Lcy12g013610 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy12g013610
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	DNA topoisomerase 2-binding protein 1 isoform X2
Location	Chr12: 41624879 .. 41628138 (-)
RNA-Seq Expression	Lcy12g013610
Synteny	Lcy12g013610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTGCAACTCAAGTCCCTCTCATTTGCTGAAACAGAACAGCAGATTCATGATGGCTTTGCTAGATCCAGGTATTCTTGTTTGACTCTTTCATTAAGAATTAGCACAATTTTACATGAAAAAGAAAATCTCATCTAGCTTTTCCTGTGCAGTCTAGTCAAATCATGTTGGGTTATCGACCTCATCACACTGTCTACTTCAGTTGGACGTGAAACATTGATGGTCTCAAAACAGTGGCAGGATAATCTGCCTTTTAATGATGGACAGTATCCTAGCAGGTTGTCTTCATATCAATCTGTAGCTGCAGGTAACAATATGCATAGTTATTCATTATTCATAATACTTTATCTTTATATGTTTGGTTCTTTATTTATTTTCTACTCTGCGCTGCACCAGAGAGAAACTTTTGGTTGAAGTTCAAATCATTTGACTTGATAATTGGCTCCTCATTTTTATTATTCTACAGATATTTTTCTACTAATCATTATCCATGACAGTATATTTTTATTTGCTAAAAATTATTATCTATTTTCTACTTTTCAAATAACTTATTTTAATAGGCTAGTATTTTGGTTTTTGTCTTATTTTAATAGCCAATAATAACGATTGTAGGCACCGTATCTAATAAAATATCTATTTGGGATGATCAATTGTTGGCCTTGTTGATTGTACTTGGTTGTAAAGAGGCTTTCTACCATGGTTGTAAAGAGGAGGGGCCATCAAATCTTTTAAGTTTATATACCACTTGTCTTCCTCTATCCTTGTCTGGTTCTGGGATCAGAAGTCTAACGAAAAATAAAGCTTTCCTGGCTAAATGGGGTTGGCGCTTTGGAGATGATTGAATGAATTTCTCTCGCACAAACTCTTGCTGACTTTACTCTAAATTTAGAAGATATCTTGCATATCTGGAGATGACCGAATGGATTTCTCTTTTATAAAATCTTGCTGACTTTACTTAAAATGACAGGGAAGACTTGAAGGTCTAGGAGCTTAAAAGCAGTGGGAACTTTACGGTCAGATCACTGATGATACCCGAGCATGTTCTCTAAAATGCTCTTCTCAGCATCATTCATATTAAAATGATCTGGAATACTGAGGCCCCAAAGAAGGTTAAGGTTTTCTTGTGGATTTTTGCATGTGAGAGGCTAAAATACATATTGCATACTTCAAAGAACAATGTTGTTGTTACCTATCTCCCCTAATTGAGGGAGCTCTATGTAGGAAAGACAGTTCTTGATTCATCCATTTCTCAATGGCCCTTTTGTTTCTGCTTGTTGGTTTGAGTTTTTCAAAATTTTTTAAGAATAGTTGGTGCTTGCCTGACAAAGTTTCTGAGGTTTTATTTTGCTGTTAGATGGAACTTATATTAAAGACCATGTTGGATTTCATTGGTCCAGTGGTGTAGCAAGCTTTCTTTGGCGTATAGGCTTATGATTGCTAGTATATTGACATAGGTTGTCTCAATACTCATAAAAGTGAATAAGAATTTGATTTTCAAGCCATGTTTGTATTCATTTCGTCTTTCTGTTGGCTTTCTTTTCTTTTTGCAGCTTGCATATAACAAGGATGAATTCTTCCATACAACTATCTGAAATTCTCTTGTATATGGGCCAACGAAATTGGCGATGAGGTTTCTGTCTTTTCTTTTTCTTGTGTGTGTATATATTCTCCCATAAAAGTGTATAACACAGTGACTCCCCTTTCTAATGTTAATTCTCTGATAAAATGAACTACTACTATTATATTATATTTATCATATTGATTTATTTGTTGTGGTAAAAAATTATTGGTTAAATTACAATTTTAGTTCTCAAACATTCAAGTTTGTGTTTATTTGGTCTCTTTAATTTTCAAGAGTGCTAATAAATTTCCAAGGTTTTAATTTTATATTCAATAGGTAATTAAAATTTTCATTTTTTTTTTCTAATAGTTCTTTGAATTTCAATAGATAATTAAAAAATGTCTAATAGATCAAGCAACCAACTATTTATGGTTTGTCACTTTAAAACTAGATTAGATGATAAAATAGTAATTATTAGCTGATAATGATCTCCACCTCTAAAATCGTTCAATTAAAAAAAAAAAAAAATGTGTGGATACATCTCATGATCATAGGGTACGATTGAGTGGCTGCCATAATTTGAATTAATTTTCTTCTGTAATATATTTTAAAGTATAGTAGATGTGTGGTAGGGAGATTTAATCTCGGATTCAACTACCATAGTTAAAATTCCCTTTGAGTTTTCCTCTATTTTTTTTTTAGAATATTGAGGGTCTATTTGGAATACTTTTTAATTTAAGTGTTTTCAAGAATGCATTTTTAAAAAATATTTTGTACAAAAATTGTTTAGAATTTAAACACTTTTGGTTACATTTTCTCACAAATATTTTTATACACAAGTTATTATATATTTAAAAACTCTAGTTAAAAAATTTGGTTTCTCTCAAAATAGTTTATTTTTTAATAAGTTATTTGGAAGGATTGTAATAGATTTTTTTTTAAATGATTTTTTTTTTCAAAATTAAACACTTAGAAAAGTAAAAAAAAAGGTTAATTTTCAAAATTCTTGAATTGGTTCTTGATTGTGTTGTTTATGATATTTTTTTTAAAGGAAAAAGAAAGGACAGGTTGACTAGTCAAAGGAAAGACGGGAAGCGTTGACTAGTCAACATGTAATCCTATAAAATCCCAGGCTACAGCTTTCCAGTCGTTTCCATTCACTTCCACACTGACACTCAAAATTCCTCTCTCTTTCTCTCTCGTCGAAGTTCGAGAGAGAAAATTGACGAAGCAACGGCCGAGACGCTGAAGCCGAAGCCATTCGCCGGAGCCAACGTGTTCGTGTCTCGCAATCTTGTTGCTCTAGAGATATTCGACGCTCTTCATGACGCTCTGAAGCAGAATGGGGCTGAGGTCTTCCTCTGTTGCGATCCCTCTCGAAACGGGCCTAATGATTATCGTGTTATCTCTTCCGCCGATCATGTATGTAATGTATCATCTAATTAGTGTTTAATTCCTCATTCTTCTTCGGATTGGTTATGTGTGTGTTGGTTTTTTATTCTGGCTCCCAGGAAAAGTTCGAGGATCTTCGCGCGAAGGGGTGCAATTTGCTAGGTATGGTGTTTCTAGGGTTTCATTTATAGCTCCGAATAGGAAAACCTAGTTGTTTGAAATTCTCATTTCAGTCCGTCGCCTGGGACCTGGTGCTCATATCGCATTGCAATTTATTGGTAGAGATGGGTTGCTGACGAATTGA

mRNA sequence

ATGGATTTGCAACTCAAGTCCCTCTCATTTGCTGAAACAGAACAGCAGATTCATGATGGCTTTGCTAGATCCAGTCTAGTCAAATCATGTTGGGTTATCGACCTCATCACACTGTCTACTTCAGTTGGACGTGAAACATTGATGGTCTCAAAACAGTGGCAGGATAATCTGCCTTTTAATGATGGACAGTATCCTAGCAGGTTGTCTTCATATCAATCTGTAGCTGCAGGCTACAGCTTTCCAGTCGTTTCCATTCACTTCCACACTGACACTCAAAATTCCTCTCTCTTTCTCTCTCGTCGAAGTTCGAGAGAGAAAATTGACGAAGCAACGGCCGAGACGCTGAAGCCGAAGCCATTCGCCGGAGCCAACGTGTTCGTGTCTCGCAATCTTGTTGCTCTAGAGATATTCGACGCTCTTCATGACGCTCTGAAGCAGAATGGGGCTGAGGTCTTCCTCTGTTGCGATCCCTCTCGAAACGGGCCTAATGATTATCGTGTTATCTCTTCCGCCGATCATGAAAAGTTCGAGGATCTTCGCGCGAAGGGGTGCAATTTGCTAGTCCGTCGCCTGGGACCTGGTGCTCATATCGCATTGCAATTTATTGGTAGAGATGGGTTGCTGACGAATTGA

Coding sequence (CDS)

ATGGATTTGCAACTCAAGTCCCTCTCATTTGCTGAAACAGAACAGCAGATTCATGATGGCTTTGCTAGATCCAGTCTAGTCAAATCATGTTGGGTTATCGACCTCATCACACTGTCTACTTCAGTTGGACGTGAAACATTGATGGTCTCAAAACAGTGGCAGGATAATCTGCCTTTTAATGATGGACAGTATCCTAGCAGGTTGTCTTCATATCAATCTGTAGCTGCAGGCTACAGCTTTCCAGTCGTTTCCATTCACTTCCACACTGACACTCAAAATTCCTCTCTCTTTCTCTCTCGTCGAAGTTCGAGAGAGAAAATTGACGAAGCAACGGCCGAGACGCTGAAGCCGAAGCCATTCGCCGGAGCCAACGTGTTCGTGTCTCGCAATCTTGTTGCTCTAGAGATATTCGACGCTCTTCATGACGCTCTGAAGCAGAATGGGGCTGAGGTCTTCCTCTGTTGCGATCCCTCTCGAAACGGGCCTAATGATTATCGTGTTATCTCTTCCGCCGATCATGAAAAGTTCGAGGATCTTCGCGCGAAGGGGTGCAATTTGCTAGTCCGTCGCCTGGGACCTGGTGCTCATATCGCATTGCAATTTATTGGTAGAGATGGGTTGCTGACGAATTGA

Protein sequence

MDLQLKSLSFAETEQQIHDGFARSSLVKSCWVIDLITLSTSVGRETLMVSKQWQDNLPFNDGQYPSRLSSYQSVAAGYSFPVVSIHFHTDTQNSSLFLSRRSSREKIDEATAETLKPKPFAGANVFVSRNLVALEIFDALHDALKQNGAEVFLCCDPSRNGPNDYRVISSADHEKFEDLRAKGCNLLVRRLGPGAHIALQFIGRDGLLTN

Homology

[Close]

BLAST of Lcy12g013610 vs. ExPASy TrEMBL
Match: A0A1S4DV57 (DNA topoisomerase 2-binding protein 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487611 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 7.3e-33
Identity = 70/73 (95.89%), Postives = 71/73 (97.26%), Query Frame = 0


Query: 115 LKPKPFAGANVFVSRNLVALEIFDALHDALKQNGAEVFLCCDPSRNGPNDYRVISSADHE 174
           LKPKPFAGANVFVSRNLVA E+FDALHDALKQNGAEVFLCCDPSRNGPNDY VISSADHE
Sbjct: 2   LKPKPFAGANVFVSRNLVAPEMFDALHDALKQNGAEVFLCCDPSRNGPNDYHVISSADHE 61

Query: 175 KFEDLRAKGCNLL 188
           KFEDLRAKGCNLL
Sbjct: 62  KFEDLRAKGCNLL 74

[Close]

BLAST of Lcy12g013610 vs. ExPASy TrEMBL
Match: A0A1S4DV59 (DNA topoisomerase 2-binding protein 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487611 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 7.3e-33
Identity = 70/73 (95.89%), Postives = 71/73 (97.26%), Query Frame = 0


Query: 115 LKPKPFAGANVFVSRNLVALEIFDALHDALKQNGAEVFLCCDPSRNGPNDYRVISSADHE 174
           LKPKPFAGANVFVSRNLVA E+FDALHDALKQNGAEVFLCCDPSRNGPNDY VISSADHE
Sbjct: 2   LKPKPFAGANVFVSRNLVAPEMFDALHDALKQNGAEVFLCCDPSRNGPNDYHVISSADHE 61

Query: 175 KFEDLRAKGCNLL 188
           KFEDLRAKGCNLL
Sbjct: 62  KFEDLRAKGCNLL 74

[Close]

BLAST of Lcy12g013610 vs. ExPASy TrEMBL
Match: A0A5D3BRP8 (DNA topoisomerase 2-binding protein 1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00080 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 7.3e-33
Identity = 70/73 (95.89%), Postives = 71/73 (97.26%), Query Frame = 0


Query: 115 LKPKPFAGANVFVSRNLVALEIFDALHDALKQNGAEVFLCCDPSRNGPNDYRVISSADHE 174
           LKPKPFAGANVFVSRNLVA E+FDALHDALKQNGAEVFLCCDPSRNGPNDY VISSADHE
Sbjct: 2   LKPKPFAGANVFVSRNLVAPEMFDALHDALKQNGAEVFLCCDPSRNGPNDYHVISSADHE 61

Query: 175 KFEDLRAKGCNLL 188
           KFEDLRAKGCNLL
Sbjct: 62  KFEDLRAKGCNLL 74

[Close]

BLAST of Lcy12g013610 vs. ExPASy TrEMBL
Match: A0A5A7U8G5 (DNA topoisomerase 2-binding protein 1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold207G00240 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 7.3e-33
Identity = 70/73 (95.89%), Postives = 71/73 (97.26%), Query Frame = 0


Query: 115 LKPKPFAGANVFVSRNLVALEIFDALHDALKQNGAEVFLCCDPSRNGPNDYRVISSADHE 174
           LKPKPFAGANVFVSRNLVA E+FDALHDALKQNGAEVFLCCDPSRNGPNDY VISSADHE
Sbjct: 2   LKPKPFAGANVFVSRNLVAPEMFDALHDALKQNGAEVFLCCDPSRNGPNDYHVISSADHE 61

Query: 175 KFEDLRAKGCNLL 188
           KFEDLRAKGCNLL
Sbjct: 62  KFEDLRAKGCNLL 74

[Close]

BLAST of Lcy12g013610 vs. ExPASy TrEMBL
Match: A0A6J1FES7 (DNA topoisomerase 2-binding protein 1-A isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111443414 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 3.6e-32
Identity = 69/73 (94.52%), Postives = 70/73 (95.89%), Query Frame = 0


Query: 115 LKPKPFAGANVFVSRNLVALEIFDALHDALKQNGAEVFLCCDPSRNGPNDYRVISSADHE 174
           LKPKPFAGANVFVSRNLVA EIFDALHDALKQNGAEVFLCCDP+RNGP DY VISSADHE
Sbjct: 2   LKPKPFAGANVFVSRNLVAPEIFDALHDALKQNGAEVFLCCDPARNGPKDYHVISSADHE 61

Query: 175 KFEDLRAKGCNLL 188
           KFEDLRAKGCNLL
Sbjct: 62  KFEDLRAKGCNLL 74

[Close]

BLAST of Lcy12g013610 vs. NCBI nr
Match: XP_031745330.1 (LOW QUALITY PROTEIN: protein ECT2-like [Cucumis sativus])

HSP 1 Score: 153.7 bits (387), Expect = 1.8e-33
Identity = 87/153 (56.86%), Postives = 101/153 (66.01%), Query Frame = 0


Query: 42  VGRETLMVSKQWQD--NLPFNDGQYPSRLSSYQSVAAGYSFPVVSIHFHTDT-----QNS 101
           VGR  +  SK  +D  NL F +   P+  +   +V A   F     H H+ +      + 
Sbjct: 57  VGRANMNGSKLGKDYQNLQF-ESYKPTIPTRSTNVKAQLPFTKPFSHSHSQSFIPPISHK 116

Query: 102 SLFLSRRSSREKIDEATAETLKPKPFAGANVFVSRNLVALEIFDALHDALKQNGAEVFLC 161
            L L    S +K+ EAT + LKPKPFAGANVFVSRNLVA E+FD  HDALKQNGAEVFLC
Sbjct: 117 ILSLVGLPSTQKVIEATLQLLKPKPFAGANVFVSRNLVASEMFDPFHDALKQNGAEVFLC 176

Query: 162 CDPSRNGPNDYRVISSADHEKFEDLRAKGCNLL 188
           CDPS+N PNDY VISSADH KFEDLRAKGCNLL
Sbjct: 177 CDPSQNAPNDYHVISSADHAKFEDLRAKGCNLL 208

[Close]

BLAST of Lcy12g013610 vs. NCBI nr
Match: XP_031745859.1 (LOW QUALITY PROTEIN: DNA topoisomerase 2-binding protein 1-A [Cucumis sativus])

HSP 1 Score: 153.3 bits (386), Expect = 2.3e-33
Identity = 78/107 (72.90%), Postives = 86/107 (80.37%), Query Frame = 0


Query: 87  FHTDTQN-----SSLFLSRR-SSREKIDEATAETLKPKPFAGANVFVSRNLVALEIFDAL 146
           FH+ +Q+     S   LSRR  S +K+ EAT + LKPKPFAGANVFVSRNLVA E+FD  
Sbjct: 112 FHSHSQSFIPPISHKILSRRLPSTQKVIEATLQLLKPKPFAGANVFVSRNLVASEMFDPF 171

Query: 147 HDALKQNGAEVFLCCDPSRNGPNDYRVISSADHEKFEDLRAKGCNLL 188
           HDALKQNGAEVFLCCDPS+N PNDY VISSADH KFEDLRAKGCNLL
Sbjct: 172 HDALKQNGAEVFLCCDPSQNAPNDYHVISSADHAKFEDLRAKGCNLL 218

[Close]

BLAST of Lcy12g013610 vs. NCBI nr
Match: KAA0052213.1 (DNA topoisomerase 2-binding protein 1 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 150.6 bits (379), Expect = 1.5e-32
Identity = 70/73 (95.89%), Postives = 71/73 (97.26%), Query Frame = 0


Query: 115 LKPKPFAGANVFVSRNLVALEIFDALHDALKQNGAEVFLCCDPSRNGPNDYRVISSADHE 174
           LKPKPFAGANVFVSRNLVA E+FDALHDALKQNGAEVFLCCDPSRNGPNDY VISSADHE
Sbjct: 2   LKPKPFAGANVFVSRNLVAPEMFDALHDALKQNGAEVFLCCDPSRNGPNDYHVISSADHE 61

Query: 175 KFEDLRAKGCNLL 188
           KFEDLRAKGCNLL
Sbjct: 62  KFEDLRAKGCNLL 74

[Close]

BLAST of Lcy12g013610 vs. NCBI nr
Match: TYK01780.1 (DNA topoisomerase 2-binding protein 1 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 150.6 bits (379), Expect = 1.5e-32
Identity = 70/73 (95.89%), Postives = 71/73 (97.26%), Query Frame = 0


Query: 115 LKPKPFAGANVFVSRNLVALEIFDALHDALKQNGAEVFLCCDPSRNGPNDYRVISSADHE 174
           LKPKPFAGANVFVSRNLVA E+FDALHDALKQNGAEVFLCCDPSRNGPNDY VISSADHE
Sbjct: 2   LKPKPFAGANVFVSRNLVAPEMFDALHDALKQNGAEVFLCCDPSRNGPNDYHVISSADHE 61

Query: 175 KFEDLRAKGCNLL 188
           KFEDLRAKGCNLL
Sbjct: 62  KFEDLRAKGCNLL 74

[Close]

BLAST of Lcy12g013610 vs. NCBI nr
Match: XP_016899869.1 (PREDICTED: DNA topoisomerase 2-binding protein 1 isoform X1 [Cucumis melo] >XP_016899870.1 PREDICTED: DNA topoisomerase 2-binding protein 1 isoform X1 [Cucumis melo])

HSP 1 Score: 150.6 bits (379), Expect = 1.5e-32
Identity = 70/73 (95.89%), Postives = 71/73 (97.26%), Query Frame = 0


Query: 115 LKPKPFAGANVFVSRNLVALEIFDALHDALKQNGAEVFLCCDPSRNGPNDYRVISSADHE 174
           LKPKPFAGANVFVSRNLVA E+FDALHDALKQNGAEVFLCCDPSRNGPNDY VISSADHE
Sbjct: 2   LKPKPFAGANVFVSRNLVAPEMFDALHDALKQNGAEVFLCCDPSRNGPNDYHVISSADHE 61

Query: 175 KFEDLRAKGCNLL 188
           KFEDLRAKGCNLL
Sbjct: 62  KFEDLRAKGCNLL 74

[Close]

BLAST of Lcy12g013610 vs. TAIR 10
Match: AT1G77320.1 (transcription coactivators )

HSP 1 Score: 113.2 bits (282), Expect = 2.5e-25
Identity = 49/68 (72.06%), Postives = 59/68 (86.76%), Query Frame = 0


Query: 120 FAGANVFVSRNLVALEIFDALHDALKQNGAEVFLCCDPSRNGPNDYRVISSADHEKFEDL 179
           F GANVF+SRNLV  E+FD L DA K NGAE+FLCCDPSR+GP+D+ VI+S DHEKF+DL
Sbjct: 7   FKGANVFMSRNLVPPEVFDTLLDAFKLNGAEIFLCCDPSRSGPSDFHVIASPDHEKFKDL 66

Query: 180 RAKGCNLL 188
           +AKGCNL+
Sbjct: 67  KAKGCNLI 74

[Close]

BLAST of Lcy12g013610 vs. TAIR 10
Match: AT1G77320.2 (transcription coactivators )

HSP 1 Score: 98.6 bits (244), Expect = 6.3e-21
Identity = 45/68 (66.18%), Postives = 54/68 (79.41%), Query Frame = 0


Query: 120 FAGANVFVSRNLVALEIFDALHDALKQNGAEVFLCCDPSRNGPNDYRVISSADHEKFEDL 179
           F GANVF+SRNLV  E+FD L DA K NGAE+FLCCDPSR+GP+D+       HEKF+DL
Sbjct: 7   FKGANVFMSRNLVPPEVFDTLLDAFKLNGAEIFLCCDPSRSGPSDF-------HEKFKDL 66

Query: 180 RAKGCNLL 188
           +AKGCNL+
Sbjct: 67  KAKGCNLI 67

The following BLAST results are available for this feature:

BLAST of Lcy12g013610 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy12g013610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DV57	7.3e-33	95.89	DNA topoisomerase 2-binding protein 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A1S4DV59	7.3e-33	95.89	DNA topoisomerase 2-binding protein 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A5D3BRP8	7.3e-33	95.89	DNA topoisomerase 2-binding protein 1 isoform X2 OS=Cucumis melo var. makuwa OX=...	[more]
A0A5A7U8G5	7.3e-33	95.89	DNA topoisomerase 2-binding protein 1 isoform X2 OS=Cucumis melo var. makuwa OX=...	[more]
A0A6J1FES7	3.6e-32	94.52	DNA topoisomerase 2-binding protein 1-A isoform X2 OS=Cucurbita moschata OX=3662...	[more]

BLAST of Lcy12g013610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031745330.1	1.8e-33	56.86	LOW QUALITY PROTEIN: protein ECT2-like [Cucumis sativus]	[more]
XP_031745859.1	2.3e-33	72.90	LOW QUALITY PROTEIN: DNA topoisomerase 2-binding protein 1-A [Cucumis sativus]	[more]
KAA0052213.1	1.5e-32	95.89	DNA topoisomerase 2-binding protein 1 isoform X2 [Cucumis melo var. makuwa]	[more]
TYK01780.1	1.5e-32	95.89	DNA topoisomerase 2-binding protein 1 isoform X2 [Cucumis melo var. makuwa]	[more]
XP_016899869.1	1.5e-32	95.89	PREDICTED: DNA topoisomerase 2-binding protein 1 isoform X1 [Cucumis melo] >XP_0...	[more]

BLAST of Lcy12g013610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G77320.1	2.5e-25	72.06	transcription coactivators	[more]
AT1G77320.2	6.3e-21	66.18	transcription coactivators	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR13561	DNA REPLICATION REGULATOR DPB11-RELATED	coord: 120..193

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy12g013610.1	Lcy12g013610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016853	isomerase activity