Homology
BLAST of Lcy12g019710 vs. ExPASy Swiss-Prot
Match:
Q7X6A5 (Pentatricopeptide repeat-containing protein At1g55630 OS=Arabidopsis thaliana OX=3702 GN=At1g55630 PE=2 SV=1)
HSP 1 Score: 144.1 bits (362), Expect = 1.7e-33
Identity = 94/215 (43.72%), Postives = 120/215 (55.81%), Query Frame = 0
Query: 1 MKSSPPLSSRIVCRFSTSFIL-RRTIWNRRFG---SDDGFESVSVVEPFKKGLKKSELD- 60
M S S+ + R ++ F+ R N G +D+G E EP K + SE+D
Sbjct: 1 MNSVIHYSTSVAVRKASRFLFTSRKFCNGSIGGDVTDNGTE-----EPLKITWESSEMDC 60
Query: 61 -YFTDENSDSCEF-----------GSRRWDNL-SDGPGFDTLLASDELQLKVSGALVREV 120
+ +EN + SR D L D PGF+T A DEL + +SG LVREV
Sbjct: 61 EFDQEENGEKISVRKRFMESTKLSASRVLDTLQQDCPGFNTKSALDELNVSISGLLVREV 120
Query: 121 LRGILRYKCSKQNSVCKIGVQPYKFFVWSGKVENYRHEASSYHMIMKIFAECEKFKAIWR 180
L GILR + C YKFFVW G EN+RH A+ YH++MKIFAEC ++KA+ R
Sbjct: 121 LVGILRTLSFDNKTRC--AKLAYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCR 180
Query: 181 LVDEMTEKGYPVTARTFTLLTCTCGDAGLARKVVE 198
L+DEM + GYP TA TF LL CTCG+AGLAR VVE
Sbjct: 181 LIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVE 208
BLAST of Lcy12g019710 vs. ExPASy Swiss-Prot
Match:
Q9M1D8 (Pentatricopeptide repeat-containing protein At3g60050 OS=Arabidopsis thaliana OX=3702 GN=At3g60050 PE=2 SV=1)
HSP 1 Score: 136.3 bits (342), Expect = 3.6e-31
Identity = 65/120 (54.17%), Postives = 86/120 (71.67%), Query Frame = 0
Query: 77 DGPGFDTLLASDELQLKVSGALVREVLRGILRYKCSKQNSVCKIGVQPYKFFVWSGKVEN 136
D GF++ DEL ++VSG LVREVL GILR + C Y+FF+WSG+ E
Sbjct: 87 DESGFNSKSVLDELNVRVSGLLVREVLVGILRNLSYDNKARC--AKLAYRFFLWSGEQEC 146
Query: 137 YRHEASSYHMIMKIFAECEKFKAIWRLVDEMTEKGYPVTARTFTLLTCTCGDAGLARKVV 196
+RH +SYH++MKIFAEC ++KA+WRLVDEM + G+P TARTF LL C+CG+AGLA++ V
Sbjct: 147 FRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAV 204
BLAST of Lcy12g019710 vs. ExPASy Swiss-Prot
Match:
Q9C9A2 (Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g71060 PE=2 SV=1)
HSP 1 Score: 50.1 bits (118), Expect = 3.4e-05
Identity = 30/102 (29.41%), Postives = 54/102 (52.94%), Query Frame = 0
Query: 82 DTLLASDELQLKVSGALVREVLRGILRYKCSKQNSVCKIGVQPYKFFVWSGKVENYRHEA 141
+TLL +E +K+S AL+ EVL+ + GV F W+ + ++H
Sbjct: 82 ETLL--NEASVKLSPALIEEVLK-----------KLSNAGVLALSVFKWAENQKGFKHTT 141
Query: 142 SSYHMIMKIFAECEKFKAIWRLVDEMTEKGYPVTARTFTLLT 184
S+Y+ +++ + ++FK IW LVD+M K ++ TF L++
