ 480
           KPVMYQEQV+HQIPSSA RLPGSPADPKVN  DQN RVHI QQVQE GYVL S YDQHQ 
Sbjct: 421 KPVMYQEQVVHQIPSSAVRLPGSPADPKVNFPDQNARVHIQQQVQEPGYVLHSQYDQHQH 480

Query: 481 QQLQQQQQLQQHQQLQQQQQLQQQQQQQQQQHPPQPQQFIHAGAHYIQQHPSGAVPIPAF 540
           QQLQQ                QQ QQQQ QQHPPQPQQFIHAGAHYI QHPSGAV IPAF
Sbjct: 481 QQLQQ----------------QQPQQQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAF 540

Query: 541 FPVYSPQHHHHPHQMEQQYPVYYLPARQAQAYGNLPVQQS--SEAATAIPPGRPQTPPNP 600
           FPVYSPQHHHHPHQ+EQQYPVYYLPARQ QAYGNLPVQQS  SE+ATAIPPGRPQTPPNP
Sbjct: 541 FPVYSPQHHHHPHQIEQQYPVYYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNP 600

Query: 601 TLVTTAGYNPMRNAPIAKTEMAANAFKQTTTPAQSLVQVPTSQHQQQYVGYSQGYSHIQH 660
           TLVTTA YN MRN PIAKTEMAANAFKQTTT  QSLVQVPT+QHQQQYVGY+QGYSHIQH
Sbjct: 601 TLVTTAAYNHMRNPPIAKTEMAANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQH 660

Query: 661 PSQSVTPTSAPGNYGYEFTDPAHSQIYYTQPLAPSQYQAMPAAAVMLPENSAQLPTDNIK 720
           PSQSVTPTSA  NY YEF+DPAHSQIYYTQPL PSQYQAMPAAAVMLPENSAQLPTDNIK
Sbjct: 661 PSQSVTPTSATANYAYEFSDPAHSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIK 708

Query: 721 QQMRTSQPL 728
           QQMRTSQPL
Sbjct: 721 QQMRTSQPL 708

[Close]

BLAST of Lcy13g004960 vs. NCBI nr
Match: XP_008446641.1 (PREDICTED: RNA polymerase II degradation factor 1 [Cucumis melo] >KAA0034588.1 RNA polymerase II degradation factor 1 [Cucumis melo var. makuwa] >TYK09140.1 RNA polymerase II degradation factor 1 [Cucumis melo var. makuwa])

HSP 1 Score: 1219.1 bits (3153), Expect = 0.0e+00
Identity = 647/729 (88.75%), Postives = 664/729 (91.08%), Query Frame = 0


Query: 1   MTEPPPPPPVQPLPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPAALAGRLRLMCSYGG 60
           MTEPPPPPP Q +PPAVSPHLNYPESLDSSPRSRNTDTWDEPLAP  LA RLRLMCSYGG
Sbjct: 1   MTEPPPPPPTQTIPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLASRLRLMCSYGG 60

Query: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLSARLSKTLLNGRPFTLKYQLPNEDLDSL 120
           HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDL+ARLSKTLLNGRPFTLKYQLPNEDLDSL
Sbjct: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120

Query: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180
           ISVTTDEDLENMIDEYDRTASNSSNP+AKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSNPSAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180

Query: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSAPREVEGSQPGSFGNGKGGKQ 240
           WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDS PRE +GSQPGSFGNGKGGKQ
Sbjct: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 240

Query: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNSGGGGMGAVRVQDQKVGIE 300
           DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGN+G  G G VRVQDQK+GIE
Sbjct: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGAVGAGVVRVQDQKLGIE 300

Query: 301 EQFSQMSVGGGGVGQKQQEEAFAVLSSPPPLPTTIVATAAGSAIPVSSAAGVGVGEYSNR 360
           EQFSQMS     VGQKQQ+EAF  LSSPPPLPTTIV +AAGSAIPVSSAAG+ VGEY+NR
Sbjct: 301 EQFSQMS-----VGQKQQDEAFTALSSPPPLPTTIVVSAAGSAIPVSSAAGLVVGEYTNR 360

Query: 361 VISDDERSDHGAPVGYRKPLPPQPQPLAPQLQQKSSGLVDIPSPDSVSSDSSINNPMSRS 420
           VISDDERSDHGAPVG+RKPLPPQPQ L PQLQQKSSGLVDIPSPDSVSSDSS+NNPMSRS
Sbjct: 361 VISDDERSDHGAPVGHRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRS 420

