Homology
BLAST of Lcy12g021920 vs. ExPASy Swiss-Prot
Match:
Q9SGQ6 (Pentatricopeptide repeat-containing protein At1g76280 OS=Arabidopsis thaliana OX=3702 GN=At1g76280 PE=2 SV=2)
HSP 1 Score: 716.1 bits (1847), Expect = 4.7e-205
Identity = 385/771 (49.94%), Postives = 514/771 (66.67%), Query Frame = 0
Query: 76 ESTKFMQMQIVDALRLGDRSSASNLLMELGQEKHSSTADNFVRILSYCARSPDPLFVMET 135
+ +K +Q+QIVDALR G+R AS LL +L Q +S +AD+F IL YCARSPDP+FVMET
Sbjct: 59 DESKILQLQIVDALRSGERQGASALLFKLIQGNYSLSADDFHDILYYCARSPDPVFVMET 118
Query: 136 WKIMEERGIFLNNTCSVLMIEALCKGGYLDEAFGLINFLAESHVMFPVLPVYNCFLRACS 195
+ +M ++ I L++ + ++++LC GG+LD+A I+ + E + P+LP+YN FL AC+
Sbjct: 119 YSVMCKKEISLDSRSLLFIVKSLCNGGHLDKASEFIHAVREDDRISPLLPIYNFFLGACA 178
Query: 196 KRQSTVHVSQCLDLMDHRMVGKNEATYSELLKLAVCQKNLSSVHEIWTDFVKNYSPSVLS 255
+ +S H S+CL+LMD R VGKN TY LLKLAV Q+NLS+V++IW +V +Y+ +LS
Sbjct: 179 RTRSVYHASKCLELMDQRRVGKNGITYVALLKLAVFQRNLSTVNDIWKHYVNHYNLDILS 238
Query: 256 LRKFIWSYTRLGDLKSAYIALQKMVSLA------IGAAGGKLPSLELDIPIPSRTEFYHN 315
LR+FIWS+TRLGDLKSAY LQ MV LA + + GKL S L IP+PS+ E
Sbjct: 239 LRRFIWSFTRLGDLKSAYELLQHMVYLALRGEFFVKSNRGKLHSTRLYIPVPSKDETGSE 298
Query: 316 NFYFDENGHSADELFCKKMVPCDGDIGQFSVNGMKCGAVESGPLTLQKNCKNSFVIKVLR 375
F F ++V C+ S + L K I+VLR
Sbjct: 299 KFAFG---------VTDRIVDCN----------------SSSKVALPKGHNKILAIRVLR 358
Query: 376 WSFNDVIHTCALTRNCGLAEQLMQQMHELGLEPSCHTFDGFVRSVVSERGFSDGMKILKI 435
WSFNDVIH C ++N LAEQLM Q LK+
Sbjct: 359 WSFNDVIHACGQSKNSELAEQLMLQ--------------------------------LKV 418
Query: 436 MQQRKLKPYDSTLAAVSISCSKALEIDLAEALLEQISACPYPHPFNAFLSACDTMDQPER 495
MQQ+ LKPYDSTLA V+ CSKAL++DLAE LL+QIS C Y +PFN L+A D++DQPER
Sbjct: 419 MQQQNLKPYDSTLATVAAYCSKALQVDLAEHLLDQISECSYSYPFNNLLAAYDSLDQPER 478
Query: 496 AMRMLVKMKQMKVLPDVKTYELLYSLFGNVNAPYEDGNRLSQVDAAKRIRMIEMDMTKHG 555
A+R+L +MK++K+ PD++TYELL+SLFGNVNAPYE+GN LSQVD KRI IEMDM ++G
Sbjct: 479 AVRVLARMKELKLRPDMRTYELLFSLFGNVNAPYEEGNMLSQVDCCKRINAIEMDMMRNG 538
Query: 556 IQHSHLSMMNLLKALGAEGMTKELLQYLNVAENLFYYNNTHLGTPIYNTVLHFFVESKEI 615
QHS +S +N+L+ALGAEGM E++++L AENL ++N +LGTP YN VLH +E+ E
Sbjct: 539 FQHSPISRLNVLRALGAEGMVNEMIRHLQKAENLSAHSNMYLGTPTYNIVLHSLLEANET 598
Query: 616 HMAIELFNNMKHSGFFPDAATFEMMIDCCSVMGCWKSAFSLLSMMIRSGFCPQILTYTGL 675
M I +F MK G D AT+ +MIDCCS++ +KSA +L+SMMIR GF P+ +T+T L
Sbjct: 599 DMVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACALVSMMIRDGFSPKAVTFTAL 658
Query: 676 VKIVLGFEKFDDALNLLDHANSEGIELDVVIMNTILQKACEKGRIDVIEFVVERMSRENI 735
+KI+L F++ALNLLD A E I LDV+ NTIL+KA EKG IDVIE++VE+M RE +
Sbjct: 659 MKILLNDANFEEALNLLDQAALEEIHLDVLSYNTILRKAFEKGMIDVIEYIVEQMHREKV 718
Query: 736 QPDPSTCHSVFSAYVNLGYHNTAMEALQVLSMHMLYKDDDAS--PDLTDYFENFVLAEDS 795
PDP+TCH VFS YV GYH TA+EAL VLS+ ML ++D S + ENFV++ED
Sbjct: 719 NPDPTTCHYVFSCYVEKGYHATAIEALNVLSLRMLNEEDKESLQDKKIELEENFVMSEDP 772
Query: 796 EVDSRILEFFQCSEENLSFALFNLRWSAMLGYSLCSSPNQSPWAMRLASSY 839
E +++I+E F+ SEE+L+ AL NLRW AMLG + S +QSPWA L++ Y
Sbjct: 779 EAETKIIELFRKSEEHLAAALLNLRWCAMLGGRIIWSEDQSPWARALSNKY 772
BLAST of Lcy12g021920 vs. ExPASy Swiss-Prot
Match:
Q9LSL9 (Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX=3702 GN=At5g65560 PE=2 SV=1)
HSP 1 Score: 89.7 bits (221), Expect = 1.7e-16
Identity = 71/373 (19.03%), Postives = 159/373 (42.63%), Query Frame = 0
Query: 370 WSFNDVIHTCALTRNCGLAEQLMQQMHELGLEPSCHTFDGFVRSVVSERGFSDGMKILKI 429
+++N +++ N A Q + ++ E GL+P T+ + + K+
Sbjct: 219 YTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNE 278
Query: 430 MQQRKLKPYDSTLAAVSISCSKALEIDLAEAL---LEQISACPYPHPFNAFLSACDTMDQ 489
M + + + + A ID A L ++ P + + + ++
Sbjct: 279 MPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSER 338
Query: 490 PERAMRMLVKMKQMKVLPDVKTYELLYSLFGNVNAPYEDGNRLSQVDAAKRIRMIEMDMT 549
A+ ++ +M++ + P++ TY +L + L ++ R + M
Sbjct: 339 KSEALNLVKEMEETGIKPNIHTYTVLI-------------DSLCSQCKFEKARELLGQML 398
Query: 550 KHGIQHSHLSMMNLLKALGAEGMTKELLQYLNVAENLFYYNNTHLGTPIYNTVLHFFVES 609
+ G+ + ++ L+ GM ++ + + + E+ NT YN ++ + +S
Sbjct: 399 EKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTR----TYNELIKGYCKS 458
Query: 610 KEIHMAIELFNNMKHSGFFPDAATFEMMIDCCSVMGCWKSAFSLLSMMIRSGFCPQILTY 669
+H A+ + N M PD T+ +ID G + SA+ LLS+M G P TY
Sbjct: 459 -NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTY 518
Query: 670 TGLVKIVLGFEKFDDALNLLDHANSEGIELDVVIMNTILQKACEKGRIDVIEFVVERMSR 729
T ++ + ++ ++A +L D +G+ +VV+ ++ C+ G++D ++E+M
Sbjct: 519 TSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLS 573
Query: 730 ENIQPDPSTCHSV 740
+N P+ T +++
Sbjct: 579 KNCLPNSLTFNAL 573
BLAST of Lcy12g021920 vs. ExPASy Swiss-Prot
Match:
Q76C99 (Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV=1)
HSP 1 Score: 88.2 bits (217), Expect = 4.9e-16
Identity = 83/352 (23.58%), Postives = 152/352 (43.18%), Query Frame = 0
Query: 408 DGFVRSVVSERGFSDGMKILKIMQQRKLKPYDSTLAAVSISCSKALEIDLAEALLEQI-- 467
+GF + S++ +S ++L R + P T ++ + KA +D A +L +
Sbjct: 204 NGFFKEGDSDKAYSTYHEML----DRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVK 263
Query: 468 -SACPYPHPFNAFLSACDTMDQPERAMRMLVKMKQMKVLPDVKTYELLYSLFGNVNAPYE 527
P +N+ L + QP+ A+ L KM+ V PDV TY LL
Sbjct: 264 NGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLM----------- 323
Query: 528 DGNRLSQVDAAKRIRMIEMDMTKHGIQHSHLSMMNLLKALGAEGMTKELLQYLNVAENLF 587
+ L + R I MTK G++ + LL+ +G E+ L +L
Sbjct: 324 --DYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL----DLM 383
Query: 588 YYNNTHLGTPIYNTVLHFFVESKEIHMAIELFNNMKHSGFFPDAATFEMMIDCCSVMGCW 647
N H +++ ++ + + ++ A+ +F+ M+ G P+A T+ +I G
Sbjct: 384 VRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRV 443
Query: 648 KSAFSLLSMMIRSGFCPQILTYTGLVKIVLGFEKFDDALNLLDHANSEGIELDVVIMNTI 707
+ A MI G P + Y L+ + K++ A L+ GI L+ + N+I
Sbjct: 444 EDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSI 503
Query: 708 LQKACEKGRIDVIEFVVERMSRENIQPDPSTCHSVFSAYVNLGYHNTAMEAL 757
+ C++GR+ E + E M R ++P+ T +++ + Y G + AM+ L
Sbjct: 504 IDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLL 534
BLAST of Lcy12g021920 vs. ExPASy Swiss-Prot
Match:
Q9LYZ9 (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX=3702 GN=At5g02860 PE=2 SV=1)
HSP 1 Score: 84.0 bits (206), Expect = 9.1e-15
Identity = 86/354 (24.29%), Postives = 138/354 (38.98%), Query Frame = 0
Query: 462 LEQISACPYPHPFNAFLSACDTMDQPERAMRMLV-KMKQMKVLPDVKTYELLYSLFGNVN 521
+E+ P +N L+ M P + LV KMK + PD TY L + +
Sbjct: 234 MEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGS 293
Query: 522 APYEDGNRLSQVDAAKRIRMIEMDMTKHGIQHSHLSMMNLLKALGAEGMTKELLQYLNVA 581
E ++ AA G + ++ LL G KE ++ LN
Sbjct: 294 LHQEAAQVFEEMKAA-------------GFSYDKVTYNALLDVYGKSHRPKEAMKVLNE- 353
Query: 582 ENLFYYNNTHLGTPIYNTVLHFFVESKEIHMAIELFNNMKHSGFFPDAATFEMMIDCCSV 641
N YN+++ + + A+EL N M G PD T+ ++
Sbjct: 354 ---MVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFER 413
Query: 642 MGCWKSAFSLLSMMIRSGFCPQILTYTGLVKIVLGFEKFDDALNLLDHANSEGIELDVVI 701
G +SA S+ M +G P I T+ +K+ KF + + + D N G+ D+V
Sbjct: 414 AGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVT 473
Query: 702 MNTILQKACEKGRIDVIEFVVERMSRENIQPDPSTCHSVFSAYVNLGYHNTAMEALQVLS 761
NT+L + G + V + M R P+ T +++ SAY G AM +
Sbjct: 474 WNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAM------T 533
Query: 762 MHMLYKDDDASPDLTDYFENFVLA--------EDSEVDSRILEFFQCSEENLSF 807
++ D +PDL+ Y N VLA E SE +E +C L++
Sbjct: 534 VYRRMLDAGVTPDLSTY--NTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTY 562
BLAST of Lcy12g021920 vs. ExPASy Swiss-Prot
Match:
Q9M302 (Pentatricopeptide repeat-containing protein At3g48810 OS=Arabidopsis thaliana OX=3702 GN=At3g48810 PE=2 SV=1)
HSP 1 Score: 82.8 bits (203), Expect = 2.0e-14
Identity = 75/360 (20.83%), Postives = 147/360 (40.83%), Query Frame = 0
Query: 372 FNDVIHTCALTRNCGLAEQLMQQMHELGLEPSCHTFDGFVRSVVSERGFSDGMKILKIMQ 431
+N V+ T + + + M G EP+ T++ ++++ K+L M
Sbjct: 149 YNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMS 208
Query: 432 QRKLKPYDSTLAAVSISCSKALEIDLAEALLEQISACPYPHPFNAFLSACDTMDQPERAM 491
+ P + V S + + L E+ P +NA ++ + A
Sbjct: 209 NKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFE--PVVSVYNALINGLCKEHDYKGAF 268
Query: 492 RMLVKMKQMKVLPDVKTYELLYSLFGNVNAPYEDGNRLSQVDAAKRIRMIEMDMTKHGIQ 551
++ +M + + P+V +Y L ++ N Q++ A M K G
Sbjct: 269 ELMREMVEKGISPNVISYSTLINVLCN----------SGQIELAFSFL---TQMLKRGCH 328
Query: 552 HSHLSMMNLLKALGAEGMTKELLQYLNVAENLFYYNNTHLGTPIYNTVLHFFVESKEIHM 611
+ ++ +L+K G T + L N F YNT++ F I
Sbjct: 329 PNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGF---GLQPNVVAYNTLVQGFCSHGNIVK 388
Query: 612 AIELFNNMKHSGFFPDAATFEMMIDCCSVMGCWKSAFSLLSMMIRSGFCPQILTYTGLVK 671
A+ +F++M+ G P+ T+ +I+ + G A + + M+ SG CP ++ YT +V+
Sbjct: 389 AVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVE 448
Query: 672 IVLGFEKFDDALNLLDHANSEGIELDVVIMNTILQKACEKGRIDVIEFVVERMSRENIQP 731
+ KF +A +L++ + E V N ++ C+ GR+D E V +M +++ P
Sbjct: 449 ALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCP 490
BLAST of Lcy12g021920 vs. ExPASy TrEMBL
Match:
A0A6J1BT64 (pentatricopeptide repeat-containing protein At1g76280 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005486 PE=4 SV=1)
HSP 1 Score: 1451.0 bits (3755), Expect = 0.0e+00
Identity = 719/820 (87.68%), Postives = 765/820 (93.29%), Query Frame = 0
Query: 25 MHRARYRFGSIADSLYRFKPHEHGRRQDASKLVFHRALLVSKDSEFLGNGAESTKFMQMQ 84
MHRA R GSIADSLYRFKPHEHGR+Q +SKL FHR LL+SKDSEFLGNGAE+TKFMQMQ
Sbjct: 1 MHRATSRLGSIADSLYRFKPHEHGRQQASSKLAFHRTLLISKDSEFLGNGAETTKFMQMQ 60
Query: 85 IVDALRLGDRSSASNLLMELGQEKHSSTADNFVRILSYCARSPDPLFVMETWKIMEERGI 144
IVDALRLGDRSSASNLLMELGQEKHS TADNFVRILSYCA SPDPLFVMETW+IME+RGI
Sbjct: 61 IVDALRLGDRSSASNLLMELGQEKHSLTADNFVRILSYCAGSPDPLFVMETWRIMEDRGI 120
Query: 145 FLNNTCSVLMIEALCKGGYLDEAFGLINFLAESHVMFPVLPVYNCFLRACSKRQSTVHVS 204
FLNNTCS+LMIEALCKGGYLDEAFGLINFLAES VMFPVLPVYNCFLRAC K QSTVHV
Sbjct: 121 FLNNTCSLLMIEALCKGGYLDEAFGLINFLAESRVMFPVLPVYNCFLRACVKMQSTVHVG 180
Query: 205 QCLDLMDHRMVGKNEATYSELLKLAVCQKNLSSVHEIWTDFVKNYSPSVLSLRKFIWSYT 264
QCLDLMDHRMVGKNEATYSELLKLAV Q+NLSSVHEIWTDFVKNYSPSVLSLRKFIWSY
Sbjct: 181 QCLDLMDHRMVGKNEATYSELLKLAVFQQNLSSVHEIWTDFVKNYSPSVLSLRKFIWSYA 240
Query: 265 RLGDLKSAYIALQKMVSLAIGAAGGKLPSLELDIPIPSRTEFYHNNFYFDENGHSADELF 324
RLGDLKSA I+LQKMV+LA+GAAGGKLPSLELDIPIPS TEFY NNF F++N HS+DEL+
Sbjct: 241 RLGDLKSACISLQKMVALAVGAAGGKLPSLELDIPIPSSTEFYRNNFSFEDNEHSSDELY 300
Query: 325 CKKMVPCDGDIGQFSVNGMKCGAVESGPLTLQKNCKNSFVIKVLRWSFNDVIHTCALTRN 384
KK+V CD DIGQFSVNGMKCG ESGPLT Q NC++SFV+KVLRWSFNDVIH CA TR+
Sbjct: 301 RKKLVTCDDDIGQFSVNGMKCGD-ESGPLTFQNNCRSSFVMKVLRWSFNDVIHACAFTRD 360
Query: 385 CGLAEQLMQQMHELGLEPSCHTFDGFVRSVVSERGFSDGMKILKIMQQRKLKPYDSTLAA 444
CGLAEQLMQQM +LGL+PSCHTFDGFVRSVVSERGFSDGMKILKIMQQRKLKPYDSTLAA
Sbjct: 361 CGLAEQLMQQMLDLGLQPSCHTFDGFVRSVVSERGFSDGMKILKIMQQRKLKPYDSTLAA 420
Query: 445 VSISCSKALEIDLAEALLEQISACPYPHPFNAFLSACDTMDQPERAMRMLVKMKQMKVLP 504
VSISCSKALE+DLAEALLEQISACPYPHPFNAFL ACDTMDQPERAMRMLVKMKQ+KVLP
Sbjct: 421 VSISCSKALELDLAEALLEQISACPYPHPFNAFLKACDTMDQPERAMRMLVKMKQLKVLP 480
Query: 505 DVKTYELLYSLFGNVNAPYEDGNRLSQVDAAKRIRMIEMDMTKHGIQHSHLSMMNLLKAL 564
+V TYE LYSLFGNVNAPYE+GNRLSQ DA KRIRMIEMDM KHGIQHS+LSM NLLKAL
Sbjct: 481 NVNTYEHLYSLFGNVNAPYEEGNRLSQADAGKRIRMIEMDMAKHGIQHSNLSMTNLLKAL 540
Query: 565 GAEGMTKELLQYLNVAENLFYYNNTHLGTPIYNTVLHFFVESKEIHMAIELFNNMKHSGF 624
GAEGMTKELLQYL+VAENLFYYNNT+LGTP+YNTVLHF VESKEIHMAIELFNNMKHSGF
Sbjct: 541 GAEGMTKELLQYLSVAENLFYYNNTYLGTPVYNTVLHFLVESKEIHMAIELFNNMKHSGF 600
Query: 625 FPDAATFEMMIDCCSVMGCWKSAFSLLSMMIRSGFCPQILTYTGLVKIVLGFEKFDDALN 684
FPDAATFEMM+DCCSVM C KSAF+LLSMM+R+GFCPQILTYT LVKIVL E FDDALN
Sbjct: 601 FPDAATFEMMVDCCSVMECLKSAFALLSMMVRTGFCPQILTYTSLVKIVLRSEGFDDALN 660
Query: 685 LLDHANSEGIELDVVIMNTILQKACEKGRIDVIEFVVERMSRENIQPDPSTCHSVFSAYV 744
LLD A+SEGI+LDVVIMNTIL KACEKGR+DVIEFV+ERM+RE IQPDPSTCHSVFSAYV
Sbjct: 661 LLDQASSEGIQLDVVIMNTILLKACEKGRVDVIEFVIERMNREKIQPDPSTCHSVFSAYV 720
Query: 745 NLGYHNTAMEALQVLSMHMLYKDDDASPDLTDYFENFVLAEDSEVDSRILEFFQCSEENL 804
NLGYH+TAMEALQVLSM ML K++DASPDLT+Y ENFVLAED D RILEFF+CSEE+L
Sbjct: 721 NLGYHSTAMEALQVLSMRMLSKEEDASPDLTEYVENFVLAEDPGADLRILEFFKCSEESL 780
Query: 805 SFALFNLRWSAMLGYSLCSSPNQSPWAMRLASSYDGNRIS 845
SFALFNLRWSAMLGYSLCSSPNQSPWAMRLA+SYD NR S
Sbjct: 781 SFALFNLRWSAMLGYSLCSSPNQSPWAMRLANSYDANRSS 819
BLAST of Lcy12g021920 vs. ExPASy TrEMBL
Match:
A0A6J1F9C6 (pentatricopeptide repeat-containing protein At1g76280 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443493 PE=4 SV=1)
HSP 1 Score: 1434.1 bits (3711), Expect = 0.0e+00
Identity = 712/815 (87.36%), Postives = 762/815 (93.50%), Query Frame = 0
Query: 25 MHRARYRFGSIADSLYRFKPHEHGRRQDASKLVFHRALLVSKDSEFLGNGAESTKFMQMQ 84
MHRAR R GSIADSLYRF+PHEHGR+QDA+K+VF RALL+S+ E+LGN AESTKFMQ Q
Sbjct: 1 MHRARLRLGSIADSLYRFRPHEHGRKQDANKMVFRRALLISQGIEYLGNEAESTKFMQRQ 60
Query: 85 IVDALRLGDRSSASNLLMELGQEKHSSTADNFVRILSYCARSPDPLFVMETWKIMEERGI 144
IVDALR+GDRSSASNLLMELGQEKHS TADNFV ILSYCARSPDPLFVMETWKIMEERG+
Sbjct: 61 IVDALRVGDRSSASNLLMELGQEKHSLTADNFVGILSYCARSPDPLFVMETWKIMEERGV 120
Query: 145 FLNNTCSVLMIEALCKGGYLDEAFGLINFLAESHVMFPVLPVYNCFLRACSKRQSTVHVS 204
FL+NTC++LMI+ALCKGGYLDEAFGLI+FLAES VMFPVLPVYN FLRAC KRQSTVHVS
Sbjct: 121 FLDNTCTLLMIKALCKGGYLDEAFGLISFLAESRVMFPVLPVYNLFLRACGKRQSTVHVS 180
Query: 205 QCLDLMDHRMVGKNEATYSELLKLAVCQKNLSSVHEIWTDFVKNYSPSVLSLRKFIWSYT 264
QCLD+MD RMVGKNEATYSELLK+AVCQKNLSSVHEIWTDFVKNYSPSVLSLRKFIW YT
Sbjct: 181 QCLDIMDRRMVGKNEATYSELLKVAVCQKNLSSVHEIWTDFVKNYSPSVLSLRKFIWCYT 240
Query: 265 RLGDLKSAYIALQKMVSLAIGAAGGKLPSLELDIPIPSRTEFYHNNFYFDENGHSADELF 324
RLGDLKSA+ ALQKMV+L IGAAG KLPSLELDIP+P RTEFYH+NF F+ENG S DE++
Sbjct: 241 RLGDLKSAHTALQKMVALVIGAAGQKLPSLELDIPVPLRTEFYHDNFNFEENGPSTDEVY 300
Query: 325 CKKMVPCDGDIGQFSVNGMKCGAVESGPLTLQKNCKNSFVIKVLRWSFNDVIHTCALTRN 384
CKKMVPC+GDI QFSVNGMKCG VESG TL N +++FV+KVLRWSFNDVI CALTRN
Sbjct: 301 CKKMVPCEGDIEQFSVNGMKCGEVESG-RTLPSNYRSNFVMKVLRWSFNDVICACALTRN 360
Query: 385 CGLAEQLMQQMHELGLEPSCHTFDGFVRSVVSERGFSDGMKILKIMQQRKLKPYDSTLAA 444
CGLAEQLMQQMHELGL+PS HTFDGFVRSVVSERGFSDG+KILKIMQQRKLKPYDSTLAA
Sbjct: 361 CGLAEQLMQQMHELGLQPSSHTFDGFVRSVVSERGFSDGIKILKIMQQRKLKPYDSTLAA 420
Query: 445 VSISCSKALEIDLAEALLEQISACPYPHPFNAFLSACDTMDQPERAMRMLVKMKQMKVLP 504
VSISCSKALE+DLAEALLEQISAC YPHPFNAFLSACD MDQPERAMRML KMKQM+VLP
Sbjct: 421 VSISCSKALELDLAEALLEQISACVYPHPFNAFLSACDMMDQPERAMRMLAKMKQMEVLP 480
Query: 505 DVKTYELLYSLFGNVNAPYEDGNRLSQVDAAKRIRMIEMDMTKHGIQHSHLSMMNLLKAL 564
DVKTYELLYSLFGNVNAPYE+GNRLSQVDAAKRIRMIEMDM KHGIQHSH SMMNLLKAL
Sbjct: 481 DVKTYELLYSLFGNVNAPYEEGNRLSQVDAAKRIRMIEMDMEKHGIQHSHFSMMNLLKAL 540
Query: 565 GAEGMTKELLQYLNVAENLFYYNNTHLGTPIYNTVLHFFVESKEIHMAIELFNNMKHSGF 624
GAEGMTKELLQYLNVAENLFYYNNT LGTPIYNT LHF VESKEIHMAIELFNNMKHSG
Sbjct: 541 GAEGMTKELLQYLNVAENLFYYNNTWLGTPIYNTALHFLVESKEIHMAIELFNNMKHSGL 600
Query: 625 FPDAATFEMMIDCCSVMGCWKSAFSLLSMMIRSGFCPQILTYTGLVKIVLGFEKFDDALN 684
FPDAATFEMMIDCCSV+GC KSAF+LLS+MIRSGFCPQILTYT LVKIVLGFE+FDDALN
Sbjct: 601 FPDAATFEMMIDCCSVIGCLKSAFALLSLMIRSGFCPQILTYTSLVKIVLGFERFDDALN 660
Query: 685 LLDHANSEGIELDVVIMNTILQKACEKGRIDVIEFVVERMSRENIQPDPSTCHSVFSAYV 744
LLD A+SEGIELDVVIMNTI+QKACEKGRIDVIEFVVE+M R+ IQPDPSTCHSVFSAYV
Sbjct: 661 LLDQASSEGIELDVVIMNTIVQKACEKGRIDVIEFVVEKMKRKKIQPDPSTCHSVFSAYV 720
Query: 745 NLGYHNTAMEALQVLSMHMLYKDDDASPDLTDYFENFVLAEDSEVDSRILEFFQCSEENL 804
+LGYH+TAMEALQVLSM ML K+ D SP +T+Y E+FVLAEDSE +SRILEFF+CSEE+L
Sbjct: 721 SLGYHSTAMEALQVLSMRMLCKEQDTSPVVTEYVEDFVLAEDSEAESRILEFFKCSEESL 780
Query: 805 SFALFNLRWSAMLGYSLCSSPNQSPWAMRLASSYD 840
SFAL NLRWSAMLGYSLCSSPNQSPWAMRLASSYD
Sbjct: 781 SFALLNLRWSAMLGYSLCSSPNQSPWAMRLASSYD 814
BLAST of Lcy12g021920 vs. ExPASy TrEMBL
Match:
A0A6J1IFV2 (pentatricopeptide repeat-containing protein At1g76280 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111476573 PE=4 SV=1)
HSP 1 Score: 1429.8 bits (3700), Expect = 0.0e+00
Identity = 711/815 (87.24%), Postives = 759/815 (93.13%), Query Frame = 0
Query: 25 MHRARYRFGSIADSLYRFKPHEHGRRQDASKLVFHRALLVSKDSEFLGNGAESTKFMQMQ 84
MHRAR R GSIADSLYRF+PHEHGR+QDA+K+VF RALL+S+ E+LGN AESTKFMQ Q
Sbjct: 1 MHRARLRLGSIADSLYRFRPHEHGRKQDANKMVFRRALLISQGIEYLGNEAESTKFMQRQ 60
Query: 85 IVDALRLGDRSSASNLLMELGQEKHSSTADNFVRILSYCARSPDPLFVMETWKIMEERGI 144
IVDALR+GDRSSASNLLMELGQEKHS TADNFV ILSYCARSPDPLFVMETWKIMEERG+
Sbjct: 61 IVDALRVGDRSSASNLLMELGQEKHSLTADNFVGILSYCARSPDPLFVMETWKIMEERGV 120
Query: 145 FLNNTCSVLMIEALCKGGYLDEAFGLINFLAESHVMFPVLPVYNCFLRACSKRQSTVHVS 204
FL+NTC++LMI+ALCKGGYLDEAFGLI+FLAES VMFPVLPVYN FLRAC KRQSTVHVS
Sbjct: 121 FLDNTCTLLMIKALCKGGYLDEAFGLISFLAESRVMFPVLPVYNLFLRACGKRQSTVHVS 180
Query: 205 QCLDLMDHRMVGKNEATYSELLKLAVCQKNLSSVHEIWTDFVKNYSPSVLSLRKFIWSYT 264
QCLD+MD RMVGKNEATYSELLK+AV QKNLSSVHEIWTDFVKNYSPSVLSLRKFIWSYT
Sbjct: 181 QCLDMMDRRMVGKNEATYSELLKVAVGQKNLSSVHEIWTDFVKNYSPSVLSLRKFIWSYT 240
Query: 265 RLGDLKSAYIALQKMVSLAIGAAGGKLPSLELDIPIPSRTEFYHNNFYFDENGHSADELF 324
RLGDLKSAY ALQKMV+L IGAAG KL SLELDIP+P RTEFYH+NF F+ENG S DEL+
Sbjct: 241 RLGDLKSAYTALQKMVTLVIGAAGQKLSSLELDIPVPLRTEFYHDNFNFEENGPSTDELY 300
Query: 325 CKKMVPCDGDIGQFSVNGMKCGAVESGPLTLQKNCKNSFVIKVLRWSFNDVIHTCALTRN 384
CKK+VPC+GDI QFSVNGMKCG VESG LTL N +++FV+KVLRWSFNDVI CA TRN
Sbjct: 301 CKKVVPCEGDIWQFSVNGMKCGEVESGRLTLPSNYRSNFVMKVLRWSFNDVICACARTRN 360
Query: 385 CGLAEQLMQQMHELGLEPSCHTFDGFVRSVVSERGFSDGMKILKIMQQRKLKPYDSTLAA 444
CGLAEQLMQQMHELGL+PS HTFDGFVRSVVSERGFSDG+KILKIMQQRKLKPYDSTLAA
Sbjct: 361 CGLAEQLMQQMHELGLQPSSHTFDGFVRSVVSERGFSDGIKILKIMQQRKLKPYDSTLAA 420
Query: 445 VSISCSKALEIDLAEALLEQISACPYPHPFNAFLSACDTMDQPERAMRMLVKMKQMKVLP 504
VSISCSKALE+DLAEALLEQISAC YPHPFNAFLSACD MDQPERAMRML KMKQM+VLP
Sbjct: 421 VSISCSKALELDLAEALLEQISACVYPHPFNAFLSACDMMDQPERAMRMLAKMKQMEVLP 480
Query: 505 DVKTYELLYSLFGNVNAPYEDGNRLSQVDAAKRIRMIEMDMTKHGIQHSHLSMMNLLKAL 564
DVKTYELLYSLFGNVNAPYE+GNRLSQVDAAKRIRMIEMDM KHGIQHSH SMMNLLKAL
Sbjct: 481 DVKTYELLYSLFGNVNAPYEEGNRLSQVDAAKRIRMIEMDMEKHGIQHSHFSMMNLLKAL 540
Query: 565 GAEGMTKELLQYLNVAENLFYYNNTHLGTPIYNTVLHFFVESKEIHMAIELFNNMKHSGF 624
GAEGMTKELLQYLNVAENLFYYNNT LGTPIYNT LHF VESKEIHMA ELFNNMKHSG
Sbjct: 541 GAEGMTKELLQYLNVAENLFYYNNTCLGTPIYNTALHFLVESKEIHMATELFNNMKHSGL 600
Query: 625 FPDAATFEMMIDCCSVMGCWKSAFSLLSMMIRSGFCPQILTYTGLVKIVLGFEKFDDALN 684
FPDAATFEMMIDCCSV+GC KSAF+LLS+MIRSGFCPQILTYT LVKIVLGFE+FDDALN
Sbjct: 601 FPDAATFEMMIDCCSVIGCLKSAFALLSLMIRSGFCPQILTYTSLVKIVLGFERFDDALN 660
Query: 685 LLDHANSEGIELDVVIMNTILQKACEKGRIDVIEFVVERMSRENIQPDPSTCHSVFSAYV 744
LLD A+SEGIELDVVIMNTI+QKACEKGRIDVIEFVVE+M RE IQPDPSTCHSVFSAYV
Sbjct: 661 LLDQASSEGIELDVVIMNTIVQKACEKGRIDVIEFVVEKMKREKIQPDPSTCHSVFSAYV 720
Query: 745 NLGYHNTAMEALQVLSMHMLYKDDDASPDLTDYFENFVLAEDSEVDSRILEFFQCSEENL 804
+LGYH+TAMEALQVLSM ML K+ D SP +T+Y E+FVLAEDSE +SRILEFF+CSEE+L
Sbjct: 721 SLGYHSTAMEALQVLSMRMLCKEHDTSPVVTEYVEDFVLAEDSEAESRILEFFKCSEESL 780
Query: 805 SFALFNLRWSAMLGYSLCSSPNQSPWAMRLASSYD 840
SFAL NLRWSAMLGYSLCSS NQSPWAMRLASSYD
Sbjct: 781 SFALLNLRWSAMLGYSLCSSTNQSPWAMRLASSYD 815
BLAST of Lcy12g021920 vs. ExPASy TrEMBL
Match:
A0A6J1BUK2 (pentatricopeptide repeat-containing protein At1g76280 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111005486 PE=4 SV=1)
HSP 1 Score: 1357.4 bits (3512), Expect = 0.0e+00
Identity = 673/764 (88.09%), Postives = 715/764 (93.59%), Query Frame = 0
Query: 81 MQMQIVDALRLGDRSSASNLLMELGQEKHSSTADNFVRILSYCARSPDPLFVMETWKIME 140
MQMQIVDALRLGDRSSASNLLMELGQEKHS TADNFVRILSYCA SPDPLFVMETW+IME
Sbjct: 1 MQMQIVDALRLGDRSSASNLLMELGQEKHSLTADNFVRILSYCAGSPDPLFVMETWRIME 60
Query: 141 ERGIFLNNTCSVLMIEALCKGGYLDEAFGLINFLAESHVMFPVLPVYNCFLRACSKRQST 200
+RGIFLNNTCS+LMIEALCKGGYLDEAFGLINFLAES VMFPVLPVYNCFLRAC K QST
Sbjct: 61 DRGIFLNNTCSLLMIEALCKGGYLDEAFGLINFLAESRVMFPVLPVYNCFLRACVKMQST 120
Query: 201 VHVSQCLDLMDHRMVGKNEATYSELLKLAVCQKNLSSVHEIWTDFVKNYSPSVLSLRKFI 260
VHV QCLDLMDHRMVGKNEATYSELLKLAV Q+NLSSVHEIWTDFVKNYSPSVLSLRKFI
Sbjct: 121 VHVGQCLDLMDHRMVGKNEATYSELLKLAVFQQNLSSVHEIWTDFVKNYSPSVLSLRKFI 180
Query: 261 WSYTRLGDLKSAYIALQKMVSLAIGAAGGKLPSLELDIPIPSRTEFYHNNFYFDENGHSA 320
WSY RLGDLKSA I+LQKMV+LA+GAAGGKLPSLELDIPIPS TEFY NNF F++N HS+
Sbjct: 181 WSYARLGDLKSACISLQKMVALAVGAAGGKLPSLELDIPIPSSTEFYRNNFSFEDNEHSS 240
Query: 321 DELFCKKMVPCDGDIGQFSVNGMKCGAVESGPLTLQKNCKNSFVIKVLRWSFNDVIHTCA 380
DEL+ KK+V CD DIGQFSVNGMKCG ESGPLT Q NC++SFV+KVLRWSFNDVIH CA
Sbjct: 241 DELYRKKLVTCDDDIGQFSVNGMKCGD-ESGPLTFQNNCRSSFVMKVLRWSFNDVIHACA 300
Query: 381 LTRNCGLAEQLMQQMHELGLEPSCHTFDGFVRSVVSERGFSDGMKILKIMQQRKLKPYDS 440
TR+CGLAEQLMQQM +LGL+PSCHTFDGFVRSVVSERGFSDGMKILKIMQQRKLKPYDS
Sbjct: 301 FTRDCGLAEQLMQQMLDLGLQPSCHTFDGFVRSVVSERGFSDGMKILKIMQQRKLKPYDS 360
Query: 441 TLAAVSISCSKALEIDLAEALLEQISACPYPHPFNAFLSACDTMDQPERAMRMLVKMKQM 500
TLAAVSISCSKALE+DLAEALLEQISACPYPHPFNAFL ACDTMDQPERAMRMLVKMKQ+
Sbjct: 361 TLAAVSISCSKALELDLAEALLEQISACPYPHPFNAFLKACDTMDQPERAMRMLVKMKQL 420
