Lcy12g016940 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy12g016940
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Coatomer subunit zeta
Location	Chr12: 44661482 .. 44664154 (-)
RNA-Seq Expression	Lcy12g016940
Synteny	Lcy12g016940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAGCTGCGAGAGAGAATCTGGGATTGTAAGATTTATTTCGAGGCTTCGAATTTTCGCGGTGGCAACCAGATTTCTTCCTTCAGAAACTCCGATCGAACAGTTTAGACGGCGAAAGATCAGGCATGTTGCTTGCCGTGCTGATCGCCAATTCCGTCGGCAACATTCTCGTCGAACGGTACCGTTTTCTTTTCCCTTACGTTGTCTGGATTGATCGATCGAACCTTTTTTCACTGCATTTTTCATGTTTCTGATGTGCGTTATCTGGAAAGTGTGATTTGAATGGTTTTGTTGTGTAGTTGATCGTTTTGTTGTAGTTTTCGTGCCGATTTCTTTGATGATTGTGTTAAAAAGTGCGATTAGCTTCAGATGTACTCCAATTAGAATTGAAATTGGTTTGAGAATTTAGTGTTTAGGAGTGGAATGATGAGATAAAGGGGATAGCAGAGTCGTCTGGCATCTACTTTAACTTAGATTTGACTTCGAGTTCTGATTGGTTAGGAATTCTTTGTCATCTAACTTCATGCGATTGAACGGTGGATCGTGATTGTTTTTTTTTTTTGTTTGTTTGTTTGTTTATTAGGTTTCATGGAGTTCCGGCGGAGGAGCGATTGCATTGGCGATCCTTTCTAGTGAAGCTGGGAGCAGATAATCTCAAAGCTGCAAAAAATGAAGAACTCTTTGTTGCTTCACACAAGTGAGTGGAATCTTCCGATCATTCTTTAGAAGCAATTCTGAATAATTTTTGGTGATGCATCATAATTGAAAACTAATCTTTGCAAGAAATGACTACAGTTTTCATACTCTGCATGTGAGGTACCGATTGTTGATCTCCCCCACTCTAGGGTGAAAAGGAGAAACTCAAAGGAGAACGATTGTGCCTCATCCTCCTCTTCTATTGAGCTTCATCCCTTAGTATTTTGACCTCATCTAAAATTTAAGGACTTGACCATAGCATTTTCAAATGCGTTAGGGGAATGTATGGCGTTTATTTGCGTGATTATTGTTATTATGTATTAGTATCATGATTCTTGCCAAGTCCATTAAATACGATAGTATATAAAGTGGCATACTGACCTTAGTTTTTGCATTTTTAATAATACATTATTGTACTTCTGCAATAATGTCAATATGAGTCATGTTCTTAGGATTTTCCTATTGACCCCCTTGATCCTTTGAAGAACTTGTTGACACGATCTAGTGCCTCGATCGTCATTGTTATTCTTGCATAGCATAAACCAATTTGAACATAAGCGTGCAACTTCCTTTCTTTTCTGTATAATATAAATGATATCCACTCTGCCAAGCAATGACTGCACGAATAACAGACTCTTCTTAGGTACCTTCTTTTTCCAAAAGCCTCTAGGTCATCTCCCTAGAAATTGCCTAACTTACGATGTAGGATCTTAAAGATGGATTAAAACCTTTGAAAATGGATTGAAGAGAAGTCTATTCTACCACTTCTCTATCACTTTAATGTCTTTTAAGAGTAAGGTTCCACCCATGGGATATTTTGTATGTAAAAAATGATCGTCATTTTGCTTCCAGTTATTTATTGTTATGGGCTGAGTACGCATTTATCTAATCATCCTTCCAAAATCTATTTTTTCGTCCTTCCTAGTTCATCCAACTCAAGTGGGAGATGTTAAAAACATAATAGCAGCGGGCAACAACTACAAGCCTCTAGGGGCTTATTGAACCAATGTTAAAATGCGTGGTAGTTGCCAAAGGCATCTTTCATTGAATACTTAGAATAAAATTATGCCACAATGAATTGGCTTCTGCAAATCTCTAGTACGAAAGTAACAAGGGCTGTGTTCTTAGCTCAAATGGTCAACAATGTTTGAGATAAACTGTTTTCCTGCTAGTGCTAAATAAAGTACTCCCCTCTCTAAATCTGGCCGTTCCCTTCGATAATTCCTCTTTTATTATTTATATTATTATTATTATTATTATTTTCCCTTTTAATTAATAGACTGCCCTTCTTACAAGGGAATCTTAAATAACAAGATTAGCCAGTGGCTTGAATAAGAGTCAACCTTCCCCATTTAAAATGAAAGCATTTCTCATACATTACATCAATCAATCCCTTTCCATTTTGTGCTCATTGGATTGTTTTACTGTAGCTGGTTTTACCCGTTGAATCTGTCTAATTTAACTTTCTGTAACAGGTCTGTATATATTGTATACACTGTGCTTGGCGATGTTGCAGTTTATGTTGTTGGGAAGGACGAATATGATGAATTAGCTTGTAAGTAACTCAATTCCCAGCCCCCCTCTACAGTGTTTCTTTTTACCCTTATGTTTTAACTTGATCTTTTTGTTATATATCCTCTGCATTAATGTCATTTTCGCTTCTTCAAGTGGCAGAAGTGATCTTTGTAATAACATCATCGATAAAGGATGCCTGTGGGAAAGCTCCAACTGAGCGCTTGTTTCTTGACAAATATGGAAAGATTTGTTTATGTCTTGATGAAATTGTCTGGACGGTATGTCTTTTCTTTTTTCCCTCACTCAGAATCTTACTCGTAGGTTTTGTGGCTGAGCTGGCAAAAGTCATGGGGCTCAAGGCTTATAATTCAGCCAGATATAGTGATAGACGTGTTAAAACTTAGATATTTAATTCAAGAAAATACTTTGCGAATTGCCTTTGAGAGAACCGAGTGTCTGC

mRNA sequence

AAAAAAAGCTGCGAGAGAGAATCTGGGATTGTAAGATTTATTTCGAGGCTTCGAATTTTCGCGGTGGCAACCAGATTTCTTCCTTCAGAAACTCCGATCGAACAGTTTAGACGGCGAAAGATCAGGCATGTTGCTTGCCGTGCTGATCGCCAATTCCGTCGGCAACATTCTCGTCGAACGGTTTCATGGAGTTCCGGCGGAGGAGCGATTGCATTGGCGATCCTTTCTAGTGAAGCTGGGAGCAGATAATCTCAAAGCTGCAAAAAATGAAGAACTCTTTGTTGCTTCACACAAGTCTGTATATATTGTATACACTGTGCTTGGCGATGTTGCAGTTTATGTTGTTGGGAAGGACGAATATGATGAATTAGCTTTGGCAGAAGTGATCTTTGTAATAACATCATCGATAAAGGATGCCTGTGGGAAAGCTCCAACTGAGCGCTTGTTTCTTGACAAATATGGAAAGATTTGTTTATGTCTTGATGAAATTGTCTGGACGGTATGTCTTTTCTTTTTTCCCTCACTCAGAATCTTACTCGTAGGTTTTGTGGCTGAGCTGGCAAAAGTCATGGGGCTCAAGGCTTATAATTCAGCCAGATATAGTGATAGACGTGTTAAAACTTAGATATTTAATTCAAGAAAATACTTTGCGAATTGCCTTTGAGAGAACCGAGTGTCTGC

Coding sequence (CDS)

ATGTTGCTTGCCGTGCTGATCGCCAATTCCGTCGGCAACATTCTCGTCGAACGGTTTCATGGAGTTCCGGCGGAGGAGCGATTGCATTGGCGATCCTTTCTAGTGAAGCTGGGAGCAGATAATCTCAAAGCTGCAAAAAATGAAGAACTCTTTGTTGCTTCACACAAGTCTGTATATATTGTATACACTGTGCTTGGCGATGTTGCAGTTTATGTTGTTGGGAAGGACGAATATGATGAATTAGCTTTGGCAGAAGTGATCTTTGTAATAACATCATCGATAAAGGATGCCTGTGGGAAAGCTCCAACTGAGCGCTTGTTTCTTGACAAATATGGAAAGATTTGTTTATGTCTTGATGAAATTGTCTGGACGGTATGTCTTTTCTTTTTTCCCTCACTCAGAATCTTACTCGTAGGTTTTGTGGCTGAGCTGGCAAAAGTCATGGGGCTCAAGGCTTATAATTCAGCCAGATATAGTGATAGACGTGTTAAAACTTAG

Protein sequence

MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCLDEIVWTVCLFFFPSLRILLVGFVAELAKVMGLKAYNSARYSDRRVKT

Homology

[Close]

BLAST of Lcy12g016940 vs. ExPASy Swiss-Prot
Match: C0HLF1 (TSET complex member tstD OS=Dictyostelium discoideum OX=44689 GN=tstD PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.4e-12
Identity = 42/124 (33.87%), Postives = 72/124 (58.06%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFH-GVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVY 60
           M+ ++LI N+ GNI+  +++  +  E++  +   L +   D    +KNE+  V       
Sbjct: 1   MINSLLITNNNGNIVFSKYYSNINDEKQSEYEKLLYQFTKDEWVNSKNEKHLVTEFSGYI 60

Query: 61  IVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDAC-GKAPTERLFLDKYGKICLCL 120
            V+T +GD+ +++ G +E DELAL++V F I  S+KD C  K  TE+ F+++  K  L L
Sbjct: 61  TVFTNVGDLMLFLCGSEEMDELALSDVFFPIIESLKDICKKKGVTEQNFIEQIPKFILYL 120

Query: 121 DEIV 123
           DEI+
Sbjct: 121 DEII 124

[Close]

BLAST of Lcy12g016940 vs. ExPASy TrEMBL
Match: A0A6J1BYX2 (Coatomer subunit zeta OS=Momordica charantia OX=3673 GN=LOC111006502 PE=3 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 2.9e-61
Identity = 122/124 (98.39%), Postives = 123/124 (99.19%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYI 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLK AKNEEL+VASHKSVYI
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCLDE 120
           VYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCLDE
Sbjct: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCLDE 120

Query: 121 IVWT 125
           IVWT
Sbjct: 121 IVWT 124

[Close]

BLAST of Lcy12g016940 vs. ExPASy TrEMBL
Match: A0A5D3E691 (Coatomer subunit zeta OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007430 PE=3 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 6.5e-61
Identity = 121/124 (97.58%), Postives = 123/124 (99.19%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYI 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLK AKNEEL+VASHKSVYI
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCLDE 120
           VYTVLGDVAVYVVGKDEYDELALAEVIFVITS+IKDACGKAPTERLFLDKYGKICLCLDE
Sbjct: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE 120

Query: 121 IVWT 125
           IVWT
Sbjct: 121 IVWT 124

[Close]

BLAST of Lcy12g016940 vs. ExPASy TrEMBL
Match: A0A1S3CRC6 (Coatomer subunit zeta OS=Cucumis melo OX=3656 GN=LOC103503824 PE=3 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 6.5e-61
Identity = 121/124 (97.58%), Postives = 123/124 (99.19%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYI 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLK AKNEEL+VASHKSVYI
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCLDE 120
           VYTVLGDVAVYVVGKDEYDELALAEVIFVITS+IKDACGKAPTERLFLDKYGKICLCLDE
Sbjct: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE 120

Query: 121 IVWT 125
           IVWT
Sbjct: 121 IVWT 124

[Close]

BLAST of Lcy12g016940 vs. ExPASy TrEMBL
Match: A0A6J1IMX0 (Coatomer subunit zeta OS=Cucurbita maxima OX=3661 GN=LOC111476670 PE=3 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 8.5e-61
Identity = 121/124 (97.58%), Postives = 122/124 (98.39%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYI 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLK AKNEELFVASHKSVYI
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCLDE 120
           VYTVLGDVAVYVVGKDEYDELALAEVIFV+TSSIKDACGKAPTER FLDKYGKICLCLDE
Sbjct: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVVTSSIKDACGKAPTERSFLDKYGKICLCLDE 120

Query: 121 IVWT 125
           IVWT
Sbjct: 121 IVWT 124

[Close]

BLAST of Lcy12g016940 vs. ExPASy TrEMBL
Match: A0A5A7TBS4 (Coatomer subunit zeta OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G003660 PE=3 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 8.5e-61
Identity = 120/124 (96.77%), Postives = 123/124 (99.19%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYI 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLK AKNEEL+VASHKSVYI
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCLDE 120
           VYTVLGD+AVYVVGKDEYDELALAEVIFVITS+IKDACGKAPTERLFLDKYGKICLCLDE
Sbjct: 61  VYTVLGDIAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE 120

Query: 121 IVWT 125
           IVWT
Sbjct: 121 IVWT 124

[Close]

BLAST of Lcy12g016940 vs. NCBI nr
Match: XP_022134177.1 (uncharacterized protein LOC111006502 [Momordica charantia])

HSP 1 Score: 244.6 bits (623), Expect = 6.0e-61
Identity = 122/124 (98.39%), Postives = 123/124 (99.19%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYI 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLK AKNEEL+VASHKSVYI
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCLDE 120
           VYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCLDE
Sbjct: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCLDE 120

Query: 121 IVWT 125
           IVWT
Sbjct: 121 IVWT 124

[Close]

BLAST of Lcy12g016940 vs. NCBI nr
Match: XP_008466411.1 (PREDICTED: uncharacterized protein LOC103503824 [Cucumis melo] >TYK31432.1 SNARE-like superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 243.4 bits (620), Expect = 1.3e-60
Identity = 121/124 (97.58%), Postives = 123/124 (99.19%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYI 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLK AKNEEL+VASHKSVYI
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCLDE 120
           VYTVLGDVAVYVVGKDEYDELALAEVIFVITS+IKDACGKAPTERLFLDKYGKICLCLDE
Sbjct: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE 120

Query: 121 IVWT 125
           IVWT
Sbjct: 121 IVWT 124

[Close]

BLAST of Lcy12g016940 vs. NCBI nr
Match: XP_022936551.1 (uncharacterized protein LOC111443125 [Cucurbita moschata] >XP_022976214.1 uncharacterized protein LOC111476670 [Cucurbita maxima] >KAG6591575.1 TSET complex member tstD, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024463.1 hypothetical protein SDJN02_13278 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 243.0 bits (619), Expect = 1.8e-60
Identity = 121/124 (97.58%), Postives = 122/124 (98.39%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYI 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLK AKNEELFVASHKSVYI
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCLDE 120
           VYTVLGDVAVYVVGKDEYDELALAEVIFV+TSSIKDACGKAPTER FLDKYGKICLCLDE
Sbjct: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVVTSSIKDACGKAPTERSFLDKYGKICLCLDE 120

Query: 121 IVWT 125
           IVWT
Sbjct: 121 IVWT 124

[Close]

BLAST of Lcy12g016940 vs. NCBI nr
Match: XP_023536268.1 (uncharacterized protein LOC111797492 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 243.0 bits (619), Expect = 1.8e-60
Identity = 121/124 (97.58%), Postives = 122/124 (98.39%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYI 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLK AKNEELFVASHKSVYI
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCLDE 120
           VYTVLGDVAVYVVGKDEYDELALAEVIFV+TSSIKDACGKAPTER FLDKYGKICLCLDE
Sbjct: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVVTSSIKDACGKAPTERSFLDKYGKICLCLDE 120

Query: 121 IVWT 125
           IVWT
Sbjct: 121 IVWT 124

[Close]

BLAST of Lcy12g016940 vs. NCBI nr
Match: KAA0038809.1 (SNARE-like superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 243.0 bits (619), Expect = 1.8e-60
Identity = 120/124 (96.77%), Postives = 123/124 (99.19%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYI 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLK AKNEEL+VASHKSVYI
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCLDE 120
           VYTVLGD+AVYVVGKDEYDELALAEVIFVITS+IKDACGKAPTERLFLDKYGKICLCLDE
Sbjct: 61  VYTVLGDIAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE 120

Query: 121 IVWT 125
           IVWT
Sbjct: 121 IVWT 124

[Close]

BLAST of Lcy12g016940 vs. TAIR 10
Match: AT1G15370.1 (SNARE-like superfamily protein )

HSP 1 Score: 214.9 bits (546), Expect = 4.8e-56
Identity = 99/123 (80.49%), Postives = 115/123 (93.50%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYI 60
           M+LAVL ANSVGN+L+ERF+GVPAEERLHWRSFLVKLGADNLK  KNEEL VA HKSVYI
Sbjct: 1   MILAVLFANSVGNVLIERFNGVPAEERLHWRSFLVKLGADNLKGVKNEELLVACHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCLDE 120
           VYT+LGDV++++VGKDEYDELALAE I++IT+++KD CGK PTER+FLDKYG+ICLCLDE
Sbjct: 61  VYTMLGDVSIFLVGKDEYDELALAETIYIITAAVKDVCGKPPTERVFLDKYGRICLCLDE 120

Query: 121 IVW 124
           IVW
Sbjct: 121 IVW 123

The following BLAST results are available for this feature:

BLAST of Lcy12g016940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
C0HLF1	1.4e-12	33.87	TSET complex member tstD OS=Dictyostelium discoideum OX=44689 GN=tstD PE=1 SV=1	[more]

BLAST of Lcy12g016940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BYX2	2.9e-61	98.39	Coatomer subunit zeta OS=Momordica charantia OX=3673 GN=LOC111006502 PE=3 SV=1	[more]
A0A5D3E691	6.5e-61	97.58	Coatomer subunit zeta OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A1S3CRC6	6.5e-61	97.58	Coatomer subunit zeta OS=Cucumis melo OX=3656 GN=LOC103503824 PE=3 SV=1	[more]
A0A6J1IMX0	8.5e-61	97.58	Coatomer subunit zeta OS=Cucurbita maxima OX=3661 GN=LOC111476670 PE=3 SV=1	[more]
A0A5A7TBS4	8.5e-61	96.77	Coatomer subunit zeta OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92...	[more]

BLAST of Lcy12g016940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134177.1	6.0e-61	98.39	uncharacterized protein LOC111006502 [Momordica charantia]	[more]
XP_008466411.1	1.3e-60	97.58	PREDICTED: uncharacterized protein LOC103503824 [Cucumis melo] >TYK31432.1 SNARE...	[more]
XP_022936551.1	1.8e-60	97.58	uncharacterized protein LOC111443125 [Cucurbita moschata] >XP_022976214.1 unchar...	[more]
XP_023536268.1	1.8e-60	97.58	uncharacterized protein LOC111797492 [Cucurbita pepo subsp. pepo]	[more]
KAA0038809.1	1.8e-60	96.77	SNARE-like superfamily protein [Cucumis melo var. makuwa]	[more]

BLAST of Lcy12g016940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15370.1	4.8e-56	80.49	SNARE-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.450.60		coord: 1..146 e-value: 1.0E-13 score: 53.4
None	No IPR available	PANTHER	PTHR11043:SF19	SUBFAMILY NOT NAMED	coord: 3..127
IPR039652	Coatomer subunit zeta	PANTHER	PTHR11043	ZETA-COAT PROTEIN	coord: 3..127
IPR011012	Longin-like domain superfamily	SUPERFAMILY	64356	SNARE-like	coord: 1..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy12g016940.1	Lcy12g016940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0006891	intra-Golgi vesicle-mediated transport
biological_process	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
cellular_component	GO:0030126	COPI vesicle coat
cellular_component	GO:0000139	Golgi membrane