Query: 421 KPVMYQEQVIHQIPSSATRLPGSPADPKVNISDQNTRVHIPQQVQESGYVLQSHYDQHQQ 480
           KPVMYQEQV HQIPSSA RLPGSPADPKVN  DQN RVHI QQVQESGYVL S YDQHQ 
Sbjct: 421 KPVMYQEQV-HQIPSSAVRLPGSPADPKVNFPDQNARVHIQQQVQESGYVLHSQYDQHQH 480

Query: 481 QQLQQQQQLQQHQQLQQQQQLQQQQQQQQQQHPPQPQQFIHAGAHYIQQHPSGAVPIPAF 540
           QQLQ                 QQQ QQQ QQHPPQPQQFIHAGAHYI QHPSGAV IPAF
Sbjct: 481 QQLQ-----------------QQQPQQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAF 540

Query: 541 FPVYSPQHHHHPHQMEQQYPVYYLPARQAQAYGNLPVQQS--SEAATAIPPGRPQTPPNP 600
           FPVYSPQHHHHPHQ+EQQYPVYYLPARQ QAYGNLPVQQS  SE+ATAIPPGRPQTPPNP
Sbjct: 541 FPVYSPQHHHHPHQIEQQYPVYYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNP 600

Query: 601 TLVTTAGYNPMRNAPIAKTEMAANAFKQTTTPAQSLVQVPTSQHQQQYVGYSQGYSHIQH 660
           TLVTTA YN MRN PIAKTEMAANAFKQTTT  QSLVQVPT+QHQQQYVGY+QGYSHIQH
Sbjct: 601 TLVTTAAYNHMRNPPIAKTEMAANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQH 660

Query: 661 PSQSVTPTSAPGNYGYEFTDPAHSQIYYTQPLAPSQYQAMPAAAVMLPENSAQLPTDNIK 720
           PSQSV PTSA  NY YEF+DPAHSQIYYTQPL PSQYQAMPAAAVMLPENSAQLPTDNIK
Sbjct: 661 PSQSVPPTSATANYAYEFSDPAHSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIK 706

Query: 721 QQMRTSQPL 728
           QQMRTSQPL
Sbjct: 721 QQMRTSQPL 706

[Close]

BLAST of Lcy13g004960 vs. NCBI nr
Match: XP_022945013.1 (negative elongation factor A-like [Cucurbita moschata])

HSP 1 Score: 1214.1 bits (3140), Expect = 0.0e+00
Identity = 648/730 (88.77%), Postives = 671/730 (91.92%), Query Frame = 0


Query: 1   MTEPPPPPPVQPLPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPAALAGRLRLMCSYGG 60
           MTEP PPPP QPLP AV+PHLNYPES+DSSPRSRN DTWDEPLAPAALA RLR MCSYGG
Sbjct: 1   MTEPLPPPPTQPLPSAVAPHLNYPESVDSSPRSRNADTWDEPLAPAALASRLRFMCSYGG 60

Query: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLSARLSKTLLNGRPFTLKYQLPNEDLDSL 120
           HIVPRPHDKTLCYV GETRIVVVDRHTSLSDL+ARLSKTLLNGRPFTLKYQLPNEDLDSL
Sbjct: 61  HIVPRPHDKTLCYVSGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120

Query: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180
           ISVTTDEDLENMIDEYDRTASNSSN AAKPSRLRLFLFPI+PDVSQSIGPILESSTSSDD
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSNSAAKPSRLRLFLFPIQPDVSQSIGPILESSTSSDD 180

Query: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSAPREVEGSQPGSFGNGKGGKQ 240
           WFLNALNGAGLLNRGFSD+ASVNCLLGLDDDVGVNNLDS  RE EGSQPGSFGNGKGGKQ
Sbjct: 181 WFLNALNGAGLLNRGFSDTASVNCLLGLDDDVGVNNLDSGTREAEGSQPGSFGNGKGGKQ 240

Query: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNSGGGGMGAVRVQDQKVGIE 300
           DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVH+ED+GNSGGGG+GAVRVQDQKVGIE
Sbjct: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHLEDTGNSGGGGVGAVRVQDQKVGIE 300

Query: 301 EQFSQMSVGGGGVGQKQQEEAFAVLSSPPPLPTTIVATAAGSAIPVSSAAGVGVGEYSNR 360
           EQFSQMSV  GGVGQKQQEE FAVLSSPPPLPTTIVATAAGSAIPVS+A GVGVGEYSNR
Sbjct: 301 EQFSQMSV--GGVGQKQQEEVFAVLSSPPPLPTTIVATAAGSAIPVSAAVGVGVGEYSNR 360