Query: 501 KVLPDVKTYELLYSLFGNVNAPYEDGNRLSQVDAAKRIRMIEMDMTKHGIQHSHLSMMNL 560
KVLP+V TYE LYSLFGNVNAPYE+GNRLSQ DA KRIRMIEMDM KHGIQHS+LSM NL
Sbjct: 421 KVLPNVNTYEHLYSLFGNVNAPYEEGNRLSQADAGKRIRMIEMDMAKHGIQHSNLSMTNL 480
Query: 561 LKALGAEGMTKELLQYLNVAENLFYYNNTHLGTPIYNTVLHFFVESKEIHMAIELFNNMK 620
LKALGAEGMTKELLQYL+VAENLFYYNNT+LGTP+YNTVLHF VESKEIHMAIELFNNMK
Sbjct: 481 LKALGAEGMTKELLQYLSVAENLFYYNNTYLGTPVYNTVLHFLVESKEIHMAIELFNNMK 540
Query: 621 HSGFFPDAATFEMMIDCCSVMGCWKSAFSLLSMMIRSGFCPQILTYTGLVKIVLGFEKFD 680
HSGFFPDAATFEMM+DCCSVM C KSAF+LLSMM+R+GFCPQILTYT LVKIVL E FD
Sbjct: 541 HSGFFPDAATFEMMVDCCSVMECLKSAFALLSMMVRTGFCPQILTYTSLVKIVLRSEGFD 600
Query: 681 DALNLLDHANSEGIELDVVIMNTILQKACEKGRIDVIEFVVERMSRENIQPDPSTCHSVF 740
DALNLLD A+SEGI+LDVVIMNTIL KACEKGR+DVIEFV+ERM+RE IQPDPSTCHSVF
Sbjct: 601 DALNLLDQASSEGIQLDVVIMNTILLKACEKGRVDVIEFVIERMNREKIQPDPSTCHSVF 660
Query: 741 SAYVNLGYHNTAMEALQVLSMHMLYKDDDASPDLTDYFENFVLAEDSEVDSRILEFFQCS 800
SAYVNLGYH+TAMEALQVLSM ML K++DASPDLT+Y ENFVLAED D RILEFF+CS
Sbjct: 661 SAYVNLGYHSTAMEALQVLSMRMLSKEEDASPDLTEYVENFVLAEDPGADLRILEFFKCS 720
Query: 801 EENLSFALFNLRWSAMLGYSLCSSPNQSPWAMRLASSYDGNRIS 845
EE+LSFALFNLRWSAMLGYSLCSSPNQSPWAMRLA+SYD NR S
Sbjct: 721 EESLSFALFNLRWSAMLGYSLCSSPNQSPWAMRLANSYDANRSS 763
BLAST of Lcy12g021920 vs. ExPASy TrEMBL
Match:
A0A1S3CEF2 (pentatricopeptide repeat-containing protein At1g76280 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500041 PE=4 SV=1)
HSP 1 Score: 1349.7 bits (3492), Expect = 0.0e+00
Identity = 673/816 (82.48%), Postives = 737/816 (90.32%), Query Frame = 0
Query: 25 MHRARYRFGSIADSLYRFKPHEHGRRQDASKLVFHRALLVSKDSEFLGNGAESTKFMQMQ 84
MHRA +R GSIADS+YRFKPHE R+QDASKLVFHRALL+SK SE GNGAEST FMQ+Q
Sbjct: 1 MHRASFRLGSIADSIYRFKPHELVRKQDASKLVFHRALLISKGSEIWGNGAESTAFMQIQ 60
Query: 85 IVDALRLGDRSSASNLLMELGQEKHSSTADNFVRILSYCARSPDPLFVMETWKIMEERGI 144
IVDALRLGDRS ASNLLM LGQEK S TADNFVRILSYCA+SPDPLFVMETWKIMEERGI
Sbjct: 61 IVDALRLGDRSKASNLLMVLGQEKCSLTADNFVRILSYCAKSPDPLFVMETWKIMEERGI 120
Query: 145 FLNNTCSVLMIEALCKGGYLDEAFGLINFLAESHVMFPVLPVYNCFLRACSKRQSTVHVS 204
FLNNTCS+LMIEALCKGGYLDEAFGLINFLAESHVMFPVLPVYNCFLRAC+ RQSTVH S
Sbjct: 121 FLNNTCSLLMIEALCKGGYLDEAFGLINFLAESHVMFPVLPVYNCFLRACAIRQSTVHAS 180
Query: 205 QCLDLMDHRMVGKNEATYSELLKLAVCQKNLSSVHEIWTDFVKNYSPSVLSLRKFIWSYT 264
QCLDLMDHRMVGKNEATYSELLKLAVCQ+N SSVHEIWTDFVKNYSPSV SLRKFIWS+
Sbjct: 181 QCLDLMDHRMVGKNEATYSELLKLAVCQENSSSVHEIWTDFVKNYSPSVSSLRKFIWSFA 240
Query: 265 RLGDLKSAYIALQKMVSLAIGAAGGKLPSLELDIPIPSRTEFYHNNFYFDENGHSADELF 324
RLGDL SAY ALQKMV+LA GA G KL S LDIPIP RTEFYHNNF F+E S DE F
Sbjct: 241 RLGDLTSAYTALQKMVALATGATGRKLQS--LDIPIPLRTEFYHNNFNFEEKEPSIDEFF 300
Query: 325 CKKMVPCDGDIGQFSVNGMKCGAVESGPLTLQKNCKNSFVIKVLRWSFNDVIHTCALTRN 384
CKKMVP +GD+G SVN MKCG E+GPLT+ N ++SFV KVLRWS NDV+ +C+L N
Sbjct: 301 CKKMVPWNGDVGGISVNDMKCG--ETGPLTVPNNHRSSFVRKVLRWSSNDVMRSCSLAGN 360
Query: 385 CGLAEQLMQQMHELGLEPSCHTFDGFVRSVVSERGFSDGMKILKIMQQRKLKPYDSTLAA 444
CGLAEQLMQQMH+LGL+PS HTFDGFVRSVVSERGFS GM+ILK+MQQR L+PYDSTLAA
Sbjct: 361 CGLAEQLMQQMHKLGLQPSSHTFDGFVRSVVSERGFSAGMEILKVMQQRGLEPYDSTLAA 420
Query: 445 VSISCSKALEIDLAEALLEQISACPYPHPFNAFLSACDTMDQPERAMRMLVKMKQMKVLP 504
VS+SCSKALE+DLAEALLE++SACPYP+PFNAFLSAC MDQPERAMRMLVKMKQMKV+P
Sbjct: 421 VSVSCSKALELDLAEALLERLSACPYPYPFNAFLSACGVMDQPERAMRMLVKMKQMKVVP 480
Query: 505 DVKTYELLYSLFGNVNAPYEDGNRLSQVDAAKRIRMIEMDMTKHGIQHSHLSMMNLLKAL 564
DV+TYELLYSLFGNVNAPYE+G++LSQVDAAKRIRMIEMDM KHGIQ+SH SMMNLLKAL
Sbjct: 481 DVRTYELLYSLFGNVNAPYEEGDKLSQVDAAKRIRMIEMDMGKHGIQYSHFSMMNLLKAL 540
Query: 565 GAEGMTKELLQYLNVAENLFYYNNTHLGTPIYNTVLHFFVESKEIHMAIELFNNMKHSGF 624
GAEGM KE+LQYLN+AENLFYYNNT LG P+YNTVLHF V+SKEI+MAIELFNNMK+SGF
Sbjct: 541 GAEGMKKEVLQYLNLAENLFYYNNTSLGMPVYNTVLHFLVDSKEIYMAIELFNNMKNSGF 600
Query: 625 FPDAATFEMMIDCCSVMGCWKSAFSLLSMMIRSGFCPQILTYTGLVKIVLGFEKFDDALN 684
FPDAATFE+M+DCCSVMGC KSAF+LLS+MIRSGFCPQILTYT LVKIVLGF +FDDALN
Sbjct: 601 FPDAATFEIMLDCCSVMGCLKSAFALLSLMIRSGFCPQILTYTSLVKIVLGFGRFDDALN 660
Query: 685 LLDHANSEGIELDVVIMNTILQKACEKGRIDVIEFVVERMSRENIQPDPSTCHSVFSAYV 744
LLD A+SEGIELDV+IMNTI++KACEK RIDVIEF+VE+M+RE IQPDPSTCH+VFSAYV
Sbjct: 661 LLDQASSEGIELDVIIMNTIMRKACEKARIDVIEFLVEKMNREKIQPDPSTCHNVFSAYV 720
Query: 745 NLGYHNTAMEALQVLSMHMLYKDDDASPDLTDYFENFVLAEDSEVDSRILEFFQCSEENL 804
NLGYH+TAMEALQVLSM ML ++D +T+Y ENFVLAED+ DSRI EFF+CS E L
Sbjct: 721 NLGYHSTAMEALQVLSMRMLLCEED-DDSVTEYMENFVLAEDTGADSRIAEFFKCSREYL 780
Query: 805 SFALFNLRWSAMLGYSLCSSPNQSPWAMRLASSYDG 841
FALFNLRW AMLGYS+C SPNQSPWAMRLASSYDG
Sbjct: 781 GFALFNLRWCAMLGYSVCCSPNQSPWAMRLASSYDG 811
BLAST of Lcy12g021920 vs. NCBI nr
Match:
XP_022132690.1 (pentatricopeptide repeat-containing protein At1g76280 isoform X1 [Momordica charantia])
HSP 1 Score: 1451.0 bits (3755), Expect = 0.0e+00
Identity = 719/820 (87.68%), Postives = 765/820 (93.29%), Query Frame = 0
Query: 25 MHRARYRFGSIADSLYRFKPHEHGRRQDASKLVFHRALLVSKDSEFLGNGAESTKFMQMQ 84
MHRA R GSIADSLYRFKPHEHGR+Q +SKL FHR LL+SKDSEFLGNGAE+TKFMQMQ
Sbjct: 1 MHRATSRLGSIADSLYRFKPHEHGRQQASSKLAFHRTLLISKDSEFLGNGAETTKFMQMQ 60
Query: 85 IVDALRLGDRSSASNLLMELGQEKHSSTADNFVRILSYCARSPDPLFVMETWKIMEERGI 144
IVDALRLGDRSSASNLLMELGQEKHS TADNFVRILSYCA SPDPLFVMETW+IME+RGI
Sbjct: 61 IVDALRLGDRSSASNLLMELGQEKHSLTADNFVRILSYCAGSPDPLFVMETWRIMEDRGI 120
Query: 145 FLNNTCSVLMIEALCKGGYLDEAFGLINFLAESHVMFPVLPVYNCFLRACSKRQSTVHVS 204
FLNNTCS+LMIEALCKGGYLDEAFGLINFLAES VMFPVLPVYNCFLRAC K QSTVHV
Sbjct: 121 FLNNTCSLLMIEALCKGGYLDEAFGLINFLAESRVMFPVLPVYNCFLRACVKMQSTVHVG 180
Query: 205 QCLDLMDHRMVGKNEATYSELLKLAVCQKNLSSVHEIWTDFVKNYSPSVLSLRKFIWSYT 264
QCLDLMDHRMVGKNEATYSELLKLAV Q+NLSSVHEIWTDFVKNYSPSVLSLRKFIWSY
Sbjct: 181 QCLDLMDHRMVGKNEATYSELLKLAVFQQNLSSVHEIWTDFVKNYSPSVLSLRKFIWSYA 240
Query: 265 RLGDLKSAYIALQKMVSLAIGAAGGKLPSLELDIPIPSRTEFYHNNFYFDENGHSADELF 324
RLGDLKSA I+LQKMV+LA+GAAGGKLPSLELDIPIPS TEFY NNF F++N HS+DEL+
Sbjct: 241 RLGDLKSACISLQKMVALAVGAAGGKLPSLELDIPIPSSTEFYRNNFSFEDNEHSSDELY 300
Query: 325 CKKMVPCDGDIGQFSVNGMKCGAVESGPLTLQKNCKNSFVIKVLRWSFNDVIHTCALTRN 384
KK+V CD DIGQFSVNGMKCG ESGPLT Q NC++SFV+KVLRWSFNDVIH CA TR+
Sbjct: 301 RKKLVTCDDDIGQFSVNGMKCGD-ESGPLTFQNNCRSSFVMKVLRWSFNDVIHACAFTRD 360
Query: 385 CGLAEQLMQQMHELGLEPSCHTFDGFVRSVVSERGFSDGMKILKIMQQRKLKPYDSTLAA 444
CGLAEQLMQQM +LGL+PSCHTFDGFVRSVVSERGFSDGMKILKIMQQRKLKPYDSTLAA
Sbjct: 361 CGLAEQLMQQMLDLGLQPSCHTFDGFVRSVVSERGFSDGMKILKIMQQRKLKPYDSTLAA 420
Query: 445 VSISCSKALEIDLAEALLEQISACPYPHPFNAFLSACDTMDQPERAMRMLVKMKQMKVLP 504
VSISCSKALE+DLAEALLEQISACPYPHPFNAFL ACDTMDQPERAMRMLVKMKQ+KVLP
Sbjct: 421 VSISCSKALELDLAEALLEQISACPYPHPFNAFLKACDTMDQPERAMRMLVKMKQLKVLP 480
Query: 505 DVKTYELLYSLFGNVNAPYEDGNRLSQVDAAKRIRMIEMDMTKHGIQHSHLSMMNLLKAL 564
+V TYE LYSLFGNVNAPYE+GNRLSQ DA KRIRMIEMDM KHGIQHS+LSM NLLKAL
Sbjct: 481 NVNTYEHLYSLFGNVNAPYEEGNRLSQADAGKRIRMIEMDMAKHGIQHSNLSMTNLLKAL 540
Query: 565 GAEGMTKELLQYLNVAENLFYYNNTHLGTPIYNTVLHFFVESKEIHMAIELFNNMKHSGF 624
GAEGMTKELLQYL+VAENLFYYNNT+LGTP+YNTVLHF VESKEIHMAIELFNNMKHSGF
Sbjct: 541 GAEGMTKELLQYLSVAENLFYYNNTYLGTPVYNTVLHFLVESKEIHMAIELFNNMKHSGF 600
Query: 625 FPDAATFEMMIDCCSVMGCWKSAFSLLSMMIRSGFCPQILTYTGLVKIVLGFEKFDDALN 684
FPDAATFEMM+DCCSVM C KSAF+LLSMM+R+GFCPQILTYT LVKIVL E FDDALN
Sbjct: 601 FPDAATFEMMVDCCSVMECLKSAFALLSMMVRTGFCPQILTYTSLVKIVLRSEGFDDALN 660
Query: 685 LLDHANSEGIELDVVIMNTILQKACEKGRIDVIEFVVERMSRENIQPDPSTCHSVFSAYV 744
LLD A+SEGI+LDVVIMNTIL KACEKGR+DVIEFV+ERM+RE IQPDPSTCHSVFSAYV
Sbjct: 661 LLDQASSEGIQLDVVIMNTILLKACEKGRVDVIEFVIERMNREKIQPDPSTCHSVFSAYV 720
Query: 745 NLGYHNTAMEALQVLSMHMLYKDDDASPDLTDYFENFVLAEDSEVDSRILEFFQCSEENL 804
NLGYH+TAMEALQVLSM ML K++DASPDLT+Y ENFVLAED D RILEFF+CSEE+L
Sbjct: 721 NLGYHSTAMEALQVLSMRMLSKEEDASPDLTEYVENFVLAEDPGADLRILEFFKCSEESL 780
Query: 805 SFALFNLRWSAMLGYSLCSSPNQSPWAMRLASSYDGNRIS 845
SFALFNLRWSAMLGYSLCSSPNQSPWAMRLA+SYD NR S
Sbjct: 781 SFALFNLRWSAMLGYSLCSSPNQSPWAMRLANSYDANRSS 819
BLAST of Lcy12g021920 vs. NCBI nr
Match:
XP_023536089.1 (pentatricopeptide repeat-containing protein At1g76280 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1436.0 bits (3716), Expect = 0.0e+00
Identity = 712/815 (87.36%), Postives = 762/815 (93.50%), Query Frame = 0
Query: 25 MHRARYRFGSIADSLYRFKPHEHGRRQDASKLVFHRALLVSKDSEFLGNGAESTKFMQMQ 84
MHRAR+R GSIADSLYRF+PHEHGR+QDA+K+VF RALL+S+ E+LGN AESTKFMQ Q
Sbjct: 1 MHRARFRLGSIADSLYRFRPHEHGRKQDANKMVFRRALLISQGIEYLGNEAESTKFMQRQ 60
Query: 85 IVDALRLGDRSSASNLLMELGQEKHSSTADNFVRILSYCARSPDPLFVMETWKIMEERGI 144
IVDALR+GDRSSASNLLMELGQEKHS TADNFV ILSYCARSPDPLFVMETWKIMEERG+
Sbjct: 61 IVDALRVGDRSSASNLLMELGQEKHSLTADNFVGILSYCARSPDPLFVMETWKIMEERGV 120
Query: 145 FLNNTCSVLMIEALCKGGYLDEAFGLINFLAESHVMFPVLPVYNCFLRACSKRQSTVHVS 204
FL+NTC++LMI+ALCKGGYLDEAFGLI+FLAES VMFPVLPVYN FLRAC KRQSTVHVS
Sbjct: 121 FLDNTCTLLMIKALCKGGYLDEAFGLISFLAESRVMFPVLPVYNLFLRACGKRQSTVHVS 180
Query: 205 QCLDLMDHRMVGKNEATYSELLKLAVCQKNLSSVHEIWTDFVKNYSPSVLSLRKFIWSYT 264
QCLD+MD RMVGKNEATYSELLK+AVCQKNLSSVHEIWTDFVKNYSPSVLSLRKFIWSYT
Sbjct: 181 QCLDMMDRRMVGKNEATYSELLKVAVCQKNLSSVHEIWTDFVKNYSPSVLSLRKFIWSYT 240
Query: 265 RLGDLKSAYIALQKMVSLAIGAAGGKLPSLELDIPIPSRTEFYHNNFYFDENGHSADELF 324
RLGDLKSAY ALQKMV+L IGAAG KLPSLELDIP+P RTE YH NF F+ENG S DEL+
Sbjct: 241 RLGDLKSAYTALQKMVALVIGAAGQKLPSLELDIPVPLRTESYHENFNFEENGPSTDELY 300
Query: 325 CKKMVPCDGDIGQFSVNGMKCGAVESGPLTLQKNCKNSFVIKVLRWSFNDVIHTCALTRN 384
CKKMVPC+GDIGQFSVNGMKCG VESG LTL N +++FV+KVLRWSFNDVI CALTRN
Sbjct: 301 CKKMVPCEGDIGQFSVNGMKCGEVESGRLTLPSNYRSNFVMKVLRWSFNDVICACALTRN 360
Query: 385 CGLAEQLMQQMHELGLEPSCHTFDGFVRSVVSERGFSDGMKILKIMQQRKLKPYDSTLAA 444
CGLAEQLMQQMHELGL+PS HTFDGFVRSVVSERGFSDG+KILKIMQQRKLKPYDSTLAA
Sbjct: 361 CGLAEQLMQQMHELGLQPSSHTFDGFVRSVVSERGFSDGIKILKIMQQRKLKPYDSTLAA 420
Query: 445 VSISCSKALEIDLAEALLEQISACPYPHPFNAFLSACDTMDQPERAMRMLVKMKQMKVLP 504
VSISCSKALE+DLAEALLEQISAC +PHPFNAFLSACD MDQPERAMRMLVKMKQM+VLP
Sbjct: 421 VSISCSKALELDLAEALLEQISACVFPHPFNAFLSACDMMDQPERAMRMLVKMKQMEVLP 480
Query: 505 DVKTYELLYSLFGNVNAPYEDGNRLSQVDAAKRIRMIEMDMTKHGIQHSHLSMMNLLKAL 564
DVKTYELLYSLFGNVNAPYE+GNRLSQVDAAKRIRMIEMDM KHGIQHSH SMMNLLKAL
Sbjct: 481 DVKTYELLYSLFGNVNAPYEEGNRLSQVDAAKRIRMIEMDMEKHGIQHSHFSMMNLLKAL 540
Query: 565 GAEGMTKELLQYLNVAENLFYYNNTHLGTPIYNTVLHFFVESKEIHMAIELFNNMKHSGF 624
GAEGMTKELLQYLNVAENLFYY+NT LGTPIYNT LHF VESKEIHMAIELFNNMKHSG
Sbjct: 541 GAEGMTKELLQYLNVAENLFYYDNTCLGTPIYNTALHFLVESKEIHMAIELFNNMKHSGL 600
Query: 625 FPDAATFEMMIDCCSVMGCWKSAFSLLSMMIRSGFCPQILTYTGLVKIVLGFEKFDDALN 684
FPDAATFEMMI+CCSV+GC KSAF+LLS+MIRSGFCPQILTYT LVKIVLGFE+FDDALN
Sbjct: 601 FPDAATFEMMINCCSVIGCLKSAFALLSLMIRSGFCPQILTYTSLVKIVLGFERFDDALN 660
Query: 685 LLDHANSEGIELDVVIMNTILQKACEKGRIDVIEFVVERMSRENIQPDPSTCHSVFSAYV 744
LLD A+SEGIELDVVIMNTI+QKACEK DVIEFVVE+M RE IQPDPSTCHSVFSAYV
Sbjct: 661 LLDQASSEGIELDVVIMNTIVQKACEKVTXDVIEFVVEKMKREKIQPDPSTCHSVFSAYV 720
Query: 745 NLGYHNTAMEALQVLSMHMLYKDDDASPDLTDYFENFVLAEDSEVDSRILEFFQCSEENL 804
+LGYH+TAMEALQVLSM ML K+ D SP +T+Y E+FVLAEDSE +SRILEFF+CSEE+L
Sbjct: 721 SLGYHSTAMEALQVLSMRMLCKEHDTSPVVTEYVEDFVLAEDSEAESRILEFFKCSEESL 780
Query: 805 SFALFNLRWSAMLGYSLCSSPNQSPWAMRLASSYD 840
SFAL NLRWSAMLGYSLCSSPNQSPWAMRLASSYD
Sbjct: 781 SFALLNLRWSAMLGYSLCSSPNQSPWAMRLASSYD 815
BLAST of Lcy12g021920 vs. NCBI nr
Match:
XP_022937086.1 (pentatricopeptide repeat-containing protein At1g76280 isoform X1 [Cucurbita moschata])
HSP 1 Score: 1434.1 bits (3711), Expect = 0.0e+00
Identity = 712/815 (87.36%), Postives = 762/815 (93.50%), Query Frame = 0
Query: 25 MHRARYRFGSIADSLYRFKPHEHGRRQDASKLVFHRALLVSKDSEFLGNGAESTKFMQMQ 84
MHRAR R GSIADSLYRF+PHEHGR+QDA+K+VF RALL+S+ E+LGN AESTKFMQ Q
Sbjct: 1 MHRARLRLGSIADSLYRFRPHEHGRKQDANKMVFRRALLISQGIEYLGNEAESTKFMQRQ 60
Query: 85 IVDALRLGDRSSASNLLMELGQEKHSSTADNFVRILSYCARSPDPLFVMETWKIMEERGI 144
IVDALR+GDRSSASNLLMELGQEKHS TADNFV ILSYCARSPDPLFVMETWKIMEERG+
Sbjct: 61 IVDALRVGDRSSASNLLMELGQEKHSLTADNFVGILSYCARSPDPLFVMETWKIMEERGV 120
Query: 145 FLNNTCSVLMIEALCKGGYLDEAFGLINFLAESHVMFPVLPVYNCFLRACSKRQSTVHVS 204
FL+NTC++LMI+ALCKGGYLDEAFGLI+FLAES VMFPVLPVYN FLRAC KRQSTVHVS
Sbjct: 121 FLDNTCTLLMIKALCKGGYLDEAFGLISFLAESRVMFPVLPVYNLFLRACGKRQSTVHVS 180
Query: 205 QCLDLMDHRMVGKNEATYSELLKLAVCQKNLSSVHEIWTDFVKNYSPSVLSLRKFIWSYT 264
QCLD+MD RMVGKNEATYSELLK+AVCQKNLSSVHEIWTDFVKNYSPSVLSLRKFIW YT
Sbjct: 181 QCLDIMDRRMVGKNEATYSELLKVAVCQKNLSSVHEIWTDFVKNYSPSVLSLRKFIWCYT 240
Query: 265 RLGDLKSAYIALQKMVSLAIGAAGGKLPSLELDIPIPSRTEFYHNNFYFDENGHSADELF 324
RLGDLKSA+ ALQKMV+L IGAAG KLPSLELDIP+P RTEFYH+NF F+ENG S DE++
Sbjct: 241 RLGDLKSAHTALQKMVALVIGAAGQKLPSLELDIPVPLRTEFYHDNFNFEENGPSTDEVY 300
Query: 325 CKKMVPCDGDIGQFSVNGMKCGAVESGPLTLQKNCKNSFVIKVLRWSFNDVIHTCALTRN 384
CKKMVPC+GDI QFSVNGMKCG VESG TL N +++FV+KVLRWSFNDVI CALTRN
Sbjct: 301 CKKMVPCEGDIEQFSVNGMKCGEVESG-RTLPSNYRSNFVMKVLRWSFNDVICACALTRN 360
Query: 385 CGLAEQLMQQMHELGLEPSCHTFDGFVRSVVSERGFSDGMKILKIMQQRKLKPYDSTLAA 444
CGLAEQLMQQMHELGL+PS HTFDGFVRSVVSERGFSDG+KILKIMQQRKLKPYDSTLAA
Sbjct: 361 CGLAEQLMQQMHELGLQPSSHTFDGFVRSVVSERGFSDGIKILKIMQQRKLKPYDSTLAA 420
Query: 445 VSISCSKALEIDLAEALLEQISACPYPHPFNAFLSACDTMDQPERAMRMLVKMKQMKVLP 504
VSISCSKALE+DLAEALLEQISAC YPHPFNAFLSACD MDQPERAMRML KMKQM+VLP
Sbjct: 421 VSISCSKALELDLAEALLEQISACVYPHPFNAFLSACDMMDQPERAMRMLAKMKQMEVLP 480
Query: 505 DVKTYELLYSLFGNVNAPYEDGNRLSQVDAAKRIRMIEMDMTKHGIQHSHLSMMNLLKAL 564
DVKTYELLYSLFGNVNAPYE+GNRLSQVDAAKRIRMIEMDM KHGIQHSH SMMNLLKAL
Sbjct: 481 DVKTYELLYSLFGNVNAPYEEGNRLSQVDAAKRIRMIEMDMEKHGIQHSHFSMMNLLKAL 540
Query: 565 GAEGMTKELLQYLNVAENLFYYNNTHLGTPIYNTVLHFFVESKEIHMAIELFNNMKHSGF 624
GAEGMTKELLQYLNVAENLFYYNNT LGTPIYNT LHF VESKEIHMAIELFNNMKHSG
Sbjct: 541 GAEGMTKELLQYLNVAENLFYYNNTWLGTPIYNTALHFLVESKEIHMAIELFNNMKHSGL 600
Query: 625 FPDAATFEMMIDCCSVMGCWKSAFSLLSMMIRSGFCPQILTYTGLVKIVLGFEKFDDALN 684
FPDAATFEMMIDCCSV+GC KSAF+LLS+MIRSGFCPQILTYT LVKIVLGFE+FDDALN
Sbjct: 601 FPDAATFEMMIDCCSVIGCLKSAFALLSLMIRSGFCPQILTYTSLVKIVLGFERFDDALN 660
Query: 685 LLDHANSEGIELDVVIMNTILQKACEKGRIDVIEFVVERMSRENIQPDPSTCHSVFSAYV 744
LLD A+SEGIELDVVIMNTI+QKACEKGRIDVIEFVVE+M R+ IQPDPSTCHSVFSAYV
Sbjct: 661 LLDQASSEGIELDVVIMNTIVQKACEKGRIDVIEFVVEKMKRKKIQPDPSTCHSVFSAYV 720
Query: 745 NLGYHNTAMEALQVLSMHMLYKDDDASPDLTDYFENFVLAEDSEVDSRILEFFQCSEENL 804
+LGYH+TAMEALQVLSM ML K+ D SP +T+Y E+FVLAEDSE +SRILEFF+CSEE+L
Sbjct: 721 SLGYHSTAMEALQVLSMRMLCKEQDTSPVVTEYVEDFVLAEDSEAESRILEFFKCSEESL 780
Query: 805 SFALFNLRWSAMLGYSLCSSPNQSPWAMRLASSYD 840
SFAL NLRWSAMLGYSLCSSPNQSPWAMRLASSYD
Sbjct: 781 SFALLNLRWSAMLGYSLCSSPNQSPWAMRLASSYD 814
BLAST of Lcy12g021920 vs. NCBI nr
Match:
XP_022976056.1 (pentatricopeptide repeat-containing protein At1g76280 isoform X1 [Cucurbita maxima])
HSP 1 Score: 1429.8 bits (3700), Expect = 0.0e+00
Identity = 711/815 (87.24%), Postives = 759/815 (93.13%), Query Frame = 0
Query: 25 MHRARYRFGSIADSLYRFKPHEHGRRQDASKLVFHRALLVSKDSEFLGNGAESTKFMQMQ 84
MHRAR R GSIADSLYRF+PHEHGR+QDA+K+VF RALL+S+ E+LGN AESTKFMQ Q
Sbjct: 1 MHRARLRLGSIADSLYRFRPHEHGRKQDANKMVFRRALLISQGIEYLGNEAESTKFMQRQ 60
Query: 85 IVDALRLGDRSSASNLLMELGQEKHSSTADNFVRILSYCARSPDPLFVMETWKIMEERGI 144
IVDALR+GDRSSASNLLMELGQEKHS TADNFV ILSYCARSPDPLFVMETWKIMEERG+
Sbjct: 61 IVDALRVGDRSSASNLLMELGQEKHSLTADNFVGILSYCARSPDPLFVMETWKIMEERGV 120
Query: 145 FLNNTCSVLMIEALCKGGYLDEAFGLINFLAESHVMFPVLPVYNCFLRACSKRQSTVHVS 204
FL+NTC++LMI+ALCKGGYLDEAFGLI+FLAES VMFPVLPVYN FLRAC KRQSTVHVS
Sbjct: 121 FLDNTCTLLMIKALCKGGYLDEAFGLISFLAESRVMFPVLPVYNLFLRACGKRQSTVHVS 180
Query: 205 QCLDLMDHRMVGKNEATYSELLKLAVCQKNLSSVHEIWTDFVKNYSPSVLSLRKFIWSYT 264
QCLD+MD RMVGKNEATYSELLK+AV QKNLSSVHEIWTDFVKNYSPSVLSLRKFIWSYT
Sbjct: 181 QCLDMMDRRMVGKNEATYSELLKVAVGQKNLSSVHEIWTDFVKNYSPSVLSLRKFIWSYT 240
Query: 265 RLGDLKSAYIALQKMVSLAIGAAGGKLPSLELDIPIPSRTEFYHNNFYFDENGHSADELF 324
RLGDLKSAY ALQKMV+L IGAAG KL SLELDIP+P RTEFYH+NF F+ENG S DEL+
Sbjct: 241 RLGDLKSAYTALQKMVTLVIGAAGQKLSSLELDIPVPLRTEFYHDNFNFEENGPSTDELY 300
Query: 325 CKKMVPCDGDIGQFSVNGMKCGAVESGPLTLQKNCKNSFVIKVLRWSFNDVIHTCALTRN 384
CKK+VPC+GDI QFSVNGMKCG VESG LTL N +++FV+KVLRWSFNDVI CA TRN
Sbjct: 301 CKKVVPCEGDIWQFSVNGMKCGEVESGRLTLPSNYRSNFVMKVLRWSFNDVICACARTRN 360
Query: 385 CGLAEQLMQQMHELGLEPSCHTFDGFVRSVVSERGFSDGMKILKIMQQRKLKPYDSTLAA 444
CGLAEQLMQQMHELGL+PS HTFDGFVRSVVSERGFSDG+KILKIMQQRKLKPYDSTLAA
Sbjct: 361 CGLAEQLMQQMHELGLQPSSHTFDGFVRSVVSERGFSDGIKILKIMQQRKLKPYDSTLAA 420
Query: 445 VSISCSKALEIDLAEALLEQISACPYPHPFNAFLSACDTMDQPERAMRMLVKMKQMKVLP 504
VSISCSKALE+DLAEALLEQISAC YPHPFNAFLSACD MDQPERAMRML KMKQM+VLP
Sbjct: 421 VSISCSKALELDLAEALLEQISACVYPHPFNAFLSACDMMDQPERAMRMLAKMKQMEVLP 480
Query: 505 DVKTYELLYSLFGNVNAPYEDGNRLSQVDAAKRIRMIEMDMTKHGIQHSHLSMMNLLKAL 564
DVKTYELLYSLFGNVNAPYE+GNRLSQVDAAKRIRMIEMDM KHGIQHSH SMMNLLKAL
Sbjct: 481 DVKTYELLYSLFGNVNAPYEEGNRLSQVDAAKRIRMIEMDMEKHGIQHSHFSMMNLLKAL 540
Query: 565 GAEGMTKELLQYLNVAENLFYYNNTHLGTPIYNTVLHFFVESKEIHMAIELFNNMKHSGF 624
GAEGMTKELLQYLNVAENLFYYNNT LGTPIYNT LHF VESKEIHMA ELFNNMKHSG
Sbjct: 541 GAEGMTKELLQYLNVAENLFYYNNTCLGTPIYNTALHFLVESKEIHMATELFNNMKHSGL 600
Query: 625 FPDAATFEMMIDCCSVMGCWKSAFSLLSMMIRSGFCPQILTYTGLVKIVLGFEKFDDALN 684
FPDAATFEMMIDCCSV+GC KSAF+LLS+MIRSGFCPQILTYT LVKIVLGFE+FDDALN
Sbjct: 601 FPDAATFEMMIDCCSVIGCLKSAFALLSLMIRSGFCPQILTYTSLVKIVLGFERFDDALN 660
Query: 685 LLDHANSEGIELDVVIMNTILQKACEKGRIDVIEFVVERMSRENIQPDPSTCHSVFSAYV 744
LLD A+SEGIELDVVIMNTI+QKACEKGRIDVIEFVVE+M RE IQPDPSTCHSVFSAYV
Sbjct: 661 LLDQASSEGIELDVVIMNTIVQKACEKGRIDVIEFVVEKMKREKIQPDPSTCHSVFSAYV 720
Query: 745 NLGYHNTAMEALQVLSMHMLYKDDDASPDLTDYFENFVLAEDSEVDSRILEFFQCSEENL 804
+LGYH+TAMEALQVLSM ML K+ D SP +T+Y E+FVLAEDSE +SRILEFF+CSEE+L
Sbjct: 721 SLGYHSTAMEALQVLSMRMLCKEHDTSPVVTEYVEDFVLAEDSEAESRILEFFKCSEESL 780
Query: 805 SFALFNLRWSAMLGYSLCSSPNQSPWAMRLASSYD 840
SFAL NLRWSAMLGYSLCSS NQSPWAMRLASSYD
Sbjct: 781 SFALLNLRWSAMLGYSLCSSTNQSPWAMRLASSYD 815
BLAST of Lcy12g021920 vs. NCBI nr
Match:
KAG6591227.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1415.6 bits (3663), Expect = 0.0e+00
Identity = 710/842 (84.32%), Postives = 760/842 (90.26%), Query Frame = 0
Query: 25 MHRARYRFGSIADSLYRFKPHEHGRRQDASKLVFHRALLVSK------------------ 84
MHRAR R GSIADSLYRF+PHEHGR+QDA+K+VF RALL+S+
Sbjct: 1 MHRARLRLGSIADSLYRFRPHEHGRKQDANKMVFRRALLISQAWYVIVIFLRLSATQNFE 60
Query: 85 ---------DSEFLGNGAESTKFMQMQIVDALRLGDRSSASNLLMELGQEKHSSTADNFV 144
E+LGN AESTKFMQ QIVDALR+GDRSSASNLLMELGQEKHS TADNFV
Sbjct: 61 NSLLYAIFSGIEYLGNEAESTKFMQRQIVDALRVGDRSSASNLLMELGQEKHSLTADNFV 120
Query: 145 RILSYCARSPDPLFVMETWKIMEERGIFLNNTCSVLMIEALCKGGYLDEAFGLINFLAES 204
ILSYCARSPDPLFVMETWKIMEERG+FL+NTC++LMI+ALCKGGYLDEAFGLI+FL ES
Sbjct: 121 GILSYCARSPDPLFVMETWKIMEERGVFLDNTCTLLMIKALCKGGYLDEAFGLISFLGES 180
Query: 205 HVMFPVLPVYNCFLRACSKRQSTVHVSQCLDLMDHRMVGKNEATYSELLKLAVCQKNLSS 264
VMFPVLPVYN FLRAC KRQSTVHVSQCLD+MD RMVGKNEATYSELLK+AVCQKNLSS
Sbjct: 181 RVMFPVLPVYNLFLRACGKRQSTVHVSQCLDIMDRRMVGKNEATYSELLKVAVCQKNLSS 240
Query: 265 VHEIWTDFVKNYSPSVLSLRKFIWSYTRLGDLKSAYIALQKMVSLAIGAAGGKLPSLELD 324
VHEIWTDFVKNYSPSVLSLRKFIW YTRLGDLKSA+ ALQKMV+L IGAAG KLPSLELD
Sbjct: 241 VHEIWTDFVKNYSPSVLSLRKFIWCYTRLGDLKSAHTALQKMVALVIGAAGQKLPSLELD 300
Query: 325 IPIPSRTEFYHNNFYFDENGHSADELFCKKMVPCDGDIGQFSVNGMKCGAVESGPLTLQK 384
IP+P RTEFYH+NF F+ENG S DE++CKKMVPC+GDI QFSVNGMKCG VESG TL
Sbjct: 301 IPVPLRTEFYHDNFNFEENGPSTDEVYCKKMVPCEGDIEQFSVNGMKCGEVESG-RTLPS 360
Query: 385 NCKNSFVIKVLRWSFNDVIHTCALTRNCGLAEQLMQQMHELGLEPSCHTFDGFVRSVVSE 444
N +++FV+KVLRWSFNDVI CALTRNCGLAEQLMQQMHELGL+PS HTFDGFVRSVVSE
Sbjct: 361 NYRSNFVMKVLRWSFNDVICACALTRNCGLAEQLMQQMHELGLQPSSHTFDGFVRSVVSE 420
Query: 445 RGFSDGMKILKIMQQRKLKPYDSTLAAVSISCSKALEIDLAEALLEQISACPYPHPFNAF 504
RGFSDG+KILKIMQQRKLKPYDSTLAAVSISCSKALE+DLAEALLEQISAC +PHPFNAF
Sbjct: 421 RGFSDGIKILKIMQQRKLKPYDSTLAAVSISCSKALELDLAEALLEQISACVFPHPFNAF 480
Query: 505 LSACDTMDQPERAMRMLVKMKQMKVLPDVKTYELLYSLFGNVNAPYEDGNRLSQVDAAKR 564
LSACD MDQPERAMRML KMKQM+VLPDVKTYELLYSLFGNVNAPYE+GNRLSQVDAAKR
Sbjct: 481 LSACDMMDQPERAMRMLAKMKQMEVLPDVKTYELLYSLFGNVNAPYEEGNRLSQVDAAKR 540
Query: 565 IRMIEMDMTKHGIQHSHLSMMNLLKALGAEGMTKELLQYLNVAENLFYYNNTHLGTPIYN 624
IRMIEMDM KHGIQHSH SMMNLLKALGAEGMTKELLQYLNVAENLFYYNNT LGTPIYN
Sbjct: 541 IRMIEMDMEKHGIQHSHFSMMNLLKALGAEGMTKELLQYLNVAENLFYYNNTCLGTPIYN 600
Query: 625 TVLHFFVESKEIHMAIELFNNMKHSGFFPDAATFEMMIDCCSVMGCWKSAFSLLSMMIRS 684
T LHF VESKEIHMAIELFNNMKHSG FPDAATFEMMIDCCSV+GC KSAF+LLS+MIRS
Sbjct: 601 TALHFLVESKEIHMAIELFNNMKHSGLFPDAATFEMMIDCCSVIGCLKSAFALLSLMIRS 660
Query: 685 GFCPQILTYTGLVKIVLGFEKFDDALNLLDHANSEGIELDVVIMNTILQKACEKGRIDVI 744
GFCPQILTYT LVKIVLGFE+FDDALNLLD A+SEGIELDVVIMNTI+QKACEKGRIDVI
Sbjct: 661 GFCPQILTYTSLVKIVLGFERFDDALNLLDQASSEGIELDVVIMNTIVQKACEKGRIDVI 720
Query: 745 EFVVERMSRENIQPDPSTCHSVFSAYVNLGYHNTAMEALQVLSMHMLYKDDDASPDLTDY 804
EF VE+M RE IQPDPSTCHSVFSAYV+LGYH+TAMEALQVLSM ML K+ D SP +T+Y
Sbjct: 721 EFAVEKMKREKIQPDPSTCHSVFSAYVSLGYHSTAMEALQVLSMRMLCKEHDTSPVVTEY 780
Query: 805 FENFVLAEDSEVDSRILEFFQCSEENLSFALFNLRWSAMLGYSLCSSPNQSPWAMRLASS 840