Sbjct: 142 SNYNALIESLGKIKQFKLIWSLVDDMKAKKL-LSKETFALIS 169
BLAST of Lcy12g019710 vs. ExPASy Swiss-Prot
Match:
Q9SSR6 (Pentatricopeptide repeat-containing protein At1g52640, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g52640 PE=2 SV=1)
HSP 1 Score: 46.6 bits (109), Expect = 3.8e-04
Identity = 22/91 (24.18%), Postives = 49/91 (53.85%), Query Frame = 0
Query: 93 KVSGALVREVLRGILRYKCSKQNSVCKIGVQPYKFFVWSGKVENYRHEASSYHMIMKIFA 152
+VS LV +VL+ +C +G ++FF+W+ ++ ++ H SYH++++I
Sbjct: 65 RVSSNLVEQVLK-----RCK------NLGFPAHRFFLWARRIPDFAHSLESYHILVEILG 124
Query: 153 ECEKFKAIWRLVDEMTEKGY-PVTARTFTLL 183
++F +W + E E Y ++++ F ++
Sbjct: 125 SSKQFALLWDFLIEAREYNYFEISSKVFWIV 144
BLAST of Lcy12g019710 vs. ExPASy TrEMBL
Match:
A0A6J1CI85 (pentatricopeptide repeat-containing protein At1g55630-like OS=Momordica charantia OX=3673 GN=LOC111011735 PE=4 SV=1)
HSP 1 Score: 275.4 bits (703), Expect = 1.8e-70
Identity = 148/220 (67.27%), Postives = 162/220 (73.64%), Query Frame = 0
Query: 1 MKSSPPLSSRIVCRFSTSFILRRTIWNRRFGSDDGFESVSVVEPFKKGLKKSELDYFTDE 60
M S LSSRIVCRFSTSFI+R T+WNR F SDDGFE VVEPFK+ K+SEL FTDE
Sbjct: 1 MNSISLLSSRIVCRFSTSFIVRLTVWNRSFSSDDGFE--CVVEPFKRVCKRSELGCFTDE 60
Query: 61 NSDSCEFGSRRWDNLS----------------------DGPGFDTLLASDELQLKVSGAL 120
NSDS EFG RRWD+ S DGPGFDT+LA DELQ+KVSG L
Sbjct: 61 NSDSSEFGGRRWDDFSVRRGFLEDARSDAEKVLEVLKQDGPGFDTILALDELQIKVSGFL 120
Query: 121 VREVLRGILRYKCSKQNSVC-KIGVQPYKFFVWSGKVENYRHEASSYHMIMKIFAECEKF 180
VREVL ILR + C K+G YKFFVWSGKVENYRH ASSYH+IMKIFA+CE+F
Sbjct: 121 VREVLMRILRSINFVDKTQCAKLG---YKFFVWSGKVENYRHTASSYHIIMKIFAQCEEF 180
Query: 181 KAIWRLVDEMTEKGYPVTARTFTLLTCTCGDAGLARKVVE 198
KA+WRLVDEMTEKGYPVTARTF +L CTCGDAGLARKVVE
Sbjct: 181 KAMWRLVDEMTEKGYPVTARTFIILICTCGDAGLARKVVE 215
BLAST of Lcy12g019710 vs. ExPASy TrEMBL
Match:
A0A6J1JDA6 (pentatricopeptide repeat-containing protein At1g55630-like OS=Cucurbita maxima OX=3661 GN=LOC111483452 PE=4 SV=1)
HSP 1 Score: 260.8 bits (665), Expect = 4.7e-66
Identity = 146/221 (66.06%), Postives = 159/221 (71.95%), Query Frame = 0
Query: 1 MKSSPPLSSRIVCR-FSTSFILRRTIWNRRFGSDDGFESVSVVEPFKKGLKKSELDYFTD 60
M S +SSRIVCR SFI+RR I NR FG DD FE VVEP KK L+ SE YFTD
Sbjct: 1 MNSLSLVSSRIVCRLLPPSFIVRRAICNRSFGGDDRFE--FVVEPNKKRLEGSEFGYFTD 60
Query: 61 ENSDSCEFGSRRWDNLS----------------------DGPGFDTLLASDELQLKVSGA 120