Query: 361 VISDDERSDHGAPVGYRKPLPPQPQPLAPQLQQKSSGLVDIPSPDSVSSDSSINNPMSRS 420
            ISDDERSDHG PVGYRKPLPPQPQ L PQLQQKSSGLVDIPSPDS+SSDSSINNPMSRS
Sbjct: 361 AISDDERSDHGVPVGYRKPLPPQPQSLIPQLQQKSSGLVDIPSPDSMSSDSSINNPMSRS 420

Query: 421 KPVMYQEQVIHQIPSSATRLPGSPADPKVNISDQNTRVHIPQQVQESGYVLQSHYDQHQQ 480
            PVMYQEQV HQIPSSA R+PGSPADPK NIS+QNTRVHIPQQVQE+GYVLQSHYDQH  
Sbjct: 421 VPVMYQEQV-HQIPSSAVRIPGSPADPKANISEQNTRVHIPQQVQEAGYVLQSHYDQH-- 480

Query: 481 QQLQQQQQLQQHQQLQQQQQLQQQQQQQQQQHPPQPQQFIHAGAHYIQQHPSGAVPIPAF 540
                        QLQQQ    QQQ QQQQQHPPQPQQFIHAGAHYIQQHPSGA+P+PAF
Sbjct: 481 -------------QLQQQ---LQQQLQQQQQHPPQPQQFIHAGAHYIQQHPSGAMPMPAF 540

Query: 541 FPVYSPQHHHHPHQMEQQYPVYYLPARQAQAYGNLPVQQS--SEAATAIPPGRPQTPPNP 600
           FPVYSPQH H PH+ME QYPVYYLPARQAQAYGNLPVQQS  SEA  AIPPG+PQTP NP
Sbjct: 541 FPVYSPQHPHLPHRMEHQYPVYYLPARQAQAYGNLPVQQSTMSEAVAAIPPGQPQTPTNP 600

Query: 601 TLVTTAGYNPMRNAPIAKTEMAANAFKQTTTPAQSLVQVPTSQHQQQYVGYSQGYSHIQH 660
           T VTTA +NPMRNAPIAKTE+ ANA+KQTTTPAQSLVQVPTSQHQQQYVGY+QGYSHIQH
Sbjct: 601 TRVTTAAFNPMRNAPIAKTEVVANAYKQTTTPAQSLVQVPTSQHQQQYVGYNQGYSHIQH 660

Query: 661 PSQSVTPTSAPGNYGYEFTDPAHSQIYYTQPLA-PSQYQAMPAAAVMLPENSAQLPTDNI 720
           PSQSVTPTSAP NY YEF +PAHSQIYYTQPLA PSQYQAMPA AVMLPENSAQLPTDN+
Sbjct: 661 PSQSVTPTSAPANYAYEFPEPAHSQIYYTQPLAPPSQYQAMPAPAVMLPENSAQLPTDNM 709

Query: 721 KQQMRTSQPL 728
           KQQMRTSQPL
Sbjct: 721 KQQMRTSQPL 709

[Close]

BLAST of Lcy13g004960 vs. NCBI nr
Match: XP_023541650.1 (uncharacterized protein LOC111801745 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1213.0 bits (3137), Expect = 0.0e+00
Identity = 643/730 (88.08%), Postives = 668/730 (91.51%), Query Frame = 0


Query: 1   MTEPPPPPPVQPLPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPAALAGRLRLMCSYGG 60
           MTEP PPPP QPLP AV+PHLNYPES+DSSPRSRN DTWDEPLAPAALA RLR MCSYGG
Sbjct: 1   MTEPLPPPPTQPLPSAVAPHLNYPESVDSSPRSRNADTWDEPLAPAALASRLRFMCSYGG 60

Query: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLSARLSKTLLNGRPFTLKYQLPNEDLDSL 120
           HIVPRPHDKTLCYV GETRIVVVDRHTSLSDL+ARLSKTLLNGRPFTLKYQLPNEDLDSL
Sbjct: 61  HIVPRPHDKTLCYVSGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120

Query: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180
           ISVTTDEDLENMIDEYDRTASNSSN AAKPSRLRLFLFPI+PDVSQSIGPILESSTSSDD
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSNSAAKPSRLRLFLFPIQPDVSQSIGPILESSTSSDD 180

Query: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSAPREVEGSQPGSFGNGKGGKQ 240
           WFLNALNGAGLLNRGFSD+ASVNCLLGLDDDVGVNNLDS  RE EGSQPGSFGNGKGGKQ
Sbjct: 181 WFLNALNGAGLLNRGFSDTASVNCLLGLDDDVGVNNLDSGTREAEGSQPGSFGNGKGGKQ 240

