
Lcy12g016560 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAACTCTTTGTTCATCTCGTTCCGGCAGCTCTGCGATGGCAACTTCCGAATCAAAACCCGACGATCAGCTTATTCCGTTGCCGGAATCTGAATCGCAGCTCTCGGTTCTCATCTTCGGTACGATTCTTCGTTTCTCTTTCTTTCTCTTCAACGCACACATTCAAAAGACGCGCGAAAACGCGAACTACTACGCTTTTTCGCAATGAAAATCTGTCTGCCTGACATTGTTTAGCGAGATTATTCGTTAGATTTTGCCTCACCTATTGCGAAAAATCGACATTGTTAATCGTCTACTAGTTGTGCTTAAAGAAGTAAGAAATGCTTTCGGATCAAATTATAGCTAGCTGATGAAACTTTGTCTCAATTGCATTTGATAATGTTCGGCGCAGGTTTGACTGGAAATGCCGATTAGGTTAACTTTCTCGGCTTCTGATACTATGAGTTTGTGTAACTCAAATCCGAAATAGATAGTCTGTTTGTTTTAGGCACATTATTGAACAAATCGGCAGTGCTAGTTGTACTTTTTTAAGACGAGGAGGTATTTGTATTCTTAAACTTAGAGTCTGCCTTCTCCAAGATGTATTAAGAGTCTGACTGCTCCAAATGTTGGCTCTGCTGTGTATTCGTATTATTCTTAACACTACTTGAGTCGAGAATTGTGTTCAGAAACGGCCAGTCTTCATATCTTATGATGCTCCCTCCATTTATATATGTAGTGCATCTCTTATTTGATTTTTTAGCTTCACTTAACCGTAACAGAATGAGAAGTGATATGTATTAATTCTCTTGCTTTGAGGTGGTTGTATTCGAAGAAAGGTTTCTCCTCTGCAGATTTATAGGCTTATAAATCATATCAGACTAAATGCACTCATGTAATTAGATTGGTTTTGGACAGAGGTGGTAAATAATAGTTGAAACCTATGAAAACTTTGGAGCCCCGAAACAAGCGTGTTGATCAGTTCAAACAAAGACGTGCTTGCTTTGATCACAAAACCATTTTTTATTTTTCTCTTACTTTCATTGCATGTTGAAGTGTGTTGATCACGCCCTGATCTTTGGATTAGTCTGTATCATTCGATTAGAGAACGCTACTTCTGATTTTTTTTTTATGCCGCAGATATATCTCAACAGGCCCAAGGGGCTATGGAGAACATGCTTAGAATGATTAGGTTTGTTAATCATCAACAGTAGCTTGATTTGCCTCTTTCTTCTTTTTTCTTTTTGATACTTCTGGTTTATTCATTACTGATAAATAATTGATATCATCGTCATATTGACAGTGAAAATTTAAAATTTTCATATAAAGGATTTAAAAAGCAGGAACTCCTTTTCAAAAAAAAAAAAAAAAGCATGAACTCTTCGAAATATTACATGATTGAGAGAATGAAAATTGTTTGATGATATGACGTTTTCTTCGATGTTTAGATTCTAGTATATGCTTTCAATAAATTCTATTAATAAATTTGTGCCAGCAAAAGAGTACTGATGAATATATTCTAGTGTATGCTTTCAATAAAGTACTTTTATTTACCTCTTTTCCTTCTTCATATTAGAGCATTCTTCCAGTCGTCAGATTTAAATATACTGTGAAATTATTTGTTTTTTGTCGTCCACCAATACCATCTATCTTCCCATTTCTCATGTGCCCGTCATTTTCTGAATCTTCTACCCCTAACGACACTCAAATTAATTGTATAAAACGTATAGTACATCTACGTCCTAATGCTAACCTGAGTCTTCTCAACTGTTTGCAGTGAAATTGATCAAAACGCCGTTGGAATATTGGAAGACATAGAAAAGTGTAGGGGTACTGCTCTTGACAGGAAGGGAGTCCTAGAGGAAGAGAAACAACAATTTCAACAAACTGCTTACACTGTTTTAGACATGCTCAACAACGGAGGGGGAACGCTGTAA ATGGGAACTCTTTGTTCATCTCGTTCCGGCAGCTCTGCGATGGCAACTTCCGAATCAAAACCCGACGATCAGCTTATTCCGTTGCCGGAATCTGAATCGCAGCTCTCGGTTCTCATCTTCGATATATCTCAACAGGCCCAAGGGGCTATGGAGAACATGCTTAGAATGATTAGTGAAATTGATCAAAACGCCGTTGGAATATTGGAAGACATAGAAAAGTGTAGGGGTACTGCTCTTGACAGGAAGGGAGTCCTAGAGGAAGAGAAACAACAATTTCAACAAACTGCTTACACTGTTTTAGACATGCTCAACAACGGAGGGGGAACGCTGTAA ATGGGAACTCTTTGTTCATCTCGTTCCGGCAGCTCTGCGATGGCAACTTCCGAATCAAAACCCGACGATCAGCTTATTCCGTTGCCGGAATCTGAATCGCAGCTCTCGGTTCTCATCTTCGATATATCTCAACAGGCCCAAGGGGCTATGGAGAACATGCTTAGAATGATTAGTGAAATTGATCAAAACGCCGTTGGAATATTGGAAGACATAGAAAAGTGTAGGGGTACTGCTCTTGACAGGAAGGGAGTCCTAGAGGAAGAGAAACAACAATTTCAACAAACTGCTTACACTGTTTTAGACATGCTCAACAACGGAGGGGGAACGCTGTAA MGTLCSSRSGSSAMATSESKPDDQLIPLPESESQLSVLIFDISQQAQGAMENMLRMISEIDQNAVGILEDIEKCRGTALDRKGVLEEEKQQFQQTAYTVLDMLNNGGGTL Homology
BLAST of Lcy12g016560 vs. ExPASy TrEMBL
Match: A0A6J1FEZ1 (uncharacterized protein LOC111443468 OS=Cucurbita moschata OX=3662 GN=LOC111443468 PE=4 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 8.0e-39 Identity = 91/105 (86.67%), Postives = 95/105 (90.48%), Query Frame = 0
BLAST of Lcy12g016560 vs. ExPASy TrEMBL
Match: A0A0A0LJE0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881050 PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 1.0e-38 Identity = 90/101 (89.11%), Postives = 93/101 (92.08%), Query Frame = 0
BLAST of Lcy12g016560 vs. ExPASy TrEMBL
Match: A0A6J1IGC1 (uncharacterized protein LOC111476676 OS=Cucurbita maxima OX=3661 GN=LOC111476676 PE=4 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 1.4e-38 Identity = 91/105 (86.67%), Postives = 94/105 (89.52%), Query Frame = 0
BLAST of Lcy12g016560 vs. ExPASy TrEMBL
Match: A0A5A7TBQ0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007070 PE=4 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 8.8e-38 Identity = 91/104 (87.50%), Postives = 94/104 (90.38%), Query Frame = 0
BLAST of Lcy12g016560 vs. ExPASy TrEMBL
Match: A0A1S3CR82 (uncharacterized protein LOC103503784 OS=Cucumis melo OX=3656 GN=LOC103503784 PE=4 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 8.8e-38 Identity = 91/104 (87.50%), Postives = 94/104 (90.38%), Query Frame = 0
BLAST of Lcy12g016560 vs. NCBI nr
Match: XP_038898230.1 (uncharacterized protein LOC120085955 isoform X2 [Benincasa hispida]) HSP 1 Score: 173.3 bits (438), Expect = 1.1e-39 Identity = 90/97 (92.78%), Postives = 93/97 (95.88%), Query Frame = 0
BLAST of Lcy12g016560 vs. NCBI nr
Match: XP_038898231.1 (uncharacterized protein LOC120085955 isoform X3 [Benincasa hispida]) HSP 1 Score: 173.3 bits (438), Expect = 1.1e-39 Identity = 90/97 (92.78%), Postives = 93/97 (95.88%), Query Frame = 0
BLAST of Lcy12g016560 vs. NCBI nr
Match: XP_038898229.1 (uncharacterized protein LOC120085955 isoform X1 [Benincasa hispida]) HSP 1 Score: 173.3 bits (438), Expect = 1.1e-39 Identity = 90/97 (92.78%), Postives = 93/97 (95.88%), Query Frame = 0
BLAST of Lcy12g016560 vs. NCBI nr
Match: XP_022937053.1 (uncharacterized protein LOC111443468 [Cucurbita moschata]) HSP 1 Score: 169.5 bits (428), Expect = 1.6e-38 Identity = 91/105 (86.67%), Postives = 95/105 (90.48%), Query Frame = 0
BLAST of Lcy12g016560 vs. NCBI nr
Match: XP_004136463.2 (uncharacterized protein LOC101215419 [Cucumis sativus] >KAE8651370.1 hypothetical protein Csa_001898 [Cucumis sativus]) HSP 1 Score: 169.1 bits (427), Expect = 2.1e-38 Identity = 90/101 (89.11%), Postives = 93/101 (92.08%), Query Frame = 0
BLAST of Lcy12g016560 vs. TAIR 10
Match: AT5G25570.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 101.3 bits (251), Expect = 5.1e-22 Identity = 53/99 (53.54%), Postives = 74/99 (74.75%), Query Frame = 0
BLAST of Lcy12g016560 vs. TAIR 10
Match: AT5G25570.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 101.3 bits (251), Expect = 5.1e-22 Identity = 53/99 (53.54%), Postives = 74/99 (74.75%), Query Frame = 0
BLAST of Lcy12g016560 vs. TAIR 10
Match: AT5G25570.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages. ) HSP 1 Score: 85.9 bits (211), Expect = 2.2e-17 Identity = 54/131 (41.22%), Postives = 74/131 (56.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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