Lcy12g013620 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy12g013620
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	AP-4 complex subunit epsilon
Location	Chr12: 41636366 .. 41637243 (+)
RNA-Seq Expression	Lcy12g013620
Synteny	Lcy12g013620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCAGTTGAAGACGATCGGCAGAGAGCTTGCCATGGGGTCTCAGGGAGGGTTTGGACAGTCAAAGGAGTTTCTGGATCTGATTAAATCGATCGGCGAGGCCAGATCCAAGGCCGAAGAGGAGCGAATTATCATCCACGAGATGGAAACTTTGAAACGTCGTCTCACCGATCCCGACATTCCCAAGCGTAAGATGAAGGAGTACATTATTCGTCTTGTGTATGTTGAGATGCTCGGTCACGATGCCTCATTCGGCTACATCCATGCCGTCAAGATGACTCATGACGACAATCTCCTGCTGAAGCGCACTGGTTATTTGGCCGTCACACTCTTTCTTAACGAGGACCACGACCTCATTATCCTCATTGTCAATACCATCCAGAAAGACCTCAAGTCTGACAATTATCTCGTCGTCTGTGCGGCTCTCAATGCGGTTTGTAGGCTTATTAATGAGGAAACTATACCAGCAGTGTTACCGCAGGTCGTCGAGCTTTTGGGACATTCAAAGGAGGCCGTTAGAAAGAAGGCTATCATGGCTCTTCATCGCTTCCATCAGAAATCACCCTCTTCCGTATCGCATCTCATCTCCAATTTCCGGAAGGTGGGGTTCAAAATTTGATACCTGGTTGTTGGTTTTTATGCACTTAAGTGCCGTGAGAAGTTAGCTCTTTTTTTTGGATGCAGAGGCTGTGTGATAACGATCCTGGAGTCATGGGAGCCACGCTTTGCCCTCTTTTTGATCTCATTACCACGGATGTAAATTCCTATAAAGATCTAGTTGTCAGCTTTGTAAGCATTCTTAAACAAGTAGCTGAGCGCAGATTACCGAAGAGTTACGATTACCATCAGATGCCGGCTCCATTCATACAGGTCTGA

mRNA sequence

ATGGAGCAGTTGAAGACGATCGGCAGAGAGCTTGCCATGGGGTCTCAGGGAGGGTTTGGACAGTCAAAGGAGTTTCTGGATCTGATTAAATCGATCGGCGAGGCCAGATCCAAGGCCGAAGAGGAGCGAATTATCATCCACGAGATGGAAACTTTGAAACGTCGTCTCACCGATCCCGACATTCCCAAGCGTAAGATGAAGGAGTACATTATTCGTCTTGTGTATGTTGAGATGCTCGGTCACGATGCCTCATTCGGCTACATCCATGCCGTCAAGATGACTCATGACGACAATCTCCTGCTGAAGCGCACTGGTTATTTGGCCGTCACACTCTTTCTTAACGAGGACCACGACCTCATTATCCTCATTGTCAATACCATCCAGAAAGACCTCAAGTCTGACAATTATCTCGTCGTCTGTGCGGCTCTCAATGCGGTTTGTAGGCTTATTAATGAGGAAACTATACCAGCAGTGTTACCGCAGGTCGTCGAGCTTTTGGGACATTCAAAGGAGGCCGTTAGAAAGAAGGCTATCATGGCTCTTCATCGCTTCCATCAGAAATCACCCTCTTCCGTATCGCATCTCATCTCCAATTTCCGGAAGAGGCTGTGTGATAACGATCCTGGAGTCATGGGAGCCACGCTTTGCCCTCTTTTTGATCTCATTACCACGGATGTAAATTCCTATAAAGATCTAGTTGTCAGCTTTGTAAGCATTCTTAAACAAGTAGCTGAGCGCAGATTACCGAAGAGTTACGATTACCATCAGATGCCGGCTCCATTCATACAGGTCTGA

Coding sequence (CDS)

ATGGAGCAGTTGAAGACGATCGGCAGAGAGCTTGCCATGGGGTCTCAGGGAGGGTTTGGACAGTCAAAGGAGTTTCTGGATCTGATTAAATCGATCGGCGAGGCCAGATCCAAGGCCGAAGAGGAGCGAATTATCATCCACGAGATGGAAACTTTGAAACGTCGTCTCACCGATCCCGACATTCCCAAGCGTAAGATGAAGGAGTACATTATTCGTCTTGTGTATGTTGAGATGCTCGGTCACGATGCCTCATTCGGCTACATCCATGCCGTCAAGATGACTCATGACGACAATCTCCTGCTGAAGCGCACTGGTTATTTGGCCGTCACACTCTTTCTTAACGAGGACCACGACCTCATTATCCTCATTGTCAATACCATCCAGAAAGACCTCAAGTCTGACAATTATCTCGTCGTCTGTGCGGCTCTCAATGCGGTTTGTAGGCTTATTAATGAGGAAACTATACCAGCAGTGTTACCGCAGGTCGTCGAGCTTTTGGGACATTCAAAGGAGGCCGTTAGAAAGAAGGCTATCATGGCTCTTCATCGCTTCCATCAGAAATCACCCTCTTCCGTATCGCATCTCATCTCCAATTTCCGGAAGAGGCTGTGTGATAACGATCCTGGAGTCATGGGAGCCACGCTTTGCCCTCTTTTTGATCTCATTACCACGGATGTAAATTCCTATAAAGATCTAGTTGTCAGCTTTGTAAGCATTCTTAAACAAGTAGCTGAGCGCAGATTACCGAAGAGTTACGATTACCATCAGATGCCGGCTCCATTCATACAGGTCTGA

Protein sequence

MEQLKTIGRELAMGSQGGFGQSKEFLDLIKSIGEARSKAEEERIIIHEMETLKRRLTDPDIPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLIILIVNTIQKDLKSDNYLVVCAALNAVCRLINEETIPAVLPQVVELLGHSKEAVRKKAIMALHRFHQKSPSSVSHLISNFRKRLCDNDPGVMGATLCPLFDLITTDVNSYKDLVVSFVSILKQVAERRLPKSYDYHQMPAPFIQV

Homology

[Close]

BLAST of Lcy12g013620 vs. ExPASy Swiss-Prot
Match: Q8L7A9 (AP-4 complex subunit epsilon OS=Arabidopsis thaliana OX=3702 GN=At1g31730 PE=1 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 1.6e-135
Identity = 241/264 (91.29%), Postives = 256/264 (96.97%), Query Frame = 0


Query: 1   MEQLKTIGRELAMGSQGGFGQSKEFLDLIKSIGEARSKAEEERIIIHEMETLKRRLTDPD 60
           MEQLKTIGRELAMGSQGGFGQSKEFLDL+KSIGEARSKAEE+RI++ E++ LKRRL +PD
Sbjct: 1   MEQLKTIGRELAMGSQGGFGQSKEFLDLVKSIGEARSKAEEDRIVLSEVDILKRRLLEPD 60

Query: 61  IPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLI 120
           IPKRKMKEYIIRLVY+EMLGHDASFGYI+AVKMTHDDNLLLKRTGYLAVTLFLNEDHDLI
Sbjct: 61  IPKRKMKEYIIRLVYIEMLGHDASFGYIYAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLI 120

Query: 121 ILIVNTIQKDLKSDNYLVVCAALNAVCRLINEETIPAVLPQVVELLGHSKEAVRKKAIMA 180
           ILIVNTIQKDL+SDNYLVVCAALNA+CRLINEETIPAVLPQVVELL H KEAVRKKAIMA
Sbjct: 121 ILIVNTIQKDLRSDNYLVVCAALNAICRLINEETIPAVLPQVVELLNHQKEAVRKKAIMA 180

Query: 181 LHRFHQKSPSSVSHLISNFRKRLCDNDPGVMGATLCPLFDLITTDVNSYKDLVVSFVSIL 240
           LHRFH+KSPSSVSHL+SNFRKRLCDNDPGVMGATLCPLFDLI+ DVNSYKDLV SFVSIL
Sbjct: 181 LHRFHRKSPSSVSHLVSNFRKRLCDNDPGVMGATLCPLFDLISEDVNSYKDLVSSFVSIL 240

Query: 241 KQVAERRLPKSYDYHQMPAPFIQV 265
           KQV ERRLPKSYDYHQMPAPFIQ+
Sbjct: 241 KQVTERRLPKSYDYHQMPAPFIQI 264

[Close]

BLAST of Lcy12g013620 vs. ExPASy Swiss-Prot
Match: Q80V94 (AP-4 complex subunit epsilon-1 OS=Mus musculus OX=10090 GN=Ap4e1 PE=1 SV=3)

HSP 1 Score: 233.8 bits (595), Expect = 2.2e-60
Identity = 116/237 (48.95%), Postives = 166/237 (70.04%), Query Frame = 0


Query: 28  LIKSIGEARSKAEEERIIIHEMETLKRRLTDPDIPKRKMKEYIIRLVYVEMLGHDASFGY 87
           LI+ +    SK EEE++I  E+ +LK  ++ P    + MKE ++RL+Y EMLG+DASFGY
Sbjct: 38  LIRGVTALSSKHEEEKLIQQELSSLKATVSAPTTTLKTMKECMVRLIYCEMLGYDASFGY 97

Query: 88  IHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLIILIVNTIQKDLKSDNYLVVCAALNAVC 147
           IHA+K+    NLL KR GYLAV+LFL+E H+L++L+VNT+ KDL+S N + VC AL  V 
Sbjct: 98  IHAIKLAQQGNLLEKRVGYLAVSLFLHESHELLLLLVNTVVKDLQSTNLVEVCMALTVVS 157

Query: 148 RLINEETIPAVLPQVVELLGHSKEAVRKKAIMALHRFHQKSPSSVSHLISNFRKRLCDND 207
           ++   E IPAVLP + + L HSKE +R+KA++AL++F+  +P+ V H+ + FRK LCD D
Sbjct: 158 QIFPREMIPAVLPLIEDKLQHSKEIIRRKAVLALYKFYLIAPNQVQHIHTKFRKALCDRD 217

Query: 208 PGVMGATLCPLFDLITTDVNSYKDLVVSFVSILKQVAERRLPKSYDYHQMPAPFIQV 265
            GVM A+L     +I  + + YKDL  SFV+ILKQV   +LP  + YH +PAP++Q+
Sbjct: 218 VGVMAASLHIYLRMIKENASGYKDLTESFVTILKQVVGGKLPVEFSYHSVPAPWLQI 274

[Close]

BLAST of Lcy12g013620 vs. ExPASy Swiss-Prot
Match: Q9UPM8 (AP-4 complex subunit epsilon-1 OS=Homo sapiens OX=9606 GN=AP4E1 PE=1 SV=2)

HSP 1 Score: 233.0 bits (593), Expect = 3.8e-60
Identity = 118/237 (49.79%), Postives = 166/237 (70.04%), Query Frame = 0


Query: 28  LIKSIGEARSKAEEERIIIHEMETLKRRLTDPDIPKRKMKEYIIRLVYVEMLGHDASFGY 87
           L++ I    SK EEE++I  E+ +LK  ++ P    + MKE ++RL+Y EMLG+DASFGY
Sbjct: 39  LVRGITALTSKHEEEKLIQQELSSLKATVSAPTTTLKMMKECMVRLIYCEMLGYDASFGY 98

Query: 88  IHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLIILIVNTIQKDLKSDNYLVVCAALNAVC 147
           IHA+K+    NLL KR GYLAV+LFL+E H+L++L+VNT+ KDL+S N + VC AL  V 
Sbjct: 99  IHAIKLAQQGNLLEKRVGYLAVSLFLHESHELLLLLVNTVVKDLQSTNLVEVCMALTVVS 158

Query: 148 RLINEETIPAVLPQVVELLGHSKEAVRKKAIMALHRFHQKSPSSVSHLISNFRKRLCDND 207
           ++   E IPAVLP + + L HSKE VR+KA++AL++FH  +P+ V H+   FRK LCD D
Sbjct: 159 QIFPCEMIPAVLPLIEDKLQHSKEIVRRKAVLALYKFHLIAPNQVQHIHIKFRKALCDRD 218

Query: 208 PGVMGATLCPLFDLITTDVNSYKDLVVSFVSILKQVAERRLPKSYDYHQMPAPFIQV 265
            GVM A+L     +I  + + YKDL  SFV+ILKQV   +LP  ++YH +PAP++Q+
Sbjct: 219 VGVMAASLHIYLRMIKENSSGYKDLTGSFVTILKQVVGGKLPVEFNYHSVPAPWLQI 275

[Close]

BLAST of Lcy12g013620 vs. ExPASy Swiss-Prot
Match: Q54VE0 (AP-4 complex subunit epsilon OS=Dictyostelium discoideum OX=44689 GN=ap4e1 PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 3.0e-49
Identity = 115/280 (41.07%), Postives = 162/280 (57.86%), Query Frame = 0


Query: 24  EFLDLIKSIGEARSKAEEERIIIHEMETLKRRLTDPDIPKRKMKEYIIRLVYVEMLGHDA 83
           +F DL+K+IGE+ S+ EE  II +E+  LK   +  +  K K +E +IR++Y  MLG+D 
Sbjct: 33  DFYDLVKNIGESTSREEEVHIIQNEIIKLKSCFS-KEQSKDKKRECLIRMIYCHMLGYDV 92

Query: 84  SFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLIILIVNTIQKDLKSDNYLVVCAAL 143
            FG+I A+ MT D  +L KRTGYL ++L L E H+L+I+ VN+I K L S NYL VC+AL
Sbjct: 93  PFGHIQALNMTQDSEILNKRTGYLTLSLCLPERHELLIMAVNSILKGLNSSNYLEVCSAL 152

Query: 144 NAVCRLINEETIPAVLPQVVELLGHSKEAVRKKAIMALHRFHQKSPSSV---SHLISNFR 203
            A+C+LI+ +TIPA L +V++LL H K  VRKK++  LHRF++    S      +I   R
Sbjct: 153 TAMCKLIDNDTIPAFLQKVLQLLNHQKPIVRKKSVTVLHRFYRLVGDSFLDDDQIIDKLR 212

Query: 204 KRLCDNDPGVMGATLCPLFDLITTD----------------------------------- 263
           + LCD DP VM A++C   D+                                       
Sbjct: 213 QSLCDRDPSVMSASICIFLDISEKHSTLKDNNNQINNNNNNNNSNQIKKKNNEEINRSKN 272

Query: 264 -VNSYKDLVVSFVSILKQVAERRLPKSYDYHQMPAPFIQV 265
            ++  K+LV SFV ILKQVAE RLP SY YH +  P++Q+
Sbjct: 273 LISMLKELVPSFVGILKQVAEGRLPNSYIYHGIHHPWLQI 311

[Close]

BLAST of Lcy12g013620 vs. ExPASy Swiss-Prot
Match: Q8LPL6 (AP-2 complex subunit alpha-1 OS=Arabidopsis thaliana OX=3702 GN=ALPHA-ADR PE=1 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.2e-21
Identity = 62/205 (30.24%), Postives = 113/205 (55.12%), Query Frame = 0


Query: 65  KMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLIILIV 124
           K K+Y+ +++Y+ MLG+D  FG++ AV +        K+ GY+  +  LNE+HD + L +
Sbjct: 48  KKKKYVWKMLYIHMLGYDVDFGHMEAVSLISAPKYPEKQVGYIVTSCLLNENHDFLKLAI 107

Query: 125 NTIQKDLKSDNYLVVCAALNAVCRLINEETIPAVLPQVVELLGHS--KEAVRKKAIMALH 184
           NT++ D+   N    C AL  V  +   +   ++ P V +LL  S  +  VRKKA + L 
Sbjct: 108 NTVRNDIIGRNETFQCLALTLVGNIGGRDFAESLAPDVQKLLISSSCRPLVRKKAALCLL 167

Query: 185 RFHQKSPSSVS--HLISNFRKRLCDNDPGVMGATLCPLFDLITTDVNSYKDLVVSFVSIL 244
           R  +K+P +V+         + L + D GV+ ++   L  L++ +  +Y   +   V IL
Sbjct: 168 RLFRKNPDAVNVDGWADRMAQLLDERDLGVLTSSTSLLVALVSNNHEAYSSCLPKCVKIL 227

Query: 245 KQVAERR-LPKSYDYHQMPAPFIQV 265
           +++A  + +P+ Y Y+ +P+P++QV
Sbjct: 228 ERLARNQDVPQEYTYYGIPSPWLQV 252

[Close]

BLAST of Lcy12g013620 vs. ExPASy TrEMBL
Match: A0A6J1CVS5 (AP-4 complex subunit epsilon OS=Momordica charantia OX=3673 GN=LOC111014709 PE=3 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 1.4e-142
Identity = 261/264 (98.86%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 1   MEQLKTIGRELAMGSQGGFGQSKEFLDLIKSIGEARSKAEEERIIIHEMETLKRRLTDPD 60
           MEQLKTIGRELAMGSQGGFGQSKEFLDLIKSIGEARSKAEEERII+HEMETLKRRLTDPD
Sbjct: 1   MEQLKTIGRELAMGSQGGFGQSKEFLDLIKSIGEARSKAEEERIIVHEMETLKRRLTDPD 60

Query: 61  IPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLI 120
           IPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLI
Sbjct: 61  IPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLI 120

Query: 121 ILIVNTIQKDLKSDNYLVVCAALNAVCRLINEETIPAVLPQVVELLGHSKEAVRKKAIMA 180
           ILIVNTIQKDLKSDNYLVVCAALNAVCRLINEETIPAVLPQ+VELLGHSKEAVRKKAIMA
Sbjct: 121 ILIVNTIQKDLKSDNYLVVCAALNAVCRLINEETIPAVLPQIVELLGHSKEAVRKKAIMA 180

Query: 181 LHRFHQKSPSSVSHLISNFRKRLCDNDPGVMGATLCPLFDLITTDVNSYKDLVVSFVSIL 240
           LHRFHQKSPSSVSHLISNFRKRLCDNDPGVMGATLCPLFDLITTDVNSYKDLVVSFVSIL
Sbjct: 181 LHRFHQKSPSSVSHLISNFRKRLCDNDPGVMGATLCPLFDLITTDVNSYKDLVVSFVSIL 240

Query: 241 KQVAERRLPKSYDYHQMPAPFIQV 265
           KQVAERRLPKSYDYHQMPAPFIQ+
Sbjct: 241 KQVAERRLPKSYDYHQMPAPFIQI 264

[Close]

BLAST of Lcy12g013620 vs. ExPASy TrEMBL
Match: A0A5D3BUP2 (AP-4 complex subunit epsilon OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00420 PE=3 SV=1)

HSP 1 Score: 512.7 bits (1319), Expect = 9.2e-142
Identity = 259/264 (98.11%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 1   MEQLKTIGRELAMGSQGGFGQSKEFLDLIKSIGEARSKAEEERIIIHEMETLKRRLTDPD 60
           MEQLKTIGRELAMGSQGGFGQSKEFLDLIKSIGEARSKAEEERIIIHEMETLKRRLTDPD
Sbjct: 1   MEQLKTIGRELAMGSQGGFGQSKEFLDLIKSIGEARSKAEEERIIIHEMETLKRRLTDPD 60

Query: 61  IPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLI 120
           IPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLI
Sbjct: 61  IPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLI 120

Query: 121 ILIVNTIQKDLKSDNYLVVCAALNAVCRLINEETIPAVLPQVVELLGHSKEAVRKKAIMA 180
           ILIVNTIQKDLKSDNYL+VCAALNAVCRLINEETIPAVLPQVVELLGHSKEAVRKKAIMA
Sbjct: 121 ILIVNTIQKDLKSDNYLIVCAALNAVCRLINEETIPAVLPQVVELLGHSKEAVRKKAIMA 180

Query: 181 LHRFHQKSPSSVSHLISNFRKRLCDNDPGVMGATLCPLFDLITTDVNSYKDLVVSFVSIL 240
           LHRFHQKSPSS+SHL+SNFRKRLCDNDPGVMGATLCPLFDLITTDV+SYKDLVVSFVSIL
Sbjct: 181 LHRFHQKSPSSISHLLSNFRKRLCDNDPGVMGATLCPLFDLITTDVHSYKDLVVSFVSIL 240

Query: 241 KQVAERRLPKSYDYHQMPAPFIQV 265
           KQVAERRLPKSYDYHQMPAPFIQ+
Sbjct: 241 KQVAERRLPKSYDYHQMPAPFIQI 264

[Close]

BLAST of Lcy12g013620 vs. ExPASy TrEMBL
Match: A0A1S3B9W4 (AP-4 complex subunit epsilon OS=Cucumis melo OX=3656 GN=LOC103487626 PE=3 SV=1)

HSP 1 Score: 512.7 bits (1319), Expect = 9.2e-142
Identity = 259/264 (98.11%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 1   MEQLKTIGRELAMGSQGGFGQSKEFLDLIKSIGEARSKAEEERIIIHEMETLKRRLTDPD 60
           MEQLKTIGRELAMGSQGGFGQSKEFLDLIKSIGEARSKAEEERIIIHEMETLKRRLTDPD
Sbjct: 1   MEQLKTIGRELAMGSQGGFGQSKEFLDLIKSIGEARSKAEEERIIIHEMETLKRRLTDPD 60

Query: 61  IPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLI 120
           IPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLI
Sbjct: 61  IPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLI 120

Query: 121 ILIVNTIQKDLKSDNYLVVCAALNAVCRLINEETIPAVLPQVVELLGHSKEAVRKKAIMA 180
           ILIVNTIQKDLKSDNYL+VCAALNAVCRLINEETIPAVLPQVVELLGHSKEAVRKKAIMA
Sbjct: 121 ILIVNTIQKDLKSDNYLIVCAALNAVCRLINEETIPAVLPQVVELLGHSKEAVRKKAIMA 180

Query: 181 LHRFHQKSPSSVSHLISNFRKRLCDNDPGVMGATLCPLFDLITTDVNSYKDLVVSFVSIL 240
           LHRFHQKSPSS+SHL+SNFRKRLCDNDPGVMGATLCPLFDLITTDV+SYKDLVVSFVSIL
Sbjct: 181 LHRFHQKSPSSISHLLSNFRKRLCDNDPGVMGATLCPLFDLITTDVHSYKDLVVSFVSIL 240

Query: 241 KQVAERRLPKSYDYHQMPAPFIQV 265
           KQVAERRLPKSYDYHQMPAPFIQ+
Sbjct: 241 KQVAERRLPKSYDYHQMPAPFIQI 264

[Close]

BLAST of Lcy12g013620 vs. ExPASy TrEMBL
Match: A0A0A0KWY0 (AP-4 complex subunit epsilon OS=Cucumis sativus OX=3659 GN=Csa_4G252910 PE=3 SV=1)

HSP 1 Score: 511.5 bits (1316), Expect = 2.1e-141
Identity = 258/264 (97.73%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 1   MEQLKTIGRELAMGSQGGFGQSKEFLDLIKSIGEARSKAEEERIIIHEMETLKRRLTDPD 60
           MEQLKTIGRELAMGSQGGFGQSKEFLDLIKSIGEARSKAEEERIIIHEMETLKRRLTDPD
Sbjct: 1   MEQLKTIGRELAMGSQGGFGQSKEFLDLIKSIGEARSKAEEERIIIHEMETLKRRLTDPD 60

Query: 61  IPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLI 120
           IPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLI
Sbjct: 61  IPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLI 120

Query: 121 ILIVNTIQKDLKSDNYLVVCAALNAVCRLINEETIPAVLPQVVELLGHSKEAVRKKAIMA 180
           ILIVNTIQKDLKSDNYL+VCAALNAVCRLINEETIPAVLPQVVELLGHSKEAVRKKAIMA
Sbjct: 121 ILIVNTIQKDLKSDNYLIVCAALNAVCRLINEETIPAVLPQVVELLGHSKEAVRKKAIMA 180

Query: 181 LHRFHQKSPSSVSHLISNFRKRLCDNDPGVMGATLCPLFDLITTDVNSYKDLVVSFVSIL 240
           LHRFHQKSPSS+SHL+SNFRKRLCDNDPGVMGATLCPLFDLIT+DVNS+KDLVVSFVSIL
Sbjct: 181 LHRFHQKSPSSISHLLSNFRKRLCDNDPGVMGATLCPLFDLITSDVNSFKDLVVSFVSIL 240

Query: 241 KQVAERRLPKSYDYHQMPAPFIQV 265
           KQVAERRLPKSYDYHQMPAPFIQ+
Sbjct: 241 KQVAERRLPKSYDYHQMPAPFIQI 264

[Close]

BLAST of Lcy12g013620 vs. ExPASy TrEMBL
Match: A0A6J1F8Z0 (AP-4 complex subunit epsilon OS=Cucurbita moschata OX=3662 GN=LOC111443200 PE=3 SV=1)

HSP 1 Score: 506.5 bits (1303), Expect = 6.6e-140
Identity = 256/264 (96.97%), Postives = 262/264 (99.24%), Query Frame = 0


Query: 1   MEQLKTIGRELAMGSQGGFGQSKEFLDLIKSIGEARSKAEEERIIIHEMETLKRRLTDPD 60
           MEQLKTIGRELAMGSQGGFGQSKEFLDLIKSIGEARSKAEEERIII EME LKRRLTDPD
Sbjct: 1   MEQLKTIGRELAMGSQGGFGQSKEFLDLIKSIGEARSKAEEERIIIQEMENLKRRLTDPD 60

Query: 61  IPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLI 120
           IPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLI
Sbjct: 61  IPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLI 120

Query: 121 ILIVNTIQKDLKSDNYLVVCAALNAVCRLINEETIPAVLPQVVELLGHSKEAVRKKAIMA 180
           ILIVNTIQKDLKSDNYL+VCAALNAVCRLINEETIPAVLPQVVELLGHSKEAVRKKAIMA
Sbjct: 121 ILIVNTIQKDLKSDNYLIVCAALNAVCRLINEETIPAVLPQVVELLGHSKEAVRKKAIMA 180

Query: 181 LHRFHQKSPSSVSHLISNFRKRLCDNDPGVMGATLCPLFDLITTDVNSYKDLVVSFVSIL 240
           LHRFHQKSPSS+SHL+SNFRKRLCDNDPGVMGATLCPLFDLITTDV+SYKDLVVSFVSIL
Sbjct: 181 LHRFHQKSPSSISHLLSNFRKRLCDNDPGVMGATLCPLFDLITTDVHSYKDLVVSFVSIL 240

Query: 241 KQVAERRLPKSYDYHQMPAPFIQV 265
           KQVA+RRLPKSYDYHQMPAPFIQ+
Sbjct: 241 KQVADRRLPKSYDYHQMPAPFIQI 264

[Close]

BLAST of Lcy12g013620 vs. NCBI nr
Match: XP_022145241.1 (AP-4 complex subunit epsilon [Momordica charantia])

HSP 1 Score: 515.4 bits (1326), Expect = 2.9e-142
Identity = 261/264 (98.86%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 1   MEQLKTIGRELAMGSQGGFGQSKEFLDLIKSIGEARSKAEEERIIIHEMETLKRRLTDPD 60
           MEQLKTIGRELAMGSQGGFGQSKEFLDLIKSIGEARSKAEEERII+HEMETLKRRLTDPD
Sbjct: 1   MEQLKTIGRELAMGSQGGFGQSKEFLDLIKSIGEARSKAEEERIIVHEMETLKRRLTDPD 60

Query: 61  IPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLI 120
           IPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLI
Sbjct: 61  IPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLI 120

Query: 121 ILIVNTIQKDLKSDNYLVVCAALNAVCRLINEETIPAVLPQVVELLGHSKEAVRKKAIMA 180
           ILIVNTIQKDLKSDNYLVVCAALNAVCRLINEETIPAVLPQ+VELLGHSKEAVRKKAIMA
Sbjct: 121 ILIVNTIQKDLKSDNYLVVCAALNAVCRLINEETIPAVLPQIVELLGHSKEAVRKKAIMA 180

Query: 181 LHRFHQKSPSSVSHLISNFRKRLCDNDPGVMGATLCPLFDLITTDVNSYKDLVVSFVSIL 240
           LHRFHQKSPSSVSHLISNFRKRLCDNDPGVMGATLCPLFDLITTDVNSYKDLVVSFVSIL
Sbjct: 181 LHRFHQKSPSSVSHLISNFRKRLCDNDPGVMGATLCPLFDLITTDVNSYKDLVVSFVSIL 240

Query: 241 KQVAERRLPKSYDYHQMPAPFIQV 265
           KQVAERRLPKSYDYHQMPAPFIQ+
Sbjct: 241 KQVAERRLPKSYDYHQMPAPFIQI 264

[Close]

BLAST of Lcy12g013620 vs. NCBI nr
Match: XP_038896947.1 (AP-4 complex subunit epsilon [Benincasa hispida])

HSP 1 Score: 513.5 bits (1321), Expect = 1.1e-141
Identity = 260/264 (98.48%), Postives = 263/264 (99.62%), Query Frame = 0


Query: 1   MEQLKTIGRELAMGSQGGFGQSKEFLDLIKSIGEARSKAEEERIIIHEMETLKRRLTDPD 60
           MEQLKTIGRELAMGSQGGFGQSKEFLDLIKSIGEARSKAEEERIIIHEMETLKRRLTDPD
Sbjct: 1   MEQLKTIGRELAMGSQGGFGQSKEFLDLIKSIGEARSKAEEERIIIHEMETLKRRLTDPD 60

Query: 61  IPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLI 120
           IPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLI
Sbjct: 61  IPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLI 120

Query: 121 ILIVNTIQKDLKSDNYLVVCAALNAVCRLINEETIPAVLPQVVELLGHSKEAVRKKAIMA 180
           ILIVNTIQKDLKSDNYL+VCAALNAVCRLINEETIPAVLPQVVELLGHSKEAVRKKAIMA
Sbjct: 121 ILIVNTIQKDLKSDNYLIVCAALNAVCRLINEETIPAVLPQVVELLGHSKEAVRKKAIMA 180

Query: 181 LHRFHQKSPSSVSHLISNFRKRLCDNDPGVMGATLCPLFDLITTDVNSYKDLVVSFVSIL 240
           LHRFHQKSPSSVSHL+SNFRKRLCDNDPGVMGATLCP FDLITTDVNSYKDLVVSFVSIL
Sbjct: 181 LHRFHQKSPSSVSHLLSNFRKRLCDNDPGVMGATLCPFFDLITTDVNSYKDLVVSFVSIL 240

Query: 241 KQVAERRLPKSYDYHQMPAPFIQV 265
           KQVAERRLPKSYDYHQMPAPFIQ+
Sbjct: 241 KQVAERRLPKSYDYHQMPAPFIQI 264

[Close]

BLAST of Lcy12g013620 vs. NCBI nr
Match: XP_008444236.1 (PREDICTED: AP-4 complex subunit epsilon [Cucumis melo] >KAA0052245.1 AP-4 complex subunit epsilon [Cucumis melo var. makuwa] >TYK01809.1 AP-4 complex subunit epsilon [Cucumis melo var. makuwa])

HSP 1 Score: 512.7 bits (1319), Expect = 1.9e-141
Identity = 259/264 (98.11%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 1   MEQLKTIGRELAMGSQGGFGQSKEFLDLIKSIGEARSKAEEERIIIHEMETLKRRLTDPD 60
           MEQLKTIGRELAMGSQGGFGQSKEFLDLIKSIGEARSKAEEERIIIHEMETLKRRLTDPD
Sbjct: 1   MEQLKTIGRELAMGSQGGFGQSKEFLDLIKSIGEARSKAEEERIIIHEMETLKRRLTDPD 60

Query: 61  IPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLI 120
           IPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLI
Sbjct: 61  IPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLI 120

Query: 121 ILIVNTIQKDLKSDNYLVVCAALNAVCRLINEETIPAVLPQVVELLGHSKEAVRKKAIMA 180
           ILIVNTIQKDLKSDNYL+VCAALNAVCRLINEETIPAVLPQVVELLGHSKEAVRKKAIMA
Sbjct: 121 ILIVNTIQKDLKSDNYLIVCAALNAVCRLINEETIPAVLPQVVELLGHSKEAVRKKAIMA 180

Query: 181 LHRFHQKSPSSVSHLISNFRKRLCDNDPGVMGATLCPLFDLITTDVNSYKDLVVSFVSIL 240
           LHRFHQKSPSS+SHL+SNFRKRLCDNDPGVMGATLCPLFDLITTDV+SYKDLVVSFVSIL
Sbjct: 181 LHRFHQKSPSSISHLLSNFRKRLCDNDPGVMGATLCPLFDLITTDVHSYKDLVVSFVSIL 240

Query: 241 KQVAERRLPKSYDYHQMPAPFIQV 265
           KQVAERRLPKSYDYHQMPAPFIQ+
Sbjct: 241 KQVAERRLPKSYDYHQMPAPFIQI 264

[Close]

BLAST of Lcy12g013620 vs. NCBI nr
Match: XP_031739909.1 (LOW QUALITY PROTEIN: AP-4 complex subunit epsilon [Cucumis sativus])

HSP 1 Score: 511.5 bits (1316), Expect = 4.2e-141
Identity = 258/264 (97.73%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 1   MEQLKTIGRELAMGSQGGFGQSKEFLDLIKSIGEARSKAEEERIIIHEMETLKRRLTDPD 60
           MEQLKTIGRELAMGSQGGFGQSKEFLDLIKSIGEARSKAEEERIIIHEMETLKRRLTDPD
Sbjct: 1   MEQLKTIGRELAMGSQGGFGQSKEFLDLIKSIGEARSKAEEERIIIHEMETLKRRLTDPD 60

Query: 61  IPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLI 120
           IPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLI
Sbjct: 61  IPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLI 120

Query: 121 ILIVNTIQKDLKSDNYLVVCAALNAVCRLINEETIPAVLPQVVELLGHSKEAVRKKAIMA 180
           ILIVNTIQKDLKSDNYL+VCAALNAVCRLINEETIPAVLPQVVELLGHSKEAVRKKAIMA
Sbjct: 121 ILIVNTIQKDLKSDNYLIVCAALNAVCRLINEETIPAVLPQVVELLGHSKEAVRKKAIMA 180

Query: 181 LHRFHQKSPSSVSHLISNFRKRLCDNDPGVMGATLCPLFDLITTDVNSYKDLVVSFVSIL 240
           LHRFHQKSPSS+SHL+SNFRKRLCDNDPGVMGATLCPLFDLIT+DVNS+KDLVVSFVSIL
Sbjct: 181 LHRFHQKSPSSISHLLSNFRKRLCDNDPGVMGATLCPLFDLITSDVNSFKDLVVSFVSIL 240

Query: 241 KQVAERRLPKSYDYHQMPAPFIQV 265
           KQVAERRLPKSYDYHQMPAPFIQ+
Sbjct: 241 KQVAERRLPKSYDYHQMPAPFIQI 264

[Close]

BLAST of Lcy12g013620 vs. NCBI nr
Match: KGN54006.2 (hypothetical protein Csa_011850 [Cucumis sativus])

HSP 1 Score: 510.0 bits (1312), Expect = 1.2e-140
Identity = 258/263 (98.10%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 1   MEQLKTIGRELAMGSQGGFGQSKEFLDLIKSIGEARSKAEEERIIIHEMETLKRRLTDPD 60
           MEQLKTIGRELAMGSQGGFGQSKEFLDLIKSIGEARSKAEEERIIIHEMETLKRRLTDPD
Sbjct: 1   MEQLKTIGRELAMGSQGGFGQSKEFLDLIKSIGEARSKAEEERIIIHEMETLKRRLTDPD 60

Query: 61  IPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLI 120
           IPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLI
Sbjct: 61  IPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLI 120

Query: 121 ILIVNTIQKDLKSDNYLVVCAALNAVCRLINEETIPAVLPQVVELLGHSKEAVRKKAIMA 180
           ILIVNTIQKDLKSDNYL+VCAALNAVCRLINEETIPAVLPQVVELLGHSKEAVRKKAIMA
Sbjct: 121 ILIVNTIQKDLKSDNYLIVCAALNAVCRLINEETIPAVLPQVVELLGHSKEAVRKKAIMA 180

Query: 181 LHRFHQKSPSSVSHLISNFRKRLCDNDPGVMGATLCPLFDLITTDVNSYKDLVVSFVSIL 240
           LHRFHQKSPSS+SHL+SNFRKRLCDNDPGVMGATLCPLFDLIT+DVNS+KDLVVSFVSIL
Sbjct: 181 LHRFHQKSPSSISHLLSNFRKRLCDNDPGVMGATLCPLFDLITSDVNSFKDLVVSFVSIL 240

Query: 241 KQVAERRLPKSYDYHQMPAPFIQ 264
           KQVAERRLPKSYDYHQMPAPFIQ
Sbjct: 241 KQVAERRLPKSYDYHQMPAPFIQ 263

[Close]

BLAST of Lcy12g013620 vs. TAIR 10
Match: AT1G31730.1 (Adaptin family protein )

HSP 1 Score: 483.4 bits (1243), Expect = 1.2e-136
Identity = 241/264 (91.29%), Postives = 256/264 (96.97%), Query Frame = 0


Query: 1   MEQLKTIGRELAMGSQGGFGQSKEFLDLIKSIGEARSKAEEERIIIHEMETLKRRLTDPD 60
           MEQLKTIGRELAMGSQGGFGQSKEFLDL+KSIGEARSKAEE+RI++ E++ LKRRL +PD
Sbjct: 1   MEQLKTIGRELAMGSQGGFGQSKEFLDLVKSIGEARSKAEEDRIVLSEVDILKRRLLEPD 60

Query: 61  IPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLI 120
           IPKRKMKEYIIRLVY+EMLGHDASFGYI+AVKMTHDDNLLLKRTGYLAVTLFLNEDHDLI
Sbjct: 61  IPKRKMKEYIIRLVYIEMLGHDASFGYIYAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLI 120

Query: 121 ILIVNTIQKDLKSDNYLVVCAALNAVCRLINEETIPAVLPQVVELLGHSKEAVRKKAIMA 180
           ILIVNTIQKDL+SDNYLVVCAALNA+CRLINEETIPAVLPQVVELL H KEAVRKKAIMA
Sbjct: 121 ILIVNTIQKDLRSDNYLVVCAALNAICRLINEETIPAVLPQVVELLNHQKEAVRKKAIMA 180

Query: 181 LHRFHQKSPSSVSHLISNFRKRLCDNDPGVMGATLCPLFDLITTDVNSYKDLVVSFVSIL 240
           LHRFH+KSPSSVSHL+SNFRKRLCDNDPGVMGATLCPLFDLI+ DVNSYKDLV SFVSIL
Sbjct: 181 LHRFHRKSPSSVSHLVSNFRKRLCDNDPGVMGATLCPLFDLISEDVNSYKDLVSSFVSIL 240

Query: 241 KQVAERRLPKSYDYHQMPAPFIQV 265
           KQV ERRLPKSYDYHQMPAPFIQ+
Sbjct: 241 KQVTERRLPKSYDYHQMPAPFIQI 264

[Close]

BLAST of Lcy12g013620 vs. TAIR 10
Match: AT5G22780.1 (Adaptor protein complex AP-2, alpha subunit )

HSP 1 Score: 105.1 bits (261), Expect = 8.5e-23
Identity = 62/205 (30.24%), Postives = 113/205 (55.12%), Query Frame = 0


Query: 65  KMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLIILIV 124
           K K+Y+ +++Y+ MLG+D  FG++ AV +        K+ GY+  +  LNE+HD + L +
Sbjct: 48  KKKKYVWKMLYIHMLGYDVDFGHMEAVSLISAPKYPEKQVGYIVTSCLLNENHDFLKLAI 107

Query: 125 NTIQKDLKSDNYLVVCAALNAVCRLINEETIPAVLPQVVELLGHS--KEAVRKKAIMALH 184
           NT++ D+   N    C AL  V  +   +   ++ P V +LL  S  +  VRKKA + L 
Sbjct: 108 NTVRNDIIGRNETFQCLALTLVGNIGGRDFAESLAPDVQKLLISSSCRPLVRKKAALCLL 167

Query: 185 RFHQKSPSSVS--HLISNFRKRLCDNDPGVMGATLCPLFDLITTDVNSYKDLVVSFVSIL 244
           R  +K+P +V+         + L + D GV+ ++   L  L++ +  +Y   +   V IL
Sbjct: 168 RLFRKNPDAVNVDGWADRMAQLLDERDLGVLTSSTSLLVALVSNNHEAYSSCLPKCVKIL 227

Query: 245 KQVAERR-LPKSYDYHQMPAPFIQV 265
           +++A  + +P+ Y Y+ +P+P++QV
Sbjct: 228 ERLARNQDVPQEYTYYGIPSPWLQV 252

[Close]

BLAST of Lcy12g013620 vs. TAIR 10
Match: AT5G22770.1 (alpha-adaptin )

HSP 1 Score: 105.1 bits (261), Expect = 8.5e-23
Identity = 62/205 (30.24%), Postives = 113/205 (55.12%), Query Frame = 0


Query: 65  KMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLIILIV 124
           K K+Y+ +++Y+ MLG+D  FG++ AV +        K+ GY+  +  LNE+HD + L +
Sbjct: 48  KKKKYVWKMLYIHMLGYDVDFGHMEAVSLISAPKYPEKQVGYIVTSCLLNENHDFLKLAI 107

Query: 125 NTIQKDLKSDNYLVVCAALNAVCRLINEETIPAVLPQVVELLGHS--KEAVRKKAIMALH 184
           NT++ D+   N    C AL  V  +   +   ++ P V +LL  S  +  VRKKA + L 
Sbjct: 108 NTVRNDIIGRNETFQCLALTLVGNIGGRDFAESLAPDVQKLLISSSCRPLVRKKAALCLL 167

Query: 185 RFHQKSPSSVS--HLISNFRKRLCDNDPGVMGATLCPLFDLITTDVNSYKDLVVSFVSIL 244
           R  +K+P +V+         + L + D GV+ ++   L  L++ +  +Y   +   V IL
Sbjct: 168 RLFRKNPDAVNVDGWADRMAQLLDERDLGVLTSSTSLLVALVSNNHEAYSSCLPKCVKIL 227

Query: 245 KQVAERR-LPKSYDYHQMPAPFIQV 265
           +++A  + +P+ Y Y+ +P+P++QV
Sbjct: 228 ERLARNQDVPQEYTYYGIPSPWLQV 252

[Close]

BLAST of Lcy12g013620 vs. TAIR 10
Match: AT5G22770.3 (alpha-adaptin )

HSP 1 Score: 105.1 bits (261), Expect = 8.5e-23
Identity = 62/205 (30.24%), Postives = 113/205 (55.12%), Query Frame = 0


Query: 65  KMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLIILIV 124
           K K+Y+ +++Y+ MLG+D  FG++ AV +        K+ GY+  +  LNE+HD + L +
Sbjct: 48  KKKKYVWKMLYIHMLGYDVDFGHMEAVSLISAPKYPEKQVGYIVTSCLLNENHDFLKLAI 107

Query: 125 NTIQKDLKSDNYLVVCAALNAVCRLINEETIPAVLPQVVELLGHS--KEAVRKKAIMALH 184
           NT++ D+   N    C AL  V  +   +   ++ P V +LL  S  +  VRKKA + L 
Sbjct: 108 NTVRNDIIGRNETFQCLALTLVGNIGGRDFAESLAPDVQKLLISSSCRPLVRKKAALCLL 167

Query: 185 RFHQKSPSSVS--HLISNFRKRLCDNDPGVMGATLCPLFDLITTDVNSYKDLVVSFVSIL 244
           R  +K+P +V+         + L + D GV+ ++   L  L++ +  +Y   +   V IL
Sbjct: 168 RLFRKNPDAVNVDGWADRMAQLLDERDLGVLTSSTSLLVALVSNNHEAYSSCLPKCVKIL 227

Query: 245 KQVAERR-LPKSYDYHQMPAPFIQV 265
           +++A  + +P+ Y Y+ +P+P++QV
Sbjct: 228 ERLARNQDVPQEYTYYGIPSPWLQV 252

[Close]

BLAST of Lcy12g013620 vs. TAIR 10
Match: AT5G22770.2 (alpha-adaptin )

HSP 1 Score: 105.1 bits (261), Expect = 8.5e-23
Identity = 62/205 (30.24%), Postives = 113/205 (55.12%), Query Frame = 0


Query: 65  KMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLIILIV 124
           K K+Y+ +++Y+ MLG+D  FG++ AV +        K+ GY+  +  LNE+HD + L +
Sbjct: 48  KKKKYVWKMLYIHMLGYDVDFGHMEAVSLISAPKYPEKQVGYIVTSCLLNENHDFLKLAI 107

Query: 125 NTIQKDLKSDNYLVVCAALNAVCRLINEETIPAVLPQVVELLGHS--KEAVRKKAIMALH 184
           NT++ D+   N    C AL  V  +   +   ++ P V +LL  S  +  VRKKA + L 
Sbjct: 108 NTVRNDIIGRNETFQCLALTLVGNIGGRDFAESLAPDVQKLLISSSCRPLVRKKAALCLL 167

Query: 185 RFHQKSPSSVS--HLISNFRKRLCDNDPGVMGATLCPLFDLITTDVNSYKDLVVSFVSIL 244
           R  +K+P +V+         + L + D GV+ ++   L  L++ +  +Y   +   V IL
Sbjct: 168 RLFRKNPDAVNVDGWADRMAQLLDERDLGVLTSSTSLLVALVSNNHEAYSSCLPKCVKIL 227

Query: 245 KQVAERR-LPKSYDYHQMPAPFIQV 265
           +++A  + +P+ Y Y+ +P+P++QV
Sbjct: 228 ERLARNQDVPQEYTYYGIPSPWLQV 252

The following BLAST results are available for this feature:

BLAST of Lcy12g013620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L7A9	1.6e-135	91.29	AP-4 complex subunit epsilon OS=Arabidopsis thaliana OX=3702 GN=At1g31730 PE=1 S...	[more]
Q80V94	2.2e-60	48.95	AP-4 complex subunit epsilon-1 OS=Mus musculus OX=10090 GN=Ap4e1 PE=1 SV=3	[more]
Q9UPM8	3.8e-60	49.79	AP-4 complex subunit epsilon-1 OS=Homo sapiens OX=9606 GN=AP4E1 PE=1 SV=2	[more]
Q54VE0	3.0e-49	41.07	AP-4 complex subunit epsilon OS=Dictyostelium discoideum OX=44689 GN=ap4e1 PE=3 ...	[more]
Q8LPL6	1.2e-21	30.24	AP-2 complex subunit alpha-1 OS=Arabidopsis thaliana OX=3702 GN=ALPHA-ADR PE=1 S...	[more]

BLAST of Lcy12g013620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CVS5	1.4e-142	98.86	AP-4 complex subunit epsilon OS=Momordica charantia OX=3673 GN=LOC111014709 PE=3...	[more]
A0A5D3BUP2	9.2e-142	98.11	AP-4 complex subunit epsilon OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3B9W4	9.2e-142	98.11	AP-4 complex subunit epsilon OS=Cucumis melo OX=3656 GN=LOC103487626 PE=3 SV=1	[more]
A0A0A0KWY0	2.1e-141	97.73	AP-4 complex subunit epsilon OS=Cucumis sativus OX=3659 GN=Csa_4G252910 PE=3 SV=...	[more]
A0A6J1F8Z0	6.6e-140	96.97	AP-4 complex subunit epsilon OS=Cucurbita moschata OX=3662 GN=LOC111443200 PE=3 ...	[more]

BLAST of Lcy12g013620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145241.1	2.9e-142	98.86	AP-4 complex subunit epsilon [Momordica charantia]	[more]
XP_038896947.1	1.1e-141	98.48	AP-4 complex subunit epsilon [Benincasa hispida]	[more]
XP_008444236.1	1.9e-141	98.11	PREDICTED: AP-4 complex subunit epsilon [Cucumis melo] >KAA0052245.1 AP-4 comple...	[more]
XP_031739909.1	4.2e-141	97.73	LOW QUALITY PROTEIN: AP-4 complex subunit epsilon [Cucumis sativus]	[more]
KGN54006.2	1.2e-140	98.10	hypothetical protein Csa_011850 [Cucumis sativus]	[more]

BLAST of Lcy12g013620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31730.1	1.2e-136	91.29	Adaptin family protein	[more]
AT5G22780.1	8.5e-23	30.24	Adaptor protein complex AP-2, alpha subunit	[more]
AT5G22770.1	8.5e-23	30.24	alpha-adaptin	[more]
AT5G22770.3	8.5e-23	30.24	alpha-adaptin	[more]
AT5G22770.2	8.5e-23	30.24	alpha-adaptin	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002553	Clathrin/coatomer adaptor, adaptin-like, N-terminal	PFAM	PF01602	Adaptin_N	coord: 47..264 e-value: 6.4E-40 score: 137.2
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 17..264 e-value: 1.7E-86 score: 292.8
None	No IPR available	PIRSR	PIRSR037091-1	PIRSR037091-1	coord: 29..211 e-value: 2.2E-20 score: 70.3
None	No IPR available	PANTHER	PTHR22780:SF13	AP-4 COMPLEX SUBUNIT EPSILON-1	coord: 13..264
None	No IPR available	PANTHER	PTHR22780	ADAPTIN, ALPHA/GAMMA/EPSILON	coord: 13..264
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 22..263

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy12g013620.1	Lcy12g013620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042545	cell wall modification
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0043086	negative regulation of catalytic activity
biological_process	GO:0045490	pectin catabolic process
biological_process	GO:0006898	receptor-mediated endocytosis
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0030124	AP-4 adaptor complex
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0030117	membrane coat
molecular_function	GO:0045330	aspartyl esterase activity
molecular_function	GO:0140312	cargo adaptor activity
molecular_function	GO:0030599	pectinesterase activity
molecular_function	GO:0046910	pectinesterase inhibitor activity