Lcy12g019730 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy12g019730
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	BHLH transcription factor
Location	Chr12: 47017976 .. 47018843 (+)
RNA-Seq Expression	Lcy12g019730
Synteny	Lcy12g019730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCTTACCCTCTGCAATTTCTTTGCTTCACGGCGCAAATTCTGGTCGACTTCTCTCTCTTTCATCCGTTTCTTTAGTGACTTGCAAAGGTGCAAGTGCAGAATCTAACAAGAGATATATAATCTATGGAAAATGATCATCTCAAATCGGAGGATCAGATGGAGATTATCATGATGATGCAACAGATGGACAAAATCCCAGAATTTTGCAGTGGTTACAATGATCTCTCACCGCCGTCTGATTTCAGCTCAAGCAGCAACATCAGCACCTCCGACCCACATTGCCTAGAAAACCTTCAACAAGCCGCAGCGTCATCACCTCCATTCATGAACCTACCTTTACCCCCAACTGTTGAACAGCACTCGGTTTTGTCCGGAACAGCTCCATTCCCCACCGCTTCACGGTGGCGAAATTCAGTGGTTTCCGGTGGTGAAACGGACTCACAGAAGCAGAGGTCGGTGGCGGCTATGAGGGAGATGATATTCCGAATGGCAGTGATGCAACCAATTCACATAGACCCAGAATCGGTGAAGCCACCAAAAAGGAGGAACGTGAAGATTTCAACAGACCCACAAAGTGTAGCGGCTCGGCATAGGAGAGAGAGAATAAGTGAGAGAATTAGGATACTTCAAAGACTGGTTCCTGGAGGTACCAAAATGGATACAGCTTCGATGTTGGACGAGGCTATACATTACGTTAAATTCTTAAAGAGCCAGGTGCAATCACTCGAAAGAGCAGCCGCTAACAGGCCAATCAGTGGTGCAGCTGCTGGCGTAGGGTTTCCTTTGGAAATGTCAAGTGGGAGCTATGTTCCCATGGCAAAACCTTCCCCAATGCCTCACAACGTCCAGCAATTCAGAGATGCTTAA

mRNA sequence

TCCTTACCCTCTGCAATTTCTTTGCTTCACGGCGCAAATTCTGGTCGACTTCTCTCTCTTTCATCCGTTTCTTTAGTGACTTGCAAAGGTGCAAGTGCAGAATCTAACAAGAGATATATAATCTATGGAAAATGATCATCTCAAATCGGAGGATCAGATGGAGATTATCATGATGATGCAACAGATGGACAAAATCCCAGAATTTTGCAGTGGTTACAATGATCTCTCACCGCCGTCTGATTTCAGCTCAAGCAGCAACATCAGCACCTCCGACCCACATTGCCTAGAAAACCTTCAACAAGCCGCAGCGTCATCACCTCCATTCATGAACCTACCTTTACCCCCAACTGTTGAACAGCACTCGGTTTTGTCCGGAACAGCTCCATTCCCCACCGCTTCACGGTGGCGAAATTCAGTGGTTTCCGGTGGTGAAACGGACTCACAGAAGCAGAGGTCGGTGGCGGCTATGAGGGAGATGATATTCCGAATGGCAGTGATGCAACCAATTCACATAGACCCAGAATCGGTGAAGCCACCAAAAAGGAGGAACGTGAAGATTTCAACAGACCCACAAAGTGTAGCGGCTCGGCATAGGAGAGAGAGAATAAGTGAGAGAATTAGGATACTTCAAAGACTGGTTCCTGGAGGTACCAAAATGGATACAGCTTCGATGTTGGACGAGGCTATACATTACGTTAAATTCTTAAAGAGCCAGGTGCAATCACTCGAAAGAGCAGCCGCTAACAGGCCAATCAGTGGTGCAGCTGCTGGCGTAGGGTTTCCTTTGGAAATGTCAAGTGGGAGCTATGTTCCCATGGCAAAACCTTCCCCAATGCCTCACAACGTCCAGCAATTCAGAGATGCTTAA

Coding sequence (CDS)

ATGGAAAATGATCATCTCAAATCGGAGGATCAGATGGAGATTATCATGATGATGCAACAGATGGACAAAATCCCAGAATTTTGCAGTGGTTACAATGATCTCTCACCGCCGTCTGATTTCAGCTCAAGCAGCAACATCAGCACCTCCGACCCACATTGCCTAGAAAACCTTCAACAAGCCGCAGCGTCATCACCTCCATTCATGAACCTACCTTTACCCCCAACTGTTGAACAGCACTCGGTTTTGTCCGGAACAGCTCCATTCCCCACCGCTTCACGGTGGCGAAATTCAGTGGTTTCCGGTGGTGAAACGGACTCACAGAAGCAGAGGTCGGTGGCGGCTATGAGGGAGATGATATTCCGAATGGCAGTGATGCAACCAATTCACATAGACCCAGAATCGGTGAAGCCACCAAAAAGGAGGAACGTGAAGATTTCAACAGACCCACAAAGTGTAGCGGCTCGGCATAGGAGAGAGAGAATAAGTGAGAGAATTAGGATACTTCAAAGACTGGTTCCTGGAGGTACCAAAATGGATACAGCTTCGATGTTGGACGAGGCTATACATTACGTTAAATTCTTAAAGAGCCAGGTGCAATCACTCGAAAGAGCAGCCGCTAACAGGCCAATCAGTGGTGCAGCTGCTGGCGTAGGGTTTCCTTTGGAAATGTCAAGTGGGAGCTATGTTCCCATGGCAAAACCTTCCCCAATGCCTCACAACGTCCAGCAATTCAGAGATGCTTAA

Protein sequence

MENDHLKSEDQMEIIMMMQQMDKIPEFCSGYNDLSPPSDFSSSSNISTSDPHCLENLQQAAASSPPFMNLPLPPTVEQHSVLSGTAPFPTASRWRNSVVSGGETDSQKQRSVAAMREMIFRMAVMQPIHIDPESVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKSQVQSLERAAANRPISGAAAGVGFPLEMSSGSYVPMAKPSPMPHNVQQFRDA

Homology

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BLAST of Lcy12g019730 vs. ExPASy Swiss-Prot
Match: Q9SND4 (Transcription factor HEC2 OS=Arabidopsis thaliana OX=3702 GN=HEC2 PE=1 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.0e-43
Identity = 112/192 (58.33%), Postives = 129/192 (67.19%), Query Frame = 0


Query: 16  MMMQQMDKIPEFCSGYNDLSPPSDFSSSSNISTSDPHCLENLQQAAASSPPFMNLPLPPT 75
           MMMQQM+K+PE  S  N    P +    S  +T               +P   +LP   T
Sbjct: 10  MMMQQMEKLPEHFSNSNPNPNPHNIMMLSESNT----------HPFFFNPTHSHLPFDQT 69

Query: 76  VEQH--SVLSGTAPFPTASRWRNSVVSGGETDSQKQRSVAAMREMIFRMAVMQPIHIDPE 135
           +  H   +    AP P++S        GG +D+    ++AAMREMIFR+AVMQPIHIDPE
Sbjct: 70  MPHHQPGLNFRYAPSPSSSLPEK---RGGCSDN---ANMAAMREMIFRIAVMQPIHIDPE 129

Query: 136 SVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKF 195
           SVKPPKR+NV+IS DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKF
Sbjct: 130 SVKPPKRKNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKF 185

Query: 196 LKSQVQSLERAA 206
           LK QVQSLE  A
Sbjct: 190 LKKQVQSLEEHA 185

[Close]

BLAST of Lcy12g019730 vs. ExPASy Swiss-Prot
Match: Q9FHA7 (Transcription factor HEC1 OS=Arabidopsis thaliana OX=3702 GN=HEC1 PE=1 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 5.7e-42
Identity = 107/203 (52.71%), Postives = 131/203 (64.53%), Query Frame = 0


Query: 16  MMMQQMDKIPEFCSGYNDLSPPSDFSSSSNISTSDPHCLENLQQAAASSPPFMNLPLPPT 75
           MMM QM+K+PEFC+  +    P   ++   +  S  +  ++    + ++ P         
Sbjct: 8   MMMHQMEKLPEFCNPNSSFFSPDHNNTYPFLFNSTHYQSDH----SMTNEPGFRYGSGLL 67

Query: 76  VEQHSVLSGTAPFPTASRWRNSVVSGGETDSQKQRSVAAMREMIFRMAVMQPIHIDPESV 135
               S+   TA        RN+       ++    ++AAMREMIFR+AVMQPIHIDPE+V
Sbjct: 68  TNPSSISPNTAYSSVFLDKRNN-----SNNNNNGTNMAAMREMIFRIAVMQPIHIDPEAV 127

Query: 136 KPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 195
           KPPKRRNV+IS DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK
Sbjct: 128 KPPKRRNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 187

Query: 196 SQVQSLERAAANRPISGAAAGVG 219
            QVQSLE  A    ++G   G G
Sbjct: 188 KQVQSLEEQAV---VTGGGGGGG 198

[Close]

BLAST of Lcy12g019730 vs. ExPASy Swiss-Prot
Match: Q9LXD8 (Transcription factor HEC3 OS=Arabidopsis thaliana OX=3702 GN=HEC3 PE=1 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 3.1e-32
Identity = 86/180 (47.78%), Postives = 112/180 (62.22%), Query Frame = 0


Query: 41  SSSSNISTSDPHCLENLQQAAASSPPFMNLPLPPTVEQHSVLSGTAPFP-------TASR 100
           SS++N    D H   N            N P+   ++Q++ L    PF        ++S 
Sbjct: 22  SSNNNNKNDDHHHQHN------------NDPIGMAMDQYTQLHIFNPFSSSHFPPLSSSL 81

Query: 101 WRNSVVSGGETDSQKQ----RSVAAMREMIFRMAVMQPIHIDPESVKPPKRRNVKISTDP 160
              +++SG + D + +      + AM+EM++++A MQ + IDP +VK PKRRNV+IS DP
Sbjct: 82  TTTTLLSGDQEDDEDEEEPLEELGAMKEMMYKIAAMQSVDIDPATVKKPKRRNVRISDDP 141

Query: 161 QSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKSQVQSLERAAANRP 210
           QSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAI YVKFLK Q++ L       P
Sbjct: 142 QSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLNNNTGYTP 189

[Close]

BLAST of Lcy12g019730 vs. ExPASy Swiss-Prot
Match: Q8S3D2 (Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 4.3e-29
Identity = 71/132 (53.79%), Postives = 97/132 (73.48%), Query Frame = 0


Query: 111 SVAAMREMIFRMAVMQPIHIDPESVKPPKRRNVKISTDPQSVAARHRRERISERIRILQR 170
           ++A M+EMI+R A  +P++   E V+ PKR+NVKISTDPQ+VAAR RRERISE+IR+LQ 
Sbjct: 241 AIAQMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQT 300

Query: 171 LVPGGTKMDTASMLDEAIHYVKFLKSQVQSLERAAA---NRPISGAAAGVGFPLEMSSGS 230
           LVPGGTKMDTASMLDEA +Y+KFL++QV++LE          +S ++A   FPL     S
Sbjct: 301 LVPGGTKMDTASMLDEAANYLKFLRAQVKALENLRPKLDQTNLSFSSAPTSFPL--FHPS 360

Query: 231 YVPMAKPSPMPH 240
           ++P+  P+ + H
Sbjct: 361 FLPLQNPNQIHH 370

[Close]

BLAST of Lcy12g019730 vs. ExPASy Swiss-Prot
Match: O81313 (Transcription factor IND OS=Arabidopsis thaliana OX=3702 GN=IND PE=1 SV=3)

HSP 1 Score: 125.2 bits (313), Expect = 1.0e-27
Identity = 63/100 (63.00%), Postives = 78/100 (78.00%), Query Frame = 0


Query: 103 ETDSQKQRSVAAMREMIFRMAVMQPIHIDPESVKPPKRRNVKISTDPQSVAARHRRERIS 162
           + D +    + AM+EM + +AVMQP+ IDP +V  P RRNV+IS DPQ+V AR RRERIS
Sbjct: 76  DEDEEYDEDMDAMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRERIS 135

Query: 163 ERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKSQVQSLE 203
           E+IRIL+R+VPGG KMDTASMLDEAI Y KFLK QV+ L+
Sbjct: 136 EKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQ 175

[Close]

BLAST of Lcy12g019730 vs. ExPASy TrEMBL
Match: A0A6J1IKS0 (transcription factor HEC2-like OS=Cucurbita maxima OX=3661 GN=LOC111476512 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 2.8e-92
Identity = 199/251 (79.28%), Postives = 212/251 (84.46%), Query Frame = 0


Query: 1   MENDHLKSEDQMEIIMMMQQMDKIPEFCSGYNDLSPPSDFSSSSNISTSDPHCLENLQQA 60
           MEND LKSEDQMEI+MMMQQM+KIPEF   YN LSPPSD  SS   ST+DPHCLE LQQA
Sbjct: 1   MENDDLKSEDQMEIMMMMQQMEKIPEF---YNHLSPPSDHFSS---STTDPHCLETLQQA 60

Query: 61  A-ASSPPFMNLPLPPTVEQHSVLSGTAPFPTASRWRNSVVSGGETDSQKQRSVAAMREMI 120
           A +SSPPF N  LP  + Q      T PFPT+SRWRN   SGGETD QKQRSVAAMREMI
Sbjct: 61  AESSSPPFTN-NLPYNLPQ------TVPFPTSSRWRN---SGGETDLQKQRSVAAMREMI 120

Query: 121 FRMAVMQPIHIDPESVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMD 180
           FR+AVMQPI IDPE+VKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMD
Sbjct: 121 FRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMD 180

Query: 181 TASMLDEAIHYVKFLKSQVQSLERAAANRPISGAAA---GVGFPLEMSSGSYVPMAKPSP 240
           TASMLDEAIHYVKFLK+QVQSLERAA NRP+  AAA   GVGFPLEMSSGSYVPMAKPS 
Sbjct: 181 TASMLDEAIHYVKFLKTQVQSLERAATNRPLPDAAAPASGVGFPLEMSSGSYVPMAKPSQ 235

Query: 241 MPHNVQQFRDA 248
           M HN++Q+ DA
Sbjct: 241 MTHNLEQYGDA 235

[Close]

BLAST of Lcy12g019730 vs. ExPASy TrEMBL
Match: A0A6J1FE54 (transcription factor HEC2-like OS=Cucurbita moschata OX=3662 GN=LOC111443152 PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 1.1e-91
Identity = 199/256 (77.73%), Postives = 212/256 (82.81%), Query Frame = 0


Query: 1   MENDHLKSEDQMEIIMMMQQMDKIPEFCSGYNDLSPPSDFSSSSNISTSDPHCLENLQQA 60
           MEND LKSEDQMEI+MMMQQM+KIPEF   YN LSPPSD  SS   ST+DPHCLE LQQA
Sbjct: 1   MENDDLKSEDQMEIMMMMQQMEKIPEF---YNHLSPPSDHFSS---STTDPHCLETLQQA 60

Query: 61  A-ASSPPFMNLPLPPTVEQHSVLSGTAPFPTASRWRNSVVSGGETDSQKQRSVAAMREMI 120
           A +SSPPF N  LP  + Q      T PFPT+SRWRN   SGGETD QKQRSVAAMREMI
Sbjct: 61  AESSSPPFTN-NLPYNLPQ------TVPFPTSSRWRN---SGGETDLQKQRSVAAMREMI 120

Query: 121 FRMAVMQPIHIDPESVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMD 180
           FR+AVMQPI IDPE+VKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMD
Sbjct: 121 FRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMD 180

Query: 181 TASMLDEAIHYVKFLKSQVQSLERAAANRPISGAAA--------GVGFPLEMSSGSYVPM 240
           TASMLDEAIHYVKFLK+QVQSLERAA NRP+  AAA        GVGFPLEMSSGSYVPM
Sbjct: 181 TASMLDEAIHYVKFLKTQVQSLERAATNRPLPDAAAAAAAAAAPGVGFPLEMSSGSYVPM 240

Query: 241 AKPSPMPHNVQQFRDA 248
           AKPS M HN++Q+ DA
Sbjct: 241 AKPSQMTHNLEQYGDA 240

[Close]

BLAST of Lcy12g019730 vs. ExPASy TrEMBL
Match: A0A1S3BU58 (transcription factor HEC2-like OS=Cucumis melo OX=3656 GN=LOC103493551 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 2.5e-72
Identity = 176/250 (70.40%), Postives = 191/250 (76.40%), Query Frame = 0


Query: 1   MENDHLKSEDQMEIIMMMQQMDKIPEFCSGYNDLSPP-SDFSSSSNISTSDPHCLENLQQ 60
           MEND LKSEDQMEI+MMMQQM+KIPEF   YND SPP SDFSS+   +T +PHC      
Sbjct: 1   MENDDLKSEDQMEIMMMMQQMEKIPEF---YNDFSPPSSDFSST---TTDNPHC----HL 60

Query: 61  AAASSPPFM------NLPLPPTVEQHSVLSGTAPFP--TASRWRNSVVSGGETDS-QKQR 120
            ++SSPP        N   P    Q S    T PFP  + SRWRNS     ET+S QKQR
Sbjct: 61  DSSSSPPLFINNNNSNNNPPYNFPQQS----TVPFPGTSPSRWRNS--GSCETESLQKQR 120

Query: 121 SVAAMREMIFRMAVMQPIHIDPESVKPPKRRNVKISTDPQSVAARHRRERISERIRILQR 180
           SVAAMREMIFR+AVMQPIHIDPE+VKPPKRRNVKISTDPQSVAARHRRERISERIRILQR
Sbjct: 121 SVAAMREMIFRIAVMQPIHIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQR 180

Query: 181 LVPGGTKMDTASMLDEAIHYVKFLKSQVQSLERAA---ANRPISGAAA-GVGFPLEMSSG 237
           LVPGGTKMDTASMLDEAIHYVKFLK+QVQSLERAA    NRPI+G  A  VGFPLEMSSG
Sbjct: 181 LVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAVSTGNRPITGGGAPSVGFPLEMSSG 234

[Close]

BLAST of Lcy12g019730 vs. ExPASy TrEMBL
Match: A0A0A0L0B3 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G639900 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 2.1e-71
Identity = 173/246 (70.33%), Postives = 190/246 (77.24%), Query Frame = 0


Query: 1   MENDHLKSEDQMEIIMMMQQMDKIPEFCSGYNDLSPP-SDFSSSSNISTSDPHCLENLQQ 60
           MEND LKSEDQMEI+MMMQQM+KIPEF   YND SPP SDFSS+   +T  PHC      
Sbjct: 1   MENDDLKSEDQMEIMMMMQQMEKIPEF---YNDFSPPSSDFSST---TTDHPHC----HL 60

Query: 61  AAASSPPFM-------NLPLPPTVEQHSVLSGTAPFP--TASRWRNSVVSGGETDS-QKQ 120
            ++SSPP         N   PP    +     T PFP  ++SRWRNS     ET+S QKQ
Sbjct: 61  DSSSSPPLFINNNSNNNSNNPP---YNFPQQSTVPFPGTSSSRWRNS--GSCETESLQKQ 120

Query: 121 RSVAAMREMIFRMAVMQPIHIDPESVKPPKRRNVKISTDPQSVAARHRRERISERIRILQ 180
           RSVAAMREMIFR+AVMQPIHIDPE+VKPPKRRNVKISTDPQSVAARHRRERISERIRILQ
Sbjct: 121 RSVAAMREMIFRIAVMQPIHIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQ 180

Query: 181 RLVPGGTKMDTASMLDEAIHYVKFLKSQVQSLERA---AANRPIS--GAAAGVGFPLEMS 231
           RLVPGGTKMDTASMLDEAIHYVKFLK+QVQSLERA   A NRPI+  GA + VGFPLEMS
Sbjct: 181 RLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAVSAGNRPITGVGAPSSVGFPLEMS 231

[Close]

BLAST of Lcy12g019730 vs. ExPASy TrEMBL
Match: A0A6J1ACP4 (transcription factor HEC2-like OS=Herrania umbratica OX=108875 GN=LOC110417094 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 4.8e-68
Identity = 166/266 (62.41%), Postives = 189/266 (71.05%), Query Frame = 0


Query: 1   MENDHLKS--EDQMEIIMMMQQMDKIPEFCSGYND---LSP-----PSDFSSSSNISTSD 60
           ME D LKS  E+QM  +MMM QMDK+PEF   YND   LSP      S  SS+++IST+ 
Sbjct: 1   MEIDQLKSATEEQM-AMMMMVQMDKLPEFYGAYNDVVELSPAELAGASSNSSNNSISTAT 60

Query: 61  PHCLENLQQAAASSPPFMNLP-----LPPTVEQHSVLSGTAPFPTASRWRNSVVSGGETD 120
           PH +EN      +SPPFMNLP        T  Q +   G    P ++RWR +  S G T 
Sbjct: 61  PHFVEN--PHVGNSPPFMNLPTNISFTGSTPVQEAGPPGFLSSPGSARWRGAGESSGATA 120

Query: 121 ----SQKQRSVAAMREMIFRMAVMQPIHIDPESVKPPKRRNVKISTDPQSVAARHRRERI 180
               SQK+ S+AAMREMIFR+A MQPIHIDPESVKPPKRRNV+IS DPQSVAARHRRERI
Sbjct: 121 FSTLSQKKNSMAAMREMIFRIAAMQPIHIDPESVKPPKRRNVRISKDPQSVAARHRRERI 180

Query: 181 SERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKSQVQSLERAAANRPISGAAAGVGFPL 240
           SERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK+QVQSLER AANRP     AG+GFP+
Sbjct: 181 SERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERVAANRP-----AGIGFPV 240

Query: 241 EMSSGSYVPMAKPSPMPHNVQQFRDA 248
            MS+GS++PM K      N QQF DA
Sbjct: 241 AMSNGSFLPMGKAYQPTQNAQQFGDA 258

[Close]

BLAST of Lcy12g019730 vs. NCBI nr
Match: XP_022975973.1 (transcription factor HEC2-like [Cucurbita maxima])

HSP 1 Score: 348.2 bits (892), Expect = 5.8e-92
Identity = 199/251 (79.28%), Postives = 212/251 (84.46%), Query Frame = 0


Query: 1   MENDHLKSEDQMEIIMMMQQMDKIPEFCSGYNDLSPPSDFSSSSNISTSDPHCLENLQQA 60
           MEND LKSEDQMEI+MMMQQM+KIPEF   YN LSPPSD  SS   ST+DPHCLE LQQA
Sbjct: 1   MENDDLKSEDQMEIMMMMQQMEKIPEF---YNHLSPPSDHFSS---STTDPHCLETLQQA 60

Query: 61  A-ASSPPFMNLPLPPTVEQHSVLSGTAPFPTASRWRNSVVSGGETDSQKQRSVAAMREMI 120
           A +SSPPF N  LP  + Q      T PFPT+SRWRN   SGGETD QKQRSVAAMREMI
Sbjct: 61  AESSSPPFTN-NLPYNLPQ------TVPFPTSSRWRN---SGGETDLQKQRSVAAMREMI 120

Query: 121 FRMAVMQPIHIDPESVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMD 180
           FR+AVMQPI IDPE+VKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMD
Sbjct: 121 FRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMD 180

Query: 181 TASMLDEAIHYVKFLKSQVQSLERAAANRPISGAAA---GVGFPLEMSSGSYVPMAKPSP 240
           TASMLDEAIHYVKFLK+QVQSLERAA NRP+  AAA   GVGFPLEMSSGSYVPMAKPS 
Sbjct: 181 TASMLDEAIHYVKFLKTQVQSLERAATNRPLPDAAAPASGVGFPLEMSSGSYVPMAKPSQ 235

Query: 241 MPHNVQQFRDA 248
           M HN++Q+ DA
Sbjct: 241 MTHNLEQYGDA 235

[Close]

BLAST of Lcy12g019730 vs. NCBI nr
Match: XP_023536625.1 (transcription factor HEC2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 347.8 bits (891), Expect = 7.6e-92
Identity = 198/252 (78.57%), Postives = 213/252 (84.52%), Query Frame = 0


Query: 1   MENDHLKSEDQMEIIMMMQQMDKIPEFCSGYNDLSPPSDFSSSSNISTSDPHCLENLQQA 60
           MEND LKSEDQMEI+MMMQQM+KIPEF   YN LSPPSD  SS   ST+DPHCLE LQQA
Sbjct: 1   MENDDLKSEDQMEIMMMMQQMEKIPEF---YNHLSPPSDHFSS---STTDPHCLETLQQA 60

Query: 61  A-ASSPPFMNLPLPPTVEQHSVLSGTAPFPTASRWRNSVVSGGETDSQKQRSVAAMREMI 120
           A +SSPPF N  LP  + Q      T PFPT+SRWRN   SGGETD QKQRSVAAMREMI
Sbjct: 61  AESSSPPFTN-NLPYNLPQ------TVPFPTSSRWRN---SGGETDLQKQRSVAAMREMI 120

Query: 121 FRMAVMQPIHIDPESVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMD 180
           FR+AVMQPI IDPE+VKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMD
Sbjct: 121 FRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMD 180

Query: 181 TASMLDEAIHYVKFLKSQVQSLERAAANRPI----SGAAAGVGFPLEMSSGSYVPMAKPS 240
           TASMLDEAIHYVKFLK+QVQSLERAA NRP+    + AA+GVGFPLEMSSGSYVPMAKPS
Sbjct: 181 TASMLDEAIHYVKFLKTQVQSLERAATNRPLPDAAAAAASGVGFPLEMSSGSYVPMAKPS 236

Query: 241 PMPHNVQQFRDA 248
            M HN++Q+ DA
Sbjct: 241 QMTHNLEQYGDA 236

[Close]

BLAST of Lcy12g019730 vs. NCBI nr
Match: XP_022936595.1 (transcription factor HEC2-like [Cucurbita moschata])

HSP 1 Score: 346.3 bits (887), Expect = 2.2e-91
Identity = 199/256 (77.73%), Postives = 212/256 (82.81%), Query Frame = 0


Query: 1   MENDHLKSEDQMEIIMMMQQMDKIPEFCSGYNDLSPPSDFSSSSNISTSDPHCLENLQQA 60
           MEND LKSEDQMEI+MMMQQM+KIPEF   YN LSPPSD  SS   ST+DPHCLE LQQA
Sbjct: 1   MENDDLKSEDQMEIMMMMQQMEKIPEF---YNHLSPPSDHFSS---STTDPHCLETLQQA 60

Query: 61  A-ASSPPFMNLPLPPTVEQHSVLSGTAPFPTASRWRNSVVSGGETDSQKQRSVAAMREMI 120
           A +SSPPF N  LP  + Q      T PFPT+SRWRN   SGGETD QKQRSVAAMREMI
Sbjct: 61  AESSSPPFTN-NLPYNLPQ------TVPFPTSSRWRN---SGGETDLQKQRSVAAMREMI 120

Query: 121 FRMAVMQPIHIDPESVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMD 180
           FR+AVMQPI IDPE+VKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMD
Sbjct: 121 FRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMD 180

Query: 181 TASMLDEAIHYVKFLKSQVQSLERAAANRPISGAAA--------GVGFPLEMSSGSYVPM 240
           TASMLDEAIHYVKFLK+QVQSLERAA NRP+  AAA        GVGFPLEMSSGSYVPM
Sbjct: 181 TASMLDEAIHYVKFLKTQVQSLERAATNRPLPDAAAAAAAAAAPGVGFPLEMSSGSYVPM 240

Query: 241 AKPSPMPHNVQQFRDA 248
           AKPS M HN++Q+ DA
Sbjct: 241 AKPSQMTHNLEQYGDA 240

[Close]

BLAST of Lcy12g019730 vs. NCBI nr
Match: KAG7025068.1 (Transcription factor HEC2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 345.9 bits (886), Expect = 2.9e-91
Identity = 197/253 (77.87%), Postives = 213/253 (84.19%), Query Frame = 0


Query: 1   MENDHLKSEDQMEIIMMMQQMDKIPEFCSGYNDLSPPSDFSSSSNISTSDPHCLENLQQA 60
           MEND LKSEDQMEI+MMMQQM+KIPEF   YN LSPPSD  SS   ST+DPHCLE LQQA
Sbjct: 1   MENDDLKSEDQMEIMMMMQQMEKIPEF---YNHLSPPSDHFSS---STTDPHCLETLQQA 60

Query: 61  A-ASSPPFMNLPLPPTVEQHSVLSGTAPFPTASRWRNSVVSGGETDSQKQRSVAAMREMI 120
           A +SSPPF N  LP  + Q      T PFPT+SRWRN   SGGETD QKQRSVAAMREMI
Sbjct: 61  AESSSPPFTN-NLPYNLPQ------TVPFPTSSRWRN---SGGETDLQKQRSVAAMREMI 120

Query: 121 FRMAVMQPIHIDPESVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMD 180
           FR+AVMQPI IDPE+VKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMD
Sbjct: 121 FRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMD 180

Query: 181 TASMLDEAIHYVKFLKSQVQSLERAAANRPI-----SGAAAGVGFPLEMSSGSYVPMAKP 240
           TASMLDEAIHYVKFLK+QVQSLERAA NRP+     + AA+GVGFPLEMSSGSYVPMAKP
Sbjct: 181 TASMLDEAIHYVKFLKTQVQSLERAATNRPLPDAAAAAAASGVGFPLEMSSGSYVPMAKP 237

Query: 241 SPMPHNVQQFRDA 248
           S + HN++Q+ DA
Sbjct: 241 SQITHNLEQYGDA 237

[Close]

BLAST of Lcy12g019730 vs. NCBI nr
Match: KAG6591384.1 (Transcription factor HEC2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 329.3 bits (843), Expect = 2.8e-86
Identity = 188/243 (77.37%), Postives = 203/243 (83.54%), Query Frame = 0


Query: 12  MEIIMMMQQMDKIPEFCSGYNDLSPPSDFSSSSNISTSDPHCLENLQQAA-ASSPPFMNL 71
           MEI+MMMQQM+KIPEF   YN LSPPSD  SS   ST+DPHCLE LQQAA +SSPPF N 
Sbjct: 1   MEIMMMMQQMEKIPEF---YNHLSPPSDHFSS---STTDPHCLETLQQAAESSSPPFTN- 60

Query: 72  PLPPTVEQHSVLSGTAPFPTASRWRNSVVSGGETDSQKQRSVAAMREMIFRMAVMQPIHI 131
            LP  + Q      T PFPT+SRWRN   SGGETD QKQRSVAAMREMIFR+AVMQPI I
Sbjct: 61  NLPYNLPQ------TVPFPTSSRWRN---SGGETDLQKQRSVAAMREMIFRIAVMQPIQI 120

Query: 132 DPESVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHY 191
           DPE+VKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHY
Sbjct: 121 DPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHY 180

Query: 192 VKFLKSQVQSLERAAANRPI------SGAAAGVGFPLEMSSGSYVPMAKPSPMPHNVQQF 248
           VKFLK+QVQSLERAA NRP+      + AA+GVGFPLEMSSGSYVPMAKPS M HN++Q+
Sbjct: 181 VKFLKTQVQSLERAATNRPLPDAAAAAAAASGVGFPLEMSSGSYVPMAKPSQMTHNLEQY 227

[Close]

BLAST of Lcy12g019730 vs. TAIR 10
Match: AT3G50330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 178.3 bits (451), Expect = 7.4e-45
Identity = 112/192 (58.33%), Postives = 129/192 (67.19%), Query Frame = 0


Query: 16  MMMQQMDKIPEFCSGYNDLSPPSDFSSSSNISTSDPHCLENLQQAAASSPPFMNLPLPPT 75
           MMMQQM+K+PE  S  N    P +    S  +T               +P   +LP   T
Sbjct: 10  MMMQQMEKLPEHFSNSNPNPNPHNIMMLSESNT----------HPFFFNPTHSHLPFDQT 69

Query: 76  VEQH--SVLSGTAPFPTASRWRNSVVSGGETDSQKQRSVAAMREMIFRMAVMQPIHIDPE 135
           +  H   +    AP P++S        GG +D+    ++AAMREMIFR+AVMQPIHIDPE
Sbjct: 70  MPHHQPGLNFRYAPSPSSSLPEK---RGGCSDN---ANMAAMREMIFRIAVMQPIHIDPE 129

Query: 136 SVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKF 195
           SVKPPKR+NV+IS DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKF
Sbjct: 130 SVKPPKRKNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKF 185

Query: 196 LKSQVQSLERAA 206
           LK QVQSLE  A
Sbjct: 190 LKKQVQSLEEHA 185

[Close]

BLAST of Lcy12g019730 vs. TAIR 10
Match: AT5G67060.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 172.6 bits (436), Expect = 4.1e-43
Identity = 107/203 (52.71%), Postives = 131/203 (64.53%), Query Frame = 0


Query: 16  MMMQQMDKIPEFCSGYNDLSPPSDFSSSSNISTSDPHCLENLQQAAASSPPFMNLPLPPT 75
           MMM QM+K+PEFC+  +    P   ++   +  S  +  ++    + ++ P         
Sbjct: 8   MMMHQMEKLPEFCNPNSSFFSPDHNNTYPFLFNSTHYQSDH----SMTNEPGFRYGSGLL 67

Query: 76  VEQHSVLSGTAPFPTASRWRNSVVSGGETDSQKQRSVAAMREMIFRMAVMQPIHIDPESV 135
               S+   TA        RN+       ++    ++AAMREMIFR+AVMQPIHIDPE+V
Sbjct: 68  TNPSSISPNTAYSSVFLDKRNN-----SNNNNNGTNMAAMREMIFRIAVMQPIHIDPEAV 127

Query: 136 KPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 195
           KPPKRRNV+IS DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK
Sbjct: 128 KPPKRRNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 187

Query: 196 SQVQSLERAAANRPISGAAAGVG 219
            QVQSLE  A    ++G   G G
Sbjct: 188 KQVQSLEEQAV---VTGGGGGGG 198

[Close]

BLAST of Lcy12g019730 vs. TAIR 10
Match: AT5G09750.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 140.2 bits (352), Expect = 2.2e-33
Identity = 86/180 (47.78%), Postives = 112/180 (62.22%), Query Frame = 0


Query: 41  SSSSNISTSDPHCLENLQQAAASSPPFMNLPLPPTVEQHSVLSGTAPFP-------TASR 100
           SS++N    D H   N            N P+   ++Q++ L    PF        ++S 
Sbjct: 22  SSNNNNKNDDHHHQHN------------NDPIGMAMDQYTQLHIFNPFSSSHFPPLSSSL 81

Query: 101 WRNSVVSGGETDSQKQ----RSVAAMREMIFRMAVMQPIHIDPESVKPPKRRNVKISTDP 160
              +++SG + D + +      + AM+EM++++A MQ + IDP +VK PKRRNV+IS DP
Sbjct: 82  TTTTLLSGDQEDDEDEEEPLEELGAMKEMMYKIAAMQSVDIDPATVKKPKRRNVRISDDP 141

Query: 161 QSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKSQVQSLERAAANRP 210
           QSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAI YVKFLK Q++ L       P
Sbjct: 142 QSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLNNNTGYTP 189

[Close]

BLAST of Lcy12g019730 vs. TAIR 10
Match: AT3G21330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 129.8 bits (325), Expect = 3.0e-30
Identity = 71/132 (53.79%), Postives = 97/132 (73.48%), Query Frame = 0


Query: 111 SVAAMREMIFRMAVMQPIHIDPESVKPPKRRNVKISTDPQSVAARHRRERISERIRILQR 170
           ++A M+EMI+R A  +P++   E V+ PKR+NVKISTDPQ+VAAR RRERISE+IR+LQ 
Sbjct: 241 AIAQMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQT 300

Query: 171 LVPGGTKMDTASMLDEAIHYVKFLKSQVQSLERAAA---NRPISGAAAGVGFPLEMSSGS 230
           LVPGGTKMDTASMLDEA +Y+KFL++QV++LE          +S ++A   FPL     S
Sbjct: 301 LVPGGTKMDTASMLDEAANYLKFLRAQVKALENLRPKLDQTNLSFSSAPTSFPL--FHPS 360

Query: 231 YVPMAKPSPMPH 240
           ++P+  P+ + H
Sbjct: 361 FLPLQNPNQIHH 370

[Close]

BLAST of Lcy12g019730 vs. TAIR 10
Match: AT4G00120.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 125.2 bits (313), Expect = 7.4e-29
Identity = 63/100 (63.00%), Postives = 78/100 (78.00%), Query Frame = 0


Query: 103 ETDSQKQRSVAAMREMIFRMAVMQPIHIDPESVKPPKRRNVKISTDPQSVAARHRRERIS 162
           + D +    + AM+EM + +AVMQP+ IDP +V  P RRNV+IS DPQ+V AR RRERIS
Sbjct: 76  DEDEEYDEDMDAMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRERIS 135

Query: 163 ERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKSQVQSLE 203
           E+IRIL+R+VPGG KMDTASMLDEAI Y KFLK QV+ L+
Sbjct: 136 EKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQ 175

The following BLAST results are available for this feature:

BLAST of Lcy12g019730 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SND4	1.0e-43	58.33	Transcription factor HEC2 OS=Arabidopsis thaliana OX=3702 GN=HEC2 PE=1 SV=1	[more]
Q9FHA7	5.7e-42	52.71	Transcription factor HEC1 OS=Arabidopsis thaliana OX=3702 GN=HEC1 PE=1 SV=1	[more]
Q9LXD8	3.1e-32	47.78	Transcription factor HEC3 OS=Arabidopsis thaliana OX=3702 GN=HEC3 PE=1 SV=1	[more]
Q8S3D2	4.3e-29	53.79	Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1	[more]
O81313	1.0e-27	63.00	Transcription factor IND OS=Arabidopsis thaliana OX=3702 GN=IND PE=1 SV=3	[more]

BLAST of Lcy12g019730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IKS0	2.8e-92	79.28	transcription factor HEC2-like OS=Cucurbita maxima OX=3661 GN=LOC111476512 PE=4 ...	[more]
A0A6J1FE54	1.1e-91	77.73	transcription factor HEC2-like OS=Cucurbita moschata OX=3662 GN=LOC111443152 PE=...	[more]
A0A1S3BU58	2.5e-72	70.40	transcription factor HEC2-like OS=Cucumis melo OX=3656 GN=LOC103493551 PE=4 SV=1	[more]
A0A0A0L0B3	2.1e-71	70.33	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G639900 PE=4 S...	[more]
A0A6J1ACP4	4.8e-68	62.41	transcription factor HEC2-like OS=Herrania umbratica OX=108875 GN=LOC110417094 P...	[more]

BLAST of Lcy12g019730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022975973.1	5.8e-92	79.28	transcription factor HEC2-like [Cucurbita maxima]	[more]
XP_023536625.1	7.6e-92	78.57	transcription factor HEC2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022936595.1	2.2e-91	77.73	transcription factor HEC2-like [Cucurbita moschata]	[more]
KAG7025068.1	2.9e-91	77.87	Transcription factor HEC2, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6591384.1	2.8e-86	77.37	Transcription factor HEC2, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Lcy12g019730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G50330.1	7.4e-45	58.33	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G67060.1	4.1e-43	52.71	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G09750.1	2.2e-33	47.78	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G21330.1	3.0e-30	53.79	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G00120.1	7.4e-29	63.00	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 151..200 e-value: 1.1E-13 score: 61.4
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 155..194 e-value: 1.6E-6 score: 28.0
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 145..194 score: 15.217952
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 148..210 e-value: 1.3E-12 score: 49.6
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 150..203
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..157
None	No IPR available	PANTHER	PTHR45914	TRANSCRIPTION FACTOR HEC3-RELATED	coord: 1..234
None	No IPR available	PANTHER	PTHR45914:SF29	BASIC HELIX-LOOP-HELIX (BHLH)-LIKE PROTEIN	coord: 1..234

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy12g019730.1	Lcy12g019730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity