Lcy13g003340 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy13g003340
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	nodulin-related protein 1-like
Location	Chr13: 2800875 .. 2801300 (+)
RNA-Seq Expression	Lcy13g003340
Synteny	Lcy13g003340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTTCTTGTCTAAACTCGGCGGCTCCACCGACAAGCCACAGGACCAAAATCCAGACCACCACCAGACATCGGCTTCCGATCTCCTGTCCAGCGCCAGGCTGGTCGCCGACGCCGCCAAATCCTCTTTCAGCGGCGGCGGCAAAGACATGGACAAGGGCAAAGTCGCCGGAGCCGCCGCCGACCTTCTCGGTGCTGCTTCCGATTACGGAAAATTGGACGAAACCAAGGGAGTTGGGAAATATGTAGACAAAGCTGAGGACTATCTCAATCAGTACGAAAAGTCTCATTCTGCTCCTCAAGGTCCCGGCGGCGAGCCGAAGGCGGAAGAGCCGCCGAAGAAAGAGAACTCCGGCGAGAAGGAAGAGGGCGGATCTGGGTTTGGGGATTATTTGAAGGTGGCTGAAGGTTTCTTGAAGAAATGA

mRNA sequence

ATGGACTTCTTGTCTAAACTCGGCGGCTCCACCGACAAGCCACAGGACCAAAATCCAGACCACCACCAGACATCGGCTTCCGATCTCCTGTCCAGCGCCAGGCTGGTCGCCGACGCCGCCAAATCCTCTTTCAGCGGCGGCGGCAAAGACATGGACAAGGGCAAAGTCGCCGGAGCCGCCGCCGACCTTCTCGGTGCTGCTTCCGATTACGGAAAATTGGACGAAACCAAGGGAGTTGGGAAATATGTAGACAAAGCTGAGGACTATCTCAATCAGTACGAAAAGTCTCATTCTGCTCCTCAAGGTCCCGGCGGCGAGCCGAAGGCGGAAGAGCCGCCGAAGAAAGAGAACTCCGGCGAGAAGGAAGAGGGCGGATCTGGGTTTGGGGATTATTTGAAGGTGGCTGAAGGTTTCTTGAAGAAATGA

Coding sequence (CDS)

ATGGACTTCTTGTCTAAACTCGGCGGCTCCACCGACAAGCCACAGGACCAAAATCCAGACCACCACCAGACATCGGCTTCCGATCTCCTGTCCAGCGCCAGGCTGGTCGCCGACGCCGCCAAATCCTCTTTCAGCGGCGGCGGCAAAGACATGGACAAGGGCAAAGTCGCCGGAGCCGCCGCCGACCTTCTCGGTGCTGCTTCCGATTACGGAAAATTGGACGAAACCAAGGGAGTTGGGAAATATGTAGACAAAGCTGAGGACTATCTCAATCAGTACGAAAAGTCTCATTCTGCTCCTCAAGGTCCCGGCGGCGAGCCGAAGGCGGAAGAGCCGCCGAAGAAAGAGAACTCCGGCGAGAAGGAAGAGGGCGGATCTGGGTTTGGGGATTATTTGAAGGTGGCTGAAGGTTTCTTGAAGAAATGA

Protein sequence

MDFLSKLGGSTDKPQDQNPDHHQTSASDLLSSARLVADAAKSSFSGGGKDMDKGKVAGAAADLLGAASDYGKLDETKGVGKYVDKAEDYLNQYEKSHSAPQGPGGEPKAEEPPKKENSGEKEEGGSGFGDYLKVAEGFLKK

Homology

[Close]

BLAST of Lcy13g003340 vs. ExPASy Swiss-Prot
Match: Q9ZQ80 (Nodulin-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=NRP1 PE=1 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.3e-19
Identity = 62/141 (43.97%), Postives = 89/141 (63.12%), Query Frame = 0


Query: 10  STDKP-QDQNPDHHQTSA-SDLLSSARLVADAAKSSFSGGGKDMDKGKVAGAAADLLGAA 69
           +T KP  + +P  H+ +  ++L++SA++VA+AA+++       +DK KVAGA AD+L AA
Sbjct: 47  TTHKPVSNTDPTTHRPATNAELMASAKIVAEAAQAAARHESDKLDKAKVAGATADILDAA 106

Query: 70  SDYGKLDETKGVGKYVDKAEDYLNQYEKSHS--------APQGPGGEPKAEEPPKKENSG 129
           S YGKLDE  GVG+Y++KAE YL++YE SHS        +    GG       P  +   
Sbjct: 107 SRYGKLDEKSGVGQYLEKAEQYLHKYETSHSHSSTGGTGSHGNVGGHGGGAGAPAAKKED 166

Query: 130 EKEEGGSGFGDYLKVAEGFLK 141
           EK  GG GFGDY K+A+GF+K
Sbjct: 167 EKSGGGHGFGDYAKMAQGFMK 187

[Close]

BLAST of Lcy13g003340 vs. ExPASy TrEMBL
Match: A0A6J1G0Y4 (nodulin-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111449671 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 4.3e-53
Identity = 113/141 (80.14%), Postives = 124/141 (87.94%), Query Frame = 0


Query: 1   MDFLSKLGGSTDKPQDQNPDHHQTSASDLLSSARLVADAAKSSFSGGGKDMDKGKVAGAA 60
           MDFLSKL GS DKP DQNPD+H+ SAS+LLSSARLVADAAKSSF GGG ++DKGK AGA 
Sbjct: 1   MDFLSKLSGSADKPHDQNPDNHKPSASELLSSARLVADAAKSSFGGGGGEVDKGKAAGAG 60

Query: 61  ADLLGAASDYGKLDETKGVGKYVDKAEDYLNQYEKSHSAPQGPGGEPKAEEPPKKENSGE 120
           ADLLGAASDYGKLDETKGVGKYV++AE+YLN+YEKSHSA   P  EPK  EPPKKE SGE
Sbjct: 61  ADLLGAASDYGKLDETKGVGKYVNQAEEYLNKYEKSHSATPVPAAEPKPAEPPKKEESGE 120

Query: 121 KEEGGSGFGDYLKVAEGFLKK 142
           K+ GGSGFGDY+KVAEGFLKK
Sbjct: 121 KDGGGSGFGDYMKVAEGFLKK 141

[Close]

BLAST of Lcy13g003340 vs. ExPASy TrEMBL
Match: A0A6J1HZB1 (nodulin-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111467584 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 5.6e-53
Identity = 112/141 (79.43%), Postives = 124/141 (87.94%), Query Frame = 0


Query: 1   MDFLSKLGGSTDKPQDQNPDHHQTSASDLLSSARLVADAAKSSFSGGGKDMDKGKVAGAA 60
           MDFLSKL GS DKPQDQNPD+H+ SAS+LLSSAR+VADAAKSSF G G ++DKGK AGA 
Sbjct: 1   MDFLSKLSGSADKPQDQNPDNHKPSASELLSSARMVADAAKSSFGGSGGEVDKGKAAGAG 60

Query: 61  ADLLGAASDYGKLDETKGVGKYVDKAEDYLNQYEKSHSAPQGPGGEPKAEEPPKKENSGE 120
           ADLLGAASDYGKLDETKGVGKY+++AE+YLN+YEKSHSA   P  EPK  EPPKKE SGE
Sbjct: 61  ADLLGAASDYGKLDETKGVGKYINQAEEYLNKYEKSHSATPVPAAEPKPAEPPKKEESGE 120

Query: 121 KEEGGSGFGDYLKVAEGFLKK 142
           KE GGSGFGDY+KVAEGFLKK
Sbjct: 121 KEGGGSGFGDYMKVAEGFLKK 141

[Close]

BLAST of Lcy13g003340 vs. ExPASy TrEMBL
Match: A0A6J1DTQ5 (nodulin-related protein 1-like OS=Momordica charantia OX=3673 GN=LOC111023921 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.2e-52
Identity = 118/144 (81.94%), Postives = 124/144 (86.11%), Query Frame = 0


Query: 1   MDFLSKLGGSTDKPQDQNPDHHQTSASDLLSSARLVADAAKSSFSGGGKDMDKGKVAGAA 60
           MD  SKL GSTDKP+D  P+HH+TSASDLLSSA+LVADAAKSSF G    +DKGKVAGAA
Sbjct: 1   MDLFSKLSGSTDKPED--PEHHRTSASDLLSSAKLVADAAKSSFGGESHAVDKGKVAGAA 60

Query: 61  ADLLGAASDYGKLDETKGVGKYVDKAEDYLNQYEKSHSAPQGPGGE---PKAEEPPKKEN 120
           ADLLGAASDYGK DETKG+GKYVDKAEDYLNQYEKSHSAP G   E   PKAEEPPKKEN
Sbjct: 61  ADLLGAASDYGKFDETKGLGKYVDKAEDYLNQYEKSHSAPHGSDAEPKPPKAEEPPKKEN 120

Query: 121 SGEKEEGGSGFGDYLKVAEGFLKK 142
           SGE E GGSGFGDYLKVAEGFLKK
Sbjct: 121 SGEGEHGGSGFGDYLKVAEGFLKK 142

[Close]

BLAST of Lcy13g003340 vs. ExPASy TrEMBL
Match: A0A0A0KQS9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606550 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 6.2e-52
Identity = 111/143 (77.62%), Postives = 129/143 (90.21%), Query Frame = 0


Query: 1   MDFLSKLGG-STDKPQDQNPDHHQTSASDLLSSARLVADAAKSSFSGGGKDMDKGKVAGA 60
           MDFL KL   +TDKP+DQNPDHH+TSASDLLSSA+LVADAAKSSF GG + +DKGKVAGA
Sbjct: 1   MDFLKKLSSDATDKPEDQNPDHHKTSASDLLSSAKLVADAAKSSFGGGSESVDKGKVAGA 60

Query: 61  AADLLGAASDYGKLDETKGVGKYVDKAEDYLNQYEKSHSAPQGPGGE-PKAEEPPKKENS 120
           +ADLLGAASDYGKL+ ++G+G YV+KAE+YL+QYEKSHSAP G G E PKAEEPPKKEN+
Sbjct: 61  SADLLGAASDYGKLNPSEGIGSYVEKAENYLHQYEKSHSAPHGSGSEPPKAEEPPKKENA 120

Query: 121 GEKEEGGSGFGDYLKVAEGFLKK 142
            EKE+GGSGFGDYLK+AEGF+KK
Sbjct: 121 AEKEDGGSGFGDYLKMAEGFIKK 143

[Close]

BLAST of Lcy13g003340 vs. ExPASy TrEMBL
Match: A0A5D3D177 (Nodulin-related protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00020 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 5.6e-45
Identity = 105/145 (72.41%), Postives = 121/145 (83.45%), Query Frame = 0


Query: 1   MDFLSKLGG-STDKPQDQNPDHHQTSASDLLSSARLVADAAKSSFSGGGKDMDKGKVAGA 60
           MDFL KL   +TDKP+DQNPDHH+TSASDLLSSA+LVADAAKSSF GG   +DKGKVAGA
Sbjct: 1   MDFLKKLSSDATDKPEDQNPDHHKTSASDLLSSAKLVADAAKSSFGGGSDSVDKGKVAGA 60

Query: 61  AADLLGAASDYGKLDETKGVGKYVDKAEDYLNQYEKSHSAPQGPGGEP-KAEEPPKKENS 120
            ADLLGAASDYGKLD+TKG G YV+KAE+YL++YE SHSAP G G EP KAEEPPKKEN+
Sbjct: 61  TADLLGAASDYGKLDQTKGFGMYVEKAENYLHEYEGSHSAPHGSGSEPTKAEEPPKKENA 120

Query: 121 GEKEEGGSGFGDYLKVAE--GFLKK 142
            EK++GG   G + ++AE  GFLKK
Sbjct: 121 AEKKDGGFEGGSFSEMAEMAGFLKK 145

[Close]

BLAST of Lcy13g003340 vs. NCBI nr
Match: XP_038893443.1 (nodulin-related protein 1-like [Benincasa hispida])

HSP 1 Score: 225.3 bits (573), Expect = 3.2e-55
Identity = 118/141 (83.69%), Postives = 126/141 (89.36%), Query Frame = 0


Query: 1   MDFLSKLGGSTDKPQDQNPDHHQTSASDLLSSARLVADAAKSSFSGGGKDMDKGKVAGAA 60
           MDFLSKLGGS+DKPQDQNPDHH+TSASDL+SSA+LVADAAKSSF GGG  +DKGKVAGAA
Sbjct: 1   MDFLSKLGGSSDKPQDQNPDHHKTSASDLVSSAKLVADAAKSSFGGGGDSVDKGKVAGAA 60

Query: 61  ADLLGAASDYGKLDETKGVGKYVDKAEDYLNQYEKSHSAPQGPGGEPKAEEPPKKENSGE 120
           ADLLGAASDYGKLDETKG+G YVDKAEDYLNQYEKSHSAP G G      EPPK+E + E
Sbjct: 61  ADLLGAASDYGKLDETKGIGMYVDKAEDYLNQYEKSHSAPHGSG-----SEPPKEEKAAE 120

Query: 121 KEEGGSGFGDYLKVAEGFLKK 142
           KE GGSGFGDYLKVAEGFLKK
Sbjct: 121 KEAGGSGFGDYLKVAEGFLKK 136

[Close]

BLAST of Lcy13g003340 vs. NCBI nr
Match: XP_022945442.1 (nodulin-related protein 1-like [Cucurbita moschata] >KAG6574054.1 Nodulin-related protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 217.2 bits (552), Expect = 8.8e-53
Identity = 113/141 (80.14%), Postives = 124/141 (87.94%), Query Frame = 0


Query: 1   MDFLSKLGGSTDKPQDQNPDHHQTSASDLLSSARLVADAAKSSFSGGGKDMDKGKVAGAA 60
           MDFLSKL GS DKP DQNPD+H+ SAS+LLSSARLVADAAKSSF GGG ++DKGK AGA 
Sbjct: 1   MDFLSKLSGSADKPHDQNPDNHKPSASELLSSARLVADAAKSSFGGGGGEVDKGKAAGAG 60

Query: 61  ADLLGAASDYGKLDETKGVGKYVDKAEDYLNQYEKSHSAPQGPGGEPKAEEPPKKENSGE 120
           ADLLGAASDYGKLDETKGVGKYV++AE+YLN+YEKSHSA   P  EPK  EPPKKE SGE
Sbjct: 61  ADLLGAASDYGKLDETKGVGKYVNQAEEYLNKYEKSHSATPVPAAEPKPAEPPKKEESGE 120

Query: 121 KEEGGSGFGDYLKVAEGFLKK 142
           K+ GGSGFGDY+KVAEGFLKK
Sbjct: 121 KDGGGSGFGDYMKVAEGFLKK 141

[Close]

BLAST of Lcy13g003340 vs. NCBI nr
Match: XP_022968319.1 (nodulin-related protein 1-like [Cucurbita maxima])

HSP 1 Score: 216.9 bits (551), Expect = 1.2e-52
Identity = 112/141 (79.43%), Postives = 124/141 (87.94%), Query Frame = 0


Query: 1   MDFLSKLGGSTDKPQDQNPDHHQTSASDLLSSARLVADAAKSSFSGGGKDMDKGKVAGAA 60
           MDFLSKL GS DKPQDQNPD+H+ SAS+LLSSAR+VADAAKSSF G G ++DKGK AGA 
Sbjct: 1   MDFLSKLSGSADKPQDQNPDNHKPSASELLSSARMVADAAKSSFGGSGGEVDKGKAAGAG 60

Query: 61  ADLLGAASDYGKLDETKGVGKYVDKAEDYLNQYEKSHSAPQGPGGEPKAEEPPKKENSGE 120
           ADLLGAASDYGKLDETKGVGKY+++AE+YLN+YEKSHSA   P  EPK  EPPKKE SGE
Sbjct: 61  ADLLGAASDYGKLDETKGVGKYINQAEEYLNKYEKSHSATPVPAAEPKPAEPPKKEESGE 120

Query: 121 KEEGGSGFGDYLKVAEGFLKK 142
           KE GGSGFGDY+KVAEGFLKK
Sbjct: 121 KEGGGSGFGDYMKVAEGFLKK 141

[Close]

BLAST of Lcy13g003340 vs. NCBI nr
Match: XP_022151057.1 (nodulin-related protein 1-like [Momordica charantia] >XP_022157122.1 nodulin-related protein 1-like [Momordica charantia])

HSP 1 Score: 215.7 bits (548), Expect = 2.6e-52
Identity = 118/144 (81.94%), Postives = 124/144 (86.11%), Query Frame = 0


Query: 1   MDFLSKLGGSTDKPQDQNPDHHQTSASDLLSSARLVADAAKSSFSGGGKDMDKGKVAGAA 60
           MD  SKL GSTDKP+D  P+HH+TSASDLLSSA+LVADAAKSSF G    +DKGKVAGAA
Sbjct: 1   MDLFSKLSGSTDKPED--PEHHRTSASDLLSSAKLVADAAKSSFGGESHAVDKGKVAGAA 60

Query: 61  ADLLGAASDYGKLDETKGVGKYVDKAEDYLNQYEKSHSAPQGPGGE---PKAEEPPKKEN 120
           ADLLGAASDYGK DETKG+GKYVDKAEDYLNQYEKSHSAP G   E   PKAEEPPKKEN
Sbjct: 61  ADLLGAASDYGKFDETKGLGKYVDKAEDYLNQYEKSHSAPHGSDAEPKPPKAEEPPKKEN 120

Query: 121 SGEKEEGGSGFGDYLKVAEGFLKK 142
           SGE E GGSGFGDYLKVAEGFLKK
Sbjct: 121 SGEGEHGGSGFGDYLKVAEGFLKK 142

[Close]

BLAST of Lcy13g003340 vs. NCBI nr
Match: XP_004135154.1 (nodulin-related protein 1 [Cucumis sativus] >KGN51963.1 hypothetical protein Csa_008710 [Cucumis sativus])

HSP 1 Score: 213.4 bits (542), Expect = 1.3e-51
Identity = 111/143 (77.62%), Postives = 129/143 (90.21%), Query Frame = 0


Query: 1   MDFLSKLGG-STDKPQDQNPDHHQTSASDLLSSARLVADAAKSSFSGGGKDMDKGKVAGA 60
           MDFL KL   +TDKP+DQNPDHH+TSASDLLSSA+LVADAAKSSF GG + +DKGKVAGA
Sbjct: 1   MDFLKKLSSDATDKPEDQNPDHHKTSASDLLSSAKLVADAAKSSFGGGSESVDKGKVAGA 60

Query: 61  AADLLGAASDYGKLDETKGVGKYVDKAEDYLNQYEKSHSAPQGPGGE-PKAEEPPKKENS 120
           +ADLLGAASDYGKL+ ++G+G YV+KAE+YL+QYEKSHSAP G G E PKAEEPPKKEN+
Sbjct: 61  SADLLGAASDYGKLNPSEGIGSYVEKAENYLHQYEKSHSAPHGSGSEPPKAEEPPKKENA 120

Query: 121 GEKEEGGSGFGDYLKVAEGFLKK 142
            EKE+GGSGFGDYLK+AEGF+KK
Sbjct: 121 AEKEDGGSGFGDYLKMAEGFIKK 143

[Close]

BLAST of Lcy13g003340 vs. TAIR 10
Match: AT1G13930.1 (Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. )

HSP 1 Score: 100.1 bits (248), Expect = 1.5e-21
Identity = 67/152 (44.08%), Postives = 90/152 (59.21%), Query Frame = 0


Query: 2   DFLSKLGGSTDKPQDQNPDHHQTSA-------SDLLSSARLVADAAKSSFSGGGKDMDKG 61
           D + KL  ST +  D N     T         ++L++SA++VA+AA+++       +DKG
Sbjct: 6   DQVKKLSSSTPEEPDHNKPVEGTETATRPATNAELMASAKVVAEAAQAAARNESDKLDKG 65

Query: 62  KVAGAAADLLGAASDYGKLDETKGVGKYVDKAEDYLNQYEKSHSAPQGPGGEP----KAE 121
           KVAGA+AD+L AA  YGK DE    G+Y+DKAE YLN YE SHS   G GG P    +AE
Sbjct: 66  KVAGASADILDAAEKYGKFDEKSSTGQYLDKAEKYLNDYESSHST--GAGGPPPPTSQAE 125

Query: 122 EPPKKENSGEK--EEGGSGFGDYLKVAEGFLK 141
              + E + +K  EE G G G Y K+A+GFLK
Sbjct: 126 PASQPEPAAKKDDEESGGGLGGYAKMAQGFLK 155

[Close]

BLAST of Lcy13g003340 vs. TAIR 10
Match: AT1G13930.3 (Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. )

HSP 1 Score: 100.1 bits (248), Expect = 1.5e-21
Identity = 67/152 (44.08%), Postives = 90/152 (59.21%), Query Frame = 0


Query: 2   DFLSKLGGSTDKPQDQNPDHHQTSA-------SDLLSSARLVADAAKSSFSGGGKDMDKG 61
           D + KL  ST +  D N     T         ++L++SA++VA+AA+++       +DKG
Sbjct: 6   DQVKKLSSSTPEEPDHNKPVEGTETATRPATNAELMASAKVVAEAAQAAARNESDKLDKG 65

Query: 62  KVAGAAADLLGAASDYGKLDETKGVGKYVDKAEDYLNQYEKSHSAPQGPGGEP----KAE 121
           KVAGA+AD+L AA  YGK DE    G+Y+DKAE YLN YE SHS   G GG P    +AE
Sbjct: 66  KVAGASADILDAAEKYGKFDEKSSTGQYLDKAEKYLNDYESSHST--GAGGPPPPTSQAE 125

Query: 122 EPPKKENSGEK--EEGGSGFGDYLKVAEGFLK 141
              + E + +K  EE G G G Y K+A+GFLK
Sbjct: 126 PASQPEPAAKKDDEESGGGLGGYAKMAQGFLK 155

[Close]

BLAST of Lcy13g003340 vs. TAIR 10
Match: AT1G13930.2 (Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. )

HSP 1 Score: 100.1 bits (248), Expect = 1.5e-21
Identity = 67/152 (44.08%), Postives = 90/152 (59.21%), Query Frame = 0


Query: 2   DFLSKLGGSTDKPQDQNPDHHQTSA-------SDLLSSARLVADAAKSSFSGGGKDMDKG 61
           D + KL  ST +  D N     T         ++L++SA++VA+AA+++       +DKG
Sbjct: 6   DQVKKLSSSTPEEPDHNKPVEGTETATRPATNAELMASAKVVAEAAQAAARNESDKLDKG 65

Query: 62  KVAGAAADLLGAASDYGKLDETKGVGKYVDKAEDYLNQYEKSHSAPQGPGGEP----KAE 121
           KVAGA+AD+L AA  YGK DE    G+Y+DKAE YLN YE SHS   G GG P    +AE
Sbjct: 66  KVAGASADILDAAEKYGKFDEKSSTGQYLDKAEKYLNDYESSHST--GAGGPPPPTSQAE 125

Query: 122 EPPKKENSGEK--EEGGSGFGDYLKVAEGFLK 141
              + E + +K  EE G G G Y K+A+GFLK
Sbjct: 126 PASQPEPAAKKDDEESGGGLGGYAKMAQGFLK 155

[Close]

BLAST of Lcy13g003340 vs. TAIR 10
Match: AT2G03440.1 (nodulin-related protein 1 )

HSP 1 Score: 97.4 bits (241), Expect = 9.5e-21
Identity = 62/141 (43.97%), Postives = 89/141 (63.12%), Query Frame = 0


Query: 10  STDKP-QDQNPDHHQTSA-SDLLSSARLVADAAKSSFSGGGKDMDKGKVAGAAADLLGAA 69
           +T KP  + +P  H+ +  ++L++SA++VA+AA+++       +DK KVAGA AD+L AA
Sbjct: 47  TTHKPVSNTDPTTHRPATNAELMASAKIVAEAAQAAARHESDKLDKAKVAGATADILDAA 106

Query: 70  SDYGKLDETKGVGKYVDKAEDYLNQYEKSHS--------APQGPGGEPKAEEPPKKENSG 129
           S YGKLDE  GVG+Y++KAE YL++YE SHS        +    GG       P  +   
Sbjct: 107 SRYGKLDEKSGVGQYLEKAEQYLHKYETSHSHSSTGGTGSHGNVGGHGGGAGAPAAKKED 166

Query: 130 EKEEGGSGFGDYLKVAEGFLK 141
           EK  GG GFGDY K+A+GF+K
Sbjct: 167 EKSGGGHGFGDYAKMAQGFMK 187

The following BLAST results are available for this feature:

BLAST of Lcy13g003340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZQ80	1.3e-19	43.97	Nodulin-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=NRP1 PE=1 SV=1	[more]

BLAST of Lcy13g003340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G0Y4	4.3e-53	80.14	nodulin-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111449671 PE=...	[more]
A0A6J1HZB1	5.6e-53	79.43	nodulin-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111467584 PE=4 ...	[more]
A0A6J1DTQ5	1.2e-52	81.94	nodulin-related protein 1-like OS=Momordica charantia OX=3673 GN=LOC111023921 PE...	[more]
A0A0A0KQS9	6.2e-52	77.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606550 PE=4 SV=1	[more]
A0A5D3D177	5.6e-45	72.41	Nodulin-related protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]

BLAST of Lcy13g003340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893443.1	3.2e-55	83.69	nodulin-related protein 1-like [Benincasa hispida]	[more]
XP_022945442.1	8.8e-53	80.14	nodulin-related protein 1-like [Cucurbita moschata] >KAG6574054.1 Nodulin-relate...	[more]
XP_022968319.1	1.2e-52	79.43	nodulin-related protein 1-like [Cucurbita maxima]	[more]
XP_022151057.1	2.6e-52	81.94	nodulin-related protein 1-like [Momordica charantia] >XP_022157122.1 nodulin-rel...	[more]
XP_004135154.1	1.3e-51	77.62	nodulin-related protein 1 [Cucumis sativus] >KGN51963.1 hypothetical protein Csa...	[more]

BLAST of Lcy13g003340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G13930.1	1.5e-21	44.08	Involved in response to salt stress. Knockout mutants are hypersensitive to sal...	[more]
AT1G13930.3	1.5e-21	44.08	Involved in response to salt stress. Knockout mutants are hypersensitive to sal...	[more]
AT1G13930.2	1.5e-21	44.08	Involved in response to salt stress. Knockout mutants are hypersensitive to sal...	[more]
AT2G03440.1	9.5e-21	43.97	nodulin-related protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..130
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
IPR040294	Nodulin-related protein 1	PANTHER	PTHR35098	EXPRESSED PROTEIN	coord: 114..141 coord: 10..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy13g003340.1	Lcy13g003340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010115	regulation of abscisic acid biosynthetic process
biological_process	GO:0009408	response to heat