Lcy12g014730 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy12g014730
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Aminoacyl-tRNA hydrolase
Location	Chr12: 42645204 .. 42648110 (+)
RNA-Seq Expression	Lcy12g014730
Synteny	Lcy12g014730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGAGCTTCAAGATTTCAGGCAAAAACACCCACAAGATAAGATTGAAATTGAAACAGCCGCGCTTTGCCCACTCTCTGTTTTTCTAAAAAGCTCATGTTGGGTTCTTCTAATTCTTCCAGAAAGGTATTCAATTTCATGGGTTGCTTTCTCTCTCCCTCTGTCCCTCTTCTCGATGATGTTAAAGCTTCATGGAAAATTGTTAACGTCGTGGATGTTGTTTGAATTAATTTATCGTTTTCTTTTCTGTGTTGTTAGAAGAAGCAAGTGAAGCCAGAAAAAGAATGGCTCTCAGTGAGTTTCAGACCCGAGAACTTCATACCAGGCCTCGTCATTGGTTTCATTCTTGGGTTGTTTTTGGATTTGTCAAAACCCAGTAAAGGCAATGTTAAGAAGGGTTATTTCCTGCCGTCCAAGTACCAACAGCTATCTCCAACCTCAAACGACGGCGATCAAGAGCTCAAATTGGTTAGTGTTCGTCTTTACCGGCTGGTTTATTTTAATTTTGCAGTTTGGTTTATTGTGACCTTTATCTGGAATTCTGTGGAGTTGGAAATGGTTTCTGTTCGTGATTGTGATGGATTATGATCACTAAAATAGAATGAAAGGGAAGAATGAAACGAGAATTTTTTAGTTTAGCCTCAACTGTGTTCGATAAAAGGGCATACAATAGTACTAGGGCTTTTAAAAATTAGCTTTCATATTGGGATGAGGTTTTCTGTTTAATGGCAATGAAAATGGTTCTCAATTGCTCAAATTTTGAGGCTTGAATTGCTTGTAAGACAGAAGAGTTTAGGGCCATGCTTGAGGTAGTTGTGTGATAATATTGGGAACAAAATTAGCTTTTGAGTGAACATGCCTATTTGCCACAACATTAAGTGATGAAGCAGAGTTTAGGTACGTTGCTTACACCATCTTTGCTCTTGCCCATCAAGTATCTACAGTCCGTCCTGCCAAGACGTGAAAAGGGAACCGATTAGTTGAGGATTAAAAGGGCCTACTGAAATATGATATATCAGTTTAGACGAGTAATCTTTGCTTTGCAACACTTAGTTATATGTATATTTCCAAATATGTTAAAATGTTGTATTATGGCTCGTTAGATTTTCCCCCATTAAGCGTTGAAGCACACTAGCAGTAACTGCCACACGAAGTCCTTGCATCGTGTAACTCGTATAATGTGTTTAGCTGTCGAGAAACATCTGACATTCTGACTTTTAATTGAAGGTCCTGGTTGTTAGGCAAGATCTGAAGATGGGTTCTGGAAAAATTGCATCTCAATGTGCTCGTAAGATTTAAGATGCTGCATTTCATATTTGTCATAGTGTGCATTTAATTCTAGTTTGATTGCTTTGGTCCATGTATCACTTCTCATGTCTTCCCGCCATCAATGCCAAATGTTTTTGCATGTTTTCTGTCAAATTATGAAGATGCTGCTACTGGCTTGTATGCAGAACTAATGCAAAGGTACTCCTTATACTATACTACTTCCGAATATCTGATTTGATCAAAGCATGTACTCAGCTAATTCTTCACCCGTCTCTCTTTTCTGCATCTATATCCATTTCTAATATCTAGTGCAGCCACCGAAACCTTTTGAGGCAGTGGGAGCTTTGTGGGCAGCCAAAAATAGTTGTAACATGCAAGAATCAACAAGAAATGTAAGCAGGTGATTCCTTTTTCTGAAAATGTAATCATCTAAGTGATAAACATGTGAAATCTTATGGTTTTTGAAAGACTTGTTGGCTTTTGTTGAGGATAGGGAGGAGGGGAAGAGAACGGTTGGGAAGGATTGTTTATTGAAGATACACTTTTGTTGTTAAATTTATTTCTTTTCTCAAATCAGGAACAAACTGAAGGATGCAGCTGAGACCATTGGCCTTCCTACTTTTGTTGTTGCTGATGCTGGACGCACACAGGTACAATCTTTGTCCTGTACTTACAAGCATTTTGATTAATGCATGAGAAATGATCGGGTAACCAGGGACGATAAATGCTTAACATGTTGAATTACTAATGTTTATGTTTTGGTACACGTAGCCGAATGATTTTTCACATGTTATGCGGGTCGGTATTATATTGTCCTATGAATGTGATGCATCAGCAAAATATGTTCAGCTCTCTGGAACCTGGTATCCTGAAATTGGTTCAATGATATGCAGGTTTCGGCTGGATCAAAGACCGTTCTTGCCATTGGACCCGGTAATTCTTCTTTACCCTGTGATAGAATTCTGTGGTTGCCTGGTTGATTTTCCTTATGTCACTCGTCATTCTTGTGTATATACCCTTGCACTCATGAGTTTGGAAATTAGCACTTGATCCAATGAATGATTCTCTCGATATAAATTGGAGATGAAATGACATTACTGGCATTTAAACACAACCTCTTGCTCTCACTGAATCTGAAAACTTAAGCGGATGAGTTATGGTAAATTTAATTATTTATTCATATTCTTAACAATATGCACGTTCCTCGACTCTTTTTTAAATAGGGCCAAAGGAGTCTGTTGATGCGGTAACGGGTAAACTTCGCCTACTCTAGTCGGGTTGGAATCAGGACAGACAGTCATACGCTTGATTTGATGCATTCAAGACGAAAATGATGAATCTGCGTCTTTCTCCTTTAGCATTCAATTTGTTGAGGTTACAAGAGGGGTTCGTGCACATGGTGGATAAGTTATAACGGCTGGTAAGAGAGAAGTGTTGTTTGTGGAGTATGGTTATGTCTGCAACATTGTTTAGTATTGTTATTAGTTGCTCTTAGTATGAGTGACATTTGAACTGACATGTTTAGGATGTAACCTTCGATCTTGAAGAATGTTTGTGACTTATTGACGTTTGTTTGGCCAAACAAATTTTTAAAACATTTGTACGGAGCTGTAGTTGGATGGCTGGTAAATTTTGGAGAT

mRNA sequence

TCGAGCTTCAAGATTTCAGGCAAAAACACCCACAAGATAAGATTGAAATTGAAACAGCCGCGCTTTGCCCACTCTCTGTTTTTCTAAAAAGCTCATGTTGGGTTCTTCTAATTCTTCCAGAAAGAAGAAGCAAGTGAAGCCAGAAAAAGAATGGCTCTCAGTGAGTTTCAGACCCGAGAACTTCATACCAGGCCTCGTCATTGGTTTCATTCTTGGGTTGTTTTTGGATTTGTCAAAACCCAGTAAAGGCAATGTTAAGAAGGGTTATTTCCTGCCGTCCAAGTACCAACAGCTATCTCCAACCTCAAACGACGGCGATCAAGAGCTCAAATTGGTCCTGGTTGTTAGGCAAGATCTGAAGATGGGTTCTGGAAAAATTGCATCTCAATGTGCTCATGCTGCTACTGGCTTGTATGCAGAACTAATGCAAAGCCACCGAAACCTTTTGAGGCAGTGGGAGCTTTGTGGGCAGCCAAAAATAGTTGTAACATGCAAGAATCAACAAGAAATGAACAAACTGAAGGATGCAGCTGAGACCATTGGCCTTCCTACTTTTGTTGTTGCTGATGCTGGACGCACACAGCCGAATGATTTTTCACATGTTATGCGGGTCGGTATTATATTGTCCTATGAATGTGATGCATCAGCAAAATATGTTCAGCTCTCTGGAACCTGGTATCCTGAAATTGGTTCAATGATATGCAGGTTTCGGCTGGATCAAAGACCGTTCTTGCCATTGGACCCGGGCCAAAGGAGTCTGTTGATGCGGTAACGGGTAAACTTCGCCTACTCTAGTCGGGTTGGAATCAGGACAGACAGTCATACGCTTGATTTGATGCATTCAAGACGAAAATGATGAATCTGCGTCTTTCTCCTTTAGCATTCAATTTGTTGAGGTTACAAGAGGGGTTCGTGCACATGGTGGATAAGTTATAACGGCTGGTAAGAGAGAAGTGTTGTTTGTGGAGTATGGTTATGTCTGCAACATTGTTTAGTATTGTTATTAGTTGCTCTTAGTATGAGTGACATTTGAACTGACATGTTTAGGATGTAACCTTCGATCTTGAAGAATGTTTGTGACTTATTGACGTTTGTTTGGCCAAACAAATTTTTAAAACATTTGTACGGAGCTGTAGTTGGATGGCTGGTAAATTTTGGAGAT

Coding sequence (CDS)

ATGTTGGGTTCTTCTAATTCTTCCAGAAAGAAGAAGCAAGTGAAGCCAGAAAAAGAATGGCTCTCAGTGAGTTTCAGACCCGAGAACTTCATACCAGGCCTCGTCATTGGTTTCATTCTTGGGTTGTTTTTGGATTTGTCAAAACCCAGTAAAGGCAATGTTAAGAAGGGTTATTTCCTGCCGTCCAAGTACCAACAGCTATCTCCAACCTCAAACGACGGCGATCAAGAGCTCAAATTGGTCCTGGTTGTTAGGCAAGATCTGAAGATGGGTTCTGGAAAAATTGCATCTCAATGTGCTCATGCTGCTACTGGCTTGTATGCAGAACTAATGCAAAGCCACCGAAACCTTTTGAGGCAGTGGGAGCTTTGTGGGCAGCCAAAAATAGTTGTAACATGCAAGAATCAACAAGAAATGAACAAACTGAAGGATGCAGCTGAGACCATTGGCCTTCCTACTTTTGTTGTTGCTGATGCTGGACGCACACAGCCGAATGATTTTTCACATGTTATGCGGGTCGGTATTATATTGTCCTATGAATGTGATGCATCAGCAAAATATGTTCAGCTCTCTGGAACCTGGTATCCTGAAATTGGTTCAATGATATGCAGGTTTCGGCTGGATCAAAGACCGTTCTTGCCATTGGACCCGGGCCAAAGGAGTCTGTTGATGCGGTAA

Protein sequence

MLGSSNSSRKKKQVKPEKEWLSVSFRPENFIPGLVIGFILGLFLDLSKPSKGNVKKGYFLPSKYQQLSPTSNDGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQWELCGQPKIVVTCKNQQEMNKLKDAAETIGLPTFVVADAGRTQPNDFSHVMRVGIILSYECDASAKYVQLSGTWYPEIGSMICRFRLDQRPFLPLDPGQRSLLMR

Homology

[Close]

BLAST of Lcy12g014730 vs. ExPASy Swiss-Prot
Match: Q9Y3E5 (Peptidyl-tRNA hydrolase 2, mitochondrial OS=Homo sapiens OX=9606 GN=PTRH2 PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 9.6e-20
Identity = 53/133 (39.85%), Postives = 78/133 (58.65%), Query Frame = 0


Query: 33  GLVIGFILGLFLDLS-KPSKGNVKKGYFLPSKYQQLSPTSNDGDQ-ELKLVLVVRQDLKM 92
           GL +G   G+ L  S +   G + K     +     S  S  GD  E K++LVVR DLKM
Sbjct: 18  GLAVGVACGMCLGWSLRVCFGMLPKSKTSKTHTDTESEASILGDSGEYKMILVVRNDLKM 77

Query: 93  GSGKIASQCAHAATGLYAELMQSHRNLLRQWELCGQPKIVVTCKNQQEMNKLKDAAETIG 152
           G GK+A+QC+HAA   Y ++ + +  +L+QWE CGQPK+VV   +++ +  L   A+ +G
Sbjct: 78  GKGKVAAQCSHAAVSAYKQIQRRNPEMLKQWEYCGQPKVVVKAPDEETLIALLAHAKMLG 137

Query: 153 LPTFVVADAGRTQ 164
           L   ++ DAGRTQ
Sbjct: 138 LTVSLIQDAGRTQ 150

[Close]

BLAST of Lcy12g014730 vs. ExPASy Swiss-Prot
Match: Q3ZBL5 (Peptidyl-tRNA hydrolase 2, mitochondrial OS=Bos taurus OX=9913 GN=PTRH2 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.6e-19
Identity = 41/87 (47.13%), Postives = 62/87 (71.26%), Query Frame = 0


Query: 77  ELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQWELCGQPKIVVTCKNQ 136
           E K++LVVR DLKMG GK+A+QC+HAA   Y ++ + +  LL++WE CGQPK+VV   ++
Sbjct: 64  EYKMILVVRNDLKMGKGKVAAQCSHAAVSAYKQIQRRNPELLKEWEYCGQPKVVVKAPDE 123

Query: 137 QEMNKLKDAAETIGLPTFVVADAGRTQ 164
           + + +L   A+ +GL   ++ DAGRTQ
Sbjct: 124 ETLVELLTHAKVLGLTVSLIQDAGRTQ 150

[Close]

BLAST of Lcy12g014730 vs. ExPASy Swiss-Prot
Match: Q8R2Y8 (Peptidyl-tRNA hydrolase 2, mitochondrial OS=Mus musculus OX=10090 GN=Ptrh2 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.8e-18
Identity = 41/87 (47.13%), Postives = 60/87 (68.97%), Query Frame = 0


Query: 77  ELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQWELCGQPKIVVTCKNQ 136
           E K++LVVR DLKMG GK+A+QC+HAA   Y +  +    +L++WE CGQPK+VV   ++
Sbjct: 66  EYKMILVVRTDLKMGKGKVAAQCSHAAVSAYKQTQRRSPQVLKEWEYCGQPKVVVKAPDE 125

Query: 137 QEMNKLKDAAETIGLPTFVVADAGRTQ 164
             + +L   A+T+GL   ++ DAGRTQ
Sbjct: 126 DTLIQLLTHAKTLGLTVSLIQDAGRTQ 152

[Close]

BLAST of Lcy12g014730 vs. ExPASy Swiss-Prot
Match: O97067 (Probable peptidyl-tRNA hydrolase 2 OS=Drosophila melanogaster OX=7227 GN=CG1307 PE=2 SV=2)

HSP 1 Score: 89.7 bits (221), Expect = 4.4e-17
Identity = 60/178 (33.71%), Postives = 88/178 (49.44%), Query Frame = 0


Query: 27  PENFIPGL--VIGFILGLFLDLSK-PSKGNVKKGYFLPSKYQQLSPTSNDG--------- 86
           P   I GL  ++ F +G    L +  +K +V +G   P   +    + ++          
Sbjct: 8   PTQIINGLAVMLSFFVGYRYALKRGDAKDSVTEGAATPFSQESSVSSGSEASVSDKGYGG 67

Query: 87  -DQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQWELCGQPKIVVTC 146
            +   K+VLVVR DLKMG GKIA+QC H A G Y   +     LLR WE CG  KI V  
Sbjct: 68  LNDNFKMVLVVRNDLKMGKGKIAAQCGHGAVGAYQRAVVRTPRLLRSWENCGCAKIAVRV 127

Query: 147 KNQQEMNKLKDAAETIGLPTFVVADAGRTQPNDFSH-VMRVGIILSYECDASAKYVQL 191
           +++ E+  +K  AE   L T ++ DAGRTQ    S  V+ VG   + + D    +++L
Sbjct: 128 ESEAELMAIKKEAERQQLNTCLIRDAGRTQIEANSKTVLAVGPAAAADIDRVTGHLKL 185

[Close]

BLAST of Lcy12g014730 vs. ExPASy Swiss-Prot
Match: O13830 (Probable peptidyl-tRNA hydrolase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC19A8.14 PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.4e-15
Identity = 57/167 (34.13%), Postives = 80/167 (47.90%), Query Frame = 0


Query: 23  VSFRPENFIPGLVIGFILGLFLDLSKPSKGNVKKGYFLPSKYQQLSP--TSNDGDQE--- 82
           +S  P   + G V+GF++G    ++  S+G   K     S  ++ SP   SND D E   
Sbjct: 10  ISSFPAAVLVGAVVGFMIGRKYSVADASRGYSSKNANKASNPEKESPVSVSNDEDSESET 69

Query: 83  ---------------------LKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRN 142
                                 K+VLVVR DL M  GKIA+QCAHAA   Y        +
Sbjct: 70  ELLDMLKGNSSLAALALAEGQTKMVLVVRTDLGMTKGKIAAQCAHAALACYKIASAVDPD 129

Query: 143 LLRQWELCGQPKIVVTCKNQQEMNKLKDAAETIGLPTFVVADAGRTQ 164
           L+R WE  GQ KI +  + ++ +  L+  A ++GL   V+ DAGRTQ
Sbjct: 130 LVRIWENAGQAKITLQAQTEETLELLQAQAMSLGLCARVIHDAGRTQ 176

[Close]

BLAST of Lcy12g014730 vs. ExPASy TrEMBL
Match: A0A5D3E5Y4 (Aminoacyl-tRNA hydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G005040 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 7.0e-82
Identity = 154/163 (94.48%), Postives = 158/163 (96.93%), Query Frame = 0


Query: 1   MLGSSNSSRKKKQVKPEKEWLSVSFRPENFIPGLVIGFILGLFLDLSKPSKGNVKKGYFL 60
           MLG+S SSRKK+QVKPEKEWLSVSF+PENFIPGLVIGFILGLFLDLSKPSKGN KKGYFL
Sbjct: 1   MLGASKSSRKKQQVKPEKEWLSVSFKPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFL 60

Query: 61  PSKYQQLSPTSNDGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQ 120
           PSKYQQLSP SN+GDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQ
Sbjct: 61  PSKYQQLSPASNNGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQ 120

Query: 121 WELCGQPKIVVTCKNQQEMNKLKDAAETIGLPTFVVADAGRTQ 164
           WELCGQPKIVVTCKNQ EMNKLKDAAE IGLPTFVVADAGRTQ
Sbjct: 121 WELCGQPKIVVTCKNQHEMNKLKDAAENIGLPTFVVADAGRTQ 163

[Close]

BLAST of Lcy12g014730 vs. ExPASy TrEMBL
Match: A0A1S3CRS9 (Aminoacyl-tRNA hydrolase OS=Cucumis melo OX=3656 GN=LOC103503602 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 7.0e-82
Identity = 154/163 (94.48%), Postives = 158/163 (96.93%), Query Frame = 0


Query: 1   MLGSSNSSRKKKQVKPEKEWLSVSFRPENFIPGLVIGFILGLFLDLSKPSKGNVKKGYFL 60
           MLG+S SSRKK+QVKPEKEWLSVSF+PENFIPGLVIGFILGLFLDLSKPSKGN KKGYFL
Sbjct: 1   MLGASKSSRKKQQVKPEKEWLSVSFKPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFL 60

Query: 61  PSKYQQLSPTSNDGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQ 120
           PSKYQQLSP SN+GDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQ
Sbjct: 61  PSKYQQLSPASNNGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQ 120

Query: 121 WELCGQPKIVVTCKNQQEMNKLKDAAETIGLPTFVVADAGRTQ 164
           WELCGQPKIVVTCKNQ EMNKLKDAAE IGLPTFVVADAGRTQ
Sbjct: 121 WELCGQPKIVVTCKNQHEMNKLKDAAENIGLPTFVVADAGRTQ 163

[Close]

BLAST of Lcy12g014730 vs. ExPASy TrEMBL
Match: A0A0A0LJW4 (Aminoacyl-tRNA hydrolase OS=Cucumis sativus OX=3659 GN=Csa_3G895670 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.6e-81
Identity = 153/163 (93.87%), Postives = 158/163 (96.93%), Query Frame = 0


Query: 1   MLGSSNSSRKKKQVKPEKEWLSVSFRPENFIPGLVIGFILGLFLDLSKPSKGNVKKGYFL 60
           MLG+S SSRKK+QVKPEKEWLSVSF+PENFIPGLVIGFILGLFLDLSKPSKGN KKGYFL
Sbjct: 1   MLGASKSSRKKQQVKPEKEWLSVSFKPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFL 60

Query: 61  PSKYQQLSPTSNDGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQ 120
           PSKYQQLSP SN+GDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQ
Sbjct: 61  PSKYQQLSPASNNGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQ 120

Query: 121 WELCGQPKIVVTCKNQQEMNKLKDAAETIGLPTFVVADAGRTQ 164
           WELCGQPKIVVTCKNQ EMNKLKD+AE IGLPTFVVADAGRTQ
Sbjct: 121 WELCGQPKIVVTCKNQHEMNKLKDSAENIGLPTFVVADAGRTQ 163

[Close]

BLAST of Lcy12g014730 vs. ExPASy TrEMBL
Match: A0A6J1ISX6 (Aminoacyl-tRNA hydrolase OS=Cucurbita maxima OX=3661 GN=LOC111480317 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 2.0e-81
Identity = 152/163 (93.25%), Postives = 157/163 (96.32%), Query Frame = 0


Query: 1   MLGSSNSSRKKKQVKPEKEWLSVSFRPENFIPGLVIGFILGLFLDLSKPSKGNVKKGYFL 60
           MLGSSNSSRKK+QVKPEKEWLSVSFRPENFIPGLVIGFI G  LDLSKPSKGN KKGYFL
Sbjct: 1   MLGSSNSSRKKQQVKPEKEWLSVSFRPENFIPGLVIGFIAGFLLDLSKPSKGNAKKGYFL 60

Query: 61  PSKYQQLSPTSNDGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQ 120
           PSKYQQ+SP SN+GDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYA+LMQSHRNLLRQ
Sbjct: 61  PSKYQQISPASNNGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAQLMQSHRNLLRQ 120

Query: 121 WELCGQPKIVVTCKNQQEMNKLKDAAETIGLPTFVVADAGRTQ 164
           WELCGQPKIVVTCKNQQEMNKLKDAAE +GLPTFVVADAGRTQ
Sbjct: 121 WELCGQPKIVVTCKNQQEMNKLKDAAENVGLPTFVVADAGRTQ 163

[Close]

BLAST of Lcy12g014730 vs. ExPASy TrEMBL
Match: A0A6J1DUJ1 (Aminoacyl-tRNA hydrolase OS=Momordica charantia OX=3673 GN=LOC111024134 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 2.0e-81
Identity = 153/163 (93.87%), Postives = 157/163 (96.32%), Query Frame = 0


Query: 1   MLGSSNSSRKKKQVKPEKEWLSVSFRPENFIPGLVIGFILGLFLDLSKPSKGNVKKGYFL 60
           ML SSNSSRKK+QVKPEKEWLSVSFRPENFIPGLVIGFI GLFLDLSKPSKGN K+GYFL
Sbjct: 1   MLKSSNSSRKKQQVKPEKEWLSVSFRPENFIPGLVIGFIFGLFLDLSKPSKGNAKRGYFL 60

Query: 61  PSKYQQLSPTSNDGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQ 120
           PSKYQQL+P SNDGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQ
Sbjct: 61  PSKYQQLTPASNDGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQ 120

Query: 121 WELCGQPKIVVTCKNQQEMNKLKDAAETIGLPTFVVADAGRTQ 164
           WELCGQPKIVVTCKNQ EMNKLKDAA+ IGLPTFVVADAGRTQ
Sbjct: 121 WELCGQPKIVVTCKNQHEMNKLKDAADNIGLPTFVVADAGRTQ 163

[Close]

BLAST of Lcy12g014730 vs. NCBI nr
Match: XP_008466065.1 (PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 313.5 bits (802), Expect = 1.4e-81
Identity = 154/163 (94.48%), Postives = 158/163 (96.93%), Query Frame = 0


Query: 1   MLGSSNSSRKKKQVKPEKEWLSVSFRPENFIPGLVIGFILGLFLDLSKPSKGNVKKGYFL 60
           MLG+S SSRKK+QVKPEKEWLSVSF+PENFIPGLVIGFILGLFLDLSKPSKGN KKGYFL
Sbjct: 1   MLGASKSSRKKQQVKPEKEWLSVSFKPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFL 60

Query: 61  PSKYQQLSPTSNDGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQ 120
           PSKYQQLSP SN+GDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQ
Sbjct: 61  PSKYQQLSPASNNGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQ 120

Query: 121 WELCGQPKIVVTCKNQQEMNKLKDAAETIGLPTFVVADAGRTQ 164
           WELCGQPKIVVTCKNQ EMNKLKDAAE IGLPTFVVADAGRTQ
Sbjct: 121 WELCGQPKIVVTCKNQHEMNKLKDAAENIGLPTFVVADAGRTQ 163

[Close]

BLAST of Lcy12g014730 vs. NCBI nr
Match: KAA0038619.1 (peptidyl-tRNA hydrolase 2 [Cucumis melo var. makuwa] >TYK31218.1 peptidyl-tRNA hydrolase 2 [Cucumis melo var. makuwa])

HSP 1 Score: 313.5 bits (802), Expect = 1.4e-81
Identity = 154/163 (94.48%), Postives = 158/163 (96.93%), Query Frame = 0


Query: 1   MLGSSNSSRKKKQVKPEKEWLSVSFRPENFIPGLVIGFILGLFLDLSKPSKGNVKKGYFL 60
           MLG+S SSRKK+QVKPEKEWLSVSF+PENFIPGLVIGFILGLFLDLSKPSKGN KKGYFL
Sbjct: 1   MLGASKSSRKKQQVKPEKEWLSVSFKPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFL 60

Query: 61  PSKYQQLSPTSNDGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQ 120
           PSKYQQLSP SN+GDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQ
Sbjct: 61  PSKYQQLSPASNNGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQ 120

Query: 121 WELCGQPKIVVTCKNQQEMNKLKDAAETIGLPTFVVADAGRTQ 164
           WELCGQPKIVVTCKNQ EMNKLKDAAE IGLPTFVVADAGRTQ
Sbjct: 121 WELCGQPKIVVTCKNQHEMNKLKDAAENIGLPTFVVADAGRTQ 163

[Close]

BLAST of Lcy12g014730 vs. NCBI nr
Match: XP_004136220.1 (peptidyl-tRNA hydrolase 2, mitochondrial isoform X1 [Cucumis sativus] >KGN60321.1 hypothetical protein Csa_002634 [Cucumis sativus])

HSP 1 Score: 312.4 bits (799), Expect = 3.2e-81
Identity = 153/163 (93.87%), Postives = 158/163 (96.93%), Query Frame = 0


Query: 1   MLGSSNSSRKKKQVKPEKEWLSVSFRPENFIPGLVIGFILGLFLDLSKPSKGNVKKGYFL 60
           MLG+S SSRKK+QVKPEKEWLSVSF+PENFIPGLVIGFILGLFLDLSKPSKGN KKGYFL
Sbjct: 1   MLGASKSSRKKQQVKPEKEWLSVSFKPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFL 60

Query: 61  PSKYQQLSPTSNDGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQ 120
           PSKYQQLSP SN+GDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQ
Sbjct: 61  PSKYQQLSPASNNGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQ 120

Query: 121 WELCGQPKIVVTCKNQQEMNKLKDAAETIGLPTFVVADAGRTQ 164
           WELCGQPKIVVTCKNQ EMNKLKD+AE IGLPTFVVADAGRTQ
Sbjct: 121 WELCGQPKIVVTCKNQHEMNKLKDSAENIGLPTFVVADAGRTQ 163

[Close]

BLAST of Lcy12g014730 vs. NCBI nr
Match: XP_022941498.1 (peptidyl-tRNA hydrolase 2, mitochondrial [Cucurbita moschata] >XP_022981057.1 peptidyl-tRNA hydrolase 2, mitochondrial [Cucurbita maxima] >XP_023523204.1 peptidyl-tRNA hydrolase 2, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo] >KAG6608093.1 Peptidyl-tRNA hydrolase 2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 312.0 bits (798), Expect = 4.2e-81
Identity = 152/163 (93.25%), Postives = 157/163 (96.32%), Query Frame = 0


Query: 1   MLGSSNSSRKKKQVKPEKEWLSVSFRPENFIPGLVIGFILGLFLDLSKPSKGNVKKGYFL 60
           MLGSSNSSRKK+QVKPEKEWLSVSFRPENFIPGLVIGFI G  LDLSKPSKGN KKGYFL
Sbjct: 1   MLGSSNSSRKKQQVKPEKEWLSVSFRPENFIPGLVIGFIAGFLLDLSKPSKGNAKKGYFL 60

Query: 61  PSKYQQLSPTSNDGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQ 120
           PSKYQQ+SP SN+GDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYA+LMQSHRNLLRQ
Sbjct: 61  PSKYQQISPASNNGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAQLMQSHRNLLRQ 120

Query: 121 WELCGQPKIVVTCKNQQEMNKLKDAAETIGLPTFVVADAGRTQ 164
           WELCGQPKIVVTCKNQQEMNKLKDAAE +GLPTFVVADAGRTQ
Sbjct: 121 WELCGQPKIVVTCKNQQEMNKLKDAAENVGLPTFVVADAGRTQ 163

[Close]

BLAST of Lcy12g014730 vs. NCBI nr
Match: XP_023523205.1 (peptidyl-tRNA hydrolase 2, mitochondrial isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 312.0 bits (798), Expect = 4.2e-81
Identity = 152/163 (93.25%), Postives = 157/163 (96.32%), Query Frame = 0


Query: 1   MLGSSNSSRKKKQVKPEKEWLSVSFRPENFIPGLVIGFILGLFLDLSKPSKGNVKKGYFL 60
           MLGSSNSSRKK+QVKPEKEWLSVSFRPENFIPGLVIGFI G  LDLSKPSKGN KKGYFL
Sbjct: 1   MLGSSNSSRKKQQVKPEKEWLSVSFRPENFIPGLVIGFIAGFLLDLSKPSKGNAKKGYFL 60

Query: 61  PSKYQQLSPTSNDGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQ 120
           PSKYQQ+SP SN+GDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYA+LMQSHRNLLRQ
Sbjct: 61  PSKYQQISPASNNGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAQLMQSHRNLLRQ 120

Query: 121 WELCGQPKIVVTCKNQQEMNKLKDAAETIGLPTFVVADAGRTQ 164
           WELCGQPKIVVTCKNQQEMNKLKDAAE +GLPTFVVADAGRTQ
Sbjct: 121 WELCGQPKIVVTCKNQQEMNKLKDAAENVGLPTFVVADAGRTQ 163

[Close]

BLAST of Lcy12g014730 vs. TAIR 10
Match: AT4G32900.2 (Peptidyl-tRNA hydrolase II (PTH2) family protein )

HSP 1 Score: 208.0 bits (528), Expect = 8.0e-54
Identity = 108/164 (65.85%), Postives = 131/164 (79.88%), Query Frame = 0


Query: 1   MLGSSNSSRKKKQVKPEKEWLSVSFRPENFIPGLVIGFILGLFLDLSKPSKGNVKKGYFL 60
           M  SS +S + + ++ EK+ +SVSFR EN IPG+VIGFI+G+ LDLS+     VK+   L
Sbjct: 1   MWPSSRNSSQPQAMRQEKKSISVSFRAENLIPGVVIGFIIGMILDLSQQVTSPVKRSRLL 60

Query: 61  PSKYQQLSPTSNDG-DQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLR 120
            SK Q+ S    +G DQELK+VLVVRQDLKM +GKIASQCAHAATG+YAELMQS R LLR
Sbjct: 61  SSKVQKQSSVPGNGKDQELKMVLVVRQDLKMRTGKIASQCAHAATGMYAELMQSDRYLLR 120

Query: 121 QWELCGQPKIVVTCKNQQEMNKLKDAAETIGLPTFVVADAGRTQ 164
           +WE  GQPKIVVTCKNQQEMNK+ +AAE++GLPTFVVADAGRT+
Sbjct: 121 RWEENGQPKIVVTCKNQQEMNKITEAAESVGLPTFVVADAGRTE 164

[Close]

BLAST of Lcy12g014730 vs. TAIR 10
Match: AT4G32900.1 (Peptidyl-tRNA hydrolase II (PTH2) family protein )

HSP 1 Score: 169.1 bits (427), Expect = 4.1e-42
Identity = 90/140 (64.29%), Postives = 108/140 (77.14%), Query Frame = 0


Query: 1   MLGSSNSSRKKKQVKPEKEWLSVSFRPENFIPGLVIGFILGLFLDLSKPSKGNVKKGYFL 60
           M  SS +S + + ++ EK+ +SVSFR EN IPG+VIGFI+G+ LDLS+     VK+   L
Sbjct: 1   MWPSSRNSSQPQAMRQEKKSISVSFRAENLIPGVVIGFIIGMILDLSQQVTSPVKRSRLL 60

Query: 61  PSKYQQLSPTSNDG-DQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLR 120
            SK Q+ S    +G DQELK+VLVVRQDLKM +GKIASQCAHAATG+YAELMQS R LLR
Sbjct: 61  SSKVQKQSSVPGNGKDQELKMVLVVRQDLKMRTGKIASQCAHAATGMYAELMQSDRYLLR 120

Query: 121 QWELCGQPKIVVTCKNQQEM 140
           +WE  GQPKIVVTCKNQQEM
Sbjct: 121 RWEENGQPKIVVTCKNQQEM 140

[Close]

BLAST of Lcy12g014730 vs. TAIR 10
Match: AT3G03010.1 (Peptidyl-tRNA hydrolase II (PTH2) family protein )

HSP 1 Score: 105.5 bits (262), Expect = 5.6e-23
Identity = 53/114 (46.49%), Postives = 75/114 (65.79%), Query Frame = 0


Query: 50  SKGNVKKGYFLPSKYQQLSPTSNDGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAE 109
           S GN K     P + ++L+    D  +  K+VLVVR DLKMG GKIA+QC+HA  GLY +
Sbjct: 42  SSGNKKTKSKEPLEIEKLA----DFRKNFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKK 101

Query: 110 LMQSHRNLLRQWELCGQPKIVVTCKNQQEMNKLKDAAETIGLPTFVVADAGRTQ 164
           L+Q     L +WE C QPK+VV  ++++EM  L++ A+T+ LPT +  DAG+TQ
Sbjct: 102 LLQRAPKALNRWEYCAQPKVVVKIESEEEMLVLQERAKTLKLPTHITIDAGKTQ 151

[Close]

BLAST of Lcy12g014730 vs. TAIR 10
Match: AT3G03010.2 (Peptidyl-tRNA hydrolase II (PTH2) family protein )

HSP 1 Score: 105.5 bits (262), Expect = 5.6e-23
Identity = 53/114 (46.49%), Postives = 75/114 (65.79%), Query Frame = 0


Query: 50  SKGNVKKGYFLPSKYQQLSPTSNDGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAE 109
           S GN K     P + ++L+    D  +  K+VLVVR DLKMG GKIA+QC+HA  GLY +
Sbjct: 42  SSGNKKTKSKEPLEIEKLA----DFRKNFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKK 101

Query: 110 LMQSHRNLLRQWELCGQPKIVVTCKNQQEMNKLKDAAETIGLPTFVVADAGRTQ 164
           L+Q     L +WE C QPK+VV  ++++EM  L++ A+T+ LPT +  DAG+TQ
Sbjct: 102 LLQRAPKALNRWEYCAQPKVVVKIESEEEMLVLQERAKTLKLPTHITIDAGKTQ 151

[Close]

BLAST of Lcy12g014730 vs. TAIR 10
Match: AT5G16870.1 (Peptidyl-tRNA hydrolase II (PTH2) family protein )

HSP 1 Score: 100.9 bits (250), Expect = 1.4e-21
Identity = 60/145 (41.38%), Postives = 81/145 (55.86%), Query Frame = 0


Query: 20  WLSVSFRPENFIPGLVIGFILGLFLDLSKPSKGNVKKGYFLPSKYQQLS-PTSNDGDQEL 79
           WLS        I G  +G+ +G     SKP    V K     S    L      D   + 
Sbjct: 5   WLSA------LIVGAALGYCIG--TRRSKPVVAAVDKDIKTQSSKSPLEIEKLADILDDF 64

Query: 80  KLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQWELCGQPKIVVTCKNQQE 139
           K+VLVVR DLKMG GKIA+QC+HA  GLY +L++     L  WE C QPK+VV  +++ E
Sbjct: 65  KMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLVRRAPKALDCWEECAQPKVVVKIEDEDE 124

Query: 140 MNKLKDAAETIGLPTFVVADAGRTQ 164
           M +L++ A+++ LPT +  DAGRTQ
Sbjct: 125 MLELQERAKSLKLPTHITIDAGRTQ 141

The following BLAST results are available for this feature:

BLAST of Lcy12g014730 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9Y3E5	9.6e-20	39.85	Peptidyl-tRNA hydrolase 2, mitochondrial OS=Homo sapiens OX=9606 GN=PTRH2 PE=1 S...	[more]
Q3ZBL5	3.6e-19	47.13	Peptidyl-tRNA hydrolase 2, mitochondrial OS=Bos taurus OX=9913 GN=PTRH2 PE=2 SV=...	[more]
Q8R2Y8	1.8e-18	47.13	Peptidyl-tRNA hydrolase 2, mitochondrial OS=Mus musculus OX=10090 GN=Ptrh2 PE=1 ...	[more]
O97067	4.4e-17	33.71	Probable peptidyl-tRNA hydrolase 2 OS=Drosophila melanogaster OX=7227 GN=CG1307 ...	[more]
O13830	1.4e-15	34.13	Probable peptidyl-tRNA hydrolase 2 OS=Schizosaccharomyces pombe (strain 972 / AT...	[more]

BLAST of Lcy12g014730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E5Y4	7.0e-82	94.48	Aminoacyl-tRNA hydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CRS9	7.0e-82	94.48	Aminoacyl-tRNA hydrolase OS=Cucumis melo OX=3656 GN=LOC103503602 PE=4 SV=1	[more]
A0A0A0LJW4	1.6e-81	93.87	Aminoacyl-tRNA hydrolase OS=Cucumis sativus OX=3659 GN=Csa_3G895670 PE=4 SV=1	[more]
A0A6J1ISX6	2.0e-81	93.25	Aminoacyl-tRNA hydrolase OS=Cucurbita maxima OX=3661 GN=LOC111480317 PE=4 SV=1	[more]
A0A6J1DUJ1	2.0e-81	93.87	Aminoacyl-tRNA hydrolase OS=Momordica charantia OX=3673 GN=LOC111024134 PE=4 SV=...	[more]

BLAST of Lcy12g014730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466065.1	1.4e-81	94.48	PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial isoform X2 [Cucumis melo]	[more]
KAA0038619.1	1.4e-81	94.48	peptidyl-tRNA hydrolase 2 [Cucumis melo var. makuwa] >TYK31218.1 peptidyl-tRNA h...	[more]
XP_004136220.1	3.2e-81	93.87	peptidyl-tRNA hydrolase 2, mitochondrial isoform X1 [Cucumis sativus] >KGN60321....	[more]
XP_022941498.1	4.2e-81	93.25	peptidyl-tRNA hydrolase 2, mitochondrial [Cucurbita moschata] >XP_022981057.1 pe...	[more]
XP_023523205.1	4.2e-81	93.25	peptidyl-tRNA hydrolase 2, mitochondrial isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lcy12g014730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32900.2	8.0e-54	65.85	Peptidyl-tRNA hydrolase II (PTH2) family protein	[more]
AT4G32900.1	4.1e-42	64.29	Peptidyl-tRNA hydrolase II (PTH2) family protein	[more]
AT3G03010.1	5.6e-23	46.49	Peptidyl-tRNA hydrolase II (PTH2) family protein	[more]
AT3G03010.2	5.6e-23	46.49	Peptidyl-tRNA hydrolase II (PTH2) family protein	[more]
AT5G16870.1	1.4e-21	41.38	Peptidyl-tRNA hydrolase II (PTH2) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023476	Peptidyl-tRNA hydrolase II domain superfamily	GENE3D	3.40.1490.10	Bit1	coord: 73..188 e-value: 1.5E-36 score: 126.9
IPR023476	Peptidyl-tRNA hydrolase II domain superfamily	SUPERFAMILY	102462	Peptidyl-tRNA hydrolase II	coord: 77..166
IPR002833	Peptidyl-tRNA hydrolase, PTH2	PFAM	PF01981	PTH2	coord: 78..165 e-value: 6.7E-30 score: 103.8
IPR002833	Peptidyl-tRNA hydrolase, PTH2	TIGRFAM	TIGR00283	TIGR00283	coord: 78..163 e-value: 2.8E-25 score: 86.8
IPR002833	Peptidyl-tRNA hydrolase, PTH2	PANTHER	PTHR12649	PEPTIDYL-TRNA HYDROLASE 2	coord: 5..163
None	No IPR available	PANTHER	PTHR12649:SF11	PEPTIDYL-TRNA HYDROLASE 2, MITOCHONDRIAL	coord: 5..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy12g014730.1	Lcy12g014730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0004045	aminoacyl-tRNA hydrolase activity