ENSDSCE GSRR D+LS DGPGFDTLLA DELQL+VSG
Sbjct: 61 ENSDSCEIGSRRGDDLSMRRGFPEGAKIDAEKVIEILKQDGPGFDTLLALDELQLQVSGV 120
Query: 121 LVREVLRGILRYKCSKQNSVC-KIGVQPYKFFVWSGKVENYRHEASSYHMIMKIFAECEK 180
LVREVL+GILR + C K+G YKFF+WSGKVENYRH ASSYHMIMKIFAECE+
Sbjct: 121 LVREVLKGILRSVNVLNKTQCAKLG---YKFFLWSGKVENYRHTASSYHMIMKIFAECEE 180
Query: 181 FKAIWRLVDEMTEKGYPVTARTFTLLTCTCGDAGLARKVVE 198
FKA+WRL+DEMTEKGYPVTARTF +L CTCGDAGLARKVVE
Sbjct: 181 FKAMWRLLDEMTEKGYPVTARTFMILICTCGDAGLARKVVE 216
BLAST of Lcy12g019710 vs. ExPASy TrEMBL
Match:
A0A6J1E6P6 (pentatricopeptide repeat-containing protein At1g55630-like OS=Cucurbita moschata OX=3662 GN=LOC111430470 PE=4 SV=1)
HSP 1 Score: 258.5 bits (659), Expect = 2.3e-65
Identity = 145/221 (65.61%), Postives = 158/221 (71.49%), Query Frame = 0
Query: 1 MKSSPPLSSRIVCR-FSTSFILRRTIWNRRFGSDDGFESVSVVEPFKKGLKKSELDYFTD 60
M S +SSRIVCR STSFI+RR I NR F DD FE VVEP KK L+ SE YFTD
Sbjct: 1 MNSLSLVSSRIVCRLLSTSFIVRRAICNRSFSGDDRFE--FVVEPNKKRLEGSEFGYFTD 60
Query: 61 ENSDSCEFGSRRWDNLS----------------------DGPGFDTLLASDELQLKVSGA 120
EN DSCE GSRR D+LS DGPGFDTLLA DELQL+VSG
Sbjct: 61 ENLDSCEIGSRREDDLSMRKVFLENAKTDAEKVIEILKQDGPGFDTLLALDELQLQVSGV 120
Query: 121 LVREVLRGILRYKCSKQNSVC-KIGVQPYKFFVWSGKVENYRHEASSYHMIMKIFAECEK 180
LVREVL+GILR + C K+G YKFFVWS KVENYRH ASSYHM+MKIFAECE+
Sbjct: 121 LVREVLKGILRSVNVLNKTQCAKLG---YKFFVWSSKVENYRHTASSYHMVMKIFAECEE 180
Query: 181 FKAIWRLVDEMTEKGYPVTARTFTLLTCTCGDAGLARKVVE 198
FKA+WRL+DEMTEKGYPVTARTF +L CTCGDAGLARKVVE
Sbjct: 181 FKAMWRLLDEMTEKGYPVTARTFMILICTCGDAGLARKVVE 216
BLAST of Lcy12g019710 vs. ExPASy TrEMBL
Match:
A0A6J1FZ63 (pentatricopeptide repeat-containing protein At1g55630-like OS=Cucurbita moschata OX=3662 GN=LOC111449239 PE=4 SV=1)
HSP 1 Score: 250.0 bits (637), Expect = 8.3e-63
Identity = 140/215 (65.12%), Postives = 154/215 (71.63%), Query Frame = 0
Query: 7 LSSRIVCRF-STSFILRRTIWNRRFGSDDGFESVSVVEPFKKGLKKSELDYFTDENSDSC 66
LS+RIVCR S+SFI+RRTIWNR FGSDD FE V+EP+KKGL++SE SC
Sbjct: 7 LSARIVCRLVSSSFIVRRTIWNRSFGSDDRFE--FVMEPYKKGLERSE----------SC 66
Query: 67 EFGSRRWDNLS----------------------DGPGFDTLLASDELQLKVSGALVREVL 126
EF S R D+LS DGPGFDTL+A DELQLKVSG LVREVL
Sbjct: 67 EFESLRCDDLSVRRGFLEDSKTDAGKVLEVLKQDGPGFDTLVALDELQLKVSGVLVREVL 126
Query: 127 RGILR-YKCSKQNSVCKIGVQPYKFFVWSGKVENYRHEASSYHMIMKIFAECEKFKAIWR 186
RGILR + K+G YKFFVWSGKVEN+ H A SYHMIMKIFAECE+FKA+WR
