Lcy12g021710 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy12g021710
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Plastocyanin
Location	Chr12: 48664323 .. 48665742 (-)
RNA-Seq Expression	Lcy12g021710
Synteny	Lcy12g021710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGGCATATAACTTATAATCAATTGATTATTAAAAGAGAATTTCGAAATTTTTTCAGCCACAAGGAATAAAAGAACCAAAGTAGCAGAGAAACCGTCACGTTATCCGTTGCCACGTCATAGGGTGGAATCCAAATCAGCCAATGAGAATCGCCCAAAACCAGATAATCCATTTGCAATATCCAGCGTTGGAACTAGCCACTCCACTCATCGCCGGACCACTCATCCCTCATCCACTCCCAAATCAATCTCTCTCCTCTTTCATTATAAACCACTTTCCCTTTCTCCCCTTCTTTGATTCAACCAAATTTCCCAAAAATCTCCACTCATGGCCGCCGTCACCTCCGCCGCCGTCGCCATCCCCTCCTTCACCGGCCTCAAATCCTCGGCCGCCGCCAAACCCACCGCCGCCGTCCGCGTCCCCTCCCCCGCCGCCCCGAAGCTCACCGTCAGAGCCTCCCTGAAGGACCTGGGCGTGGCCGTGGCCGCCACCGCCGCCAGCGCCCTGCTCGCGAGCAACGCCTTGGCCATCGAAATCAAGCTCGGAAGCGACGATGGAGGGCTGGTGTTCGAGCCGAAAGAATTCTCGGTGGCCTCCGGCGAGAAAATCGTGTTCAAGAACAACGCGGGATTCCCACACAACGTGTTGTTCGACGAGGACGAGGTGCCGAGCGGAGTGGACGTGAGCAAGATCTCGATGAGCGAAGAAGATCTTCTGAATGCCCCCGGCGAGGAGTACTCCGTCAGCCTCACGGAAAAGGGAACTTACTCTTTCTACTGTTCGCCTCACCAAGGAGCTGGAATGGTCGGAAAAGTCACCGTCAACTGATAATTGAATCCCGTTTCATTTTTCTCTGTAATGTTCTTCCAATTAAGTTTAAATGTGTTCGGTTTTTCCGTTCTACTGACTACTGAGAGGCTGTACGCTGTAGAGCTTTCAGATTCATCCTAGTATATGAGATTCATAAACCGCCAATAATGTAATGTAATCGACGCGCGCTGTTCTTCGTGGGCTTTGCTTTAGGCCCATTTCAAAGTACTAGATAAATGGGCTTTTCTTCCTCGAAACTGGCCCAATCGAAAGTACTACATTTTGGTTCATGAGAAAAATCCATAGATTATTAAAAGGATCGTTGGGATGAGTAGCAATTTAAGGATTGTTATTTGTAAATATAGAAAATTTTTTCAAAAAAATTATAAATGGGGCAAATTTATCAATATTGATAGGCTTCAATCACAATGCATGTAGTCTATTAGTCATAGACTACTGTCACTGATAGAATAATCCATTGACAATAACTGTAATTGTGATTAAAGTTTATCATTAATAGACTTCTATCACTTGTAGATTTCAATCATAATGCATTTAGTCTATCATTAATAGACTACTATTACTGATCGAACAGTATGTTAGCAATAATT