E+FVLAEDSE +SRILEFF+CSEE+LSFAL NLRWSAMLGYSLCSSPNQSPWAMRLASS
Sbjct: 781 VEDFVLAEDSEAESRILEFFKCSEESLSFALLNLRWSAMLGYSLCSSPNQSPWAMRLASS 840
BLAST of Lcy12g021920 vs. TAIR 10
Match:
AT1G76280.3 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 754.2 bits (1946), Expect = 1.1e-217
Identity = 397/771 (51.49%), Postives = 531/771 (68.87%), Query Frame = 0
Query: 76 ESTKFMQMQIVDALRLGDRSSASNLLMELGQEKHSSTADNFVRILSYCARSPDPLFVMET 135
+ +K +Q+QIVDALR G+R AS LL +L Q +S +AD+F IL YCARSPDP+ T
Sbjct: 59 DESKILQLQIVDALRSGERQGASALLFKLIQGNYSLSADDFHDILYYCARSPDPV----T 118
Query: 136 WKIMEERGIFLNNTCSVLMIEALCKGGYLDEAFGLINFLAESHVMFPVLPVYNCFLRACS 195
+ +M ++ I L++ + ++++LC GG+LD+A I+ + E + P+LP+YN FL AC+
Sbjct: 119 YSVMCKKEISLDSRSLLFIVKSLCNGGHLDKASEFIHAVREDDRISPLLPIYNFFLGACA 178
Query: 196 KRQSTVHVSQCLDLMDHRMVGKNEATYSELLKLAVCQKNLSSVHEIWTDFVKNYSPSVLS 255
+ +S H S+CL+LMD R VGKN TY LLKLAV Q+NLS+V++IW +V +Y+ +LS
Sbjct: 179 RTRSVYHASKCLELMDQRRVGKNGITYVALLKLAVFQRNLSTVNDIWKHYVNHYNLDILS 238
Query: 256 LRKFIWSYTRLGDLKSAYIALQKMVSLA------IGAAGGKLPSLELDIPIPSRTEFYHN 315
LR+FIWS+TRLGDLKSAY LQ MV LA + + GKL S L IP+PS+ E
Sbjct: 239 LRRFIWSFTRLGDLKSAYELLQHMVYLALRGEFFVKSNRGKLHSTRLYIPVPSKDETGSE 298
Query: 316 NFYFDENGHSADELFCKKMVPCDGDIGQFSVNGMKCGAVESGPLTLQKNCKNSFVIKVLR 375
F F ++V C+ S + L K I+VLR
Sbjct: 299 KFAFG---------VTDRIVDCN----------------SSSKVALPKGHNKILAIRVLR 358
Query: 376 WSFNDVIHTCALTRNCGLAEQLMQQMHELGLEPSCHTFDGFVRSVVSERGFSDGMKILKI 435
WSFNDVIH C ++N LAEQLM QM LGL PS HT+DGF+R+V G+ GM +LK+
Sbjct: 359 WSFNDVIHACGQSKNSELAEQLMLQMQNLGLLPSSHTYDGFIRAVAFPEGYEYGMTLLKV 418
Query: 436 MQQRKLKPYDSTLAAVSISCSKALEIDLAEALLEQISACPYPHPFNAFLSACDTMDQPER 495
MQQ+ LKPYDSTLA V+ CSKAL++DLAE LL+QIS C Y +PFN L+A D++DQPER
Sbjct: 419 MQQQNLKPYDSTLATVAAYCSKALQVDLAEHLLDQISECSYSYPFNNLLAAYDSLDQPER 478
Query: 496 AMRMLVKMKQMKVLPDVKTYELLYSLFGNVNAPYEDGNRLSQVDAAKRIRMIEMDMTKHG 555
A+R+L +MK++K+ PD++TYELL+SLFGNVNAPYE+GN LSQVD KRI IEMDM ++G
Sbjct: 479 AVRVLARMKELKLRPDMRTYELLFSLFGNVNAPYEEGNMLSQVDCCKRINAIEMDMMRNG 538
Query: 556 IQHSHLSMMNLLKALGAEGMTKELLQYLNVAENLFYYNNTHLGTPIYNTVLHFFVESKEI 615
QHS +S +N+L+ALGAEGM E++++L AENL ++N +LGTP YN VLH +E+ E
Sbjct: 539 FQHSPISRLNVLRALGAEGMVNEMIRHLQKAENLSAHSNMYLGTPTYNIVLHSLLEANET 598
Query: 616 HMAIELFNNMKHSGFFPDAATFEMMIDCCSVMGCWKSAFSLLSMMIRSGFCPQILTYTGL 675
M I +F MK G D AT+ +MIDCCS++ +KSA +L+SMMIR GF P+ +T+T L
Sbjct: 599 DMVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACALVSMMIRDGFSPKAVTFTAL 658
Query: 676 VKIVLGFEKFDDALNLLDHANSEGIELDVVIMNTILQKACEKGRIDVIEFVVERMSRENI 735
+KI+L F++ALNLLD A E I LDV+ NTIL+KA EKG IDVIE++VE+M RE +
Sbjct: 659 MKILLNDANFEEALNLLDQAALEEIHLDVLSYNTILRKAFEKGMIDVIEYIVEQMHREKV 718
Query: 736 QPDPSTCHSVFSAYVNLGYHNTAMEALQVLSMHMLYKDDDAS--PDLTDYFENFVLAEDS 795
PDP+TCH VFS YV GYH TA+EAL VLS+ ML ++D S + ENFV++ED
Sbjct: 719 NPDPTTCHYVFSCYVEKGYHATAIEALNVLSLRMLNEEDKESLQDKKIELEENFVMSEDP 778
Query: 796 EVDSRILEFFQCSEENLSFALFNLRWSAMLGYSLCSSPNQSPWAMRLASSY 839
E +++I+E F+ SEE+L+ AL NLRW AMLG + S +QSPWA L++ Y
Sbjct: 779 EAETKIIELFRKSEEHLAAALLNLRWCAMLGGRIIWSEDQSPWARALSNKY 800
BLAST of Lcy12g021920 vs. TAIR 10
Match:
AT1G76280.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 716.1 bits (1847), Expect = 3.4e-206
Identity = 385/771 (49.94%), Postives = 514/771 (66.67%), Query Frame = 0
Query: 76 ESTKFMQMQIVDALRLGDRSSASNLLMELGQEKHSSTADNFVRILSYCARSPDPLFVMET 135
+ +K +Q+QIVDALR G+R AS LL +L Q +S +AD+F IL YCARSPDP+FVMET
Sbjct: 59 DESKILQLQIVDALRSGERQGASALLFKLIQGNYSLSADDFHDILYYCARSPDPVFVMET 118
Query: 136 WKIMEERGIFLNNTCSVLMIEALCKGGYLDEAFGLINFLAESHVMFPVLPVYNCFLRACS 195
+ +M ++ I L++ + ++++LC GG+LD+A I+ + E + P+LP+YN FL AC+
Sbjct: 119 YSVMCKKEISLDSRSLLFIVKSLCNGGHLDKASEFIHAVREDDRISPLLPIYNFFLGACA 178
Query: 196 KRQSTVHVSQCLDLMDHRMVGKNEATYSELLKLAVCQKNLSSVHEIWTDFVKNYSPSVLS 255
+ +S H S+CL+LMD R VGKN TY LLKLAV Q+NLS+V++IW +V +Y+ +LS
Sbjct: 179 RTRSVYHASKCLELMDQRRVGKNGITYVALLKLAVFQRNLSTVNDIWKHYVNHYNLDILS 238
Query: 256 LRKFIWSYTRLGDLKSAYIALQKMVSLA------IGAAGGKLPSLELDIPIPSRTEFYHN 315
LR+FIWS+TRLGDLKSAY LQ MV LA + + GKL S L IP+PS+ E
Sbjct: 239 LRRFIWSFTRLGDLKSAYELLQHMVYLALRGEFFVKSNRGKLHSTRLYIPVPSKDETGSE 298
Query: 316 NFYFDENGHSADELFCKKMVPCDGDIGQFSVNGMKCGAVESGPLTLQKNCKNSFVIKVLR 375
F F ++V C+ S + L K I+VLR
Sbjct: 299 KFAFG---------VTDRIVDCN----------------SSSKVALPKGHNKILAIRVLR 358
Query: 376 WSFNDVIHTCALTRNCGLAEQLMQQMHELGLEPSCHTFDGFVRSVVSERGFSDGMKILKI 435
WSFNDVIH C ++N LAEQLM Q LK+
Sbjct: 359 WSFNDVIHACGQSKNSELAEQLMLQ--------------------------------LKV 418
Query: 436 MQQRKLKPYDSTLAAVSISCSKALEIDLAEALLEQISACPYPHPFNAFLSACDTMDQPER 495
MQQ+ LKPYDSTLA V+ CSKAL++DLAE LL+QIS C Y +PFN L+A D++DQPER
Sbjct: 419 MQQQNLKPYDSTLATVAAYCSKALQVDLAEHLLDQISECSYSYPFNNLLAAYDSLDQPER 478
Query: 496 AMRMLVKMKQMKVLPDVKTYELLYSLFGNVNAPYEDGNRLSQVDAAKRIRMIEMDMTKHG 555
A+R+L +MK++K+ PD++TYELL+SLFGNVNAPYE+GN LSQVD KRI IEMDM ++G
Sbjct: 479 AVRVLARMKELKLRPDMRTYELLFSLFGNVNAPYEEGNMLSQVDCCKRINAIEMDMMRNG 538
Query: 556 IQHSHLSMMNLLKALGAEGMTKELLQYLNVAENLFYYNNTHLGTPIYNTVLHFFVESKEI 615
QHS +S +N+L+ALGAEGM E++++L AENL ++N +LGTP YN VLH +E+ E
Sbjct: 539 FQHSPISRLNVLRALGAEGMVNEMIRHLQKAENLSAHSNMYLGTPTYNIVLHSLLEANET 598
Query: 616 HMAIELFNNMKHSGFFPDAATFEMMIDCCSVMGCWKSAFSLLSMMIRSGFCPQILTYTGL 675
M I +F MK G D AT+ +MIDCCS++ +KSA +L+SMMIR GF P+ +T+T L
Sbjct: 599 DMVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACALVSMMIRDGFSPKAVTFTAL 658
Query: 676 VKIVLGFEKFDDALNLLDHANSEGIELDVVIMNTILQKACEKGRIDVIEFVVERMSRENI 735
+KI+L F++ALNLLD A E I LDV+ NTIL+KA EKG IDVIE++VE+M RE +
Sbjct: 659 MKILLNDANFEEALNLLDQAALEEIHLDVLSYNTILRKAFEKGMIDVIEYIVEQMHREKV 718
Query: 736 QPDPSTCHSVFSAYVNLGYHNTAMEALQVLSMHMLYKDDDAS--PDLTDYFENFVLAEDS 795
PDP+TCH VFS YV GYH TA+EAL VLS+ ML ++D S + ENFV++ED
Sbjct: 719 NPDPTTCHYVFSCYVEKGYHATAIEALNVLSLRMLNEEDKESLQDKKIELEENFVMSEDP 772
Query: 796 EVDSRILEFFQCSEENLSFALFNLRWSAMLGYSLCSSPNQSPWAMRLASSY 839
E +++I+E F+ SEE+L+ AL NLRW AMLG + S +QSPWA L++ Y
Sbjct: 779 EAETKIIELFRKSEEHLAAALLNLRWCAMLGGRIIWSEDQSPWARALSNKY 772
BLAST of Lcy12g021920 vs. TAIR 10
Match:
AT1G76280.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 639.0 bits (1647), Expect = 5.2e-183
Identity = 334/649 (51.46%), Postives = 448/649 (69.03%), Query Frame = 0
Query: 76 ESTKFMQMQIVDALRLGDRSSASNLLMELGQEKHSSTADNFVRILSYCARSPDPLFVMET 135
+ +K +Q+QIVDALR G+R AS LL +L Q +S +AD+F IL YCARSPDP+FVMET
Sbjct: 59 DESKILQLQIVDALRSGERQGASALLFKLIQGNYSLSADDFHDILYYCARSPDPVFVMET 118
Query: 136 WKIMEERGIFLNNTCSVLMIEALCKGGYLDEAFGLINFLAESHVMFPVLPVYNCFLRACS 195
+ +M ++ I L++ + ++++LC GG+LD+A I+ + E + P+LP+YN FL AC+
Sbjct: 119 YSVMCKKEISLDSRSLLFIVKSLCNGGHLDKASEFIHAVREDDRISPLLPIYNFFLGACA 178
Query: 196 KRQSTVHVSQCLDLMDHRMVGKNEATYSELLKLAVCQKNLSSVHEIWTDFVKNYSPSVLS 255
+ +S H S+CL+LMD R VGKN TY LLKLAV Q+NLS+V++IW +V +Y+ +LS
Sbjct: 179 RTRSVYHASKCLELMDQRRVGKNGITYVALLKLAVFQRNLSTVNDIWKHYVNHYNLDILS 238