Query: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNSGGGGMGAVRVQDQKVGIE 300
           DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVH+ED+GNSGGGG+GAVRVQDQKVGIE
Sbjct: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHLEDTGNSGGGGVGAVRVQDQKVGIE 300

Query: 301 EQFSQMSVGGGGVGQKQQEEAFAVLSSPPPLPTTIVATAAGSAIPVSSAAGVGVGEYSNR 360
           EQFSQMSV  GGVGQKQQEEAFA+ SSPPPLPTTIVATAAGSAIPVS+A GVGVGEYSNR
Sbjct: 301 EQFSQMSV--GGVGQKQQEEAFAIHSSPPPLPTTIVATAAGSAIPVSAAVGVGVGEYSNR 360

Query: 361 VISDDERSDHGAPVGYRKPLPPQPQPLAPQLQQKSSGLVDIPSPDSVSSDSSINNPMSRS 420
            ISDDERSDHG PVGYRKPLPPQPQ L PQLQQKSSGLVDIPSPDS+SSDSSINNPMSRS
Sbjct: 361 AISDDERSDHGVPVGYRKPLPPQPQSLIPQLQQKSSGLVDIPSPDSMSSDSSINNPMSRS 420

Query: 421 KPVMYQEQVIHQIPSSATRLPGSPADPKVNISDQNTRVHIPQQVQESGYVLQSHYDQHQQ 480
            PVMYQEQV HQIPSSA R+PGSPADPK NIS+QNTRVHIPQQVQE+GYVLQSHYDQHQ 
Sbjct: 421 IPVMYQEQV-HQIPSSAVRIPGSPADPKANISEQNTRVHIPQQVQEAGYVLQSHYDQHQ- 480

Query: 481 QQLQQQQQLQQHQQLQQQQQLQQQQQQQQQQHPPQPQQFIHAGAHYIQQHPSGAVPIPAF 540
                                 QQQ QQQQQHPPQPQQFIHAGAHYIQQHPSGA+P+PAF
Sbjct: 481 ---------------------LQQQLQQQQQHPPQPQQFIHAGAHYIQQHPSGAMPMPAF 540

Query: 541 FPVYSPQHHHHPHQMEQQYPVYYLPARQAQAYGNLPVQQS--SEAATAIPPGRPQTPPNP 600
           FPVYSPQH H PH+ME QYPVYYLPARQAQAYGNLPVQQS  SEA  AIPPG+PQTP NP
Sbjct: 541 FPVYSPQHPHLPHRMEHQYPVYYLPARQAQAYGNLPVQQSTMSEAVAAIPPGQPQTPTNP 600

Query: 601 TLVTTAGYNPMRNAPIAKTEMAANAFKQTTTPAQSLVQVPTSQHQQQYVGYSQGYSHIQH 660
           TLVT+A +NPMRNAPIAKTE+ ANA+KQTTTPAQSLVQVPTSQHQQQYVGY+QGYSHIQH
Sbjct: 601 TLVTSAAFNPMRNAPIAKTEVVANAYKQTTTPAQSLVQVPTSQHQQQYVGYNQGYSHIQH 660

Query: 661 PSQSVTPTSAPGNYGYEFTDPAHSQIYYTQPLA-PSQYQAMPAAAVMLPENSAQLPTDNI 720
           PSQSVTPTSAP NY YEF +PAHSQIYYTQPLA PSQYQAMPA AVMLPENSAQLPTDN+
Sbjct: 661 PSQSVTPTSAPANYAYEFPEPAHSQIYYTQPLAPPSQYQAMPAPAVMLPENSAQLPTDNM 705

Query: 721 KQQMRTSQPL 728
           KQQMRTSQPL
Sbjct: 721 KQQMRTSQPL 705

[Close]

BLAST of Lcy13g004960 vs. TAIR 10
Match: AT2G01190.1 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 528.9 bits (1361), Expect = 6.6e-150
Identity = 375/766 (48.96%), Postives = 478/766 (62.40%), Query Frame = 0


Query: 12  PLPPAVSPHL--NYPESLDSSPRSRNTDTWDEPLAP---------AALAGRLRLMCSYGG 71
           P+PP + PH+  +YPESLDSSPRSR TD WD+  AP         +A++ +LR MCSYGG
Sbjct: 24  PVPPPLPPHVTSSYPESLDSSPRSRTTDGWDDLPAPSGGGGGGGGSAVSSKLRFMCSYGG 83