mRNA sequence

CTGGCATATAACTTATAATCAATTGATTATTAAAAGAGAATTTCGAAATTTTTTCAGCCACAAGGAATAAAAGAACCAAAGTAGCAGAGAAACCGTCACGTTATCCGTTGCCACGTCATAGGGTGGAATCCAAATCAGCCAATGAGAATCGCCCAAAACCAGATAATCCATTTGCAATATCCAGCGTTGGAACTAGCCACTCCACTCATCGCCGGACCACTCATCCCTCATCCACTCCCAAATCAATCTCTCTCCTCTTTCATTATAAACCACTTTCCCTTTCTCCCCTTCTTTGATTCAACCAAATTTCCCAAAAATCTCCACTCATGGCCGCCGTCACCTCCGCCGCCGTCGCCATCCCCTCCTTCACCGGCCTCAAATCCTCGGCCGCCGCCAAACCCACCGCCGCCGTCCGCGTCCCCTCCCCCGCCGCCCCGAAGCTCACCGTCAGAGCCTCCCTGAAGGACCTGGGCGTGGCCGTGGCCGCCACCGCCGCCAGCGCCCTGCTCGCGAGCAACGCCTTGGCCATCGAAATCAAGCTCGGAAGCGACGATGGAGGGCTGGTGTTCGAGCCGAAAGAATTCTCGGTGGCCTCCGGCGAGAAAATCGTGTTCAAGAACAACGCGGGATTCCCACACAACGTGTTGTTCGACGAGGACGAGGTGCCGAGCGGAGTGGACGTGAGCAAGATCTCGATGAGCGAAGAAGATCTTCTGAATGCCCCCGGCGAGGAGTACTCCGTCAGCCTCACGGAAAAGGGAACTTACTCTTTCTACTGTTCGCCTCACCAAGGAGCTGGAATGGTCGGAAAAGTCACCGTCAACTGATAATTGAATCCCGTTTCATTTTTCTCTGTAATGTTCTTCCAATTAAGTTTAAATGTGTTCGGTTTTTCCGTTCTACTGACTACTGAGAGGCTGTACGCTGTAGAGCTTTCAGATTCATCCTAGTATATGAGATTCATAAACCGCCAATAATGTAATGTAATCGACGCGCGCTGTTCTTCGTGGGCTTTGCTTTAGGCCCATTTCAAAGTACTAGATAAATGGGCTTTTCTTCCTCGAAACTGGCCCAATCGAAAGTACTACATTTTGGTTCATGAGAAAAATCCATAGATTATTAAAAGGATCGTTGGGATGAGTAGCAATTTAAGGATTGTTATTTGTAAATATAGAAAATTTTTTCAAAAAAATTATAAATGGGGCAAATTTATCAATATTGATAGGCTTCAATCACAATGCATGTAGTCTATTAGTCATAGACTACTGTCACTGATAGAATAATCCATTGACAATAACTGTAATTGTGATTAAAGTTTATCATTAATAGACTTCTATCACTTGTAGATTTCAATCATAATGCATTTAGTCTATCATTAATAGACTACTATTACTGATCGAACAGTATGTTAGCAATAATT

Coding sequence (CDS)

ATGGCCGCCGTCACCTCCGCCGCCGTCGCCATCCCCTCCTTCACCGGCCTCAAATCCTCGGCCGCCGCCAAACCCACCGCCGCCGTCCGCGTCCCCTCCCCCGCCGCCCCGAAGCTCACCGTCAGAGCCTCCCTGAAGGACCTGGGCGTGGCCGTGGCCGCCACCGCCGCCAGCGCCCTGCTCGCGAGCAACGCCTTGGCCATCGAAATCAAGCTCGGAAGCGACGATGGAGGGCTGGTGTTCGAGCCGAAAGAATTCTCGGTGGCCTCCGGCGAGAAAATCGTGTTCAAGAACAACGCGGGATTCCCACACAACGTGTTGTTCGACGAGGACGAGGTGCCGAGCGGAGTGGACGTGAGCAAGATCTCGATGAGCGAAGAAGATCTTCTGAATGCCCCCGGCGAGGAGTACTCCGTCAGCCTCACGGAAAAGGGAACTTACTCTTTCTACTGTTCGCCTCACCAAGGAGCTGGAATGGTCGGAAAAGTCACCGTCAACTGA

Protein sequence

MAAVTSAAVAIPSFTGLKSSAAAKPTAAVRVPSPAAPKLTVRASLKDLGVAVAATAASALLASNALAIEIKLGSDDGGLVFEPKEFSVASGEKIVFKNNAGFPHNVLFDEDEVPSGVDVSKISMSEEDLLNAPGEEYSVSLTEKGTYSFYCSPHQGAGMVGKVTVN

Homology

[Close]

BLAST of Lcy12g021710 vs. ExPASy Swiss-Prot
Match: P00289 (Plastocyanin, chloroplastic OS=Spinacia oleracea OX=3562 GN=PETE PE=1 SV=2)

HSP 1 Score: 228.4 bits (581), Expect = 5.9e-59
Identity = 122/168 (72.62%), Postives = 143/168 (85.12%), Query Frame = 0


Query: 1   MAAV-TSAAVAIPSFTGLKSSAAAKPTAAVRVP-SPAAPKLTVRASLKDLGVAVAATAAS 60
           MA V +SAAVA+PSFTGLK+S + KPT A  +P + A P+L+V+ASLK++G AV ATAA+
Sbjct: 1   MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA 60

Query: 61  ALLASNALAIEIKLGSDDGGLVFEPKEFSVASGEKIVFKNNAGFPHNVLFDEDEVPSGVD 120
            LLA NA+A+E+ LG  DG L F P +FSVASGE+IVFKNNAGFPHNV+FDEDE+PSGVD
Sbjct: 61  GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVD 120

Query: 121 VSKISMSEEDLLNAPGEEYSVSLTEKGTYSFYCSPHQGAGMVGKVTVN 167
            +KISMSEEDLLNAPGE Y V+LTEKGTY FYCSPHQGAGMVGKVTVN
Sbjct: 121 AAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 168

[Close]

BLAST of Lcy12g021710 vs. ExPASy Swiss-Prot
Match: P11970 (Plastocyanin B, chloroplastic OS=Populus nigra OX=3691 GN=PETE PE=1 SV=2)

HSP 1 Score: 226.1 bits (575), Expect = 2.9e-58
Identity = 119/168 (70.83%), Postives = 146/168 (86.90%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLKSSAA--AKPTAAVRVPSPAAPKLTVRASLKDLGVAVAATAAS 60
           MAAVTSAAV+IPSFTGLK+++A  AK +A+ +V +   P+L+++ASLK++G AV ATAAS
Sbjct: 1   MAAVTSAAVSIPSFTGLKAASASNAKVSASAKVSASPLPRLSIKASLKEVGAAVVATAAS 60

Query: 61  ALLASNALAIEIKLGSDDGGLVFEPKEFSVASGEKIVFKNNAGFPHNVLFDEDEVPSGVD 120
           A++ASNA+A+++ LG+DDG L F P EFSV +GEKIVFKNNAGFPHNVLFDED VPSGVD
Sbjct: 61  AMIASNAMAVDVLLGADDGSLAFVPSEFSVPAGEKIVFKNNAGFPHNVLFDEDAVPSGVD 120

Query: 121 VSKISMSEEDLLNAPGEEYSVSLTEKGTYSFYCSPHQGAGMVGKVTVN 167
           VSKISMSEEDLLNA GE + V+L++KG Y+FYCSPHQGAGMVGKV VN
Sbjct: 121 VSKISMSEEDLLNAKGETFEVALSDKGEYTFYCSPHQGAGMVGKVIVN 168

[Close]

BLAST of Lcy12g021710 vs. ExPASy Swiss-Prot
Match: P00299 (Plastocyanin A, chloroplastic OS=Populus nigra OX=3691 GN=PETE PE=1 SV=2)

HSP 1 Score: 224.6 bits (571), Expect = 8.5e-58
Identity = 116/168 (69.05%), Postives = 143/168 (85.12%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLKSSAA--AKPTAAVRVPSPAAPKLTVRASLKDLGVAVAATAAS 60
           MA VTSAAV+IPSFTGLK+ +A  AK +A+ +V +   P+L+++AS+KD+G AV ATAAS
Sbjct: 1   MATVTSAAVSIPSFTGLKAGSASNAKVSASAKVSASPLPRLSIKASMKDVGAAVVATAAS 60

Query: 61  ALLASNALAIEIKLGSDDGGLVFEPKEFSVASGEKIVFKNNAGFPHNVLFDEDEVPSGVD 120
           A++ASNA+AI++ LG+DDG L F P EFS++ GEKIVFKNNAGFPHN++FDED +PSGVD
Sbjct: 61  AMIASNAMAIDVLLGADDGSLAFVPSEFSISPGEKIVFKNNAGFPHNIVFDEDSIPSGVD 120

Query: 121 VSKISMSEEDLLNAPGEEYSVSLTEKGTYSFYCSPHQGAGMVGKVTVN 167
            SKISMSEEDLLNA GE + V+L+ KG YSFYCSPHQGAGMVGKVTVN
Sbjct: 121 ASKISMSEEDLLNAKGETFEVALSNKGEYSFYCSPHQGAGMVGKVTVN 168

[Close]

BLAST of Lcy12g021710 vs. ExPASy Swiss-Prot
Match: P16002 (Plastocyanin, chloroplastic OS=Pisum sativum OX=3888 GN=PETE PE=3 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 1.5e-57
Identity = 118/168 (70.24%), Postives = 138/168 (82.14%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLKSSAAAKPTAAVRVPSPA--APKLTVRASLKDLGVAVAATAAS 60
           MA VTS  VAIPSF+GLK++AA K +A  ++P+    +P+L VRASLKD GVA+ ATAAS
Sbjct: 1   MATVTSTTVAIPSFSGLKTNAATKVSAMAKIPTSTSQSPRLCVRASLKDFGVALVATAAS 60

Query: 61  ALLASNALAIEIKLGSDDGGLVFEPKEFSVASGEKIVFKNNAGFPHNVLFDEDEVPSGVD 120
           A+LASNALA+E+ LG+ DGGL F P    V++GE IVFKNNAGFPHNV+FDEDE+P+GVD
Sbjct: 61  AVLASNALAVEVLLGASDGGLAFVPSSLEVSAGETIVFKNNAGFPHNVVFDEDEIPAGVD 120

Query: 121 VSKISMSEEDLLNAPGEEYSVSLTEKGTYSFYCSPHQGAGMVGKVTVN 167
            SKISM EEDLLNAPGE YSV L  KGTY FYCSPHQGAGMVG+VTVN
Sbjct: 121 ASKISMPEEDLLNAPGETYSVKLDAKGTYKFYCSPHQGAGMVGQVTVN 168

[Close]

BLAST of Lcy12g021710 vs. ExPASy Swiss-Prot
Match: P17340 (Plastocyanin, chloroplastic OS=Solanum lycopersicum OX=4081 GN=PETE PE=2 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 1.9e-57
Identity = 120/170 (70.59%), Postives = 140/170 (82.35%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLK----SSAAAKPTAAVRVPSPAAPKLTVRASLKDLGVAVAATA 60
           MA VTSAAVAIPSFTGLK    SS+     A+ +V +    +LTV+ASLKD+G  VAATA
Sbjct: 1   MATVTSAAVAIPSFTGLKAGASSSSRVSTGASAKVAAAPVARLTVKASLKDVGAVVAATA 60

Query: 61  ASALLASNALAIEIKLGSDDGGLVFEPKEFSVASGEKIVFKNNAGFPHNVLFDEDEVPSG 120
            SA+LASNA+A+E+ LG DDG L F P  FSV++GEKI FKNNAGFPHNV+FDEDE+P+G
Sbjct: 61  VSAMLASNAMALEVLLGGDDGSLAFIPGNFSVSAGEKITFKNNAGFPHNVVFDEDEIPAG 120

Query: 121 VDVSKISMSEEDLLNAPGEEYSVSLTEKGTYSFYCSPHQGAGMVGKVTVN 167
           VD SKISMSEEDLLNA GE YSV+L+EKGTY+FYC+PHQGAGMVGKVTVN
Sbjct: 121 VDASKISMSEEDLLNAAGETYSVTLSEKGTYTFYCAPHQGAGMVGKVTVN 170

[Close]

BLAST of Lcy12g021710 vs. ExPASy TrEMBL
Match: A0A5A7VCJ5 (Plastocyanin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold205G001440 PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 4.7e-67
Identity = 138/166 (83.13%), Postives = 153/166 (92.17%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLKSSAAAKPTAAVRVPSPAAPKLTVRASLKDLGVAVAATAASAL 60
           MAAVTSAAVAIPSFTGLKSS+++KPT+A+R+PSPA+PKL+VRASLKD+GVAVAATAASAL
Sbjct: 1   MAAVTSAAVAIPSFTGLKSSSSSKPTSAIRLPSPASPKLSVRASLKDVGVAVAATAASAL 60

Query: 61  LASNALAIEIKLGSDDGGLVFEPKEFSVASGEKIVFKNNAGFPHNVLFDEDEVPSGVDVS 120
           LASNA+AIEI LG DDG L F P  F+VASGEKIVFKNNAGFPHNV+FDEDE+PSGVD  
Sbjct: 61  LASNAMAIEILLGGDDGSLAFVPNNFTVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDAG 120

Query: 121 KISMSEEDLLNAPGEEYSVSLTEKGTYSFYCSPHQGAGMVGKVTVN 167
           KISM EE+LLNAPGE Y V LTEKG+YSFYCSPHQGAGMVGKVTVN
Sbjct: 121 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 166

[Close]

BLAST of Lcy12g021710 vs. ExPASy TrEMBL
Match: A0A5D3E5P8 (Plastocyanin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007720 PE=3 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.3e-66
Identity = 137/166 (82.53%), Postives = 152/166 (91.57%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLKSSAAAKPTAAVRVPSPAAPKLTVRASLKDLGVAVAATAASAL 60
           MAAVTSAAVAIPSFTGLKSS+++KPT+A+R+PSPA+PKL+VRASLKD+GVAVAATAASAL
Sbjct: 1   MAAVTSAAVAIPSFTGLKSSSSSKPTSAIRLPSPASPKLSVRASLKDVGVAVAATAASAL 60

Query: 61  LASNALAIEIKLGSDDGGLVFEPKEFSVASGEKIVFKNNAGFPHNVLFDEDEVPSGVDVS 120
           LASNA+AIEI LG DDG L F P  F+VASGE IVFKNNAGFPHNV+FDEDE+PSGVD  
Sbjct: 61  LASNAMAIEILLGGDDGSLAFVPNNFTVASGETIVFKNNAGFPHNVVFDEDEIPSGVDAG 120

Query: 121 KISMSEEDLLNAPGEEYSVSLTEKGTYSFYCSPHQGAGMVGKVTVN 167
           KISM EE+LLNAPGE Y V LTEKG+YSFYCSPHQGAGMVGKVTVN
Sbjct: 121 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 166

[Close]

BLAST of Lcy12g021710 vs. ExPASy TrEMBL
Match: A0A1S3CRA6 (Plastocyanin OS=Cucumis melo OX=3656 GN=LOC103503851 PE=3 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.3e-66
Identity = 137/166 (82.53%), Postives = 152/166 (91.57%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLKSSAAAKPTAAVRVPSPAAPKLTVRASLKDLGVAVAATAASAL 60
           MAAVTSAAVAIPSFTGLKSS+++KPT+A+R+PSPA+PKL+VRASLKD+GVAVAATAASAL
Sbjct: 1   MAAVTSAAVAIPSFTGLKSSSSSKPTSAIRLPSPASPKLSVRASLKDVGVAVAATAASAL 60

Query: 61  LASNALAIEIKLGSDDGGLVFEPKEFSVASGEKIVFKNNAGFPHNVLFDEDEVPSGVDVS 120
           LASNA+AIEI LG DDG L F P  F+VASGE IVFKNNAGFPHNV+FDEDE+PSGVD  
Sbjct: 61  LASNAMAIEILLGGDDGSLAFVPNNFTVASGETIVFKNNAGFPHNVVFDEDEIPSGVDAG 120

Query: 121 KISMSEEDLLNAPGEEYSVSLTEKGTYSFYCSPHQGAGMVGKVTVN 167
           KISM EE+LLNAPGE Y V LTEKG+YSFYCSPHQGAGMVGKVTVN
Sbjct: 121 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 166

[Close]

BLAST of Lcy12g021710 vs. ExPASy TrEMBL
Match: A0A6J1FAV0 (Plastocyanin OS=Cucurbita moschata OX=3662 GN=LOC111443648 PE=3 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 6.8e-66
Identity = 140/167 (83.83%), Postives = 151/167 (90.42%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLKSSA-AAKPTAAVRVPSPAAPKLTVRASLKDLGVAVAATAASA 60
           MA VTSA VAIP+FTGLKS A A+KPTAAVRV SPA PKLTVRASLKD+GVAVAATAASA
Sbjct: 1   MATVTSATVAIPTFTGLKSPATASKPTAAVRVSSPAVPKLTVRASLKDIGVAVAATAASA 60

Query: 61  LLASNALAIEIKLGSDDGGLVFEPKEFSVASGEKIVFKNNAGFPHNVLFDEDEVPSGVDV 120
           LLASNALAIE+ LG DDG L F P +FSVA+GEKIVFKNNAGFPHNV+FDEDE+PSGVD 
Sbjct: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 SKISMSEEDLLNAPGEEYSVSLTEKGTYSFYCSPHQGAGMVGKVTVN 167
            KISM+EEDLLNAPGE Y V+LTEKG+YSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 167

[Close]

BLAST of Lcy12g021710 vs. ExPASy TrEMBL
Match: A0A6J1IFB6 (Plastocyanin OS=Cucurbita maxima OX=3661 GN=LOC111476724 PE=3 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 2.0e-65
Identity = 140/167 (83.83%), Postives = 151/167 (90.42%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLKSSA-AAKPTAAVRVPSPAAPKLTVRASLKDLGVAVAATAASA 60
           MA VTSA VAIPSFTGLK+SA A+K TAAVRV SP+ PKLTVRASLKDLGVAVAATAASA
Sbjct: 1   MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA 60

Query: 61  LLASNALAIEIKLGSDDGGLVFEPKEFSVASGEKIVFKNNAGFPHNVLFDEDEVPSGVDV 120
           LLASNALAIE+ LG DDG L F P +FSVA+GEKIVFKNNAGFPHNV+FDEDE+PSGVD 
Sbjct: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 SKISMSEEDLLNAPGEEYSVSLTEKGTYSFYCSPHQGAGMVGKVTVN 167
            KISM+EEDLLNAPGE Y V+LTEKG+YSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 167

[Close]

BLAST of Lcy12g021710 vs. NCBI nr
Match: KAA0063319.1 (plastocyanin [Cucumis melo var. makuwa])

HSP 1 Score: 263.8 bits (673), Expect = 9.7e-67
Identity = 138/166 (83.13%), Postives = 153/166 (92.17%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLKSSAAAKPTAAVRVPSPAAPKLTVRASLKDLGVAVAATAASAL 60
           MAAVTSAAVAIPSFTGLKSS+++KPT+A+R+PSPA+PKL+VRASLKD+GVAVAATAASAL
Sbjct: 1   MAAVTSAAVAIPSFTGLKSSSSSKPTSAIRLPSPASPKLSVRASLKDVGVAVAATAASAL 60

Query: 61  LASNALAIEIKLGSDDGGLVFEPKEFSVASGEKIVFKNNAGFPHNVLFDEDEVPSGVDVS 120
           LASNA+AIEI LG DDG L F P  F+VASGEKIVFKNNAGFPHNV+FDEDE+PSGVD  
Sbjct: 61  LASNAMAIEILLGGDDGSLAFVPNNFTVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDAG 120

Query: 121 KISMSEEDLLNAPGEEYSVSLTEKGTYSFYCSPHQGAGMVGKVTVN 167
           KISM EE+LLNAPGE Y V LTEKG+YSFYCSPHQGAGMVGKVTVN
Sbjct: 121 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 166

[Close]

BLAST of Lcy12g021710 vs. NCBI nr
Match: XP_008466451.1 (PREDICTED: plastocyanin [Cucumis melo] >TYK31457.1 plastocyanin [Cucumis melo var. makuwa])

HSP 1 Score: 261.5 bits (667), Expect = 4.8e-66
Identity = 137/166 (82.53%), Postives = 152/166 (91.57%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLKSSAAAKPTAAVRVPSPAAPKLTVRASLKDLGVAVAATAASAL 60
           MAAVTSAAVAIPSFTGLKSS+++KPT+A+R+PSPA+PKL+VRASLKD+GVAVAATAASAL
Sbjct: 1   MAAVTSAAVAIPSFTGLKSSSSSKPTSAIRLPSPASPKLSVRASLKDVGVAVAATAASAL 60

Query: 61  LASNALAIEIKLGSDDGGLVFEPKEFSVASGEKIVFKNNAGFPHNVLFDEDEVPSGVDVS 120
           LASNA+AIEI LG DDG L F P  F+VASGE IVFKNNAGFPHNV+FDEDE+PSGVD  
Sbjct: 61  LASNAMAIEILLGGDDGSLAFVPNNFTVASGETIVFKNNAGFPHNVVFDEDEIPSGVDAG 120

Query: 121 KISMSEEDLLNAPGEEYSVSLTEKGTYSFYCSPHQGAGMVGKVTVN 167
           KISM EE+LLNAPGE Y V LTEKG+YSFYCSPHQGAGMVGKVTVN
Sbjct: 121 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 166

[Close]

BLAST of Lcy12g021710 vs. NCBI nr
Match: XP_022937324.1 (plastocyanin [Cucurbita moschata])

HSP 1 Score: 260.0 bits (663), Expect = 1.4e-65
Identity = 140/167 (83.83%), Postives = 151/167 (90.42%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLKSSA-AAKPTAAVRVPSPAAPKLTVRASLKDLGVAVAATAASA 60
           MA VTSA VAIP+FTGLKS A A+KPTAAVRV SPA PKLTVRASLKD+GVAVAATAASA
Sbjct: 1   MATVTSATVAIPTFTGLKSPATASKPTAAVRVSSPAVPKLTVRASLKDIGVAVAATAASA 60

Query: 61  LLASNALAIEIKLGSDDGGLVFEPKEFSVASGEKIVFKNNAGFPHNVLFDEDEVPSGVDV 120
           LLASNALAIE+ LG DDG L F P +FSVA+GEKIVFKNNAGFPHNV+FDEDE+PSGVD 
Sbjct: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 SKISMSEEDLLNAPGEEYSVSLTEKGTYSFYCSPHQGAGMVGKVTVN 167
            KISM+EEDLLNAPGE Y V+LTEKG+YSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 167

[Close]

BLAST of Lcy12g021710 vs. NCBI nr
Match: XP_023534891.1 (plastocyanin [Cucurbita pepo subsp. pepo])

HSP 1 Score: 259.6 bits (662), Expect = 1.8e-65
Identity = 141/167 (84.43%), Postives = 151/167 (90.42%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLKSSA-AAKPTAAVRVPSPAAPKLTVRASLKDLGVAVAATAASA 60
           MA VTSA VAIPSFTGLKSSA A+K TAAVRV SPA PKLTVRASLKD+GVAVAATAASA
Sbjct: 1   MATVTSATVAIPSFTGLKSSATASKSTAAVRVSSPAVPKLTVRASLKDVGVAVAATAASA 60

Query: 61  LLASNALAIEIKLGSDDGGLVFEPKEFSVASGEKIVFKNNAGFPHNVLFDEDEVPSGVDV 120
           LLASNALAIE+ LG DDG L F P +FSVA+GEKIVFKNNAGFPHNV+FDEDE+PSGVD 
Sbjct: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 SKISMSEEDLLNAPGEEYSVSLTEKGTYSFYCSPHQGAGMVGKVTVN 167
            KISM+EEDLLNAPGE Y V+LTEKG+YSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 167

[Close]

BLAST of Lcy12g021710 vs. NCBI nr
Match: XP_038896134.1 (plastocyanin [Benincasa hispida])

HSP 1 Score: 259.2 bits (661), Expect = 2.4e-65
Identity = 139/167 (83.23%), Postives = 150/167 (89.82%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLKSS-AAAKPTAAVRVPSPAAPKLTVRASLKDLGVAVAATAASA 60
           MA VTS AVAIPSFTGLKSS AA+KPTAAVR+PSPA PK ++RASLKD+GVAVAATAA+A
Sbjct: 1   MATVTSPAVAIPSFTGLKSSGAASKPTAAVRIPSPAVPKHSIRASLKDVGVAVAATAATA 60

Query: 61  LLASNALAIEIKLGSDDGGLVFEPKEFSVASGEKIVFKNNAGFPHNVLFDEDEVPSGVDV 120
           LLASNA+AIEI LG DDG L F P  FSVASGEKIVFKNNAGFPHNV+FDEDE+PSGVD 
Sbjct: 61  LLASNAMAIEILLGGDDGSLAFVPNNFSVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 SKISMSEEDLLNAPGEEYSVSLTEKGTYSFYCSPHQGAGMVGKVTVN 167
            KISM+EEDLLNAPGE Y V LTEKG+YSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMNEEDLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 167

[Close]

BLAST of Lcy12g021710 vs. TAIR 10
Match: AT1G20340.1 (Cupredoxin superfamily protein )

HSP 1 Score: 216.9 bits (551), Expect = 1.3e-56
Identity = 117/168 (69.64%), Postives = 137/168 (81.55%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLKSSAAAKPTAAVRVPSP--AAPKLTVRASLKDLGVAVAATAAS 60
           MA+VTSA VAIPSFTGLK+S   K +A VR+ +   A+PKLTV++SLK+ GVA  A AAS
Sbjct: 1   MASVTSATVAIPSFTGLKAS-TIKSSATVRIQTAAVASPKLTVKSSLKNFGVAAVAAAAS 60

Query: 61  ALLASNALAIEIKLGSDDGGLVFEPKEFSVASGEKIVFKNNAGFPHNVLFDEDEVPSGVD 120
             LA NA+AIE+ LG  DG L F P +FS+A GEKIVFKNNAG+PHNV+FDEDE+PSGVD
Sbjct: 61  IALAGNAMAIEVLLGGGDGSLAFIPNDFSIAKGEKIVFKNNAGYPHNVVFDEDEIPSGVD 120

Query: 121 VSKISMSEEDLLNAPGEEYSVSLTEKGTYSFYCSPHQGAGMVGKVTVN 167
           V+KISM E+DLLN  GE Y V+LTE GTYSFYC+PHQGAGMVGKVTVN
Sbjct: 121 VAKISMDEQDLLNGAGETYEVALTEPGTYSFYCAPHQGAGMVGKVTVN 167

[Close]

BLAST of Lcy12g021710 vs. TAIR 10
Match: AT1G76100.1 (plastocyanin 1 )

HSP 1 Score: 208.8 bits (530), Expect = 3.4e-54
Identity = 113/174 (64.94%), Postives = 132/174 (75.86%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLKSSAAAKP---------TAAVRVPSPAAPKLTVRASLKDLGVA 60
           MAA+TSA V IPSFTGLK + ++KP         T+A R P    PKL +++SLKD GV 
Sbjct: 1   MAAITSATVTIPSFTGLKLAVSSKPKTLSTISRSTSATRAP----PKLALKSSLKDFGVI 60

Query: 61  VAATAASALLASNALAIEIKLGSDDGGLVFEPKEFSVASGEKIVFKNNAGFPHNVLFDED 120
             ATAAS +LA NA+A+E+ LGSDDG L F P EF+VA GEKIVFKNNAGFPHNV+FDED
Sbjct: 61  AVATAASIVLAGNAMAMEVLLGSDDGSLAFVPSEFTVAKGEKIVFKNNAGFPHNVVFDED 120

Query: 121 EVPSGVDVSKISMSEEDLLNAPGEEYSVSLTEKGTYSFYCSPHQGAGMVGKVTV 166
           E+PSGVD SKISM E  LLN  GE Y V+LTE G+Y FYC+PHQGAGMVGK+TV
Sbjct: 121 EIPSGVDASKISMDETALLNGAGETYEVTLTEPGSYGFYCAPHQGAGMVGKLTV 170

The following BLAST results are available for this feature:

BLAST of Lcy12g021710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P00289	5.9e-59	72.62	Plastocyanin, chloroplastic OS=Spinacia oleracea OX=3562 GN=PETE PE=1 SV=2	[more]
P11970	2.9e-58	70.83	Plastocyanin B, chloroplastic OS=Populus nigra OX=3691 GN=PETE PE=1 SV=2	[more]
P00299	8.5e-58	69.05	Plastocyanin A, chloroplastic OS=Populus nigra OX=3691 GN=PETE PE=1 SV=2	[more]
P16002	1.5e-57	70.24	Plastocyanin, chloroplastic OS=Pisum sativum OX=3888 GN=PETE PE=3 SV=1	[more]
P17340	1.9e-57	70.59	Plastocyanin, chloroplastic OS=Solanum lycopersicum OX=4081 GN=PETE PE=2 SV=1	[more]

BLAST of Lcy12g021710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VCJ5	4.7e-67	83.13	Plastocyanin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold205G001440 ...	[more]
A0A5D3E5P8	2.3e-66	82.53	Plastocyanin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007720 ...	[more]
A0A1S3CRA6	2.3e-66	82.53	Plastocyanin OS=Cucumis melo OX=3656 GN=LOC103503851 PE=3 SV=1	[more]
A0A6J1FAV0	6.8e-66	83.83	Plastocyanin OS=Cucurbita moschata OX=3662 GN=LOC111443648 PE=3 SV=1	[more]
A0A6J1IFB6	2.0e-65	83.83	Plastocyanin OS=Cucurbita maxima OX=3661 GN=LOC111476724 PE=3 SV=1	[more]

BLAST of Lcy12g021710 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0063319.1	9.7e-67	83.13	plastocyanin [Cucumis melo var. makuwa]	[more]
XP_008466451.1	4.8e-66	82.53	PREDICTED: plastocyanin [Cucumis melo] >TYK31457.1 plastocyanin [Cucumis melo va...	[more]
XP_022937324.1	1.4e-65	83.83	plastocyanin [Cucurbita moschata]	[more]
XP_023534891.1	1.8e-65	84.43	plastocyanin [Cucurbita pepo subsp. pepo]	[more]
XP_038896134.1	2.4e-65	83.23	plastocyanin [Benincasa hispida]	[more]

BLAST of Lcy12g021710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G20340.1	1.3e-56	69.64	Cupredoxin superfamily protein	[more]
AT1G76100.1	3.4e-54	64.94	plastocyanin 1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002387	Plastocyanin	PRINTS	PR00157	PLASTOCYANIN	coord: 145..164 score: 83.17 coord: 73..92 score: 58.66 coord: 96..114 score: 79.46
IPR002387	Plastocyanin	TIGRFAM	TIGR02656	TIGR02656	coord: 68..166 e-value: 2.7E-43 score: 144.4
IPR002387	Plastocyanin	CDD	cd04219	Plastocyanin	coord: 68..166 e-value: 1.30612E-51 score: 158.301
IPR001235	Blue (type 1) copper protein, plastocyanin-type	PRINTS	PR00156	COPPERBLUE	coord: 143..157 score: 53.89 coord: 87..100 score: 40.18 coord: 102..117 score: 51.96
IPR000923	Blue (type 1) copper domain	PFAM	PF00127	Copper-bind	coord: 69..166 e-value: 2.3E-35 score: 121.0
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 68..166 e-value: 1.5E-29 score: 104.5
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 66..166
None	No IPR available	PANTHER	PTHR34192	PLASTOCYANIN MAJOR ISOFORM, CHLOROPLASTIC-RELATED	coord: 1..166
None	No IPR available	PANTHER	PTHR34192:SF11	PLASTOCYANIN	coord: 1..166
IPR028871	Blue (type 1) copper protein, binding site	PROSITE	PS00196	COPPER_BLUE	coord: 145..159

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy12g021710.1	Lcy12g021710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0009535	chloroplast thylakoid membrane
molecular_function	GO:0005507	copper ion binding
molecular_function	GO:0009055	electron transfer activity