Sbjct: 127 RGILRSINVLNKTQCAKLG---YKFFVWSGKVENFNHTAGSYHMIMKIFAECEEFKAMWR 186
Query: 187 LVDEMTEKGYPVTARTFTLLTCTCGDAGLARKVVE 198
LVDEMTEKGYPVTARTFTLL CTCGDAGLARKVVE
Sbjct: 187 LVDEMTEKGYPVTARTFTLLICTCGDAGLARKVVE 206
BLAST of Lcy12g019710 vs. ExPASy TrEMBL
Match:
A0A6J1HY31 (pentatricopeptide repeat-containing protein At1g55630-like OS=Cucurbita maxima OX=3661 GN=LOC111467699 PE=4 SV=1)
HSP 1 Score: 247.3 bits (630), Expect = 5.4e-62
Identity = 140/215 (65.12%), Postives = 155/215 (72.09%), Query Frame = 0
Query: 7 LSSRIVCRF-STSFILRRTIWNRRFGSDDGFESVSVVEPFKKGLKKSELDYFTDENSDSC 66
LS+RIV R S SFI+RRTIWNR FGSDD FE V+EP+KKGL++SE SC
Sbjct: 7 LSTRIVWRLVSNSFIVRRTIWNRSFGSDDRFE--FVMEPYKKGLERSE----------SC 66
Query: 67 EFGSRRWDNLS----------------------DGPGFDTLLASDELQLKVSGALVREVL 126
EF S R+D+LS DGPGFDTL+A DELQLKVSG LVREVL
Sbjct: 67 EFESLRYDDLSVRRGFLEDSKTDAGKVLEVLKQDGPGFDTLVALDELQLKVSGVLVREVL 126
Query: 127 RGILRYKCSKQNSVC-KIGVQPYKFFVWSGKVENYRHEASSYHMIMKIFAECEKFKAIWR 186
RGILR + C K+G YKFFVWSGKVEN+ H ASSYH+IMKIFAECE+FKA+WR
Sbjct: 127 RGILRSINVLDKTQCAKLG---YKFFVWSGKVENFNHTASSYHLIMKIFAECEEFKAMWR 186
Query: 187 LVDEMTEKGYPVTARTFTLLTCTCGDAGLARKVVE 198
LVDEMTEKGYPVTARTFTLL CTCGDAGLARKVVE
Sbjct: 187 LVDEMTEKGYPVTARTFTLLICTCGDAGLARKVVE 206
BLAST of Lcy12g019710 vs. NCBI nr
Match:
XP_022141309.1 (pentatricopeptide repeat-containing protein At1g55630-like [Momordica charantia])
HSP 1 Score: 275.4 bits (703), Expect = 3.8e-70
Identity = 148/220 (67.27%), Postives = 162/220 (73.64%), Query Frame = 0
Query: 1 MKSSPPLSSRIVCRFSTSFILRRTIWNRRFGSDDGFESVSVVEPFKKGLKKSELDYFTDE 60
M S LSSRIVCRFSTSFI+R T+WNR F SDDGFE VVEPFK+ K+SEL FTDE
Sbjct: 1 MNSISLLSSRIVCRFSTSFIVRLTVWNRSFSSDDGFE--CVVEPFKRVCKRSELGCFTDE 60
Query: 61 NSDSCEFGSRRWDNLS----------------------DGPGFDTLLASDELQLKVSGAL 120
NSDS EFG RRWD+ S DGPGFDT+LA DELQ+KVSG L
Sbjct: 61 NSDSSEFGGRRWDDFSVRRGFLEDARSDAEKVLEVLKQDGPGFDTILALDELQIKVSGFL 120
Query: 121 VREVLRGILRYKCSKQNSVC-KIGVQPYKFFVWSGKVENYRHEASSYHMIMKIFAECEKF 180
VREVL ILR + C K+G YKFFVWSGKVENYRH ASSYH+IMKIFA+CE+F
Sbjct: 121 VREVLMRILRSINFVDKTQCAKLG---YKFFVWSGKVENYRHTASSYHIIMKIFAQCEEF 180
Query: 181 KAIWRLVDEMTEKGYPVTARTFTLLTCTCGDAGLARKVVE 198
KA+WRLVDEMTEKGYPVTARTF +L CTCGDAGLARKVVE
Sbjct: 181 KAMWRLVDEMTEKGYPVTARTFIILICTCGDAGLARKVVE 215
BLAST of Lcy12g019710 vs. NCBI nr
Match:
XP_023552269.1 (pentatricopeptide repeat-containing protein At1g55630-like isoform X4 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 268.9 bits (686), Expect = 3.6e-68
Identity = 148/220 (67.27%), Postives = 160/220 (72.73%), Query Frame = 0
Query: 1 MKSSPPLSSRIVCR-FSTSFILRRTIWNRRFGSDDGFESVSVVEPFKKGLKKSELDYFTD 60
M S +SSRIVCR FSTSFI+RRTI NR FG DD FE VVEP KK L+ SE YFTD
Sbjct: 1 MNSLSLVSSRIVCRLFSTSFIVRRTICNRSFGGDDRFE--FVVEPNKKRLEGSEFGYFTD 60
Query: 61 ENSDSCEFGSRRWDNLS----------------------DGPGFDTLLASDELQLKVSGA 120
ENSDSCE GSRR D+LS DGPGFDTLLA DELQL+VSG
Sbjct: 61 ENSDSCEIGSRRGDDLSMRRGFLEGAKIGAEKVIEILKQDGPGFDTLLALDELQLQVSGV 120
Query: 121 LVREVLRGILRYKCSKQNSVCKIGVQPYKFFVWSGKVENYRHEASSYHMIMKIFAECEKF 180
LVREVL+GILR + C YKFFVWSGKVENYRH ASSYHM+MKIFAECE+F
Sbjct: 121 LVREVLKGILRSVNVLNKTQC--AKSGYKFFVWSGKVENYRHTASSYHMVMKIFAECEEF 180
Query: 181 KAIWRLVDEMTEKGYPVTARTFTLLTCTCGDAGLARKVVE 198
KA+WRL+DEMTEKGYPVTARTF +L CTCGDAGLARKVVE
Sbjct: 181 KAMWRLLDEMTEKGYPVTARTFMILICTCGDAGLARKVVE 216
BLAST of Lcy12g019710 vs. NCBI nr
Match:
XP_023552266.1 (pentatricopeptide repeat-containing protein At1g55630-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023552267.1 pentatricopeptide repeat-containing protein At1g55630-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023552268.1 pentatricopeptide repeat-containing protein At1g55630-like isoform X3 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 267.3 bits (682), Expect = 1.0e-67
Identity = 148/221 (66.97%), Postives = 161/221 (72.85%), Query Frame = 0
Query: 1 MKSSPPLSSRIVCR-FSTSFILRRTIWNRRFGSDDGFESVSVVEPFKKGLKKSELDYFTD 60
M S +SSRIVCR FSTSFI+RRTI NR FG DD FE VVEP KK L+ SE YFTD
Sbjct: 1 MNSLSLVSSRIVCRLFSTSFIVRRTICNRSFGGDDRFE--FVVEPNKKRLEGSEFGYFTD 60
Query: 61 ENSDSCEFGSRRWDNLS----------------------DGPGFDTLLASDELQLKVSGA 120
ENSDSCE GSRR D+LS DGPGFDTLLA DELQL+VSG
Sbjct: 61 ENSDSCEIGSRRGDDLSMRRGFLEGAKIGAEKVIEILKQDGPGFDTLLALDELQLQVSGV 120
Query: 121 LVREVLRGILR-YKCSKQNSVCKIGVQPYKFFVWSGKVENYRHEASSYHMIMKIFAECEK 180
LVREVL+GILR + K+G YKFFVWS KVENYRH ASSYHM+MKIFAECE+
Sbjct: 121 LVREVLKGILRSINVLNKTQCAKLG---YKFFVWSSKVENYRHTASSYHMVMKIFAECEE 180
Query: 181 FKAIWRLVDEMTEKGYPVTARTFTLLTCTCGDAGLARKVVE 198
FKA+WRL+DEMTEKGYPVTARTF +L CTCGDAGLARKVVE
Sbjct: 181 FKAMWRLLDEMTEKGYPVTARTFMILICTCGDAGLARKVVE 216
BLAST of Lcy12g019710 vs. NCBI nr
Match:
XP_022985444.1 (pentatricopeptide repeat-containing protein At1g55630-like [Cucurbita maxima])
HSP 1 Score: 260.8 bits (665), Expect = 9.7e-66
Identity = 146/221 (66.06%), Postives = 159/221 (71.95%), Query Frame = 0
Query: 1 MKSSPPLSSRIVCR-FSTSFILRRTIWNRRFGSDDGFESVSVVEPFKKGLKKSELDYFTD 60
M S +SSRIVCR SFI+RR I NR FG DD FE VVEP KK L+ SE YFTD
Sbjct: 1 MNSLSLVSSRIVCRLLPPSFIVRRAICNRSFGGDDRFE--FVVEPNKKRLEGSEFGYFTD 60
Query: 61 ENSDSCEFGSRRWDNLS----------------------DGPGFDTLLASDELQLKVSGA 120
ENSDSCE GSRR D+LS DGPGFDTLLA DELQL+VSG
Sbjct: 61 ENSDSCEIGSRRGDDLSMRRGFPEGAKIDAEKVIEILKQDGPGFDTLLALDELQLQVSGV 120
Query: 121 LVREVLRGILRYKCSKQNSVC-KIGVQPYKFFVWSGKVENYRHEASSYHMIMKIFAECEK 180
LVREVL+GILR + C K+G YKFF+WSGKVENYRH ASSYHMIMKIFAECE+
Sbjct: 121 LVREVLKGILRSVNVLNKTQCAKLG---YKFFLWSGKVENYRHTASSYHMIMKIFAECEE 180
Query: 181 FKAIWRLVDEMTEKGYPVTARTFTLLTCTCGDAGLARKVVE 198
FKA+WRL+DEMTEKGYPVTARTF +L CTCGDAGLARKVVE
Sbjct: 181 FKAMWRLLDEMTEKGYPVTARTFMILICTCGDAGLARKVVE 216
BLAST of Lcy12g019710 vs. NCBI nr
Match:
XP_022922468.1 (pentatricopeptide repeat-containing protein At1g55630-like [Cucurbita moschata])
HSP 1 Score: 258.5 bits (659), Expect = 4.8e-65
Identity = 145/221 (65.61%), Postives = 158/221 (71.49%), Query Frame = 0
Query: 1 MKSSPPLSSRIVCR-FSTSFILRRTIWNRRFGSDDGFESVSVVEPFKKGLKKSELDYFTD 60
M S +SSRIVCR STSFI+RR I NR F DD FE VVEP KK L+ SE YFTD
Sbjct: 1 MNSLSLVSSRIVCRLLSTSFIVRRAICNRSFSGDDRFE--FVVEPNKKRLEGSEFGYFTD 60
Query: 61 ENSDSCEFGSRRWDNLS----------------------DGPGFDTLLASDELQLKVSGA 120
EN DSCE GSRR D+LS DGPGFDTLLA DELQL+VSG
Sbjct: 61 ENLDSCEIGSRREDDLSMRKVFLENAKTDAEKVIEILKQDGPGFDTLLALDELQLQVSGV 120
Query: 121 LVREVLRGILRYKCSKQNSVC-KIGVQPYKFFVWSGKVENYRHEASSYHMIMKIFAECEK 180
LVREVL+GILR + C K+G YKFFVWS KVENYRH ASSYHM+MKIFAECE+
Sbjct: 121 LVREVLKGILRSVNVLNKTQCAKLG---YKFFVWSSKVENYRHTASSYHMVMKIFAECEE 180
Query: 181 FKAIWRLVDEMTEKGYPVTARTFTLLTCTCGDAGLARKVVE 198
FKA+WRL+DEMTEKGYPVTARTF +L CTCGDAGLARKVVE
Sbjct: 181 FKAMWRLLDEMTEKGYPVTARTFMILICTCGDAGLARKVVE 216
BLAST of Lcy12g019710 vs. TAIR 10
Match:
AT1G55630.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 144.1 bits (362), Expect = 1.2e-34
Identity = 94/215 (43.72%), Postives = 120/215 (55.81%), Query Frame = 0
Query: 1 MKSSPPLSSRIVCRFSTSFIL-RRTIWNRRFG---SDDGFESVSVVEPFKKGLKKSELD- 60
M S S+ + R ++ F+ R N G +D+G E EP K + SE+D
Sbjct: 1 MNSVIHYSTSVAVRKASRFLFTSRKFCNGSIGGDVTDNGTE-----EPLKITWESSEMDC 60
Query: 61 -YFTDENSDSCEF-----------GSRRWDNL-SDGPGFDTLLASDELQLKVSGALVREV 120
+ +EN + SR D L D PGF+T A DEL + +SG LVREV
Sbjct: 61 EFDQEENGEKISVRKRFMESTKLSASRVLDTLQQDCPGFNTKSALDELNVSISGLLVREV 120
Query: 121 LRGILRYKCSKQNSVCKIGVQPYKFFVWSGKVENYRHEASSYHMIMKIFAECEKFKAIWR 180
L GILR + C YKFFVW G EN+RH A+ YH++MKIFAEC ++KA+ R
Sbjct: 121 LVGILRTLSFDNKTRC--AKLAYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCR 180
Query: 181 LVDEMTEKGYPVTARTFTLLTCTCGDAGLARKVVE 198
L+DEM + GYP TA TF LL CTCG+AGLAR VVE
Sbjct: 181 LIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVE 208
BLAST of Lcy12g019710 vs. TAIR 10
Match:
AT3G60050.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 136.3 bits (342), Expect = 2.6e-32
Identity = 65/120 (54.17%), Postives = 86/120 (71.67%), Query Frame = 0
Query: 77 DGPGFDTLLASDELQLKVSGALVREVLRGILRYKCSKQNSVCKIGVQPYKFFVWSGKVEN 136
D GF++ DEL ++VSG LVREVL GILR + C Y+FF+WSG+ E
Sbjct: 87 DESGFNSKSVLDELNVRVSGLLVREVLVGILRNLSYDNKARC--AKLAYRFFLWSGEQEC 146
Query: 137 YRHEASSYHMIMKIFAECEKFKAIWRLVDEMTEKGYPVTARTFTLLTCTCGDAGLARKVV 196
+RH +SYH++MKIFAEC ++KA+WRLVDEM + G+P TARTF LL C+CG+AGLA++ V
Sbjct: 147 FRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAV 204
BLAST of Lcy12g019710 vs. TAIR 10
Match:
AT1G71060.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 50.1 bits (118), Expect = 2.4e-06
Identity = 30/102 (29.41%), Postives = 54/102 (52.94%), Query Frame = 0
Query: 82 DTLLASDELQLKVSGALVREVLRGILRYKCSKQNSVCKIGVQPYKFFVWSGKVENYRHEA 141
+TLL +E +K+S AL+ EVL+ + GV F W+ + ++H
Sbjct: 82 ETLL--NEASVKLSPALIEEVLK-----------KLSNAGVLALSVFKWAENQKGFKHTT 141
Query: 142 SSYHMIMKIFAECEKFKAIWRLVDEMTEKGYPVTARTFTLLT 184
S+Y+ +++ + ++FK IW LVD+M K ++ TF L++
Sbjct: 142 SNYNALIESLGKIKQFKLIWSLVDDMKAKKL-LSKETFALIS 169
BLAST of Lcy12g019710 vs. TAIR 10
Match:
AT1G52640.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 46.6 bits (109), Expect = 2.7e-05
Identity = 22/91 (24.18%), Postives = 49/91 (53.85%), Query Frame = 0
Query: 93 KVSGALVREVLRGILRYKCSKQNSVCKIGVQPYKFFVWSGKVENYRHEASSYHMIMKIFA 152
+VS LV +VL+ +C +G ++FF+W+ ++ ++ H SYH++++I
Sbjct: 65 RVSSNLVEQVLK-----RCK------NLGFPAHRFFLWARRIPDFAHSLESYHILVEILG 124
Query: 153 ECEKFKAIWRLVDEMTEKGY-PVTARTFTLL 183
++F +W + E E Y ++++ F ++
Sbjct: 125 SSKQFALLWDFLIEAREYNYFEISSKVFWIV 144
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q7X6A5 | 1.7e-33 | 43.72 | Pentatricopeptide repeat-containing protein At1g55630 OS=Arabidopsis thaliana OX... | [more] |
Q9M1D8 | 3.6e-31 | 54.17 | Pentatricopeptide repeat-containing protein At3g60050 OS=Arabidopsis thaliana OX... | [more] |
Q9C9A2 | 3.4e-05 | 29.41 | Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidop... | [more] |
Q9SSR6 | 3.8e-04 | 24.18 | Pentatricopeptide repeat-containing protein At1g52640, mitochondrial OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1CI85 | 1.8e-70 | 67.27 | pentatricopeptide repeat-containing protein At1g55630-like OS=Momordica charanti... | [more] |
A0A6J1JDA6 | 4.7e-66 | 66.06 | pentatricopeptide repeat-containing protein At1g55630-like OS=Cucurbita maxima O... | [more] |
A0A6J1E6P6 | 2.3e-65 | 65.61 | pentatricopeptide repeat-containing protein At1g55630-like OS=Cucurbita moschata... | [more] |
A0A6J1FZ63 | 8.3e-63 | 65.12 | pentatricopeptide repeat-containing protein At1g55630-like OS=Cucurbita moschata... | [more] |
A0A6J1HY31 | 5.4e-62 | 65.12 | pentatricopeptide repeat-containing protein At1g55630-like OS=Cucurbita maxima O... | [more] |
Match Name | E-value | Identity | Description | |
XP_022141309.1 | 3.8e-70 | 67.27 | pentatricopeptide repeat-containing protein At1g55630-like [Momordica charantia] | [more] |
XP_023552269.1 | 3.6e-68 | 67.27 | pentatricopeptide repeat-containing protein At1g55630-like isoform X4 [Cucurbita... | [more] |
XP_023552266.1 | 1.0e-67 | 66.97 | pentatricopeptide repeat-containing protein At1g55630-like isoform X1 [Cucurbita... | [more] |
XP_022985444.1 | 9.7e-66 | 66.06 | pentatricopeptide repeat-containing protein At1g55630-like [Cucurbita maxima] | [more] |
XP_022922468.1 | 4.8e-65 | 65.61 | pentatricopeptide repeat-containing protein At1g55630-like [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
AT1G55630.1 | 1.2e-34 | 43.72 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G60050.1 | 2.6e-32 | 54.17 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G71060.1 | 2.4e-06 | 29.41 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G52640.1 | 2.7e-05 | 24.18 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |