Lcy12g011740 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy12g011740
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	mediator-associated protein 2
Location	Chr12: 39249129 .. 39252627 (+)
RNA-Seq Expression	Lcy12g011740
Synteny	Lcy12g011740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAAACCCCTTCACCTTCCTCGCACTCTCACGTGCTGCATTCTTCTTCCCGCCGGCTCCTCCTCCCTTTCTCAGTGTCGCCACCACCGCCGTCGCCTCTCTCCCATTCAGTGCTGCTGCCGCGGTCGACTTTCATCCGCTCGAGCCACCGCAGGCTCCCTCCTCTTCTTGTTACTGGTATTCTCTCAATCTCCATCTGCACTTGAAAAACTCGAATGAGGACTTTTCTAATGAAAGAAAGGAGGAGTTGTTTTGATTTCCCCCCCCCCCCCCCCCAACAACAGTGGAATAGCAACGAAAAGGAAATCAGCCCTGCGGCAAATTGGGATTTCTCGAACTGCCGTGTGCTTTCCTTTTGATTTCTTGCATATGTCTGTTATTTGTGGCTTTGATCATCTATATATATATCTCAAGGTCTCTGCTGAAATTGCATTGTTCCTGGCTCCCAAAATCTTCCAAAGCACCACCCACCATGAATTTTCCAGCATCTCCATTCTTCGTTATTATCTAGAATCAGGCAAAGTAATCTATCGTCAACCAAATTTCCCTAACAAACATAAAGTCACAAATATATAATTAAAATAGTCTAGCCAATTTTCTTTCGGAAACTTACACCTCCATGGCTAGTTGTTTCTGGCTCCTCTTGCAAAGCGCACCCGCAGCTCAATGGATACCCTTATAACTAGAGAGAATGCTAAATGCTAAAAATAATAAATGAAGCAAAATATAATCGGGTTACTCAAATTAAGAAGTATAACCGGATCATCGTATCCGGGCCTGCTGTTTCTCTTGTAAAGTGCATAATCTTTTCTCTCAACAGAACCTAATTGGAGTCTCTCTCATTTCGTCCTGTTTCTTCTCAGCATTACTTTCTTACTCTCTAGTAAAAACTGCACATTTTTTTTTTCGGTTTCTACAGGCTGAAGCTAAGGTTTTTCTTTCCCTCCTCTCTGGGCACTTATCTGAACGTTTTCTTTGGTTATTTTGTTATTACCCATCTAGATTTTTTAGTTAAATTTAAAACAAAGTAAAAGAATTGCGTTAGTCTGTTTTTCATGTGGGAACCAAGTTTGTTTTTGGTACGTCTCATCGGAGCATTGAAAGAAAACATTTGAATGAAGCTGTTTGCATGTGAACTGTTCGACAAAATGCCCAATTGGAGTTTTGATTGGTTACGTGTTTTTGCATTTATTTTTCATTCCGTTGTTTGATATCGGAGTGTTTGTTTTGCTATTTGTTGGTGTAAGGATTTAATTACCTGTGAGTATGAGCAACGAGGTTGATGCTTTTAAAAGTGTAGAAGGCTACAAACCCCCACCAGAGTTTGAGGAAGACGAAAGGGAATTGCTTACTGATATTTCTTTGTCTGACTCTGCAGAGCTTTGGCTTATTCAATGGCCTGCTAACCAAGTAAGATCTTATGAACTAATGTAGGAAAGTAGAATAACTGCCTGCAATTTGGGAGAAATAAAAATGATGAAAAGCCCCCAAGTGTTCTCTCTTTCAAAATTGAAGTTTGTTGCAGCCATTGCGAATTTGCAAATGCTGTCTAACTTGCGAGGGATTTATTCTTTTTCTTCAATGGGTATTGTAGGCCCCGGATTTTGATGGGCAAGAATTTTCTCTCCAACTTCATCCGGATGGACATTTGGGCAGCTTTCAGGGTTCATCGGGTAATTATAACTTTATCAATTATTTACCCTGCGGACAATCTGATCTTAACAACCTTTTTTCTTGGTTCGTTGAATAATCTATTATCAGTTATTCAAAGAAGGCTCGTGTGAATATGCTTGAAATATTTTTGTTTGAATGTGAACTGCATCTATTCTGTTTGTTTTCTTTTTACAACAATTTCAATTTTTTCTTTGTTTCCATCAAAAGGAAAATCATATGATGTGGTCAGCTGTGTGGCTCAAGAACCCGAGGCTTCTGTTTTTCTACAATCTTCATCAGACACCAGATTAGGTAAATGCCCTTGTTTCTGTTAGAGCAAAATTATCTTTATTCTAAATTTGTTTACTTGACATGTTAGTATCAGTCTCTTCATTGCCGTTACATTCTCTCTCTCCTTTTTCTGTACTTAATCTGTGTCAGCCCTGTTTTCCTTCCGAGCTTTGGTTTCAGAGTTCCTATATTCTAGATTAGGAGATGGTAGTTTCACTTTTAATACTAATGTTGTTAATGCCTAGATTTCTAGCTTCTTCTTCATCCTCAATGAATGGATTCTGTATGTTTTCACATACCAGTATGTATCGATTAGTGTGGTCTAGAGCTTTGAACTACTCCTTCCATCAGCAACGTTTGTCGTTGGTTGCTGGTTCTTCAACTACAAGTCTTAACAATTTATTAATTTGCGCCAGCCCTGCTTTCCTTCCGAGCTTCGATTTCAGATTTCCTATTTTCTAGATTAGGAGATGGTAGTTTCACTTTAATACTAATGATGTTAATGCCTAGACTTCTAGCTTCTTTTTCGTCCTCAATGAATGGATTCTGTATGTTTTCACATACCGGTATGTATCGATTAGTGTGGTCTAGAACTTTAAACTACTCCTTCCATCATCAACATCTGTCGTTGGTTGCTAGTTCTCCAACTACAAGTCTTAACAATTTATTAGCCAGTTCATATGCTATCACTTCATTCAACTTTCTGCCATGTCTAAATGCGTTGGGATACAAACGAACAATGTTGGTACTTTATGCATCTCAATTCAATTCCAATGTCTCTTAGATGTTTGTTTACATCACATCATATTCTAGTTGCATGATCCCCTATTGTACGAGTAGATTAACCATTCATTTTAATATCAATTCATCTTCCCTTGATAAAATTCTTCTGTGTTTTGATTTGTCCTTCTACCCCTGAAGTTGGAAAGATTGCTCGACGGATATCTCTCGTGCATTACCCAGAACCTGAAGAACTCGAAAAGGCCACCCCTATTAAATCAGTGTATCAAAAATCTTCTGGAATTTCATTGACCTCTTCATCTCGCCAAACTACAACATCCCGAGGCCCACACTCGAGCAGTAGAAGAACAAGCTCTAGCCGAAGTAGTAAACCAAGAAGTTCAGTATCTGAATTTGAGGAACCACCAAAGCCTTCAAGTGTTAAACAGGAACCAGAACCTTCCGAGTCCAGAGATCATCTGAAAAAGGATTCATCAAAAAGAAAACGCACACACGAACCTAGTAGATCAATCGACCACTCGACTCAAGATTCAGGACGAGGTCATAGTGCAGTAACTTTTTCAGGATCCTCTGGCCGATCCAGTGAAGGTAAAACGAAAAAGCAAAAGAAATGAATGAGGCTTCTGCAAACTTGAAGTGTTCATTAGTTTTTGACAGGTCACTAAAGTAGGTTTGTACTCTTATTTCCCAGTTTTCTTTGCTTGGATTAGTTTTGAGCAGTTGTTTTATGTCATGGGAAATTCTCCCTCTGATCAGATATATGCTATAATGAATACTTAATGAAGATATTGTTAATTATGAATTAATAGTAAATA