Query: 256 LRKFIWSYTRLGDLKSAYIALQKMVSLA------IGAAGGKLPSLELDIPIPSRTEFYHN 315
LR+FIWS+TRLGDLKSAY LQ MV LA + + GKL S L IP+PS+ E
Sbjct: 239 LRRFIWSFTRLGDLKSAYELLQHMVYLALRGEFFVKSNRGKLHSTRLYIPVPSKDETGSE 298
Query: 316 NFYFDENGHSADELFCKKMVPCDGDIGQFSVNGMKCGAVESGPLTLQKNCKNSFVIKVLR 375
F F ++V C+ S + L K I+VLR
Sbjct: 299 KFAFG---------VTDRIVDCN----------------SSSKVALPKGHNKILAIRVLR 358
Query: 376 WSFNDVIHTCALTRNCGLAEQLMQQMHELGLEPSCHTFDGFVRSVVSERGFSDGMKILKI 435
WSFNDVIH C ++N LAEQLM QM LGL PS HT+DGF+R+V G+ GM +LK+
Sbjct: 359 WSFNDVIHACGQSKNSELAEQLMLQMQNLGLLPSSHTYDGFIRAVAFPEGYEYGMTLLKV 418
Query: 436 MQQRKLKPYDSTLAAVSISCSKALEIDLAEALLEQISACPYPHPFNAFLSACDTMDQPER 495
MQQ+ LKPYDSTLA V+ CSKAL++DLAE LL+QIS C Y +PFN L+A D++DQPER
Sbjct: 419 MQQQNLKPYDSTLATVAAYCSKALQVDLAEHLLDQISECSYSYPFNNLLAAYDSLDQPER 478
Query: 496 AMRMLVKMKQMKVLPDVKTYELLYSLFGNVNAPYEDGNRLSQVDAAKRIRMIEMDMTKHG 555
A+R+L +MK++K+ PD++TYELL+SLFGNVNAPYE+GN LSQVD KRI IEMDM ++G
Sbjct: 479 AVRVLARMKELKLRPDMRTYELLFSLFGNVNAPYEEGNMLSQVDCCKRINAIEMDMMRNG 538
Query: 556 IQHSHLSMMNLLKALGAEGMTKELLQYLNVAENLFYYNNTHLGTPIYNTVLHFFVESKEI 615
QHS +S +N+L+ALGAEGM E++++L AENL ++N +LGTP YN VLH +E+ E
Sbjct: 539 FQHSPISRLNVLRALGAEGMVNEMIRHLQKAENLSAHSNMYLGTPTYNIVLHSLLEANET 598
Query: 616 HMAIELFNNMKHSGFFPDAATFEMMIDCCSVMGCWKSAFSLLSMMIRSGFCPQILTYTGL 675
M I +F MK G D AT+ +MIDCCS++ +KSA +L+SMMIR GF P+ +T+T L
Sbjct: 599 DMVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACALVSMMIRDGFSPKAVTFTAL 658
Query: 676 VKIVLGFEKFDDALNLLDHANSEGIELDVVIMNTILQKACEKGRIDVIE 719
+KI+L F++ALNLLD A E I LDV+ NTIL+KA EK +I V++
Sbjct: 659 MKILLNDANFEEALNLLDQAALEEIHLDVLSYNTILRKAFEKVKIFVVK 682
BLAST of Lcy12g021920 vs. TAIR 10
Match:
AT5G65560.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 89.7 bits (221), Expect = 1.2e-17
Identity = 71/373 (19.03%), Postives = 159/373 (42.63%), Query Frame = 0
Query: 370 WSFNDVIHTCALTRNCGLAEQLMQQMHELGLEPSCHTFDGFVRSVVSERGFSDGMKILKI 429
+++N +++ N A Q + ++ E GL+P T+ + + K+
Sbjct: 219 YTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNE 278
Query: 430 MQQRKLKPYDSTLAAVSISCSKALEIDLAEAL---LEQISACPYPHPFNAFLSACDTMDQ 489
M + + + + A ID A L ++ P + + + ++
Sbjct: 279 MPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSER 338
Query: 490 PERAMRMLVKMKQMKVLPDVKTYELLYSLFGNVNAPYEDGNRLSQVDAAKRIRMIEMDMT 549
A+ ++ +M++ + P++ TY +L + L ++ R + M
Sbjct: 339 KSEALNLVKEMEETGIKPNIHTYTVLI-------------DSLCSQCKFEKARELLGQML 398
Query: 550 KHGIQHSHLSMMNLLKALGAEGMTKELLQYLNVAENLFYYNNTHLGTPIYNTVLHFFVES 609
+ G+ + ++ L+ GM ++ + + + E+ NT YN ++ + +S
Sbjct: 399 EKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTR----TYNELIKGYCKS 458
Query: 610 KEIHMAIELFNNMKHSGFFPDAATFEMMIDCCSVMGCWKSAFSLLSMMIRSGFCPQILTY 669
+H A+ + N M PD T+ +ID G + SA+ LLS+M G P TY
Sbjct: 459 -NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTY 518
Query: 670 TGLVKIVLGFEKFDDALNLLDHANSEGIELDVVIMNTILQKACEKGRIDVIEFVVERMSR 729
T ++ + ++ ++A +L D +G+ +VV+ ++ C+ G++D ++E+M
Sbjct: 519 TSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLS 573
Query: 730 ENIQPDPSTCHSV 740
+N P+ T +++
Sbjct: 579 KNCLPNSLTFNAL 573
BLAST of Lcy12g021920 vs. TAIR 10
Match:
AT5G02860.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 84.0 bits (206), Expect = 6.5e-16
Identity = 86/354 (24.29%), Postives = 138/354 (38.98%), Query Frame = 0
Query: 462 LEQISACPYPHPFNAFLSACDTMDQPERAMRMLV-KMKQMKVLPDVKTYELLYSLFGNVN 521
+E+ P +N L+ M P + LV KMK + PD TY L + +
Sbjct: 234 MEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGS 293
Query: 522 APYEDGNRLSQVDAAKRIRMIEMDMTKHGIQHSHLSMMNLLKALGAEGMTKELLQYLNVA 581
E ++ AA G + ++ LL G KE ++ LN
Sbjct: 294 LHQEAAQVFEEMKAA-------------GFSYDKVTYNALLDVYGKSHRPKEAMKVLNE- 353
Query: 582 ENLFYYNNTHLGTPIYNTVLHFFVESKEIHMAIELFNNMKHSGFFPDAATFEMMIDCCSV 641
N YN+++ + + A+EL N M G PD T+ ++
Sbjct: 354 ---MVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFER 413
Query: 642 MGCWKSAFSLLSMMIRSGFCPQILTYTGLVKIVLGFEKFDDALNLLDHANSEGIELDVVI 701
G +SA S+ M +G P I T+ +K+ KF + + + D N G+ D+V
Sbjct: 414 AGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVT 473
Query: 702 MNTILQKACEKGRIDVIEFVVERMSRENIQPDPSTCHSVFSAYVNLGYHNTAMEALQVLS 761
NT+L + G + V + M R P+ T +++ SAY G AM +
Sbjct: 474 WNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAM------T 533
Query: 762 MHMLYKDDDASPDLTDYFENFVLA--------EDSEVDSRILEFFQCSEENLSF 807
++ D +PDL+ Y N VLA E SE +E +C L++
Sbjct: 534 VYRRMLDAGVTPDLSTY--NTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTY 562
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9SGQ6 | 4.7e-205 | 49.94 | Pentatricopeptide repeat-containing protein At1g76280 OS=Arabidopsis thaliana OX... | [more] |
Q9LSL9 | 1.7e-16 | 19.03 | Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX... | [more] |
Q76C99 | 4.9e-16 | 23.58 | Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV... | [more] |
Q9LYZ9 | 9.1e-15 | 24.29 | Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX... | [more] |
Q9M302 | 2.0e-14 | 20.83 | Pentatricopeptide repeat-containing protein At3g48810 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1BT64 | 0.0e+00 | 87.68 | pentatricopeptide repeat-containing protein At1g76280 isoform X1 OS=Momordica ch... | [more] |
A0A6J1F9C6 | 0.0e+00 | 87.36 | pentatricopeptide repeat-containing protein At1g76280 isoform X1 OS=Cucurbita mo... | [more] |
A0A6J1IFV2 | 0.0e+00 | 87.24 | pentatricopeptide repeat-containing protein At1g76280 isoform X1 OS=Cucurbita ma... | [more] |
A0A6J1BUK2 | 0.0e+00 | 88.09 | pentatricopeptide repeat-containing protein At1g76280 isoform X2 OS=Momordica ch... | [more] |
A0A1S3CEF2 | 0.0e+00 | 82.48 | pentatricopeptide repeat-containing protein At1g76280 isoform X1 OS=Cucumis melo... | [more] |
Match Name | E-value | Identity | Description | |
XP_022132690.1 | 0.0e+00 | 87.68 | pentatricopeptide repeat-containing protein At1g76280 isoform X1 [Momordica char... | [more] |
XP_023536089.1 | 0.0e+00 | 87.36 | pentatricopeptide repeat-containing protein At1g76280 [Cucurbita pepo subsp. pep... | [more] |
XP_022937086.1 | 0.0e+00 | 87.36 | pentatricopeptide repeat-containing protein At1g76280 isoform X1 [Cucurbita mosc... | [more] |
XP_022976056.1 | 0.0e+00 | 87.24 | pentatricopeptide repeat-containing protein At1g76280 isoform X1 [Cucurbita maxi... | [more] |
KAG6591227.1 | 0.0e+00 | 84.32 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
Match Name | E-value | Identity | Description | |
AT1G76280.3 | 1.1e-217 | 51.49 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G76280.1 | 3.4e-206 | 49.94 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G76280.2 | 5.2e-183 | 51.46 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G65560.1 | 1.2e-17 | 19.03 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G02860.1 | 6.5e-16 | 24.29 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |