
Lcy12g016960 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTTCCTCACTGAGCTCATAAATGGCGCTTTATGACCTAAACCTGCAAATTTCCTCTCCACTTTTTCCATTCCCACAAAAGCTCACAAGTGTAATTTAATGGAACTTCTTTTTGTATACCAGACAAATTCGAAGTTCTTAGGGTTCGAATTCGATCCGCCATTAATGAAAACTTGCAGAATTTGAGAGAGAGAGAGAGAGAGAGTTGCAATTGCAATGGCGACTCTCATTAAATTTTGGTTGTTAAGAAGCTGCGTCTGTGGATTTCATTTTTCATGGTTGAGCAGGTGAAAGATTTTAATGGCCAACCCCATTAAAAAAGCACTCTTCTGAGAGAAGAAGTCTTTCCAATTCCCACCGACACCTCTATATAAATGGCTGAAATTATTACTCTCTGTACGTTTTTCCAACTCTCTCACCTGTTTTTTCTTTTTGTGGGTTTTCATTTCTCTTTGTCACTATCTCTCTCTCTTGTTTGAAGGATCTGAAACTCTGTGGGTTTCTCTCTCTAGAGTTATGGTTTATTCGAGGAAGTTCAGAGGAGTCAGGCAGCGGCAGTGGGGCTCGTGGGTGTCAGAAATCCGCCACCCATTGCTGTAAAATTCCCTGTTTCATTACGTTTGTTTGTGCTTCTGCCATAAATATATGCGCCATTGGTTTAAAAATGCTCTGTATCCCCATTTTCTGTCTGGTGCACACAACCTGTTTGTTGATTTGTCTGAAAGAAACTTGACGGCCATGGCGGCGTGGATTTGTGAACTACATTATTTGTTGTGAATATGTGCGCTATTGCTTGTGCTCGTTGGTTCAGAGATGGGCTGAAACTCCATTTTTGGTCTGGTGCCCATAACCTGTTTGTTGATTTGCCTGAAAGAAGCTGGGTAGCCATGGCGTTTGGCTTGCATATTTTTGCAGATTTGTGAACTGCATTATTGTTACAAACGTTGTGTGTTCTTGCTTGTGTTTGTTGGTTTAAAAAAGCTCTGAAAAGTGAAAGCTCTCATCTTCTTTCTGATGCCTTCAAAGTGCTTGTTGATTTGCTCCAAAGAAGCTGGCTGGCCATGGCTGCGCTCATGCTTGAAGATTTGAAACTGCATTACACCTTGAGCGCACACATTCTTATGTTTTTCATGTGTTTTTTTCTTTGTAGGAAGAGAAGGGTGTGGCTGGGGACATTCGACACAGCAGAGGATGCAGCACGAGCGTATGACCAAGCAGCCATCTTGATGAACGGCCAAAACGCCAAGACCAATTTCCCTGCATCAAAAGACCAATCTGAAGAAGCCAGCCAAGGCCATGGATCTTCTCCATTGTCCCCAAAAGCACTTTCAGAGCTACTCAGCACCAAGCTCAGAAAGTGCTGCAAGAACCCCTCTCCCTCCTTGACATGCCTGCGGCTCGACAGCGACAACGCCCACATCGGCGTCTGGCAGAAGCGCGCAGGCACTCGAGCAGCCTCCAATTGGGTCATGAGGATTGAGCTAGGGAAGAAGGAGACACTGTCGCCGTCGCCATTGCCATCGCCCGAATTGGCGAGCCAGGAAGCCGATAGCCATCGGAATGGAATTGATGAAGAAGACAGAATTGCAATGCAAATGATTGAAGAGTTGCTCAATTGGAACTGCCCTCTTCCTTCAACTTCAAGCTAA CTTCCTCACTGAGCTCATAAATGGCGCTTTATGACCTAAACCTGCAAATTTCCTCTCCACTTTTTCCATTCCCACAAAAGCTCACAAGTGTAATTTAATGGAACTTCTTTTTGTATACCAGACAAATTCGAAGTTCTTAGGGTTCGAATTCGATCCGCCATTAATGAAAACTTGCAGAATTTGAGAGAGAGAGAGAGAGAGAGTTGCAATTGCAATGGCGACTCTCATTAAATTTTGGTTGTTAAGAAGCTGCGTCTGTGGATTTCATTTTTCATGGTTGAGCAGGTGAAAGATTTTAATGGCCAACCCCATTAAAAAAGCACTCTTCTGAGAGAAGAAGTCTTTCCAATTCCCACCGACACCTCTATATAAATGGCTGAAATTATTACTCTCTGATCTGAAACTCTGTGGGTTTCTCTCTCTAGAGTTATGGTTTATTCGAGGAAGTTCAGAGGAGTCAGGCAGCGGCAGTGGGGCTCGTGGGTGTCAGAAATCCGCCACCCATTGCTGAAGAGAAGGGTGTGGCTGGGGACATTCGACACAGCAGAGGATGCAGCACGAGCGTATGACCAAGCAGCCATCTTGATGAACGGCCAAAACGCCAAGACCAATTTCCCTGCATCAAAAGACCAATCTGAAGAAGCCAGCCAAGGCCATGGATCTTCTCCATTGTCCCCAAAAGCACTTTCAGAGCTACTCAGCACCAAGCTCAGAAAGTGCTGCAAGAACCCCTCTCCCTCCTTGACATGCCTGCGGCTCGACAGCGACAACGCCCACATCGGCGTCTGGCAGAAGCGCGCAGGCACTCGAGCAGCCTCCAATTGGGTCATGAGGATTGAGCTAGGGAAGAAGGAGACACTGTCGCCGTCGCCATTGCCATCGCCCGAATTGGCGAGCCAGGAAGCCGATAGCCATCGGAATGGAATTGATGAAGAAGACAGAATTGCAATGCAAATGATTGAAGAGTTGCTCAATTGGAACTGCCCTCTTCCTTCAACTTCAAGCTAA ATGGTTTATTCGAGGAAGTTCAGAGGAGTCAGGCAGCGGCAGTGGGGCTCGTGGGTGTCAGAAATCCGCCACCCATTGCTGAAGAGAAGGGTGTGGCTGGGGACATTCGACACAGCAGAGGATGCAGCACGAGCGTATGACCAAGCAGCCATCTTGATGAACGGCCAAAACGCCAAGACCAATTTCCCTGCATCAAAAGACCAATCTGAAGAAGCCAGCCAAGGCCATGGATCTTCTCCATTGTCCCCAAAAGCACTTTCAGAGCTACTCAGCACCAAGCTCAGAAAGTGCTGCAAGAACCCCTCTCCCTCCTTGACATGCCTGCGGCTCGACAGCGACAACGCCCACATCGGCGTCTGGCAGAAGCGCGCAGGCACTCGAGCAGCCTCCAATTGGGTCATGAGGATTGAGCTAGGGAAGAAGGAGACACTGTCGCCGTCGCCATTGCCATCGCCCGAATTGGCGAGCCAGGAAGCCGATAGCCATCGGAATGGAATTGATGAAGAAGACAGAATTGCAATGCAAATGATTGAAGAGTTGCTCAATTGGAACTGCCCTCTTCCTTCAACTTCAAGCTAA MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSEEASQGHGSSPLSPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETLSPSPLPSPELASQEADSHRNGIDEEDRIAMQMIEELLNWNCPLPSTSS Homology
BLAST of Lcy12g016960 vs. ExPASy Swiss-Prot
Match: Q3E958 (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702 GN=SHN3 PE=2 SV=1) HSP 1 Score: 233.8 bits (595), Expect = 1.6e-60 Identity = 116/186 (62.37%), Postives = 143/186 (76.88%), Query Frame = 0
BLAST of Lcy12g016960 vs. ExPASy Swiss-Prot
Match: Q9LFN7 (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702 GN=SHN2 PE=2 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 6.2e-60 Identity = 121/189 (64.02%), Postives = 144/189 (76.19%), Query Frame = 0
BLAST of Lcy12g016960 vs. ExPASy Swiss-Prot
Match: Q9XI33 (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN=WIN1 PE=2 SV=1) HSP 1 Score: 223.4 bits (568), Expect = 2.2e-57 Identity = 114/199 (57.29%), Postives = 149/199 (74.87%), Query Frame = 0
BLAST of Lcy12g016960 vs. ExPASy Swiss-Prot
Match: Q94AW5 (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 GN=ERF003 PE=1 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 7.9e-23 Identity = 56/93 (60.22%), Postives = 66/93 (70.97%), Query Frame = 0
BLAST of Lcy12g016960 vs. ExPASy Swiss-Prot
Match: P16146 (Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 4.8e-20 Identity = 50/93 (53.76%), Postives = 64/93 (68.82%), Query Frame = 0
BLAST of Lcy12g016960 vs. ExPASy TrEMBL
Match: A0A6J1FE03 (ethylene-responsive transcription factor SHINE 2 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111443124 PE=4 SV=1) HSP 1 Score: 362.5 bits (929), Expect = 1.1e-96 Identity = 179/192 (93.23%), Postives = 181/192 (94.27%), Query Frame = 0
BLAST of Lcy12g016960 vs. ExPASy TrEMBL
Match: A0A6J1F8L5 (ethylene-responsive transcription factor SHINE 2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443124 PE=4 SV=1) HSP 1 Score: 362.5 bits (929), Expect = 1.1e-96 Identity = 179/192 (93.23%), Postives = 181/192 (94.27%), Query Frame = 0
BLAST of Lcy12g016960 vs. ExPASy TrEMBL
Match: A0A6J1IIU8 (ethylene-responsive transcription factor SHINE 2 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111476664 PE=4 SV=1) HSP 1 Score: 359.4 bits (921), Expect = 9.5e-96 Identity = 180/194 (92.78%), Postives = 182/194 (93.81%), Query Frame = 0
BLAST of Lcy12g016960 vs. ExPASy TrEMBL
Match: A0A6J1IGA2 (ethylene-responsive transcription factor SHINE 2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111476664 PE=4 SV=1) HSP 1 Score: 359.4 bits (921), Expect = 9.5e-96 Identity = 180/194 (92.78%), Postives = 182/194 (93.81%), Query Frame = 0
BLAST of Lcy12g016960 vs. ExPASy TrEMBL
Match: A0A6J1BYX9 (ethylene-responsive transcription factor SHINE 2-like OS=Momordica charantia OX=3673 GN=LOC111006480 PE=4 SV=1) HSP 1 Score: 356.7 bits (914), Expect = 6.1e-95 Identity = 179/194 (92.27%), Postives = 182/194 (93.81%), Query Frame = 0
BLAST of Lcy12g016960 vs. NCBI nr
Match: XP_022936545.1 (ethylene-responsive transcription factor SHINE 2 isoform X2 [Cucurbita moschata] >XP_022936547.1 ethylene-responsive transcription factor SHINE 2 isoform X2 [Cucurbita moschata] >XP_022936548.1 ethylene-responsive transcription factor SHINE 2 isoform X2 [Cucurbita moschata] >XP_022936549.1 ethylene-responsive transcription factor SHINE 2 isoform X2 [Cucurbita moschata]) HSP 1 Score: 362.5 bits (929), Expect = 2.3e-96 Identity = 179/192 (93.23%), Postives = 181/192 (94.27%), Query Frame = 0
BLAST of Lcy12g016960 vs. NCBI nr
Match: XP_022936544.1 (ethylene-responsive transcription factor SHINE 2 isoform X1 [Cucurbita moschata]) HSP 1 Score: 362.5 bits (929), Expect = 2.3e-96 Identity = 179/192 (93.23%), Postives = 181/192 (94.27%), Query Frame = 0
BLAST of Lcy12g016960 vs. NCBI nr
Match: KAG6591574.1 (Ethylene-responsive transcription factor SHINE 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 361.3 bits (926), Expect = 5.2e-96 Identity = 178/192 (92.71%), Postives = 181/192 (94.27%), Query Frame = 0
BLAST of Lcy12g016960 vs. NCBI nr
Match: XP_022976202.1 (ethylene-responsive transcription factor SHINE 2 isoform X2 [Cucurbita maxima] >XP_022976203.1 ethylene-responsive transcription factor SHINE 2 isoform X2 [Cucurbita maxima] >XP_022976204.1 ethylene-responsive transcription factor SHINE 2 isoform X2 [Cucurbita maxima] >XP_022976205.1 ethylene-responsive transcription factor SHINE 2 isoform X2 [Cucurbita maxima]) HSP 1 Score: 359.4 bits (921), Expect = 2.0e-95 Identity = 180/194 (92.78%), Postives = 182/194 (93.81%), Query Frame = 0
BLAST of Lcy12g016960 vs. NCBI nr
Match: XP_022976201.1 (ethylene-responsive transcription factor SHINE 2 isoform X1 [Cucurbita maxima]) HSP 1 Score: 359.4 bits (921), Expect = 2.0e-95 Identity = 180/194 (92.78%), Postives = 182/194 (93.81%), Query Frame = 0
BLAST of Lcy12g016960 vs. TAIR 10
Match: AT5G25390.2 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 233.8 bits (595), Expect = 1.2e-61 Identity = 116/186 (62.37%), Postives = 143/186 (76.88%), Query Frame = 0
BLAST of Lcy12g016960 vs. TAIR 10
Match: AT5G11190.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 231.9 bits (590), Expect = 4.4e-61 Identity = 121/189 (64.02%), Postives = 144/189 (76.19%), Query Frame = 0
BLAST of Lcy12g016960 vs. TAIR 10
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 223.4 bits (568), Expect = 1.6e-58 Identity = 114/199 (57.29%), Postives = 149/199 (74.87%), Query Frame = 0
BLAST of Lcy12g016960 vs. TAIR 10
Match: AT5G25390.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 222.6 bits (566), Expect = 2.7e-58 Identity = 113/186 (60.75%), Postives = 140/186 (75.27%), Query Frame = 0
BLAST of Lcy12g016960 vs. TAIR 10
Match: AT5G25190.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 108.6 bits (270), Expect = 5.6e-24 Identity = 56/93 (60.22%), Postives = 66/93 (70.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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