Lcy12g013510 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy12g013510
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	NDR1/HIN1-like protein 12
Location	Chr12: 41512661 .. 41513266 (-)
RNA-Seq Expression	Lcy12g013510
Synteny	Lcy12g013510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCACCAAATTTCCTATCCAGTCTAAAGCGACATACTCATCCTCTGATTTGGATTGCCGGCATAATCTGCGCCGCCATAGCCCTAGCAGTGATAATCGCAGGCATCGTCATCTTCATCGGCTATGTGACGATCCGTCCTAGGGTGCCTTCAATCAGCGTAACCGACGGACATCTCGACAGAATCCGAAGCAGCAGAACCGGCTTGCTAGAAGTCCAGATGAAGATCGTCGTCCGAGCCGAGAATCAAAATGCCAGAGCACACGCAAGCTTCTCGCAGACCGATTTCGTCCTGATCTTCGACGGCATAGAGATCGCATCACTGGTGGCTCACCGGCCGTTCAAAGTGAACAAGATGAGTTACCTGGATTTGCATTTCTTAGTGGAATCGTCGGCGATTCCGCTGAGTTCGACGCAGATGCAGCATCTCAGCTGGTCGCTGAAGAGGAATTTGATGCAATTCGATCTGAAAGGAAGCTCGAGAACTCGATGGCGAGTAGGAGTTCTTGGACCGCTCAAGTTTTGGTGCCATTTGAACTGCCATCTCAGGTTTTACCCGCGCAATGGAAGCTACATTCCCGCGCCCTGTACTTCGAAGGAGAAGTAA

mRNA sequence

ATGCCACCAAATTTCCTATCCAGTCTAAAGCGACATACTCATCCTCTGATTTGGATTGCCGGCATAATCTGCGCCGCCATAGCCCTAGCAGTGATAATCGCAGGCATCGTCATCTTCATCGGCTATGTGACGATCCGTCCTAGGGTGCCTTCAATCAGCGTAACCGACGGACATCTCGACAGAATCCGAAGCAGCAGAACCGGCTTGCTAGAAGTCCAGATGAAGATCGTCGTCCGAGCCGAGAATCAAAATGCCAGAGCACACGCAAGCTTCTCGCAGACCGATTTCGTCCTGATCTTCGACGGCATAGAGATCGCATCACTGGTGGCTCACCGGCCGTTCAAAGTGAACAAGATGAGTTACCTGGATTTGCATTTCTTAGTGGAATCGTCGGCGATTCCGCTGAGTTCGACGCAGATGCAGCATCTCAGCTGGTCGCTGAAGAGGAATTTGATGCAATTCGATCTGAAAGGAAGCTCGAGAACTCGATGGCGAGTAGGAGTTCTTGGACCGCTCAAGTTTTGGTGCCATTTGAACTGCCATCTCAGGTTTTACCCGCGCAATGGAAGCTACATTCCCGCGCCCTGTACTTCGAAGGAGAAGTAA

Coding sequence (CDS)

ATGCCACCAAATTTCCTATCCAGTCTAAAGCGACATACTCATCCTCTGATTTGGATTGCCGGCATAATCTGCGCCGCCATAGCCCTAGCAGTGATAATCGCAGGCATCGTCATCTTCATCGGCTATGTGACGATCCGTCCTAGGGTGCCTTCAATCAGCGTAACCGACGGACATCTCGACAGAATCCGAAGCAGCAGAACCGGCTTGCTAGAAGTCCAGATGAAGATCGTCGTCCGAGCCGAGAATCAAAATGCCAGAGCACACGCAAGCTTCTCGCAGACCGATTTCGTCCTGATCTTCGACGGCATAGAGATCGCATCACTGGTGGCTCACCGGCCGTTCAAAGTGAACAAGATGAGTTACCTGGATTTGCATTTCTTAGTGGAATCGTCGGCGATTCCGCTGAGTTCGACGCAGATGCAGCATCTCAGCTGGTCGCTGAAGAGGAATTTGATGCAATTCGATCTGAAAGGAAGCTCGAGAACTCGATGGCGAGTAGGAGTTCTTGGACCGCTCAAGTTTTGGTGCCATTTGAACTGCCATCTCAGGTTTTACCCGCGCAATGGAAGCTACATTCCCGCGCCCTGTACTTCGAAGGAGAAGTAA

Protein sequence

MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLDRIRSSRTGLLEVQMKIVVRAENQNARAHASFSQTDFVLIFDGIEIASLVAHRPFKVNKMSYLDLHFLVESSAIPLSSTQMQHLSWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCHLNCHLRFYPRNGSYIPAPCTSKEK

Homology

[Close]

BLAST of Lcy12g013510 vs. ExPASy TrEMBL
Match: A0A6J1FL61 (uncharacterized protein LOC111446247 OS=Cucurbita moschata OX=3662 GN=LOC111446247 PE=4 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 2.4e-105
Identity = 192/201 (95.52%), Postives = 197/201 (98.01%), Query Frame = 0


Query: 1   MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLD 60
           MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVP+ISVTDGHLD
Sbjct: 1   MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLD 60

Query: 61  RIRSSRTGLLEVQMKIVVRAENQNARAHASFSQTDFVLIFDGIEIASLVAHRPFKVNKMS 120
           RIRSSRTGLLEVQMKIVVRAENQNARAHASFS TDFVLIFDGIEIASLVAHRPFKVNKMS
Sbjct: 61  RIRSSRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIFDGIEIASLVAHRPFKVNKMS 120

Query: 121 YLDLHFLVESSAIPLSSTQMQHLSWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCHLNC 180
           YLDLHFLVESSAIPL+ TQMQHL WSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWC LNC
Sbjct: 121 YLDLHFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNC 180

Query: 181 HLRFYPRNGSYIPAPCTSKEK 202
           HLRFYPRNGSYIPAPC+S++K
Sbjct: 181 HLRFYPRNGSYIPAPCSSRDK 201

[Close]

BLAST of Lcy12g013510 vs. ExPASy TrEMBL
Match: A0A5D3BSN8 (NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00630 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 2.9e-103
Identity = 187/201 (93.03%), Postives = 195/201 (97.01%), Query Frame = 0


Query: 1   MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLD 60
           MPPNFLSSLKRHTHPLIWIAGIICA IALAVI+AGIVIFIGYVTIRPRVPSISVTDGHLD
Sbjct: 1   MPPNFLSSLKRHTHPLIWIAGIICATIALAVIVAGIVIFIGYVTIRPRVPSISVTDGHLD 60

Query: 61  RIRSSRTGLLEVQMKIVVRAENQNARAHASFSQTDFVLIFDGIEIASLVAHRPFKVNKMS 120
           RIRSSRTGLLEVQMKIVVRAENQNA+AHASFS+TDFVL+FDGIEIASLVAHRPFKVNKMS
Sbjct: 61  RIRSSRTGLLEVQMKIVVRAENQNAKAHASFSKTDFVLLFDGIEIASLVAHRPFKVNKMS 120

Query: 121 YLDLHFLVESSAIPLSSTQMQHLSWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCHLNC 180
           YLDLHFLVESSAIPL STQMQHLSWSLKRNL+QFDLKGSSRTRWRVG+LGPLKFWC LNC
Sbjct: 121 YLDLHFLVESSAIPLDSTQMQHLSWSLKRNLIQFDLKGSSRTRWRVGILGPLKFWCRLNC 180

Query: 181 HLRFYPRNGSYIPAPCTSKEK 202
           HLRF PRNGSYIP PC+S +K
Sbjct: 181 HLRFLPRNGSYIPMPCSSNQK 201

[Close]

BLAST of Lcy12g013510 vs. ExPASy TrEMBL
Match: A0A0A0L1I9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G242860 PE=4 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 3.2e-102
Identity = 185/201 (92.04%), Postives = 196/201 (97.51%), Query Frame = 0


Query: 1   MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLD 60
           MPPNFLSSLKRHTHPLIWIAGIICA IALAVIIAGIVIFIGYVTIRPRVPSISVTDGHL+
Sbjct: 1   MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLE 60

Query: 61  RIRSSRTGLLEVQMKIVVRAENQNARAHASFSQTDFVLIFDGIEIASLVAHRPFKVNKMS 120
           RIRSSRTGLLEVQMKIVVRAENQNA+AHA FS+TDFVL+FDGIEIASLVAHRPFKVNKM+
Sbjct: 61  RIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLVAHRPFKVNKMN 120

Query: 121 YLDLHFLVESSAIPLSSTQMQHLSWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCHLNC 180
           YLDLHFLVESSAIPL STQMQHLSWSLKR+L+QFDLKGSSRTRWRVGVLGPLKFWC L+C
Sbjct: 121 YLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDC 180

Query: 181 HLRFYPRNGSYIPAPCTSKEK 202
           HLRF+PRNGSYIP PC+SK+K
Sbjct: 181 HLRFFPRNGSYIPTPCSSKQK 201

[Close]

BLAST of Lcy12g013510 vs. ExPASy TrEMBL
Match: A0A6J1C199 (uncharacterized protein LOC111007456 OS=Momordica charantia OX=3673 GN=LOC111007456 PE=4 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 7.1e-102
Identity = 187/201 (93.03%), Postives = 193/201 (96.02%), Query Frame = 0


Query: 1   MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLD 60
           MPP FLSSLKRHTHPLIWIAGIICA IALAVII GIVIFIGYVTIRPRVPSISVTDGHLD
Sbjct: 1   MPPKFLSSLKRHTHPLIWIAGIICATIALAVIIGGIVIFIGYVTIRPRVPSISVTDGHLD 60

Query: 61  RIRSSRTGLLEVQMKIVVRAENQNARAHASFSQTDFVLIFDGIEIASLVAHRPFKVNKMS 120
           RIRSSRTGLLEVQMKIVVRAENQNA+AHASFSQTDFVLIFDGIEIASLVA RPFKV+KMS
Sbjct: 61  RIRSSRTGLLEVQMKIVVRAENQNAKAHASFSQTDFVLIFDGIEIASLVARRPFKVSKMS 120

Query: 121 YLDLHFLVESSAIPLSSTQMQHLSWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCHLNC 180
           YLDLHFLVESSAIPL+ TQM HLSWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWC LNC
Sbjct: 121 YLDLHFLVESSAIPLNPTQMDHLSWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNC 180

Query: 181 HLRFYPRNGSYIPAPCTSKEK 202
           HLRF+PRNGSY+PAPC+SK K
Sbjct: 181 HLRFHPRNGSYVPAPCSSKGK 201

[Close]

BLAST of Lcy12g013510 vs. ExPASy TrEMBL
Match: A0A6J1FEV3 (uncharacterized protein LOC111443437 OS=Cucurbita moschata OX=3662 GN=LOC111443437 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 9.3e-102
Identity = 187/201 (93.03%), Postives = 192/201 (95.52%), Query Frame = 0


Query: 1   MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLD 60
           MPPNFLSSLKRHTHPLIWIAGIICA IA+AVIIAGIVIFIGYVTIRP VPSISVTDGHLD
Sbjct: 13  MPPNFLSSLKRHTHPLIWIAGIICATIAVAVIIAGIVIFIGYVTIRPTVPSISVTDGHLD 72

Query: 61  RIRSSRTGLLEVQMKIVVRAENQNARAHASFSQTDFVLIFDGIEIASLVAHRPFKVNKMS 120
           RIR+SR GLLEVQMKIVVRAENQNARA ASFS TDFVLIFDGIEIASLVAHRPFKVNKMS
Sbjct: 73  RIRNSRIGLLEVQMKIVVRAENQNARAQASFSHTDFVLIFDGIEIASLVAHRPFKVNKMS 132

Query: 121 YLDLHFLVESSAIPLSSTQMQHLSWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCHLNC 180
           YLDLHFLVESSAIPL+  QMQHLSWSL RNLMQFDLKGSSRTRWRVGVLGPLKFWCHLNC
Sbjct: 133 YLDLHFLVESSAIPLNPMQMQHLSWSLNRNLMQFDLKGSSRTRWRVGVLGPLKFWCHLNC 192

Query: 181 HLRFYPRNGSYIPAPCTSKEK 202
            LRFYPRNGSYIPAPC+SK+K
Sbjct: 193 RLRFYPRNGSYIPAPCSSKDK 213

[Close]

BLAST of Lcy12g013510 vs. NCBI nr
Match: XP_022940744.1 (uncharacterized protein LOC111446247 [Cucurbita moschata] >KAG6608016.1 hypothetical protein SDJN03_01358, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031640.1 hypothetical protein SDJN02_05681, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 391.3 bits (1004), Expect = 4.9e-105
Identity = 192/201 (95.52%), Postives = 197/201 (98.01%), Query Frame = 0


Query: 1   MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLD 60
           MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVP+ISVTDGHLD
Sbjct: 1   MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLD 60

Query: 61  RIRSSRTGLLEVQMKIVVRAENQNARAHASFSQTDFVLIFDGIEIASLVAHRPFKVNKMS 120
           RIRSSRTGLLEVQMKIVVRAENQNARAHASFS TDFVLIFDGIEIASLVAHRPFKVNKMS
Sbjct: 61  RIRSSRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIFDGIEIASLVAHRPFKVNKMS 120

Query: 121 YLDLHFLVESSAIPLSSTQMQHLSWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCHLNC 180
           YLDLHFLVESSAIPL+ TQMQHL WSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWC LNC
Sbjct: 121 YLDLHFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNC 180

Query: 181 HLRFYPRNGSYIPAPCTSKEK 202
           HLRFYPRNGSYIPAPC+S++K
Sbjct: 181 HLRFYPRNGSYIPAPCSSRDK 201

[Close]

BLAST of Lcy12g013510 vs. NCBI nr
Match: XP_038896622.1 (uncharacterized protein LOC120084885 [Benincasa hispida])

HSP 1 Score: 390.6 bits (1002), Expect = 8.3e-105
Identity = 190/201 (94.53%), Postives = 198/201 (98.51%), Query Frame = 0


Query: 1   MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLD 60
           MPPNFLSS+KRHTHPLIWIAGIICA IALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLD
Sbjct: 1   MPPNFLSSIKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLD 60

Query: 61  RIRSSRTGLLEVQMKIVVRAENQNARAHASFSQTDFVLIFDGIEIASLVAHRPFKVNKMS 120
           RIRSSRTGLLEVQMKIVVRAENQNARAHASFSQTDFVL+FDGIEIASLVAHRPFKVNKMS
Sbjct: 61  RIRSSRTGLLEVQMKIVVRAENQNARAHASFSQTDFVLLFDGIEIASLVAHRPFKVNKMS 120

Query: 121 YLDLHFLVESSAIPLSSTQMQHLSWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCHLNC 180
           YLDLHFLVESSAIPL+ TQMQHLSWSLKR+LMQFDLKGSSRTRWRVG+LGPLKFWC LNC
Sbjct: 121 YLDLHFLVESSAIPLNPTQMQHLSWSLKRDLMQFDLKGSSRTRWRVGILGPLKFWCRLNC 180

Query: 181 HLRFYPRNGSYIPAPCTSKEK 202
           HLRFYPRNGSYIPAPC+S++K
Sbjct: 181 HLRFYPRNGSYIPAPCSSRQK 201

[Close]

BLAST of Lcy12g013510 vs. NCBI nr
Match: KAA0052257.1 (NDR1/HIN1-like protein 12 [Cucumis melo var. makuwa] >TYK01822.1 NDR1/HIN1-like protein 12 [Cucumis melo var. makuwa])

HSP 1 Score: 384.4 bits (986), Expect = 5.9e-103
Identity = 187/201 (93.03%), Postives = 195/201 (97.01%), Query Frame = 0


Query: 1   MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLD 60
           MPPNFLSSLKRHTHPLIWIAGIICA IALAVI+AGIVIFIGYVTIRPRVPSISVTDGHLD
Sbjct: 1   MPPNFLSSLKRHTHPLIWIAGIICATIALAVIVAGIVIFIGYVTIRPRVPSISVTDGHLD 60

Query: 61  RIRSSRTGLLEVQMKIVVRAENQNARAHASFSQTDFVLIFDGIEIASLVAHRPFKVNKMS 120
           RIRSSRTGLLEVQMKIVVRAENQNA+AHASFS+TDFVL+FDGIEIASLVAHRPFKVNKMS
Sbjct: 61  RIRSSRTGLLEVQMKIVVRAENQNAKAHASFSKTDFVLLFDGIEIASLVAHRPFKVNKMS 120

Query: 121 YLDLHFLVESSAIPLSSTQMQHLSWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCHLNC 180
           YLDLHFLVESSAIPL STQMQHLSWSLKRNL+QFDLKGSSRTRWRVG+LGPLKFWC LNC
Sbjct: 121 YLDLHFLVESSAIPLDSTQMQHLSWSLKRNLIQFDLKGSSRTRWRVGILGPLKFWCRLNC 180

Query: 181 HLRFYPRNGSYIPAPCTSKEK 202
           HLRF PRNGSYIP PC+S +K
Sbjct: 181 HLRFLPRNGSYIPMPCSSNQK 201

[Close]

BLAST of Lcy12g013510 vs. NCBI nr
Match: KGN53998.2 (hypothetical protein Csa_011831 [Cucumis sativus])

HSP 1 Score: 380.9 bits (977), Expect = 6.6e-102
Identity = 185/201 (92.04%), Postives = 196/201 (97.51%), Query Frame = 0


Query: 1   MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLD 60
           MPPNFLSSLKRHTHPLIWIAGIICA IALAVIIAGIVIFIGYVTIRPRVPSISVTDGHL+
Sbjct: 538 MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLE 597

Query: 61  RIRSSRTGLLEVQMKIVVRAENQNARAHASFSQTDFVLIFDGIEIASLVAHRPFKVNKMS 120
           RIRSSRTGLLEVQMKIVVRAENQNA+AHA FS+TDFVL+FDGIEIASLVAHRPFKVNKM+
Sbjct: 598 RIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLVAHRPFKVNKMN 657

Query: 121 YLDLHFLVESSAIPLSSTQMQHLSWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCHLNC 180
           YLDLHFLVESSAIPL STQMQHLSWSLKR+L+QFDLKGSSRTRWRVGVLGPLKFWC L+C
Sbjct: 658 YLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDC 717

Query: 181 HLRFYPRNGSYIPAPCTSKEK 202
           HLRF+PRNGSYIP PC+SK+K
Sbjct: 718 HLRFFPRNGSYIPTPCSSKQK 738

[Close]

BLAST of Lcy12g013510 vs. NCBI nr
Match: XP_022135525.1 (uncharacterized protein LOC111007456 [Momordica charantia])

HSP 1 Score: 379.8 bits (974), Expect = 1.5e-101
Identity = 187/201 (93.03%), Postives = 193/201 (96.02%), Query Frame = 0


Query: 1   MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLD 60
           MPP FLSSLKRHTHPLIWIAGIICA IALAVII GIVIFIGYVTIRPRVPSISVTDGHLD
Sbjct: 1   MPPKFLSSLKRHTHPLIWIAGIICATIALAVIIGGIVIFIGYVTIRPRVPSISVTDGHLD 60

Query: 61  RIRSSRTGLLEVQMKIVVRAENQNARAHASFSQTDFVLIFDGIEIASLVAHRPFKVNKMS 120
           RIRSSRTGLLEVQMKIVVRAENQNA+AHASFSQTDFVLIFDGIEIASLVA RPFKV+KMS
Sbjct: 61  RIRSSRTGLLEVQMKIVVRAENQNAKAHASFSQTDFVLIFDGIEIASLVARRPFKVSKMS 120

Query: 121 YLDLHFLVESSAIPLSSTQMQHLSWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCHLNC 180
           YLDLHFLVESSAIPL+ TQM HLSWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWC LNC
Sbjct: 121 YLDLHFLVESSAIPLNPTQMDHLSWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNC 180

Query: 181 HLRFYPRNGSYIPAPCTSKEK 202
           HLRF+PRNGSY+PAPC+SK K
Sbjct: 181 HLRFHPRNGSYVPAPCSSKGK 201

[Close]

BLAST of Lcy12g013510 vs. TAIR 10
Match: AT5G45320.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: inflorescence meristem, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G26350.1); Has 253 Blast hits to 253 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 253; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 196.8 bits (499), Expect = 1.6e-50
Identity = 99/192 (51.56%), Postives = 136/192 (70.83%), Query Frame = 0


Query: 11  RH-THPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLDRIRSSRTGL 70
           RH T P IW A IICA I++ VI+ GI++F+GY+ I PRVP ISV D HLD ++    G+
Sbjct: 7   RHGTSPFIWCAAIICAIISIVVIVGGIIVFVGYLVIHPRVPIISVADAHLDFLKYDIVGV 66

Query: 71  LEVQMKIVVRAENQNARAHASFSQTDFVLIFDGIEIASLVAHRPFKVNKMSYLDLHFLVE 130
           L+ Q+ IV+R EN NA+AHA F +T+F L ++G  IA L A   F+V K   + L +LV+
Sbjct: 67  LQTQLTIVIRVENDNAKAHALFDETEFKLSYEGKPIAILKAPE-FEVVKEKSMFLPYLVQ 126

Query: 131 SSAIPLSSTQMQHLSWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCHLNCHLRFYPRNG 190
           S  IPL+ T MQ + +++K++++ F+LKG SRTRWRVG LG +KF C+L+C LRF P + 
Sbjct: 127 SYPIPLNPTMMQAVDYAVKKDVITFELKGGSRTRWRVGPLGSVKFECNLSCQLRFRPSDH 186

Query: 191 SYIPAPCTSKEK 202
           SYIP+PCTS  K
Sbjct: 187 SYIPSPCTSAHK 197

[Close]

BLAST of Lcy12g013510 vs. TAIR 10
Match: AT1G13050.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G26350.1); Has 538 Blast hits to 510 proteins in 88 species: Archae - 0; Bacteria - 23; Metazoa - 81; Fungi - 36; Plants - 361; Viruses - 8; Other Eukaryotes - 29 (source: NCBI BLink). )

HSP 1 Score: 65.9 bits (159), Expect = 4.4e-11
Identity = 49/191 (25.65%), Postives = 84/191 (43.98%), Query Frame = 0


Query: 11  RHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLDRIRSSRTGLL 70
           + T P+   A I CA + + +I++G+++ + Y+  RPR P   ++   L+        +L
Sbjct: 128 KRTKPMTLPATICCAILLIVLILSGLILLLVYLANRPRSPYFDISAATLNTANLDMGYVL 187

Query: 71  EVQMKIVVRAENQNARAHASFSQTDFVLIFDGIEIASLVAH-RPFKVNKMSYLDLHFLVE 130
              + +VV   N + ++   FS   F L F    IA+   H  PF V K   +   F + 
Sbjct: 188 NGDLAVVVNFTNPSKKSSVDFSYVMFELYFYNTLIAT--EHIEPFIVPKGMSMFTSFHLV 247

Query: 131 SSAIPLSSTQMQHLSWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCHLNCHLRF-YPRN 190
           SS + +   Q Q L   L    +  +L+G+   R  +G L    +W H  C +    P  
Sbjct: 248 SSQVQIQMIQSQDLQLQLGTGPVLLNLRGTFHARSNLGSLMRYSYWLHTQCSISLNTPPA 307

Query: 191 GSYIPAPCTSK 200
           G+     C +K
Sbjct: 308 GTMRARRCNTK 316

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BLAST of Lcy12g013510 vs. TAIR 10
Match: AT1G13050.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G26350.1); Has 260 Blast hits to 259 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 260; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 62.4 bits (150), Expect = 4.8e-10
Identity = 47/182 (25.82%), Postives = 80/182 (43.96%), Query Frame = 0


Query: 20  AGIICAAIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLDRIRSSRTGLLEVQMKIVVR 79
           A I CA + + +I++G+++ + Y+  RPR P   ++   L+        +L   + +VV 
Sbjct: 5   ATICCAILLIVLILSGLILLLVYLANRPRSPYFDISAATLNTANLDMGYVLNGDLAVVVN 64

Query: 80  AENQNARAHASFSQTDFVLIFDGIEIASLVAH-RPFKVNKMSYLDLHFLVESSAIPLSST 139
             N + ++   FS   F L F    IA+   H  PF V K   +   F + SS + +   
Sbjct: 65  FTNPSKKSSVDFSYVMFELYFYNTLIAT--EHIEPFIVPKGMSMFTSFHLVSSQVQIQMI 124

Query: 140 QMQHLSWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCHLNCHLRF-YPRNGSYIPAPCT 199
           Q Q L   L    +  +L+G+   R  +G L    +W H  C +    P  G+     C 
Sbjct: 125 QSQDLQLQLGTGPVLLNLRGTFHARSNLGSLMRYSYWLHTQCSISLNTPPAGTMRARRCN 184

The following BLAST results are available for this feature:

BLAST of Lcy12g013510 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy12g013510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FL61	2.4e-105	95.52	uncharacterized protein LOC111446247 OS=Cucurbita moschata OX=3662 GN=LOC1114462...	[more]
A0A5D3BSN8	2.9e-103	93.03	NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A0A0L1I9	3.2e-102	92.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G242860 PE=4 SV=1	[more]
A0A6J1C199	7.1e-102	93.03	uncharacterized protein LOC111007456 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A6J1FEV3	9.3e-102	93.03	uncharacterized protein LOC111443437 OS=Cucurbita moschata OX=3662 GN=LOC1114434...	[more]

BLAST of Lcy12g013510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022940744.1	4.9e-105	95.52	uncharacterized protein LOC111446247 [Cucurbita moschata] >KAG6608016.1 hypothet...	[more]
XP_038896622.1	8.3e-105	94.53	uncharacterized protein LOC120084885 [Benincasa hispida]	[more]
KAA0052257.1	5.9e-103	93.03	NDR1/HIN1-like protein 12 [Cucumis melo var. makuwa] >TYK01822.1 NDR1/HIN1-like ...	[more]
KGN53998.2	6.6e-102	92.04	hypothetical protein Csa_011831 [Cucumis sativus]	[more]
XP_022135525.1	1.5e-101	93.03	uncharacterized protein LOC111007456 [Momordica charantia]	[more]

BLAST of Lcy12g013510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G45320.1	1.6e-50	51.56	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT1G13050.1	4.4e-11	25.65	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G13050.2	4.8e-10	25.82	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31852:SF9	LATE EMBRYOGENESIS ABUNDANT PROTEIN	coord: 9..200
None	No IPR available	PANTHER	PTHR31852	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 9..200

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy12g013510.1	Lcy12g013510.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0006898	receptor-mediated endocytosis
cellular_component	GO:0030124	AP-4 adaptor complex
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0140312	cargo adaptor activity