Query: 72  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLSARLSKTLLNGRPFTLKYQLPNEDLDSL 131
           HI+PRPHDK+LCY+ G+TRIVVVDR++SL  L ARLS TLL+GR FTLKYQLP+EDLDSL
Sbjct: 84  HILPRPHDKSLCYMGGDTRIVVVDRNSSLPSLIARLSNTLLDGRSFTLKYQLPSEDLDSL 143

Query: 132 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 191
           ISVTTDEDL+NMI+EYDRT S S+  + KPSRLRLFLF  KP+ +QS+G ILESS  SDD
Sbjct: 144 ISVTTDEDLDNMIEEYDRTISASN--STKPSRLRLFLFTSKPEATQSMGQILESSAKSDD 203

Query: 192 WFLNALNGAGLLNRGFSDS-ASVNCLLGLDDDVGV-------NNLDSAPREVEGSQ---- 251
           WFLNALN AGLLNRGFSDS  +VN LLGLDD + +       NN D     V+ ++    
Sbjct: 204 WFLNALNSAGLLNRGFSDSDTNVNRLLGLDDALALRSNSGDNNNRDGDDGSVKSAKQQQP 263

Query: 252 -PGSFGNGKGGKQDVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNSGGGGM 311
            P      + G QDV+ +PDSPM++T+SSFGSTSSSPSLANLPPIRVHVE+ G       
Sbjct: 264 PPPQQQEQQQGGQDVNCLPDSPMLDTSSSFGSTSSSPSLANLPPIRVHVEEPG------- 323

Query: 312 GAVRVQDQK-VGIEEQFSQMSVGGGGVGQKQQEEAFAVLSSPPPLPTTIVATAAGSAIPV 371
           G   + DQ+ +GIEEQF++ +VG      +  ++ FA +SSPPP+P TI   AA    PV
Sbjct: 324 GVRTLPDQRNLGIEEQFARFNVGN---KHQLHDDGFAAISSPPPMPVTIALPAA----PV 383

Query: 372 SSAAGVGVGEYSNRVISDDERSDHGAPVGYRKPLPP--QPQPLAP----QLQQKSSGLVD 431
           ++A      E+  RV SDDERSDHG   GYRKP  P  QPQ L P    QL+  S G  +
Sbjct: 384 TAA--TVSNEFQARVYSDDERSDHGVQAGYRKPPTPRSQPQNLPPQQAHQLKSNSGGGHE 443

Query: 432 IPSPDSVSSDSSINNPMSRSKPVMYQEQVIHQIPSSATRLPG--SPADPKVNISDQNTRV 491
           +PSP+SVSSDSS++NPM   +P +YQE  I QIPS +T + G  +P+DP   +S      
Sbjct: 444 LPSPNSVSSDSSMSNPMFHQRPSVYQEP-IAQIPSGSTVVTGMINPSDPSTLLSQ----- 503

Query: 492 HIPQQVQESGYVLQSHYDQHQQQQLQQQQQLQQHQQLQQQQQLQQQQQQQQQQHPPQPQQ 551
               Q Q+  Y+L                    H Q +QQ    Q Q QQQ  H   P Q
Sbjct: 504 ---HQNQDPAYIL--------------------HPQFEQQS--AQSQPQQQFIHTAAPPQ 563

Query: 552 FIHAGAHYIQQHPSGAVPIPAFFPVYSPQH-----HHHPHQMEQQ-YPVYYLPARQAQAY 611
           +IH        HPS  +P+P +  VY  Q      H H  +++QQ YPVYY+ A      
Sbjct: 564 YIH-------HHPSSGLPVPTYIQVYPSQQPQQSFHQHAGRLDQQPYPVYYVTAPVPPRP 623

Query: 612 GNLPVQQS---SEAATAIPPGRPQTPPNPTLVTTAGYNPMRNAPIAKTEMAANAFKQTTT 671
            ++PV QS   S+AA +IP       PN T++     N MR+    K EM   A   TT 
Sbjct: 624 YSMPVPQSPSVSDAAGSIPSNH----PNSTMMPPPPNNHMRSVSSGKPEM-GQAGVYTTA 683

Query: 672 P----AQSLVQVPTSQHQQQYVGYSQGYSHIQHPSQSVTPTSAPGNYGYEFTDPAHSQIY 728
           P    AQ + Q+PT  +QQQ++GYSQ    I+HP QS   ++   NYGYE+ D AH+QIY
Sbjct: 684 PGVGGAQMVHQIPT--NQQQFMGYSQ----IRHPPQS--GSAGNPNYGYEYVDNAHTQIY 720

[Close]

BLAST of Lcy13g004960 vs. TAIR 10
Match: AT3G18230.1 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 295.8 bits (756), Expect = 9.4e-80
Identity = 292/756 (38.62%), Postives = 393/756 (51.98%), Query Frame = 0


Query: 4   PPPPPPVQPLPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPAALAG-RLRLMCSYGGHI 63
           P P   V    PA    +   + +D SPR+  TDT   P   AA+ G +LRLMCS+GGHI
Sbjct: 15  PTPAAAVSSAIPAPVKSVAVQQPIDGSPRAVATDTGGIPEPLAAVPGAKLRLMCSFGGHI 74

Query: 64  VPRPHDKTLCYVCGETRIVVVDRHTSLSDLSARLSKTLLNGRPFTLKYQLPNEDLDSLIS 123
           +PRPHDK+L Y  GETRIVVVDR  SLS L +RLS  LLNGR FTLKYQLP+EDLDSL++
Sbjct: 75  MPRPHDKSLTYSGGETRIVVVDRRASLSSLRSRLSSMLLNGRSFTLKYQLPSEDLDSLVT 134

Query: 124 VTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDDWF 183
           +TTDEDLENMI+EYDR AS+++  A    RLRLFLF  K + + ++G +L+  T SD WF
Sbjct: 135 ITTDEDLENMIEEYDRAASSAT--ATATQRLRLFLFANKLETAATMGSLLD-GTKSDTWF 194

Query: 184 LNALNGAGLLNRGFSDSASV-NCLLGLDDDVG----VNNLDSAPREVEGSQPGSFGNGKG 243
           ++ALN +GLL RG SDSA+V N L+ LD+  G    + NL++        +     NG  
Sbjct: 195 VDALNQSGLLPRGLSDSAAVNNTLVNLDEASGGETEIQNLETNVGGENNKRGDLVANGVI 254

Query: 244 GKQDVH--SVPDSPMIETT-SSFGSTSSSPSLANLPPIRVHVEDSGNSGGGGMGAVRVQD 303
             Q++H  S+PDSPM+E   SS GS+SSSPS +NLPPIRV V                +D
Sbjct: 255 SHQEMHMSSMPDSPMMEAAGSSIGSSSSSPSTSNLPPIRVRVS---------------ED 314

Query: 304 QKVGIEEQFSQMSVGGGGVGQKQQEEAFAVLSSPPPLPTTIVATAAGSAIPVSSAAGVGV 363
           Q+  IEEQ +QM+       Q+Q ++  +++++ P +          +A+  ++A G G 
Sbjct: 315 QR--IEEQLAQMTFSNMQT-QRQFDDGVSLMANRPMMIPP--GAMNDAAMAYNNAPGDGT 374

Query: 364 GEYSNRVIS-DDERSDHGAPVGYRK-PLPPQPQPLAPQLQQKSSGLVDIPSPDSVSSDSS 423
              SN  +S +D+RS+ G   GYRK PLP QP  + P    ++ G   + SPDSV+SD+S
Sbjct: 375 APASNGHVSPEDDRSELGVSTGYRKPPLPMQPVTIPP----RTVGGYGLTSPDSVASDTS 434

Query: 424 INNPMSRSKPVMYQEQVIHQIPSSATRLPGSPADPKVNISDQNTRVHIPQQVQESGYVLQ 483
           I++  S SKP+ YQ+Q     P +  R P  P       S Q+++V +PQ    S     
Sbjct: 435 ISSATSFSKPMYYQDQ-----PPALPRAP--PVAQPETTSAQSSQV-LPQTENTSA---- 494

Query: 484 SHYDQHQQQQLQQQQQLQQHQQLQQQQQLQQQQQQQQQQHPPQPQQFIHAGAHYIQQHPS 543
                          Q   H   Q        QQQQQ   P   Q F+H G  YI  HPS
Sbjct: 495 ---------------QTTSHVLSQPGTYTTMDQQQQQ---PLAQQPFLHQGVQYI-PHPS 554

Query: 544 GAVPIPAFFPVYSPQHHHHPHQMEQQYPVYYLPARQAQAYGNLPVQQSSEAATAIPPGRP 603
                  + P+YS Q        +Q YPVY +   Q+Q Y              IP G P
Sbjct: 555 ------QYIPIYSHQ--------QQNYPVYVMSVPQSQQY--------------IPAGTP 614

Query: 604 QTPPNPTLVTTAGYNPMRNAPIAKTEMAANAFKQTTTPAQSLVQVPTSQHQQQYVGYSQG 663
              PN    +  G N       ++ E A N ++          QV   Q Q QY+GY+  
Sbjct: 615 PLYPN----SKPGTN-------SRPEAAQNVYRAAPP------QVIQLQQQHQYMGYAGA 666

Query: 664 YSHIQHPSQSV------TPTSAPGNYG--YEFTDPAHSQIYY-TQ--------PLAPSQY 723
             H  + + +         T+A  NYG  +E+T+  +  +YY TQ        PLA S Y
Sbjct: 675 PQHSTNANANYGTGAPQHSTNANANYGGPFEYTNSPNETVYYHTQAPAANTAIPLA-SPY 666

Query: 724 QAM--PAAAVMLPENSAQLPTDNIKQQ--MRTSQPL 728
           Q+M   AAA  L + S Q+  D  KQQ  M  SQPL
Sbjct: 735 QSMTPAAAAAALADMSKQMALDGGKQQQHMAASQPL 666

[Close]

BLAST of Lcy13g004960 vs. TAIR 10
Match: AT4G05150.1 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 147.1 bits (370), Expect = 5.4e-35
Identity = 111/275 (40.36%), Postives = 151/275 (54.91%), Query Frame = 0


Query: 25  ESLDSSPRSRNTDTWDEPLAPAALAGRLRLMCSYGGHIVPRPHDKTLCYVCGETRIVVVD 84
           +SL SSPRS       +P        R+R MC++GG I+PRP D  LCYV G+ R+V V 
Sbjct: 43  DSLASSPRSEYD---SQP--------RVRFMCTFGGRILPRPPDNQLCYVGGDNRMVAVH 102

Query: 85  RHTSLSDLSARLSKTLLNGRP-FTLKYQLPNEDLDSLISVTTDEDLENMIDEYDRTASNS 144
           RHT+ + L ++L+K  L+G+   ++KYQLPNEDLD+LISV+TDED+ENM+DEYDR A N 
Sbjct: 103 RHTTFASLLSKLAK--LSGKSNISVKYQLPNEDLDALISVSTDEDVENMMDEYDRVAQN- 162

Query: 145 SNPAAKPSRLRLFLF-------PIKPDVSQSIGPILESSTSSDDWFLNALN-GAGLLNRG 204
            NP A  SRLRLFLF             + SI  +L+SS + + WFL+ALN G+      
Sbjct: 163 QNPRA--SRLRLFLFTKNVAGEEDNDSRASSISSLLDSSVNREQWFLDALNLGSSAAATA 222

Query: 205 FSDSASVNCLLGLDDDV------------GVNNLD--SAPREVEGSQPGSFGNGKGGKQ- 264
            S+  S      +  +V            G++N D  + P E+    P      K  ++ 
Sbjct: 223 VSNGGSGRVFERVRSEVSSIVSEVPDYLFGLDNFDETAPPHELRDRDP----RAKIQREV 282

Query: 265 DVHSVPDSPMIETTSSFGSTSSSP----SLANLPP 272
              S P SP  +  S +GSTSS+P    S   LPP
Sbjct: 283 STLSDPGSPRRDVPSPYGSTSSAPVMRISTPELPP 297

[Close]

BLAST of Lcy13g004960 vs. TAIR 10
Match: AT5G64430.1 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 131.3 bits (329), Expect = 3.1e-30
Identity = 86/179 (48.04%), Postives = 107/179 (59.78%), Query Frame = 0


Query: 22  NYPESLDSSPRSRNTDTWDEPLAP--------AALAGRLRLMCSYGGHIVPRPHDKTLCY 81
           +YP+S DSSPRSR  + +D P  P           + +++ MCSYGG I PRPHD  L Y
Sbjct: 8   SYPDSTDSSPRSREIE-FDNPPPPWDDQNQNQQQHSYKVKFMCSYGGKIQPRPHDNQLTY 67

Query: 82  VCGETRIVVVDRHTSLSDLSARLSKTL----LNGRPFTLKYQLPNEDLDSLISVTTDEDL 141
           V GET+I+ VDR      L+++LS         G   T KYQLP EDLD+LISVT D+DL
Sbjct: 68  VNGETKILSVDRGIRFPVLASKLSTVCGGGDGGGGEVTFKYQLPGEDLDALISVTNDDDL 127

Query: 142 ENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSD-DWFLNALN 188
           E+M+ EYDR    SS    KP+R+RLFLFP     S   G   +SST SD D F+ ALN
Sbjct: 128 EHMMHEYDRLLRLSS----KPARMRLFLFP----ASSGFGS--QSSTQSDRDRFVEALN 175

[Close]

BLAST of Lcy13g004960 vs. TAIR 10
Match: AT5G09620.1 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 129.4 bits (324), Expect = 1.2e-29
Identity = 81/173 (46.82%), Postives = 104/173 (60.12%), Query Frame = 0


Query: 22  NYPESLDSSPRSR-----NTDTWDEPLAPAALAGRLRLMCSYGGHIVPRPHDKTLCYVCG 81
           +YP+S +SSPRSR     N   W++         +++LMCSYGG I PRPHD  L YV G
Sbjct: 8   SYPDSAESSPRSRDVEFENPSPWEDQQQQNY---KVKLMCSYGGKIQPRPHDNQLTYVNG 67

Query: 82  ETRIVVVDRHTSLSDLSARLSKTLL---NGRPFTLKYQLPNEDLDSLISVTTDEDLENMI 141
           +T+I+ VDR      L ++LS       +G   + KYQLP EDLD+LISVT DEDLE+M+
Sbjct: 68  DTKIMSVDRGIRFPALVSKLSAVCSGGGDGGEISFKYQLPGEDLDALISVTNDEDLEHMM 127

Query: 142 DEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDDWFLNAL 187
            EYDR    S+    KP+R+RLFLFP  P +S   G   E ST SD   LN +
Sbjct: 128 HEYDRLLRLST----KPARMRLFLFPSSP-ISGGFGS--EGSTKSDRDTLNPI 170

The following BLAST results are available for this feature:

BLAST of Lcy13g004960 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy13g004960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWH3	0.0e+00	89.44	PB1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G610450 PE=4 SV...	[more]
A0A5A7SVC4	0.0e+00	88.75	RNA polymerase II degradation factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3BF26	0.0e+00	88.75	RNA polymerase II degradation factor 1 OS=Cucumis melo OX=3656 GN=LOC103489312 P...	[more]
A0A6J1FZM0	0.0e+00	88.77	negative elongation factor A-like OS=Cucurbita moschata OX=3662 GN=LOC111449378 ...	[more]
A0A6J1HQW4	0.0e+00	87.50	RNA polymerase II degradation factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of Lcy13g004960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038892018.1	0.0e+00	90.41	putative mediator of RNA polymerase II transcription subunit 12 [Benincasa hispi...	[more]
XP_004135079.1	0.0e+00	89.44	RNA polymerase II degradation factor 1 [Cucumis sativus] >KGN52111.1 hypothetica...	[more]
XP_008446641.1	0.0e+00	88.75	PREDICTED: RNA polymerase II degradation factor 1 [Cucumis melo] >KAA0034588.1 R...	[more]
XP_022945013.1	0.0e+00	88.77	negative elongation factor A-like [Cucurbita moschata]	[more]
XP_023541650.1	0.0e+00	88.08	uncharacterized protein LOC111801745 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lcy13g004960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01190.1	6.6e-150	48.96	Octicosapeptide/Phox/Bem1p family protein	[more]
AT3G18230.1	9.4e-80	38.62	Octicosapeptide/Phox/Bem1p family protein	[more]
AT4G05150.1	5.4e-35	40.36	Octicosapeptide/Phox/Bem1p family protein	[more]
AT5G64430.1	3.1e-30	48.04	Octicosapeptide/Phox/Bem1p family protein	[more]
AT5G09620.1	1.2e-29	46.82	Octicosapeptide/Phox/Bem1p family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 475..509
None	No IPR available	GENE3D	3.10.20.90		coord: 69..158 e-value: 1.5E-10 score: 43.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 247..268
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 362..419
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 389..419
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..269
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 578..598
None	No IPR available	PANTHER	PTHR31066:SF27	EXPRESSED PROTEIN	coord: 9..718
None	No IPR available	PANTHER	PTHR31066	OS05G0427100 PROTEIN-RELATED	coord: 9..718
None	No IPR available	CDD	cd06410	PB1_UP2	coord: 55..158 e-value: 1.93026E-47 score: 160.849
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 67..167
IPR000270	PB1 domain	SMART	SM00666	PB1_new	coord: 66..160 e-value: 2.1E-29 score: 113.7
IPR000270	PB1 domain	PFAM	PF00564	PB1	coord: 69..159 e-value: 6.7E-17 score: 61.2
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 51..160 score: 13.595329

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy13g004960.1	Lcy13g004960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006414	translational elongation
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003746	translation elongation factor activity