mRNA sequence

CTAAACCCCTTCACCTTCCTCGCACTCTCACGTGCTGCATTCTTCTTCCCGCCGGCTCCTCCTCCCTTTCTCAGTGTCGCCACCACCGCCGTCGCCTCTCTCCCATTCAGTGCTGCTGCCGCGGTCGACTTTCATCCGCTCGAGCCACCGCAGGCTCCCTCCTCTTCTTGTTACTGGATTTAATTACCTGTGAGTATGAGCAACGAGGTTGATGCTTTTAAAAGTGTAGAAGGCTACAAACCCCCACCAGAGTTTGAGGAAGACGAAAGGGAATTGCTTACTGATATTTCTTTGTCTGACTCTGCAGAGCTTTGGCTTATTCAATGGCCTGCTAACCAAGCCCCGGATTTTGATGGGCAAGAATTTTCTCTCCAACTTCATCCGGATGGACATTTGGGCAGCTTTCAGGGTTCATCGGGAAAATCATATGATGTGGTCAGCTGTGTGGCTCAAGAACCCGAGGCTTCTGTTTTTCTACAATCTTCATCAGACACCAGATTAGTTGGAAAGATTGCTCGACGGATATCTCTCGTGCATTACCCAGAACCTGAAGAACTCGAAAAGGCCACCCCTATTAAATCAGTGTATCAAAAATCTTCTGGAATTTCATTGACCTCTTCATCTCGCCAAACTACAACATCCCGAGGCCCACACTCGAGCAGTAGAAGAACAAGCTCTAGCCGAAGTAGTAAACCAAGAAGTTCAGTATCTGAATTTGAGGAACCACCAAAGCCTTCAAGTGTTAAACAGGAACCAGAACCTTCCGAGTCCAGAGATCATCTGAAAAAGGATTCATCAAAAAGAAAACGCACACACGAACCTAGTAGATCAATCGACCACTCGACTCAAGATTCAGGACGAGGTCATAGTGCAGTAACTTTTTCAGGATCCTCTGGCCGATCCAGTGAAGGTAAAACGAAAAAGCAAAAGAAATGAATGAGGCTTCTGCAAACTTGAAGTGTTCATTAGTTTTTGACAGGTCACTAAAGTAGGTTTGTACTCTTATTTCCCAGTTTTCTTTGCTTGGATTAGTTTTGAGCAGTTGTTTTATGTCATGGGAAATTCTCCCTCTGATCAGATATATGCTATAATGAATACTTAATGAAGATATTGTTAATTATGAATTAATAGTAAATA

Coding sequence (CDS)

ATGAGCAACGAGGTTGATGCTTTTAAAAGTGTAGAAGGCTACAAACCCCCACCAGAGTTTGAGGAAGACGAAAGGGAATTGCTTACTGATATTTCTTTGTCTGACTCTGCAGAGCTTTGGCTTATTCAATGGCCTGCTAACCAAGCCCCGGATTTTGATGGGCAAGAATTTTCTCTCCAACTTCATCCGGATGGACATTTGGGCAGCTTTCAGGGTTCATCGGGAAAATCATATGATGTGGTCAGCTGTGTGGCTCAAGAACCCGAGGCTTCTGTTTTTCTACAATCTTCATCAGACACCAGATTAGTTGGAAAGATTGCTCGACGGATATCTCTCGTGCATTACCCAGAACCTGAAGAACTCGAAAAGGCCACCCCTATTAAATCAGTGTATCAAAAATCTTCTGGAATTTCATTGACCTCTTCATCTCGCCAAACTACAACATCCCGAGGCCCACACTCGAGCAGTAGAAGAACAAGCTCTAGCCGAAGTAGTAAACCAAGAAGTTCAGTATCTGAATTTGAGGAACCACCAAAGCCTTCAAGTGTTAAACAGGAACCAGAACCTTCCGAGTCCAGAGATCATCTGAAAAAGGATTCATCAAAAAGAAAACGCACACACGAACCTAGTAGATCAATCGACCACTCGACTCAAGATTCAGGACGAGGTCATAGTGCAGTAACTTTTTCAGGATCCTCTGGCCGATCCAGTGAAGGTAAAACGAAAAAGCAAAAGAAATGA

Protein sequence

MSNEVDAFKSVEGYKPPPEFEEDERELLTDISLSDSAELWLIQWPANQAPDFDGQEFSLQLHPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLQSSSDTRLVGKIARRISLVHYPEPEELEKATPIKSVYQKSSGISLTSSSRQTTTSRGPHSSSRRTSSSRSSKPRSSVSEFEEPPKPSSVKQEPEPSESRDHLKKDSSKRKRTHEPSRSIDHSTQDSGRGHSAVTFSGSSGRSSEGKTKKQKK

Homology

[Close]

BLAST of Lcy12g011740 vs. ExPASy Swiss-Prot
Match: F4KF27 (Mediator-associated protein 2 OS=Arabidopsis thaliana OX=3702 GN=At5g64680 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 4.0e-11
Identity = 79/242 (32.64%), Postives = 117/242 (48.35%), Query Frame = 0


Query: 14  YKPPPEFEEDERELLTDISLSDSAELWLIQWPANQAPDFDGQEFSLQLHPDGHLGSFQGS 73
           +K   +F     E L D  L+ S E WLIQ P  Q P+ +     ++   DG  G F+ S
Sbjct: 5   FKVSGDFIVSGAEQLDDTDLTRSDEFWLIQAPLGQFPEIEENTLKIEPDKDGLFGEFKDS 64

Query: 74  S--------GKSYDVVSCVAQEPEASVFLQSSSDTRLVGKIARRISLVHYPEPEELEKAT 133
           +        G  YD+ S  +Q+  A + +  S ++ +VGKI RR++LV YPEP EL +  
Sbjct: 65  NAGSLHLCLGAKYDLASFHSQDAGAELII-PSEESMIVGKITRRVALVRYPEPNELLQKM 124

Query: 134 PIKSVYQKSSGISLTSSSRQTTTSRGPHSSSRRTSSSRSSKPRSSVSEFEEPPKPSSVKQ 193
             ++  QK  G S+T+SS++++       SSR  S +RSS+ +S  S F E PK      
Sbjct: 125 KART-QQKLVG-SVTNSSKKSSNLT---QSSRHKSGTRSSREKSMFSGFTETPK------ 184

Query: 194 EPEPSESRDHLKKDSSKRKRTHEPSRSIDHSTQDSGRGHSAV-TFSGSSGRSSEGKTKKQ 247
                         S KRK          +S   SG+  S+  T SGSS RS++ K K +
Sbjct: 185 --------------SPKRK----------NSESSSGKHRSSTSTVSGSSERSAKSKKKVK 210

[Close]

BLAST of Lcy12g011740 vs. ExPASy TrEMBL
Match: A0A0A0L047 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G629490 PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 2.1e-103
Identity = 213/247 (86.23%), Postives = 230/247 (93.12%), Query Frame = 0


Query: 1   MSNEVDAFKSVEGYKPPPEFEEDERELLTDISLSDSAELWLIQWPANQAPDFDGQEFSLQ 60
           MS+EVDA K+VEGYKPP EFEED+RE LTDISL+DS ELWLIQWPANQAPDFDGQEFSLQ
Sbjct: 1   MSSEVDALKNVEGYKPPAEFEEDKREFLTDISLTDSEELWLIQWPANQAPDFDGQEFSLQ 60

Query: 61  LHPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLQSSSDTRLVGKIARRISLVHYPEPEE 120
           LHPDGH+GSFQGSSGKSYDV+SCVAQEPEASVFL SSSDTRLVGKI+RRISLVHYPEPEE
Sbjct: 61  LHPDGHMGSFQGSSGKSYDVISCVAQEPEASVFLPSSSDTRLVGKISRRISLVHYPEPEE 120

Query: 121 LEKAT-PIKSVYQKSSGISLTSSSRQTTTSRGPHSSSRRTSSSRSSKPRSSVSEFEEPPK 180
           LEKAT P+KS+YQKSSGISLT +SRQTTTSRGPHSSSRRT+SSRSSKPRSSVSEF EP K
Sbjct: 121 LEKATIPLKSLYQKSSGISLT-NSRQTTTSRGPHSSSRRTTSSRSSKPRSSVSEFTEPSK 180

Query: 181 PSSVKQEPEPSESRDHLKKDSSKRKRTHEPSRSIDHSTQDSGRGHSAVTFSGSSGRSSEG 240
            SSVKQE E +ESRDH +KDSSKRKR HEPSRSIDHST+DSG G+SAVT SGS+ RSSEG
Sbjct: 181 TSSVKQELESTESRDHKRKDSSKRKRLHEPSRSIDHSTRDSGHGNSAVTSSGSAERSSEG 240

Query: 241 KTKKQKK 247
           K+KKQKK
Sbjct: 241 KSKKQKK 246

[Close]

BLAST of Lcy12g011740 vs. ExPASy TrEMBL
Match: A0A5A7VNG7 (Mediator-associated protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001600 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 6.6e-102
Identity = 212/247 (85.83%), Postives = 228/247 (92.31%), Query Frame = 0


Query: 1   MSNEVDAFKSVEGYKPPPEFEEDERELLTDISLSDSAELWLIQWPANQAPDFDGQEFSLQ 60
           MS+EVDA K+VEGYKPP EFEED RE LTDISL+DS ELWLIQWPANQAPDFDGQEFSLQ
Sbjct: 1   MSSEVDALKNVEGYKPPAEFEEDRREFLTDISLTDSEELWLIQWPANQAPDFDGQEFSLQ 60

Query: 61  LHPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLQSSSDTRLVGKIARRISLVHYPEPEE 120
           LHPDGH+GSFQGSSGKSYDV+SCVAQEPEASVFL SSSDTRLVGKI+RRISLVHYPEPEE
Sbjct: 61  LHPDGHMGSFQGSSGKSYDVISCVAQEPEASVFLPSSSDTRLVGKISRRISLVHYPEPEE 120

Query: 121 LEKA-TPIKSVYQKSSGISLTSSSRQTTTSRGPHSSSRRTSSSRSSKPRSSVSEFEEPPK 180
           LEKA T +KS+ QKSSGISLT +SRQTTTSRGP SSSRRT+SSRSSKPRSSVSEFEEP K
Sbjct: 121 LEKATTSLKSLCQKSSGISLT-NSRQTTTSRGPQSSSRRTTSSRSSKPRSSVSEFEEPWK 180

Query: 181 PSSVKQEPEPSESRDHLKKDSSKRKRTHEPSRSIDHSTQDSGRGHSAVTFSGSSGRSSEG 240
           PSSVKQE + +ESRDH KKDSSKRKR+HEPSRSIDHST+DSG  HSAVT SGS+ RSSEG
Sbjct: 181 PSSVKQELKSTESRDHQKKDSSKRKRSHEPSRSIDHSTRDSGHSHSAVTSSGSAERSSEG 240

Query: 241 KTKKQKK 247
           K+KKQKK
Sbjct: 241 KSKKQKK 246

[Close]

BLAST of Lcy12g011740 vs. ExPASy TrEMBL
Match: A0A1S3CLF4 (mediator-associated protein 2 OS=Cucumis melo OX=3656 GN=LOC103501782 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 6.6e-102
Identity = 212/247 (85.83%), Postives = 228/247 (92.31%), Query Frame = 0


Query: 1   MSNEVDAFKSVEGYKPPPEFEEDERELLTDISLSDSAELWLIQWPANQAPDFDGQEFSLQ 60
           MS+EVDA K+VEGYKPP EFEED RE LTDISL+DS ELWLIQWPANQAPDFDGQEFSLQ
Sbjct: 1   MSSEVDALKNVEGYKPPAEFEEDRREFLTDISLTDSEELWLIQWPANQAPDFDGQEFSLQ 60

Query: 61  LHPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLQSSSDTRLVGKIARRISLVHYPEPEE 120
           LHPDGH+GSFQGSSGKSYDV+SCVAQEPEASVFL SSSDTRLVGKI+RRISLVHYPEPEE
Sbjct: 61  LHPDGHMGSFQGSSGKSYDVISCVAQEPEASVFLPSSSDTRLVGKISRRISLVHYPEPEE 120

Query: 121 LEKA-TPIKSVYQKSSGISLTSSSRQTTTSRGPHSSSRRTSSSRSSKPRSSVSEFEEPPK 180
           LEKA T +KS+ QKSSGISLT +SRQTTTSRGP SSSRRT+SSRSSKPRSSVSEFEEP K
Sbjct: 121 LEKATTSLKSLCQKSSGISLT-NSRQTTTSRGPQSSSRRTTSSRSSKPRSSVSEFEEPWK 180

Query: 181 PSSVKQEPEPSESRDHLKKDSSKRKRTHEPSRSIDHSTQDSGRGHSAVTFSGSSGRSSEG 240
           PSSVKQE + +ESRDH KKDSSKRKR+HEPSRSIDHST+DSG  HSAVT SGS+ RSSEG
Sbjct: 181 PSSVKQELKSTESRDHQKKDSSKRKRSHEPSRSIDHSTRDSGHSHSAVTSSGSAERSSEG 240

Query: 241 KTKKQKK 247
           K+KKQKK
Sbjct: 241 KSKKQKK 246

[Close]

BLAST of Lcy12g011740 vs. ExPASy TrEMBL
Match: A0A6J1J1C8 (LOW QUALITY PROTEIN: mediator-associated protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111480436 PE=4 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 6.2e-100
Identity = 208/247 (84.21%), Postives = 222/247 (89.88%), Query Frame = 0


Query: 1   MSNEVDAFKSVEGYKPPPEFEEDERELLTDISLSDSAELWLIQWPANQAPDFDGQEFSLQ 60
           MSN+V A KSVEGYKPPPEFEED+RE LTDISLSDS ELWLIQWPANQAPDFDGQEFSLQ
Sbjct: 1   MSNKVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ 60

Query: 61  LHPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLQSSSDTRLVGKIARRISLVHYPEPEE 120
             PDGHLGSFQGSSGKSYDVVSCVAQEPEASVFL SSSDTRLVGKIARRISLVHYPEPEE
Sbjct: 61  HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLVGKIARRISLVHYPEPEE 120

Query: 121 LEKATPIKSVYQKSSGISLTSSSRQTTTSRGPHSSSRRTSSSRSSKPRSSVSEFEEPPKP 180
           LEKATP+KSVY+KSSG+SLT+SSR TTTSRGPHSSSRRTSS+RSSKPRSS+SE  EP KP
Sbjct: 121 LEKATPMKSVYKKSSGMSLTTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKP 180

Query: 181 SSVKQEPEPSESRDHLKKDSSKRKRTHEPS-RSIDHSTQDSGRGHSAVTFSGSSGRSSEG 240
           SS+KQEPEPSESRD+LKKDSSKRKR H+PS R  +HSTQD G    A TFSG S  SSE 
Sbjct: 181 SSIKQEPEPSESRDYLKKDSSKRKRXHKPSDRPTNHSTQDEGCDPCAATFSGPSRLSSEC 240

Query: 241 KTKKQKK 247
           KTKK+K+
Sbjct: 241 KTKKKKQ 247

[Close]

BLAST of Lcy12g011740 vs. ExPASy TrEMBL
Match: A0A6J1CDR9 (mediator-associated protein 2 OS=Momordica charantia OX=3673 GN=LOC111010319 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.7e-97
Identity = 203/243 (83.54%), Postives = 217/243 (89.30%), Query Frame = 0


Query: 1   MSNEVDAFKSVEGYKPPPEFEEDERELLTDISLSDSAELWLIQWPANQAPDFDGQEFSLQ 60
           MSNE  AFK  E YKP PEFEED+RELL DISLSDS ELWLIQWPANQ PDFDGQEFSLQ
Sbjct: 1   MSNEFGAFKRAEEYKPAPEFEEDDRELLADISLSDSTELWLIQWPANQPPDFDGQEFSLQ 60

Query: 61  LHPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLQSSSDTRLVGKIARRISLVHYPEPEE 120
           LH DGHLGSFQGSSGKSYDVVSCVAQEPEASVFL SSSDT+LVGKI+RRISLVHYPEPEE
Sbjct: 61  LHHDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTKLVGKISRRISLVHYPEPEE 120

Query: 121 LEKATPIKSVYQKSSGISLTSSSRQTTTSRGPHSSSRRTSSSRSSKPRSSVSEFEEPPKP 180
           LE+AT +KS +QKSSGISLT+SSRQ TTSR PHSSSRRTS   SSKPRSSVSE+EEP KP
Sbjct: 121 LEQATAMKSAFQKSSGISLTTSSRQ-TTSRTPHSSSRRTS---SSKPRSSVSEYEEPSKP 180

Query: 181 SSVKQEPEPSESRDHLKKDSSKRKRTHEPSRSIDHSTQDSGRGHSAVTFSGSSGRSSEGK 240
           SS K+EPEPSES+DHLKKDSSKRK  HEPSRS D STQ+ GR HSAVTFSG+SG+SSEGK
Sbjct: 181 SSRKREPEPSESKDHLKKDSSKRKHAHEPSRSTDRSTQNLGRSHSAVTFSGASGQSSEGK 239

Query: 241 TKK 244
           TK+
Sbjct: 241 TKR 239

[Close]

BLAST of Lcy12g011740 vs. NCBI nr
Match: XP_038896123.1 (mediator-associated protein 2 [Benincasa hispida])

HSP 1 Score: 396.4 bits (1017), Expect = 1.9e-106
Identity = 218/246 (88.62%), Postives = 230/246 (93.50%), Query Frame = 0


Query: 1   MSNEVDAFKSVEGYKPPPEFEEDERELLTDISLSDSAELWLIQWPANQAPDFDGQEFSLQ 60
           M NEVDAF SVEGYKPP EFEED+RE LTDISLS+S ELWLIQWPANQAPDFDGQEFSLQ
Sbjct: 1   MINEVDAFISVEGYKPPAEFEEDKREFLTDISLSNSEELWLIQWPANQAPDFDGQEFSLQ 60

Query: 61  LHPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLQSSSDTRLVGKIARRISLVHYPEPEE 120
           LHPDG LGSFQGSSGKSYDVVSC+AQ PEASVFL SSSDTRLVGKI+RRISLVHYPEPEE
Sbjct: 61  LHPDGRLGSFQGSSGKSYDVVSCLAQVPEASVFLPSSSDTRLVGKISRRISLVHYPEPEE 120

Query: 121 LEKATPIKSVYQKSSGISLTSSSRQTTTSRGPHSSSRRTSSSRSSKPRSSVSEFEEPPKP 180
           LEKATP+KS+YQKSSG SLT +SRQTTTSRGPHSSSRRTSSSRSSKPRSSVSEFEEP KP
Sbjct: 121 LEKATPMKSLYQKSSGTSLT-NSRQTTTSRGPHSSSRRTSSSRSSKPRSSVSEFEEPSKP 180

Query: 181 SSVKQEPEPSESRDHLKKDSSKRKRTHEPSRSIDHSTQDSGRGHSAVTFSGSSGRSSEGK 240
           S VKQEPEP+ESRD+LKKDSSKR RTH+PSRSIDHST DSGRGHSAVT SGS+ RSSEGK
Sbjct: 181 SIVKQEPEPTESRDYLKKDSSKRNRTHDPSRSIDHSTPDSGRGHSAVTSSGSTERSSEGK 240

Query: 241 TKKQKK 247
           +KKQKK
Sbjct: 241 SKKQKK 245

[Close]

BLAST of Lcy12g011740 vs. NCBI nr
Match: XP_004146046.1 (mediator-associated protein 2 [Cucumis sativus] >XP_031740697.1 mediator-associated protein 2 [Cucumis sativus] >KGN55103.1 hypothetical protein Csa_012926 [Cucumis sativus])

HSP 1 Score: 385.2 bits (988), Expect = 4.3e-103
Identity = 213/247 (86.23%), Postives = 230/247 (93.12%), Query Frame = 0


Query: 1   MSNEVDAFKSVEGYKPPPEFEEDERELLTDISLSDSAELWLIQWPANQAPDFDGQEFSLQ 60
           MS+EVDA K+VEGYKPP EFEED+RE LTDISL+DS ELWLIQWPANQAPDFDGQEFSLQ
Sbjct: 1   MSSEVDALKNVEGYKPPAEFEEDKREFLTDISLTDSEELWLIQWPANQAPDFDGQEFSLQ 60

Query: 61  LHPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLQSSSDTRLVGKIARRISLVHYPEPEE 120
           LHPDGH+GSFQGSSGKSYDV+SCVAQEPEASVFL SSSDTRLVGKI+RRISLVHYPEPEE
Sbjct: 61  LHPDGHMGSFQGSSGKSYDVISCVAQEPEASVFLPSSSDTRLVGKISRRISLVHYPEPEE 120

Query: 121 LEKAT-PIKSVYQKSSGISLTSSSRQTTTSRGPHSSSRRTSSSRSSKPRSSVSEFEEPPK 180
           LEKAT P+KS+YQKSSGISLT +SRQTTTSRGPHSSSRRT+SSRSSKPRSSVSEF EP K
Sbjct: 121 LEKATIPLKSLYQKSSGISLT-NSRQTTTSRGPHSSSRRTTSSRSSKPRSSVSEFTEPSK 180

Query: 181 PSSVKQEPEPSESRDHLKKDSSKRKRTHEPSRSIDHSTQDSGRGHSAVTFSGSSGRSSEG 240
            SSVKQE E +ESRDH +KDSSKRKR HEPSRSIDHST+DSG G+SAVT SGS+ RSSEG
Sbjct: 181 TSSVKQELESTESRDHKRKDSSKRKRLHEPSRSIDHSTRDSGHGNSAVTSSGSAERSSEG 240

Query: 241 KTKKQKK 247
           K+KKQKK
Sbjct: 241 KSKKQKK 246

[Close]

BLAST of Lcy12g011740 vs. NCBI nr
Match: XP_008463699.1 (PREDICTED: mediator-associated protein 2 [Cucumis melo] >KAA0066809.1 mediator-associated protein 2 [Cucumis melo var. makuwa] >TYK27956.1 mediator-associated protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 380.2 bits (975), Expect = 1.4e-101
Identity = 212/247 (85.83%), Postives = 228/247 (92.31%), Query Frame = 0


Query: 1   MSNEVDAFKSVEGYKPPPEFEEDERELLTDISLSDSAELWLIQWPANQAPDFDGQEFSLQ 60
           MS+EVDA K+VEGYKPP EFEED RE LTDISL+DS ELWLIQWPANQAPDFDGQEFSLQ
Sbjct: 1   MSSEVDALKNVEGYKPPAEFEEDRREFLTDISLTDSEELWLIQWPANQAPDFDGQEFSLQ 60

Query: 61  LHPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLQSSSDTRLVGKIARRISLVHYPEPEE 120
           LHPDGH+GSFQGSSGKSYDV+SCVAQEPEASVFL SSSDTRLVGKI+RRISLVHYPEPEE
Sbjct: 61  LHPDGHMGSFQGSSGKSYDVISCVAQEPEASVFLPSSSDTRLVGKISRRISLVHYPEPEE 120

Query: 121 LEKA-TPIKSVYQKSSGISLTSSSRQTTTSRGPHSSSRRTSSSRSSKPRSSVSEFEEPPK 180
           LEKA T +KS+ QKSSGISLT +SRQTTTSRGP SSSRRT+SSRSSKPRSSVSEFEEP K
Sbjct: 121 LEKATTSLKSLCQKSSGISLT-NSRQTTTSRGPQSSSRRTTSSRSSKPRSSVSEFEEPWK 180

Query: 181 PSSVKQEPEPSESRDHLKKDSSKRKRTHEPSRSIDHSTQDSGRGHSAVTFSGSSGRSSEG 240
           PSSVKQE + +ESRDH KKDSSKRKR+HEPSRSIDHST+DSG  HSAVT SGS+ RSSEG
Sbjct: 181 PSSVKQELKSTESRDHQKKDSSKRKRSHEPSRSIDHSTRDSGHSHSAVTSSGSAERSSEG 240

Query: 241 KTKKQKK 247
           K+KKQKK
Sbjct: 241 KSKKQKK 246

[Close]

BLAST of Lcy12g011740 vs. NCBI nr
Match: XP_022981239.1 (LOW QUALITY PROTEIN: mediator-associated protein 2-like [Cucurbita maxima])

HSP 1 Score: 373.6 bits (958), Expect = 1.3e-99
Identity = 208/247 (84.21%), Postives = 222/247 (89.88%), Query Frame = 0


Query: 1   MSNEVDAFKSVEGYKPPPEFEEDERELLTDISLSDSAELWLIQWPANQAPDFDGQEFSLQ 60
           MSN+V A KSVEGYKPPPEFEED+RE LTDISLSDS ELWLIQWPANQAPDFDGQEFSLQ
Sbjct: 1   MSNKVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ 60

Query: 61  LHPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLQSSSDTRLVGKIARRISLVHYPEPEE 120
             PDGHLGSFQGSSGKSYDVVSCVAQEPEASVFL SSSDTRLVGKIARRISLVHYPEPEE
Sbjct: 61  HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLVGKIARRISLVHYPEPEE 120

Query: 121 LEKATPIKSVYQKSSGISLTSSSRQTTTSRGPHSSSRRTSSSRSSKPRSSVSEFEEPPKP 180
           LEKATP+KSVY+KSSG+SLT+SSR TTTSRGPHSSSRRTSS+RSSKPRSS+SE  EP KP
Sbjct: 121 LEKATPMKSVYKKSSGMSLTTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKP 180

Query: 181 SSVKQEPEPSESRDHLKKDSSKRKRTHEPS-RSIDHSTQDSGRGHSAVTFSGSSGRSSEG 240
           SS+KQEPEPSESRD+LKKDSSKRKR H+PS R  +HSTQD G    A TFSG S  SSE 
Sbjct: 181 SSIKQEPEPSESRDYLKKDSSKRKRXHKPSDRPTNHSTQDEGCDPCAATFSGPSRLSSEC 240

Query: 241 KTKKQKK 247
           KTKK+K+
Sbjct: 241 KTKKKKQ 247

[Close]

BLAST of Lcy12g011740 vs. NCBI nr
Match: XP_022139366.1 (mediator-associated protein 2 [Momordica charantia] >XP_022139367.1 mediator-associated protein 2 [Momordica charantia])

HSP 1 Score: 365.5 bits (937), Expect = 3.5e-97
Identity = 203/243 (83.54%), Postives = 217/243 (89.30%), Query Frame = 0


Query: 1   MSNEVDAFKSVEGYKPPPEFEEDERELLTDISLSDSAELWLIQWPANQAPDFDGQEFSLQ 60
           MSNE  AFK  E YKP PEFEED+RELL DISLSDS ELWLIQWPANQ PDFDGQEFSLQ
Sbjct: 1   MSNEFGAFKRAEEYKPAPEFEEDDRELLADISLSDSTELWLIQWPANQPPDFDGQEFSLQ 60

Query: 61  LHPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLQSSSDTRLVGKIARRISLVHYPEPEE 120
           LH DGHLGSFQGSSGKSYDVVSCVAQEPEASVFL SSSDT+LVGKI+RRISLVHYPEPEE
Sbjct: 61  LHHDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTKLVGKISRRISLVHYPEPEE 120

Query: 121 LEKATPIKSVYQKSSGISLTSSSRQTTTSRGPHSSSRRTSSSRSSKPRSSVSEFEEPPKP 180
           LE+AT +KS +QKSSGISLT+SSRQ TTSR PHSSSRRTS   SSKPRSSVSE+EEP KP
Sbjct: 121 LEQATAMKSAFQKSSGISLTTSSRQ-TTSRTPHSSSRRTS---SSKPRSSVSEYEEPSKP 180

Query: 181 SSVKQEPEPSESRDHLKKDSSKRKRTHEPSRSIDHSTQDSGRGHSAVTFSGSSGRSSEGK 240
           SS K+EPEPSES+DHLKKDSSKRK  HEPSRS D STQ+ GR HSAVTFSG+SG+SSEGK
Sbjct: 181 SSRKREPEPSESKDHLKKDSSKRKHAHEPSRSTDRSTQNLGRSHSAVTFSGASGQSSEGK 239

Query: 241 TKK 244
           TK+
Sbjct: 241 TKR 239

[Close]

BLAST of Lcy12g011740 vs. TAIR 10
Match: AT5G64680.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 114 Blast hits to 110 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 42; Fungi - 10; Plants - 37; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). )

HSP 1 Score: 77.4 bits (189), Expect = 1.8e-14
Identity = 79/234 (33.76%), Postives = 117/234 (50.00%), Query Frame = 0


Query: 14  YKPPPEFEEDERELLTDISLSDSAELWLIQWPANQAPDFDGQEFSLQLHPDGHLGSFQGS 73
           +K   +F     E L D  L+ S E WLIQ P  Q P+ +     ++   DG  G F+ S
Sbjct: 5   FKVSGDFIVSGAEQLDDTDLTRSDEFWLIQAPLGQFPEIEENTLKIEPDKDGLFGEFKDS 64

Query: 74  SGKSYDVVSCVAQEPEASVFLQSSSDTRLVGKIARRISLVHYPEPEELEKATPIKSVYQK 133
           +G  YD+ S  +Q+  A + +  S ++ +VGKI RR++LV YPEP EL +    ++  QK
Sbjct: 65  NGAKYDLASFHSQDAGAELII-PSEESMIVGKITRRVALVRYPEPNELLQKMKART-QQK 124

Query: 134 SSGISLTSSSRQTTTSRGPHSSSRRTSSSRSSKPRSSVSEFEEPPKPSSVKQEPEPSESR 193
             G S+T+SS++++       SSR  S +RSS+ +S  S F E PK              
Sbjct: 125 LVG-SVTNSSKKSSNLT---QSSRHKSGTRSSREKSMFSGFTETPK-------------- 184

Query: 194 DHLKKDSSKRKRTHEPSRSIDHSTQDSGRGHSAV-TFSGSSGRSSEGKTKKQKK 247
                 S KRK          +S   SG+  S+  T SGSS RS++ K K +K+
Sbjct: 185 ------SPKRK----------NSESSSGKHRSSTSTVSGSSERSAKSKKKVKKE 202

[Close]

BLAST of Lcy12g011740 vs. TAIR 10
Match: AT5G64680.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 77.4 bits (189), Expect = 1.8e-14
Identity = 79/234 (33.76%), Postives = 117/234 (50.00%), Query Frame = 0


Query: 14  YKPPPEFEEDERELLTDISLSDSAELWLIQWPANQAPDFDGQEFSLQLHPDGHLGSFQGS 73
           +K   +F     E L D  L+ S E WLIQ P  Q P+ +     ++   DG  G F+ S
Sbjct: 5   FKVSGDFIVSGAEQLDDTDLTRSDEFWLIQAPLGQFPEIEENTLKIEPDKDGLFGEFKDS 64

Query: 74  SGKSYDVVSCVAQEPEASVFLQSSSDTRLVGKIARRISLVHYPEPEELEKATPIKSVYQK 133
           +G  YD+ S  +Q+  A + +  S ++ +VGKI RR++LV YPEP EL +    ++  QK
Sbjct: 65  NGAKYDLASFHSQDAGAELII-PSEESMIVGKITRRVALVRYPEPNELLQKMKART-QQK 124

Query: 134 SSGISLTSSSRQTTTSRGPHSSSRRTSSSRSSKPRSSVSEFEEPPKPSSVKQEPEPSESR 193
             G S+T+SS++++       SSR  S +RSS+ +S  S F E PK              
Sbjct: 125 LVG-SVTNSSKKSSNLT---QSSRHKSGTRSSREKSMFSGFTETPK-------------- 184

Query: 194 DHLKKDSSKRKRTHEPSRSIDHSTQDSGRGHSAV-TFSGSSGRSSEGKTKKQKK 247
                 S KRK          +S   SG+  S+  T SGSS RS++ K K +K+
Sbjct: 185 ------SPKRK----------NSESSSGKHRSSTSTVSGSSERSAKSKKKVKKE 202

[Close]

BLAST of Lcy12g011740 vs. TAIR 10
Match: AT5G64680.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 53 Blast hits to 53 proteins in 20 species: Archae - 0; Bacteria - 8; Metazoa - 8; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 70.1 bits (170), Expect = 2.8e-12
Identity = 79/242 (32.64%), Postives = 117/242 (48.35%), Query Frame = 0


Query: 14  YKPPPEFEEDERELLTDISLSDSAELWLIQWPANQAPDFDGQEFSLQLHPDGHLGSFQGS 73
           +K   +F     E L D  L+ S E WLIQ P  Q P+ +     ++   DG  G F+ S
Sbjct: 5   FKVSGDFIVSGAEQLDDTDLTRSDEFWLIQAPLGQFPEIEENTLKIEPDKDGLFGEFKDS 64

Query: 74  S--------GKSYDVVSCVAQEPEASVFLQSSSDTRLVGKIARRISLVHYPEPEELEKAT 133
           +        G  YD+ S  +Q+  A + +  S ++ +VGKI RR++LV YPEP EL +  
Sbjct: 65  NAGSLHLCLGAKYDLASFHSQDAGAELII-PSEESMIVGKITRRVALVRYPEPNELLQKM 124

Query: 134 PIKSVYQKSSGISLTSSSRQTTTSRGPHSSSRRTSSSRSSKPRSSVSEFEEPPKPSSVKQ 193
             ++  QK  G S+T+SS++++       SSR  S +RSS+ +S  S F E PK      
Sbjct: 125 KART-QQKLVG-SVTNSSKKSSNLT---QSSRHKSGTRSSREKSMFSGFTETPK------ 184

Query: 194 EPEPSESRDHLKKDSSKRKRTHEPSRSIDHSTQDSGRGHSAV-TFSGSSGRSSEGKTKKQ 247
                         S KRK          +S   SG+  S+  T SGSS RS++ K K +
Sbjct: 185 --------------SPKRK----------NSESSSGKHRSSTSTVSGSSERSAKSKKKVK 210

The following BLAST results are available for this feature:

BLAST of Lcy12g011740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4KF27	4.0e-11	32.64	Mediator-associated protein 2 OS=Arabidopsis thaliana OX=3702 GN=At5g64680 PE=1 ...	[more]

BLAST of Lcy12g011740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L047	2.1e-103	86.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G629490 PE=4 SV=1	[more]
A0A5A7VNG7	6.6e-102	85.83	Mediator-associated protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3CLF4	6.6e-102	85.83	mediator-associated protein 2 OS=Cucumis melo OX=3656 GN=LOC103501782 PE=4 SV=1	[more]
A0A6J1J1C8	6.2e-100	84.21	LOW QUALITY PROTEIN: mediator-associated protein 2-like OS=Cucurbita maxima OX=3...	[more]
A0A6J1CDR9	1.7e-97	83.54	mediator-associated protein 2 OS=Momordica charantia OX=3673 GN=LOC111010319 PE=...	[more]

BLAST of Lcy12g011740 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896123.1	1.9e-106	88.62	mediator-associated protein 2 [Benincasa hispida]	[more]
XP_004146046.1	4.3e-103	86.23	mediator-associated protein 2 [Cucumis sativus] >XP_031740697.1 mediator-associa...	[more]
XP_008463699.1	1.4e-101	85.83	PREDICTED: mediator-associated protein 2 [Cucumis melo] >KAA0066809.1 mediator-a...	[more]
XP_022981239.1	1.3e-99	84.21	LOW QUALITY PROTEIN: mediator-associated protein 2-like [Cucurbita maxima]	[more]
XP_022139366.1	3.5e-97	83.54	mediator-associated protein 2 [Momordica charantia] >XP_022139367.1 mediator-ass...	[more]

BLAST of Lcy12g011740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64680.1	1.8e-14	33.76	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G64680.2	1.8e-14	33.76	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G64680.3	2.8e-12	32.64	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..218
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..168
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..246
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 219..237
IPR038823	Mediator-associated protein 2, plant	PANTHER	PTHR36407	MEDIATOR-ASSOCIATED PROTEIN 2	coord: 1..246

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy12g011740.1	Lcy12g011740.1	mRNA