Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAAGGAGAACAGCAATCGGGGACCGGGGGTTTCAGGTTCTCGTCGGACGCGGTCTCAGATAGCGCCGGATTGGACGGCGGCGGATTGCCTCGTTCTTGTTAATGTGATTGCGGCTGTGGAGGCCGATTGTTTGAAAGCTTTGTCTAGCTATCAGAAATGGAAGATTGTTGCAGAGAACTGCACGTCTTTGGATGTGGCTCGGACTTCGAATCAGTGCAGGAGGAAGTGGGACTGTTTGTTGATTGAACATGATGTTATCAAGCAATGGGAGTTAGAGATGCCGGATGATGATTCCTATTGGTGTTTGGAGAGTGGAAGGAGAAAGGAATTGGGACTTCCTGAGAATTTCGACGAGGAGCTGTTCAAAGCAATTGATAATGTCGCCACGATGAGGGAGAATCAGTCGGATACGGAGCCGGATAGCGATCCCGAGGCTATGGTTGAGATGGTTGATGAAATTGCAGAGCCTGGTATGGTTCTTTATTTCCTAGAGTGCTTATAGATAACATTTCTATTGTAGTAGGGTTTCATGAGAACTTGTACACTCCAGTGTTTCTTTGAATACACTTGATAATAATCATTTTTTGCAACTTAATGACTTAAAACCCTTCGGTGAGCAAGGGCCTTCCTAGAGATTAGCAGGGTGGGCGACGAACATGATGCAAGGACTGGCTCTAATTTGTTTGCTTCGAAACGTTTGTTGTTTTGTTCTTGCTCTTAATGCCGCAAAGTTAATAATATATATATATATATATAACCTGTTGCTTGAAATCTCTGTATTTTTTGTTCTTAATCTTGAGCAACTTGATTGTTTCTATTATATCACATCATCACATCAATGTTAAAGACGATTTATGTTTAATTTTCTATGAGCTCCCCAAAGTTTTGGAGGCGTTGCCTTTTGGACCTTTTTTGTCTGGAAGTTGAGTAGATGTTTGTATTAAACAGCAAACAAAAGCTAAACATTGTAAGGAAAGAGTATATCAACTACTTCAGAATTTCAGATACTATGCCAGCTTCAAACATGTCATGCATATATATGATTGTGTCGAGAAATTATTTATATATCACATGTATATATCATAATGCTTCAGTGGTCCTATTCTTGAATTTAATGCTTAGGGTTGTGTGAGGGTCGTTCTTTCAACATTTAGTTTTATGTGGGTTTTCCATATTCAAGATTGATGTTCGTCCTGAGATACAGAAGAACTCCTGGTCGGTATTGTAGCCATTCCAGGATCTAGATTGTTTGGTTCTTTTCCTTCTAATCCATTAGGTGCAATTTAAACTTTAGTATTCTGCTAACTTATTTCGTACAAGGCCTGATGGATGGGGTTGCCTTTCATAGTTATTTCGACGTCCTAATTTTCTCATGGAGATGAAAGGCATTTCTTACTTAATTTTTCATGTCGCTTAATTGTGAATTTTTTGAACCAAAAAGGCTGGTTGACAAAAATGTCATAACTGCAGAAATTTCTTTCCACCAACTTCTAAACTGTGGTTTAAGTGTGTGATGGATCTTATAATTGCTTCCTTCAAATTACTTCATTAATATTGGTTTTTTTCTCCTTTCTGATTTTTCATGTTAGGCCCTAAAAGGCATAGACGTCGTTCAATGTCTAAGCGAAATCAAGACCTAGAGAAATCTTTTAAATGTGAAGATGAAGAAGCAGAAAAAAAACTTCCAGTACTCTGTCTGGAAGCACAGCCTCGTGAATGCTACATCAAAAGCTACGGAGAAAAGGCGACCGATAACCATGAACCCGAAGAGCAAATGATGGTGAAGAAATTGCTTGAAAATGCAGAAAAAATTCAAGCAATTGTGTCTGAGAATGCAGAGTATGCAACTTCTGATGAAAAGAACATCGACCACCGAATTGATTTGGTAAGGTGTCAAGGGAGCAAGCTTATCAGATGTCTTGGAGATTTTCTCAACACCATTAATGACCTCCGTGGCCTGCTCGAAGATCACGAGTGA
mRNA sequence
ATGAAGAAGGAGAACAGCAATCGGGGACCGGGGGTTTCAGGTTCTCGTCGGACGCGGTCTCAGATAGCGCCGGATTGGACGGCGGCGGATTGCCTCGTTCTTGTTAATGTGATTGCGGCTGTGGAGGCCGATTGTTTGAAAGCTTTGTCTAGCTATCAGAAATGGAAGATTGTTGCAGAGAACTGCACGTCTTTGGATGTGGCTCGGACTTCGAATCAGTGCAGGAGGAAGTGGGACTGTTTGTTGATTGAACATGATGTTATCAAGCAATGGGAGTTAGAGATGCCGGATGATGATTCCTATTGGTGTTTGGAGAGTGGAAGGAGAAAGGAATTGGGACTTCCTGAGAATTTCGACGAGGAGCTGTTCAAAGCAATTGATAATGTCGCCACGATGAGGGAGAATCAGTCGGATACGGAGCCGGATAGCGATCCCGAGGCTATGGTTGAGATGGTTGATGAAATTGCAGAGCCTGGCCCTAAAAGGCATAGACGTCGTTCAATGTCTAAGCGAAATCAAGACCTAGAGAAATCTTTTAAATGTGAAGATGAAGAAGCAGAAAAAAAACTTCCAGTACTCTGTCTGGAAGCACAGCCTCGTGAATGCTACATCAAAAGCTACGGAGAAAAGGCGACCGATAACCATGAACCCGAAGAGCAAATGATGGTGAAGAAATTGCTTGAAAATGCAGAAAAAATTCAAGCAATTGTGTCTGAGAATGCAGAGTATGCAACTTCTGATGAAAAGAACATCGACCACCGAATTGATTTGGTAAGGTGTCAAGGGAGCAAGCTTATCAGATGTCTTGGAGATTTTCTCAACACCATTAATGACCTCCGTGGCCTGCTCGAAGATCACGAGTGA
Coding sequence (CDS)
ATGAAGAAGGAGAACAGCAATCGGGGACCGGGGGTTTCAGGTTCTCGTCGGACGCGGTCTCAGATAGCGCCGGATTGGACGGCGGCGGATTGCCTCGTTCTTGTTAATGTGATTGCGGCTGTGGAGGCCGATTGTTTGAAAGCTTTGTCTAGCTATCAGAAATGGAAGATTGTTGCAGAGAACTGCACGTCTTTGGATGTGGCTCGGACTTCGAATCAGTGCAGGAGGAAGTGGGACTGTTTGTTGATTGAACATGATGTTATCAAGCAATGGGAGTTAGAGATGCCGGATGATGATTCCTATTGGTGTTTGGAGAGTGGAAGGAGAAAGGAATTGGGACTTCCTGAGAATTTCGACGAGGAGCTGTTCAAAGCAATTGATAATGTCGCCACGATGAGGGAGAATCAGTCGGATACGGAGCCGGATAGCGATCCCGAGGCTATGGTTGAGATGGTTGATGAAATTGCAGAGCCTGGCCCTAAAAGGCATAGACGTCGTTCAATGTCTAAGCGAAATCAAGACCTAGAGAAATCTTTTAAATGTGAAGATGAAGAAGCAGAAAAAAAACTTCCAGTACTCTGTCTGGAAGCACAGCCTCGTGAATGCTACATCAAAAGCTACGGAGAAAAGGCGACCGATAACCATGAACCCGAAGAGCAAATGATGGTGAAGAAATTGCTTGAAAATGCAGAAAAAATTCAAGCAATTGTGTCTGAGAATGCAGAGTATGCAACTTCTGATGAAAAGAACATCGACCACCGAATTGATTTGGTAAGGTGTCAAGGGAGCAAGCTTATCAGATGTCTTGGAGATTTTCTCAACACCATTAATGACCTCCGTGGCCTGCTCGAAGATCACGAGTGA
Protein sequence
MKKENSNRGPGVSGSRRTRSQIAPDWTAADCLVLVNVIAAVEADCLKALSSYQKWKIVAENCTSLDVARTSNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWCLESGRRKELGLPENFDEELFKAIDNVATMRENQSDTEPDSDPEAMVEMVDEIAEPGPKRHRRRSMSKRNQDLEKSFKCEDEEAEKKLPVLCLEAQPRECYIKSYGEKATDNHEPEEQMMVKKLLENAEKIQAIVSENAEYATSDEKNIDHRIDLVRCQGSKLIRCLGDFLNTINDLRGLLEDHE
Homology
BLAST of Lcy12g016080 vs. ExPASy TrEMBL
Match:
A0A6J1CEU7 (trihelix transcription factor ASR3 OS=Momordica charantia OX=3673 GN=LOC111010559 PE=4 SV=1)
HSP 1 Score: 464.9 bits (1195), Expect = 2.4e-127
Identity = 239/288 (82.99%), Postives = 258/288 (89.58%), Query Frame = 0
Query: 1 MKKENSNRGPGVSGSRRTRSQIAPDWTAADCLVLVNVIAAVEADCLKALSSYQKWKIVAE 60
MK+E+ NRG GVSGSRRTRSQIAPDWTAA+CLVLVNVIAAVEADCLKALSSYQKWKIVAE
Sbjct: 1 MKQEDGNRGAGVSGSRRTRSQIAPDWTAAECLVLVNVIAAVEADCLKALSSYQKWKIVAE 60
Query: 61 NCTSLDVARTSNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWCLESGRRKELGLPENFDE 120
NCTSLDVARTSNQCRRKWDCLLIEHDVIKQWELEMPDDDSYW LESGRRKELGLPENFD+
Sbjct: 61 NCTSLDVARTSNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWSLESGRRKELGLPENFDK 120
Query: 121 ELFKAIDNVATMRENQSDTEPDSDPEAMVEMVDEIAEPGPKRHRRRSMSKRNQDLEKSFK 180
ELFKAIDNVATMR NQSDTEPDSDPEA VEM+DEI+EPGPKR RRRS+SKR+Q LEKS +
Sbjct: 121 ELFKAIDNVATMRANQSDTEPDSDPEAGVEMLDEISEPGPKRQRRRSISKRSQALEKSLE 180
Query: 181 CEDEEAEKKLPVLCLEAQPRECYIKSYGEKATDNHE-PEEQMMVKKLLENAEKIQAIVSE 240
CE+E+ E+K P+ EA+PREC+IKS GEK D+ E EEQMM KKLLEN E+IQAIVSE
Sbjct: 181 CEEED-EEKPPLNSPEAEPRECFIKSNGEKQIDSLELEEEQMMTKKLLENVEQIQAIVSE 240
Query: 241 NAEYATSDEKNIDHRIDLVRCQGSKLIRCLGDFLNTINDLRGLLEDHE 288
NAEYATSDEKN +HRID VR QG+ LIRCLGD LN INDL GL ED E
Sbjct: 241 NAEYATSDEKNTNHRIDSVRRQGNTLIRCLGDILNAINDLHGLFEDRE 287
BLAST of Lcy12g016080 vs. ExPASy TrEMBL
Match:
A0A6J1FMB3 (trihelix transcription factor ASR3-like OS=Cucurbita moschata OX=3662 GN=LOC111446515 PE=4 SV=1)
HSP 1 Score: 445.3 bits (1144), Expect = 2.0e-121
Identity = 230/289 (79.58%), Postives = 249/289 (86.16%), Query Frame = 0
Query: 1 MKKENSNRGPGVSGSRRTRSQIAPDWTAADCLVLVNVIAAVEADCLKALSSYQKWKIVAE 60
MK+E+ RG VSGSRRTRS+IAPDWTAADCLVLVNVIAAVEADC KALSS+QKWKIVAE
Sbjct: 1 MKEEDGKRGTEVSGSRRTRSRIAPDWTAADCLVLVNVIAAVEADCWKALSSFQKWKIVAE 60
Query: 61 NCTSLDVARTSNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWCLESGRRKELGLPENFDE 120
NCTSLDVAR SNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWCLESGRRKELGLP+NFDE
Sbjct: 61 NCTSLDVARNSNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWCLESGRRKELGLPDNFDE 120
Query: 121 ELFKAIDNVATMRENQSDTEPDSDPEAMVEMVDEIAEPGPKRHRRRSMSKRNQDLEKSFK 180
E+FKAIDNV +MR NQSDTEPDSDPEA VE VDE AEPGPKR RR SMS RNQ LEKS K
Sbjct: 121 EVFKAIDNVVSMRANQSDTEPDSDPEAAVEKVDEAAEPGPKRQRRCSMSTRNQSLEKSVK 180
Query: 181 CEDEEAEKKLPVLCLEAQPRECYIKSYGEKATDNHEPEEQMMVKKLLENAEKIQAIVSEN 240
CE+E+ E + V E + R CYIKS+GEKATD+ EPEEQ M KKLLE AEK+QAIVSEN
Sbjct: 181 CEEEDEEPQ--VSSPEVERRGCYIKSHGEKATDSTEPEEQTMAKKLLETAEKVQAIVSEN 240
Query: 241 AEYATSDEKNIDH--RIDLVRCQGSKLIRCLGDFLNTINDLRGLLEDHE 288
AEYATSDEKN ++ R + +R QGSKLI+CL DFLNTINDL LLED E
Sbjct: 241 AEYATSDEKNDNYNVRTNSIRHQGSKLIKCLEDFLNTINDLHSLLEDQE 287
BLAST of Lcy12g016080 vs. ExPASy TrEMBL
Match:
A0A6J1IN02 (trihelix transcription factor ASR3-like OS=Cucurbita maxima OX=3661 GN=LOC111476700 PE=4 SV=1)
HSP 1 Score: 443.7 bits (1140), Expect = 5.7e-121
Identity = 226/290 (77.93%), Postives = 253/290 (87.24%), Query Frame = 0
Query: 1 MKKENSNRGPGVSGSRRTRSQIAPDWTAADCLVLVNVIAAVEADCLKALSSYQKWKIVAE 60
MKKEN NRG GVSGSRRTRSQIAP+WTAA+CLVLVNVI AVEADC+KALSSYQKWKIVAE
Sbjct: 1 MKKENGNRGSGVSGSRRTRSQIAPEWTAAECLVLVNVIGAVEADCMKALSSYQKWKIVAE 60
Query: 61 NCTSLDVARTSNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWCLESGRRKELGLPENFDE 120
+CT+L+VARTSNQCR+KW+CLLIEHDVI+QWEL MP+DDSYWCLESGRRKELGLP+NFDE
Sbjct: 61 DCTALNVARTSNQCRKKWECLLIEHDVIRQWELTMPEDDSYWCLESGRRKELGLPDNFDE 120
Query: 121 ELFKAIDNVATMRENQSDTEPDSDPEAMVEMVDEIAEPGPKRHRRRSMSKRNQDLEKSFK 180
ELFKAI NV++MR NQSDTEPD+DPEA VE DEI+EPGPKR RR SMSKRNQ LEKS +
Sbjct: 121 ELFKAIYNVSSMRANQSDTEPDNDPEAAVENADEISEPGPKRQRRGSMSKRNQGLEKSLE 180
Query: 181 C---EDEEAEKKLPVLCLEAQPRECYIKSYGEKATDNHEPEEQMMVKKLLENAEKIQAIV 240
C E+EEAE++ + EA R+CYIK+ G KATD+ EPEEQMMVKKLLENAE +Q IV
Sbjct: 181 CKEDEEEEAEEQPLLSSPEADLRDCYIKNNGAKATDDIEPEEQMMVKKLLENAENVQEIV 240
Query: 241 SENAEYATSDEKNIDHRIDLVRCQGSKLIRCLGDFLNTINDLRGLLEDHE 288
SENAE TSDEKN + +L+R QGSKLIRCLGDFLNTINDLR LLED E
Sbjct: 241 SENAECVTSDEKNDKDQTNLIRRQGSKLIRCLGDFLNTINDLRDLLEDFE 290
BLAST of Lcy12g016080 vs. ExPASy TrEMBL
Match:
A0A0A0LDW0 (Myb-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G882960 PE=4 SV=1)
HSP 1 Score: 442.2 bits (1136), Expect = 1.7e-120
Identity = 238/311 (76.53%), Postives = 250/311 (80.39%), Query Frame = 0
Query: 1 MKKENS-NRGPGVSGSRRTRSQI--APDWTAADCLVLVNVIAAVEADCLKALSSYQKWKI 60
MKKEN+ NRG GVSGSRRTRSQI AP WTAADCLVLVNVIAAVEADCLKALSSYQKWKI
Sbjct: 1 MKKENAGNRGSGVSGSRRTRSQIAVAPGWTAADCLVLVNVIAAVEADCLKALSSYQKWKI 60
Query: 61 VAENCTSLDVARTSNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWCLESGRRKELGLPEN 120
VAENCTSLDV RTSNQCRRKWDCLLIEHDVIKQWEL+MPDDDSYWCL SGRRKELGLPEN
Sbjct: 61 VAENCTSLDVVRTSNQCRRKWDCLLIEHDVIKQWELKMPDDDSYWCLASGRRKELGLPEN 120
Query: 121 FDEELFKAIDNVATMRENQSDTEPDSDPEAMVEMVDEIAEPGPKRHRRRSMSKRNQDLEK 180
FDEELFKAIDNVA+MR NQSDTEPDSDPEA + DEIAEPGPKR RRRSMSK NQ LEK
Sbjct: 121 FDEELFKAIDNVASMRANQSDTEPDSDPEAAIGNADEIAEPGPKRQRRRSMSKSNQVLEK 180
Query: 181 SFKCE---------------------DEEAEKKLPVLCLEAQPRECYIKSYGEKATDNHE 240
S +CE EE E+K + E +PRECYIKS K TDN E
Sbjct: 181 SLECERNLGLEISLECKEVEDRGERGGEEVEEKPLLSSPELEPRECYIKSNESKVTDNIE 240
Query: 241 PEEQMMVKKLLENAEKIQAIVSENAEYATSDEKNIDHRIDLVRCQGSKLIRCLGDFLNTI 288
P+EQMM K LLENAEK+QAIVSENAEY TSDEK + +LVR QGSKLIRCLGD LNTI
Sbjct: 241 PKEQMMAKFLLENAEKVQAIVSENAEYTTSDEKCAKDQTNLVRHQGSKLIRCLGDILNTI 300
BLAST of Lcy12g016080 vs. ExPASy TrEMBL
Match:
A0A6J1FEH7 (trihelix transcription factor ASR3-like OS=Cucurbita moschata OX=3662 GN=LOC111443343 PE=4 SV=1)
HSP 1 Score: 441.4 bits (1134), Expect = 2.8e-120
Identity = 227/290 (78.28%), Postives = 254/290 (87.59%), Query Frame = 0
Query: 1 MKKENSNRGPGVSGSRRTRSQIAPDWTAADCLVLVNVIAAVEADCLKALSSYQKWKIVAE 60
MKKEN NRG GVSGSRRTRSQIAP+WTAA+CLVLVNVI AVEADCLKALSSYQKWKIVAE
Sbjct: 1 MKKENGNRGSGVSGSRRTRSQIAPEWTAAECLVLVNVIGAVEADCLKALSSYQKWKIVAE 60
Query: 61 NCTSLDVARTSNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWCLESGRRKELGLPENFDE 120
+CT+L+VARTSNQCR+KW+CLLIEHDVIKQWEL MP+DDSYWCLESGRRKELGLP+NFDE
Sbjct: 61 DCTALNVARTSNQCRKKWECLLIEHDVIKQWELTMPEDDSYWCLESGRRKELGLPDNFDE 120
Query: 121 ELFKAIDNVATMRENQSDTEPDSDPEAMVEMVDEIAEPGPKRHRRRSMSKRNQDLEKS-- 180
ELFKAIDNV++MR NQSDTEPD+DPEA VE DEI+EPGPKR RR SMSKRNQ LEKS
Sbjct: 121 ELFKAIDNVSSMRANQSDTEPDNDPEAAVENADEISEPGPKRQRRGSMSKRNQGLEKSLE 180
Query: 181 FKCEDEEAEKKLPVLCL-EAQPRECYIKSYGEKATDNHEPEEQMMVKKLLENAEKIQAIV 240
FK ++E+ ++ P+L E+ R+CYIK+ G ATD+ EPEEQMMVKKLLENAE +Q IV
Sbjct: 181 FKEDEEDEAEEQPLLSSPESDLRDCYIKNNGATATDDIEPEEQMMVKKLLENAENVQEIV 240
Query: 241 SENAEYATSDEKNIDHRIDLVRCQGSKLIRCLGDFLNTINDLRGLLEDHE 288
SENAE ATSDEKN + +L+R QGSKLIRCLGDFLNTINDLR LLED E
Sbjct: 241 SENAECATSDEKNDKDQTNLIRRQGSKLIRCLGDFLNTINDLRDLLEDCE 290
BLAST of Lcy12g016080 vs. NCBI nr
Match:
XP_022139752.1 (trihelix transcription factor ASR3 [Momordica charantia] >XP_022139827.1 trihelix transcription factor ASR3 [Momordica charantia])
HSP 1 Score: 464.9 bits (1195), Expect = 4.9e-127
Identity = 239/288 (82.99%), Postives = 258/288 (89.58%), Query Frame = 0
Query: 1 MKKENSNRGPGVSGSRRTRSQIAPDWTAADCLVLVNVIAAVEADCLKALSSYQKWKIVAE 60
MK+E+ NRG GVSGSRRTRSQIAPDWTAA+CLVLVNVIAAVEADCLKALSSYQKWKIVAE
Sbjct: 1 MKQEDGNRGAGVSGSRRTRSQIAPDWTAAECLVLVNVIAAVEADCLKALSSYQKWKIVAE 60
Query: 61 NCTSLDVARTSNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWCLESGRRKELGLPENFDE 120
NCTSLDVARTSNQCRRKWDCLLIEHDVIKQWELEMPDDDSYW LESGRRKELGLPENFD+
Sbjct: 61 NCTSLDVARTSNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWSLESGRRKELGLPENFDK 120
Query: 121 ELFKAIDNVATMRENQSDTEPDSDPEAMVEMVDEIAEPGPKRHRRRSMSKRNQDLEKSFK 180
ELFKAIDNVATMR NQSDTEPDSDPEA VEM+DEI+EPGPKR RRRS+SKR+Q LEKS +
Sbjct: 121 ELFKAIDNVATMRANQSDTEPDSDPEAGVEMLDEISEPGPKRQRRRSISKRSQALEKSLE 180
Query: 181 CEDEEAEKKLPVLCLEAQPRECYIKSYGEKATDNHE-PEEQMMVKKLLENAEKIQAIVSE 240
CE+E+ E+K P+ EA+PREC+IKS GEK D+ E EEQMM KKLLEN E+IQAIVSE
Sbjct: 181 CEEED-EEKPPLNSPEAEPRECFIKSNGEKQIDSLELEEEQMMTKKLLENVEQIQAIVSE 240
Query: 241 NAEYATSDEKNIDHRIDLVRCQGSKLIRCLGDFLNTINDLRGLLEDHE 288
NAEYATSDEKN +HRID VR QG+ LIRCLGD LN INDL GL ED E
Sbjct: 241 NAEYATSDEKNTNHRIDSVRRQGNTLIRCLGDILNAINDLHGLFEDRE 287
BLAST of Lcy12g016080 vs. NCBI nr
Match:
XP_038897371.1 (trihelix transcription factor ASR3 [Benincasa hispida])
HSP 1 Score: 458.4 bits (1178), Expect = 4.6e-125
Identity = 244/309 (78.96%), Postives = 259/309 (83.82%), Query Frame = 0
Query: 1 MKKENS-NRGPGVSGSRRTRSQI--APDWTAADCLVLVNVIAAVEADCLKALSSYQKWKI 60
MKKEN+ NRG GVSGSRRTRSQI APDWTAADCLVLVNVIAAVEADCLKALSSYQKWKI
Sbjct: 1 MKKENAGNRGLGVSGSRRTRSQIAVAPDWTAADCLVLVNVIAAVEADCLKALSSYQKWKI 60
Query: 61 VAENCTSLDVARTSNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWCLESGRRKELGLPEN 120
VAENCTSLDV RTSNQCRRKWDCLLIEHDVIKQWEL+MP+DDSYWCLESGRRKELGLP+N
Sbjct: 61 VAENCTSLDVVRTSNQCRRKWDCLLIEHDVIKQWELKMPEDDSYWCLESGRRKELGLPDN 120
Query: 121 FDEELFKAIDNVATMRENQSDTEPDSDPEAMVEMVDEIAEPGPKRHRRRSMSKRNQDLEK 180
FDEELFKAIDNVATMR NQSDTEPDSDPEA VE +DEIAEPGPKR RRRSMSK NQ LEK
Sbjct: 121 FDEELFKAIDNVATMRANQSDTEPDSDPEAAVENIDEIAEPGPKRQRRRSMSKSNQVLEK 180
Query: 181 SFKC------------------EDEEAEKKLPVLCL-EAQPRECYIKSYGEKATDNHEPE 240
S +C ED E E++ P+L E +PRECYIK+ G K TDN EP+
Sbjct: 181 SLECERNRALEKSLECKEEEEVEDGEEEEEKPLLSFPEVEPRECYIKNNGSKVTDNLEPK 240
Query: 241 EQMMVKKLLENAEKIQAIVSENAEYATSDEKNIDHRIDLVRCQGSKLIRCLGDFLNTIND 288
EQMM K LLENAEK+QAIVSENAEYATSDEKN + +LVR QGSKLIRCLGD LNTIND
Sbjct: 241 EQMMAKFLLENAEKVQAIVSENAEYATSDEKNDKDQTNLVRHQGSKLIRCLGDILNTIND 300
BLAST of Lcy12g016080 vs. NCBI nr
Match:
KAG6608224.1 (Trihelix transcription factor ASR3, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 447.2 bits (1149), Expect = 1.1e-121
Identity = 230/289 (79.58%), Postives = 249/289 (86.16%), Query Frame = 0
Query: 1 MKKENSNRGPGVSGSRRTRSQIAPDWTAADCLVLVNVIAAVEADCLKALSSYQKWKIVAE 60
MK+E+ RG VSGSRRTRS+IAPDWTAADCLVLVNVIAAVEADC KALSS+QKWKI+AE
Sbjct: 1 MKEEDGKRGTEVSGSRRTRSRIAPDWTAADCLVLVNVIAAVEADCWKALSSFQKWKIIAE 60
Query: 61 NCTSLDVARTSNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWCLESGRRKELGLPENFDE 120
NCTSLDVAR SNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWCLESGRRKELGLP+NFDE
Sbjct: 61 NCTSLDVARNSNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWCLESGRRKELGLPDNFDE 120
Query: 121 ELFKAIDNVATMRENQSDTEPDSDPEAMVEMVDEIAEPGPKRHRRRSMSKRNQDLEKSFK 180
E+FKAIDNV +MR NQSDTEPDSDPEA VE VDE AEPGPKR RR SMS RNQ LEKS
Sbjct: 121 EVFKAIDNVVSMRANQSDTEPDSDPEAAVEKVDEAAEPGPKRQRRCSMSTRNQSLEKSVN 180
Query: 181 CEDEEAEKKLPVLCLEAQPRECYIKSYGEKATDNHEPEEQMMVKKLLENAEKIQAIVSEN 240
CE+E+ E PV E + R CYIKS+GEKATD+ EPEEQ MVKKLLE AEK+QAIVSEN
Sbjct: 181 CEEEDEEP--PVSSPEVERRGCYIKSHGEKATDSTEPEEQTMVKKLLETAEKVQAIVSEN 240
Query: 241 AEYATSDEKNIDH--RIDLVRCQGSKLIRCLGDFLNTINDLRGLLEDHE 288
AEYATSDEKN ++ R + +R QGSKLI+CL DFLNTINDL LLED E
Sbjct: 241 AEYATSDEKNDNYNVRTNSIRRQGSKLIKCLEDFLNTINDLHSLLEDQE 287
BLAST of Lcy12g016080 vs. NCBI nr
Match:
KAG6608217.1 (Trihelix transcription factor ASR3, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 446.0 bits (1146), Expect = 2.4e-121
Identity = 230/290 (79.31%), Postives = 248/290 (85.52%), Query Frame = 0
Query: 1 MKKENSNRGPGVSGSRRTRSQIAPDWTAADCLVLVNVIAAVEADCLKALSSYQKWKIVAE 60
MK+E+ RG VSGSRRTRS+IAPDWTAADCLVLVNVIAAVEADC KALSS+QKWKI+AE
Sbjct: 1 MKEEDGKRGTEVSGSRRTRSRIAPDWTAADCLVLVNVIAAVEADCWKALSSFQKWKIIAE 60
Query: 61 NCTSLDVARTSNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWCLESGRRKELGLPENFDE 120
NCTSLDVAR SNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWCLESGRRKELGLP+NFDE
Sbjct: 61 NCTSLDVARNSNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWCLESGRRKELGLPDNFDE 120
Query: 121 ELFKAIDNVATMRENQSDTEPDSDPEAMVEMVDEIAEPGPKRHRRRSMSKRNQDLEKSFK 180
E+FKAIDNV +MR NQSDTEPDSDPEA VE VDE AEPGPKR RR SMS RNQ LEKS
Sbjct: 121 EVFKAIDNVVSMRANQSDTEPDSDPEAAVEKVDEAAEPGPKRQRRCSMSTRNQSLEKSVN 180
Query: 181 CEDEEAEKKLPVLCLEAQPRECYIKSYGEKATDNHEPEEQMMVKKLLENAEKIQAIVSEN 240
CE+E+ E PV E + R CYIKS+GEKATD+ EPEEQ MVKKLLE AEK+QAIVSEN
Sbjct: 181 CEEEDEEP--PVSSPEVERRGCYIKSHGEKATDSTEPEEQTMVKKLLETAEKVQAIVSEN 240
Query: 241 AEYATSDEKNIDH---RIDLVRCQGSKLIRCLGDFLNTINDLRGLLEDHE 288
AEYATSDEK D+ R + +R QGSKLI+CL DFLNTINDL LLED E
Sbjct: 241 AEYATSDEKKNDNYNVRTNSIRRQGSKLIKCLEDFLNTINDLHSLLEDQE 288
BLAST of Lcy12g016080 vs. NCBI nr
Match:
KAG7037576.1 (Trihelix transcription factor ASR3, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 445.7 bits (1145), Expect = 3.1e-121
Identity = 230/289 (79.58%), Postives = 249/289 (86.16%), Query Frame = 0
Query: 1 MKKENSNRGPGVSGSRRTRSQIAPDWTAADCLVLVNVIAAVEADCLKALSSYQKWKIVAE 60
MK+E+ RG VSGSRRTRS+IAPDWTAADCLVLVNVIAAVEADC KALSS+QKWKIVAE
Sbjct: 1 MKEEDGKRGTEVSGSRRTRSRIAPDWTAADCLVLVNVIAAVEADCWKALSSFQKWKIVAE 60
Query: 61 NCTSLDVARTSNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWCLESGRRKELGLPENFDE 120
NCTSLDVAR SNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWCLESGRRKELGLP+NFDE
Sbjct: 61 NCTSLDVARNSNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWCLESGRRKELGLPDNFDE 120
Query: 121 ELFKAIDNVATMRENQSDTEPDSDPEAMVEMVDEIAEPGPKRHRRRSMSKRNQDLEKSFK 180
E+FKAIDNV +MR NQSDTEPDSDPEA VE VDE AEPGPKR RR SMS RN+ LEKS K
Sbjct: 121 EVFKAIDNVVSMRANQSDTEPDSDPEAAVEKVDEAAEPGPKRQRRCSMSIRNRSLEKSVK 180
Query: 181 CEDEEAEKKLPVLCLEAQPRECYIKSYGEKATDNHEPEEQMMVKKLLENAEKIQAIVSEN 240
CE+E+ E PV E + R CYIKS+GEKATD+ EPEEQ M KKLLE AEK+QAIVSEN
Sbjct: 181 CEEEDEEP--PVSSPEVERRGCYIKSHGEKATDSTEPEEQTMAKKLLETAEKVQAIVSEN 240
Query: 241 AEYATSDEKNIDH--RIDLVRCQGSKLIRCLGDFLNTINDLRGLLEDHE 288
AEYATSDEKN ++ R + +R QGSKLI+CL DFLNTINDL LLED E
Sbjct: 241 AEYATSDEKNDNYNVRTNSIRRQGSKLIKCLEDFLNTINDLHSLLEDQE 287
BLAST of Lcy12g016080 vs. TAIR 10
Match:
AT4G31270.1 (sequence-specific DNA binding transcription factors )
HSP 1 Score: 200.7 bits (509), Expect = 1.6e-51
Identity = 121/291 (41.58%), Postives = 173/291 (59.45%), Query Frame = 0
Query: 11 GVSGSRRTRSQIAPDWTAADCLVLVNVIAAVEADCLKALSSYQKWKIVAENCTSLDVART 70
G SGSRRTRSQ+AP+W DCLVLVN IAAVEADC ALSS+QKW ++ ENC +LDV+R
Sbjct: 4 GTSGSRRTRSQVAPEWAVKDCLVLVNEIAAVEADCSNALSSFQKWTMITENCNALDVSRN 63
Query: 71 SNQCRRKWDCLLIEHDVIKQWELEMPDDD-SYWCLESGRRKELGLPENFDEELFKAIDNV 130
NQCRRKWD L+ +++ IK+WE + SYW L S +RK L LP + D ELF+AI+ V
Sbjct: 64 LNQCRRKWDSLMSDYNQIKKWESQYRGTGRSYWSLSSDKRKLLNLPGDIDIELFEAINAV 123
Query: 131 ATMRENQSDTEPDSDPEA--MVEMVDEIAEPGPKRHRRRSMSKRNQDLEKSFKCEDEEAE 190
+++ ++ TE DSDPEA +V++ E+A G KR R+R+M + E+ +
Sbjct: 124 VMIQDEKAGTESDSDPEAQDVVDLSAELAFVGSKRSRQRTMVMKETKKEEPRTSRVQVNT 183
Query: 191 KKLPVLCL---------EAQPRECYIKSYGEKATDNHEPEEQMMVKKLLENAEKIQAIVS 250
++ P+ E +P E E T N E + ++M KL + I AIV
Sbjct: 184 REKPITTKATHQNKTMGEKKPVEDMSTDEEEDETMNIEEDVEVMEAKLSYKIDLIHAIVG 243
Query: 251 EN--AEYATSDEKNIDHRIDLVRCQGSKLIRCLGDFLNTINDLRGLLEDHE 288
N + T D ++D ++ VR QG +LI CL + ++T+N L + ++ E
Sbjct: 244 RNLAKDNETKDGVSMDDKLKSVRQQGDELIGCLSEIVSTLNRLHEVPQEIE 294
BLAST of Lcy12g016080 vs. TAIR 10
Match:
AT2G35640.1 (Homeodomain-like superfamily protein )
HSP 1 Score: 50.1 bits (118), Expect = 3.5e-06
Identity = 32/124 (25.81%), Postives = 54/124 (43.55%), Query Frame = 0
Query: 25 DWTAADCLVLVNVIAAVEADCLKALSSYQK------------WKIVAENCTSLDVARTSN 84
+WT ++ LVL I A + D + + +K WK + E C R N
Sbjct: 21 NWTVSETLVL---IEAKKMDDQRRVRRSEKQPEGRNKPAELRWKWIEEYCWRRGCYRNQN 80
Query: 85 QCRRKWDCLLIEHDVIKQWELEMPD-------DDSYWCLESGRRKELGLPENFDEELFKA 130
QC KWD L+ ++ I+++E + SYW ++ RKE LP N +++
Sbjct: 81 QCNDKWDNLMRDYKKIREYERSRVESSFNTVTSSSYWKMDKTERKEKNLPSNMLPQIYDV 140
BLAST of Lcy12g016080 vs. TAIR 10
Match:
AT1G31310.1 (hydroxyproline-rich glycoprotein family protein )
HSP 1 Score: 49.3 bits (116), Expect = 6.0e-06
Identity = 26/103 (25.24%), Postives = 44/103 (42.72%), Query Frame = 0
Query: 54 KWKIVAENCTSLDVARTSNQCRRKWDCLLIEHDVIKQWELEMPDDD-------------- 113
+WK + + C R+ NQC KWD L+ ++ ++++E +
Sbjct: 63 RWKWIEDYCWRKGCMRSQNQCNDKWDNLMRDYKKVREYERRRVESSITAGESSSSSAPAG 122
Query: 114 ---SYWCLESGRRKELGLPENFDEELFKAIDNVATMRENQSDT 140
SYW +E RKE LP N + ++A+ V + S T
Sbjct: 123 ETASYWKMEKSERKERSLPSNMLPQTYQALFEVVESKTLPSST 165
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1CEU7 | 2.4e-127 | 82.99 | trihelix transcription factor ASR3 OS=Momordica charantia OX=3673 GN=LOC11101055... | [more] |
A0A6J1FMB3 | 2.0e-121 | 79.58 | trihelix transcription factor ASR3-like OS=Cucurbita moschata OX=3662 GN=LOC1114... | [more] |
A0A6J1IN02 | 5.7e-121 | 77.93 | trihelix transcription factor ASR3-like OS=Cucurbita maxima OX=3661 GN=LOC111476... | [more] |
A0A0A0LDW0 | 1.7e-120 | 76.53 | Myb-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G882960 PE... | [more] |
A0A6J1FEH7 | 2.8e-120 | 78.28 | trihelix transcription factor ASR3-like OS=Cucurbita moschata OX=3662 GN=LOC1114... | [more] |
Match Name | E-value | Identity | Description | |
XP_022139752.1 | 4.9e-127 | 82.99 | trihelix transcription factor ASR3 [Momordica charantia] >XP_022139827.1 triheli... | [more] |
XP_038897371.1 | 4.6e-125 | 78.96 | trihelix transcription factor ASR3 [Benincasa hispida] | [more] |
KAG6608224.1 | 1.1e-121 | 79.58 | Trihelix transcription factor ASR3, partial [Cucurbita argyrosperma subsp. soror... | [more] |
KAG6608217.1 | 2.4e-121 | 79.31 | Trihelix transcription factor ASR3, partial [Cucurbita argyrosperma subsp. soror... | [more] |
KAG7037576.1 | 3.1e-121 | 79.58 | Trihelix transcription factor ASR3, partial [Cucurbita argyrosperma subsp. argyr... | [more] |
Match Name | E-value | Identity | Description | |
AT4G31270.1 | 1.6e-51 | 41.58 | sequence-specific DNA binding transcription factors | [more] |
AT2G35640.1 | 3.5e-06 | 25.81 | Homeodomain-like superfamily protein | [more] |
AT1G31310.1 | 6.0e-06 | 25.24 | hydroxyproline-rich glycoprotein family protein | [more] |