Lcy12g011670 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy12g011670
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	ethylene-responsive transcription factor 4
Location	Chr12: 39196133 .. 39197578 (-)
RNA-Seq Expression	Lcy12g011670
Synteny	Lcy12g011670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGTACCAATAATAAAAGAAAATTAGTTGTGAGAGCGAGTAAATACCCAAGAGAGAGCGTAAGTCATTTTCGTGGTCTCACGCGCCAAACGGGGCTGGGACCACCCGAGTGGAAGAAACGGCGCGGCGGCCAGGCAGCGGTGGGAGGAAAGGAAGCGGTCAAACGCCTCGTTGACTGAGCTTTGAATATATTCATCACCCAAGCTTCCTTTCATTTTCTTTTTCTTTTTCCAAAGGCTGCACGGAGCACGTGCGCTGTGCGTGATTTAGACGCTCCGAAATTACTCCTTTTCTTTCTCTCTCTTCTCCTCCTATATAAACCCTCCCCTTCCCTAATTTTCCCTTCAAATTTCAATTCACATCCTTTTACTCTCTCTCTCTACAATTTTTTAAAACCTAACAGGCCCTAAAATGGCTGCCGGAAACCGCTCCACATCCGCCGCCACCGCCGCCTCTGCTGGCGTCGAGATCCGCTACAGGGGCGTCAGGAAGAGGCCATGGGGCCGTTACGCGGCGGAAATCCGGGACCCTCGGAAGAAGACCAGGGTTTGGCTTGGCACCTTCAACACGGCGGAGGAAGCGGCGCGTGCTTACGACACGGCCGCGCGTGAATTCCGAGGCGCCAATGCGAAAACCAATTTCCCCGTTCCGAACGAATTCCTCGACAACAACAACAACTTCCGTAAATCCGCTTGTAGTAGTCCGAGCGAGAGCAGCACCGTCGACTCCTCTTCCGCTCCGTCGCCGGCGCCGGATGCCGCACTCGCTCGCTTCCTCGACGGCAGCGTCCACGCGCCGGCCCTTTCCCCCCCAATTTACTTCTTCGACGCGTTCGCCCAGGCGGAGAAGATGAACGACTTTCACCGGACTGTCACTGTCGCCGTCGCCGGCGGATCGGCGAGTGACTCCGATTCGTCATCGGTAGTCGATTTCGACGATGCGCGAAAATCGCGGCCGTTGGATTTTGACCTGAATCTTCCGGCGGTGGAAGTTGCTTGAGGATCCGATTTCATTTTGATCTAATTTTCTAATTTAATATTGTCCGTAATCCATTTTTAGGTTTGAATGAAATATTCGACCAGAATGAGATTTGAAGAAAAAGAAAAAAAGATTTAAAGAGTTGGTGTTGCTGTATAGATAACCAGGAATTCCTCCTTCCACTTTTAATGAAGAGATTTGGATTTTTTTTTTTTTTAAATTTAATTTATTGGTGTGTTGTTTTGTTGAATTGGTCTTCTTTATTTAAGATAATAGGGAAGGACACGTAGGATATAGAGAGCAGATCTGGAATCGCCGGCACGAAGAACGAGAGAGCCGACTTGTCGTTTTGGGGTCTTAAAAAATTTGGTTTCCATAAATTATCCTTAGCCCGCGTCGGCCGTTGTGGGGCGGCGGCGGGCCCAGAAATTAATTGCATTCATCTTTTTTTATAACAAGAGGAGAGAGA

mRNA sequence

GAGTACCAATAATAAAAGAAAATTAGTTGTGAGAGCGAGTAAATACCCAAGAGAGAGCGTAAGTCATTTTCGTGGTCTCACGCGCCAAACGGGGCTGGGACCACCCGAGTGGAAGAAACGGCGCGGCGGCCAGGCAGCGGTGGGAGGAAAGGAAGCGGTCAAACGCCTCGTTGACTGAGCTTTGAATATATTCATCACCCAAGCTTCCTTTCATTTTCTTTTTCTTTTTCCAAAGGCTGCACGGAGCACGTGCGCTGTGCGTGATTTAGACGCTCCGAAATTACTCCTTTTCTTTCTCTCTCTTCTCCTCCTATATAAACCCTCCCCTTCCCTAATTTTCCCTTCAAATTTCAATTCACATCCTTTTACTCTCTCTCTCTACAATTTTTTAAAACCTAACAGGCCCTAAAATGGCTGCCGGAAACCGCTCCACATCCGCCGCCACCGCCGCCTCTGCTGGCGTCGAGATCCGCTACAGGGGCGTCAGGAAGAGGCCATGGGGCCGTTACGCGGCGGAAATCCGGGACCCTCGGAAGAAGACCAGGGTTTGGCTTGGCACCTTCAACACGGCGGAGGAAGCGGCGCGTGCTTACGACACGGCCGCGCGTGAATTCCGAGGCGCCAATGCGAAAACCAATTTCCCCGTTCCGAACGAATTCCTCGACAACAACAACAACTTCCGTAAATCCGCTTGTAGTAGTCCGAGCGAGAGCAGCACCGTCGACTCCTCTTCCGCTCCGTCGCCGGCGCCGGATGCCGCACTCGCTCGCTTCCTCGACGGCAGCGTCCACGCGCCGGCCCTTTCCCCCCCAATTTACTTCTTCGACGCGTTCGCCCAGGCGGAGAAGATGAACGACTTTCACCGGACTGTCACTGTCGCCGTCGCCGGCGGATCGGCGAGTGACTCCGATTCGTCATCGGTAGTCGATTTCGACGATGCGCGAAAATCGCGGCCGTTGGATTTTGACCTGAATCTTCCGGCGGTGGAAGTTGCTTGAGGATCCGATTTCATTTTGATCTAATTTTCTAATTTAATATTGTCCGTAATCCATTTTTAGGTTTGAATGAAATATTCGACCAGAATGAGATTTGAAGAAAAAGAAAAAAAGATTTAAAGAGTTGGTGTTGCTGTATAGATAACCAGGAATTCCTCCTTCCACTTTTAATGAAGAGATTTGGATTTTTTTTTTTTTTAAATTTAATTTATTGGTGTGTTGTTTTGTTGAATTGGTCTTCTTTATTTAAGATAATAGGGAAGGACACGTAGGATATAGAGAGCAGATCTGGAATCGCCGGCACGAAGAACGAGAGAGCCGACTTGTCGTTTTGGGGTCTTAAAAAATTTGGTTTCCATAAATTATCCTTAGCCCGCGTCGGCCGTTGTGGGGCGGCGGCGGGCCCAGAAATTAATTGCATTCATCTTTTTTTATAACAAGAGGAGAGAGA

Coding sequence (CDS)

ATGGCTGCCGGAAACCGCTCCACATCCGCCGCCACCGCCGCCTCTGCTGGCGTCGAGATCCGCTACAGGGGCGTCAGGAAGAGGCCATGGGGCCGTTACGCGGCGGAAATCCGGGACCCTCGGAAGAAGACCAGGGTTTGGCTTGGCACCTTCAACACGGCGGAGGAAGCGGCGCGTGCTTACGACACGGCCGCGCGTGAATTCCGAGGCGCCAATGCGAAAACCAATTTCCCCGTTCCGAACGAATTCCTCGACAACAACAACAACTTCCGTAAATCCGCTTGTAGTAGTCCGAGCGAGAGCAGCACCGTCGACTCCTCTTCCGCTCCGTCGCCGGCGCCGGATGCCGCACTCGCTCGCTTCCTCGACGGCAGCGTCCACGCGCCGGCCCTTTCCCCCCCAATTTACTTCTTCGACGCGTTCGCCCAGGCGGAGAAGATGAACGACTTTCACCGGACTGTCACTGTCGCCGTCGCCGGCGGATCGGCGAGTGACTCCGATTCGTCATCGGTAGTCGATTTCGACGATGCGCGAAAATCGCGGCCGTTGGATTTTGACCTGAATCTTCCGGCGGTGGAAGTTGCTTGA

Protein sequence

MAAGNRSTSAATAASAGVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAAREFRGANAKTNFPVPNEFLDNNNNFRKSACSSPSESSTVDSSSAPSPAPDAALARFLDGSVHAPALSPPIYFFDAFAQAEKMNDFHRTVTVAVAGGSASDSDSSSVVDFDDARKSRPLDFDLNLPAVEVA

Homology

[Close]

BLAST of Lcy12g011670 vs. ExPASy Swiss-Prot
Match: O80340 (Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=ERF4 PE=1 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.4e-35
Identity = 101/197 (51.27%), Postives = 119/197 (60.41%), Query Frame = 0


Query: 19  EIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAAREFRGANAKTNFP 78
           EIRYRGVRKRPWGRYAAEIRDP KKTRVWLGTF+TAEEAARAYDTAAR+FRGA AKTNFP
Sbjct: 22  EIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARDFRGAKAKTNFP 81

Query: 79  VPNEFLDNNNNFRKSACSSPSESSTVDSSSAPS------------PAPDAALARFLDGSV 138
              E  D           SPS+SST+D +S P+            P  + +L     GS 
Sbjct: 82  TFLELSD--QKVPTGFARSPSQSSTLDCASPPTLVVPSATAGNVPPQLELSLGGGGGGSC 141

Query: 139 HAPALSPPIYFFDAF-------AQAEKMNDFHRTVTVAVAG----GSASDSDSSSVVDFD 191
           +   +S P+YF D          Q   +    R+  V VA     G+ SDSDSSSVVDF+
Sbjct: 142 YQIPMSRPVYFLDLMGIGNVGRGQPPPVTSAFRSPVVHVATKMACGAQSDSDSSSVVDFE 201

[Close]

BLAST of Lcy12g011670 vs. ExPASy Swiss-Prot
Match: Q40477 (Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum OX=4097 GN=ERF4 PE=1 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.4e-27
Identity = 97/208 (46.63%), Postives = 113/208 (54.33%), Query Frame = 0


Query: 19  EIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAAREFRGANAKTNFP 78
           E+ YRGVRKRPWGRYAAEIRDP KK+RVWLGTF+TAEEAA+AYDTAAREFRG  AKTNFP
Sbjct: 24  EVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNFP 83

Query: 79  VPNEFLDNNNNFRKSACSSPSESSTVDSSS------APSPAP-DAALARFL--------- 138
            P E              SPS SSTV+SSS      AP  AP +  L R L         
Sbjct: 84  SPTE------------NQSPSHSSTVESSSGENGVHAPPHAPLELDLTRRLGSVAADGGD 143

Query: 139 ----DGSVHAP--------ALSP---PIYFFDAFAQAEKMN---DFHRT---VTVAVAGG 190
                G V  P        A+ P   P+  FD+  +A  +N    +H T        AG 
Sbjct: 144 NCRRSGEVGYPIFHQQPTVAVLPNGQPVLLFDSLWRAGVVNRPQPYHVTPMGFNGVNAGV 203

[Close]

BLAST of Lcy12g011670 vs. ExPASy Swiss-Prot
Match: Q9MAI5 (Ethylene-responsive transcription factor 8 OS=Arabidopsis thaliana OX=3702 GN=ERF8 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 5.4e-27
Identity = 88/182 (48.35%), Postives = 108/182 (59.34%), Query Frame = 0


Query: 14  ASAGVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAAREFRGANA 73
           ++A  EIRYRGVRKRPWGRYAAEIRDP KKTRVWLGTF+TA++AARAYD AAR+FRG  A
Sbjct: 23  SNAAKEIRYRGVRKRPWGRYAAEIRDPVKKTRVWLGTFDTAQQAARAYDAAARDFRGVKA 82

Query: 74  KTNFPVPNEFLDNNNNFRKSACSSPSESST-VDSSSAPSPAPDAALARFLDGSVHAPALS 133
           KTNF V                SSP++SST VDS +A        L   L G        
Sbjct: 83  KTNFGV-------------IVGSSPTQSSTVVDSPTAARFITPPHLELSLGGGGACRRKI 142

Query: 134 P---PIYFFDAFAQAEKMNDFHRTVTVAVAGGSASDSDSSSVVDFDD--ARKSRPLDFDL 190
           P   P+Y+++       M  + +  T     G  S+S++SSVVDF+    + S PLD DL
Sbjct: 143 PLVHPVYYYN-------MATYPKMTTC----GVQSESETSSVVDFEGGAGKISPPLDLDL 180

[Close]

BLAST of Lcy12g011670 vs. ExPASy Swiss-Prot
Match: Q9LW49 (Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris OX=4096 GN=ERF4 PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 4.5e-26
Identity = 94/210 (44.76%), Postives = 116/210 (55.24%), Query Frame = 0


Query: 19  EIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAAREFRGANAKTNFP 78
           E+ YRGVRKRPWGRYAAEIRDP KK+RVWLGTF+TAEEAA+AYDTAAREFRG  AKTNFP
Sbjct: 24  EVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNFP 83

Query: 79  VPNEFLDNNNNFRKSACSSPSESSTVDSSS------APSPAP-DAALARFL--------- 138
           +P+E              S S SST++SSS      AP  AP +  L R L         
Sbjct: 84  LPSE------------NQSTSHSSTMESSSGETGIHAPPHAPLELDLTRRLGSVAADGGD 143

Query: 139 ----DGSVHAP--------ALSP---PIYFFDAFAQAEKMN--DFHRTVTVAV------A 190
                G V  P        A+ P   P+  FD+  +   +N    +  + +A+      A
Sbjct: 144 NCRRSGEVGYPIFHQQPTVAVLPNGQPVLLFDSLWRPGVVNRPQPYHVMPMAMGFNGVNA 203

[Close]

BLAST of Lcy12g011670 vs. ExPASy Swiss-Prot
Match: Q9FE67 (Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=ERF9 PE=1 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 7.7e-26
Identity = 55/64 (85.94%), Postives = 60/64 (93.75%), Query Frame = 0


Query: 19 EIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAAREFRGANAKTNFP 78
          E+ +RGVRKRPWGRYAAEIRDP KKTRVWLGTF+TAEEAARAYDTAAREFRG+ AKTNFP
Sbjct: 30 EVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNFP 89

Query: 79 VPNE 83
          +P E
Sbjct: 90 LPGE 93

[Close]

BLAST of Lcy12g011670 vs. ExPASy TrEMBL
Match: A0A6J1IXY7 (ethylene-responsive transcription factor 4 OS=Cucurbita maxima OX=3661 GN=LOC111480939 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.6e-79
Identity = 169/198 (85.35%), Postives = 178/198 (89.90%), Query Frame = 0


Query: 1   MAAGNRSTSAATAASAGVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARA 60
           MAAG+RSTS A      VEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARA
Sbjct: 1   MAAGDRSTSTAV-----VEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARA 60

Query: 61  YDTAAREFRGANAKTNFPVPNEFL--DNNNNFRKSACSSPSESSTVDSSSAPSPAPDAAL 120
           YDTAAREFRGANAKTNFP PNE+L  DNNN FR+S CSSPSESSTVDSSSAPSP  DA+L
Sbjct: 61  YDTAAREFRGANAKTNFPTPNEYLVDDNNNKFRRSTCSSPSESSTVDSSSAPSPT-DASL 120

Query: 121 ARFLDGSVHAPALSPPIYFFDAFAQAEKMNDFHRTVTVAVAGGSASDSDSSSVVDF-DDA 180
            RFLDGS H PA+S PI+FFDAFAQAEKM+DFHRTVTVAVAGGSASDSDSSSVVDF DD+
Sbjct: 121 TRFLDGS-HPPAISRPIFFFDAFAQAEKMSDFHRTVTVAVAGGSASDSDSSSVVDFDDDS 180

Query: 181 RKSRPLDFDLNLPAVEVA 196
           +KSRP DFDLNLPAVEVA
Sbjct: 181 QKSRPFDFDLNLPAVEVA 191

[Close]

BLAST of Lcy12g011670 vs. ExPASy TrEMBL
Match: A0A6J1FTH9 (ethylene-responsive transcription factor 4 OS=Cucurbita moschata OX=3662 GN=LOC111446690 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.4e-78
Identity = 168/199 (84.42%), Postives = 179/199 (89.95%), Query Frame = 0


Query: 1   MAAGNRSTSAATAASAGVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARA 60
           MAAG+RSTS     +A VEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARA
Sbjct: 1   MAAGDRSTS-----TAAVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARA 60

Query: 61  YDTAAREFRGANAKTNFPVPNEFL---DNNNNFRKSACSSPSESSTVDSSSAPSPAPDAA 120
           YD+AAREFRGANAKTNFP PNE+L   +NNN FR+SACSSPSESSTVDSSSAPSP  DA+
Sbjct: 61  YDSAAREFRGANAKTNFPTPNEYLVDDNNNNKFRRSACSSPSESSTVDSSSAPSPT-DAS 120

Query: 121 LARFLDGSVHAPALSPPIYFFDAFAQAEKMNDFHRTVTVAVAGGSASDSDSSSVVDF-DD 180
           L RFLDGS H PA+S PI+FFDAFAQAEKMNDF RTVTVAVAGGSASDSDSSSVVDF DD
Sbjct: 121 LTRFLDGS-HPPAISRPIFFFDAFAQAEKMNDFRRTVTVAVAGGSASDSDSSSVVDFDDD 180

Query: 181 ARKSRPLDFDLNLPAVEVA 196
           ++KSRP DFDLNLPAVEVA
Sbjct: 181 SQKSRPFDFDLNLPAVEVA 192

[Close]

BLAST of Lcy12g011670 vs. ExPASy TrEMBL
Match: A0A6J1CD65 (ethylene-responsive transcription factor 4 OS=Momordica charantia OX=3673 GN=LOC111010466 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 2.4e-70
Identity = 159/201 (79.10%), Postives = 170/201 (84.58%), Query Frame = 0


Query: 1   MAAGNRSTSAATAASAGVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARA 60
           MAAG+R TS++ A +   EIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARA
Sbjct: 1   MAAGDRPTSSSAAVTP--EIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARA 60

Query: 61  YDTAAREFRGANAKTNFPVPNEF--LDNNNNFRKSACSSPSESSTVDSSSAPSPAP---D 120
           YDTAAREFRG NAKTNFPVP EF  L   N++RKSACSSPS+SSTVDSSS PSPAP   D
Sbjct: 61  YDTAAREFRGGNAKTNFPVPAEFAVLVGENHYRKSACSSPSQSSTVDSSS-PSPAPPPVD 120

Query: 121 AALARFLDGSVHAPALSPPIYFFDAFAQAEKMNDFHRTVTVAVAGGSASDSDSSS-VVDF 180
            AL  F+DG     A+S PIYFFDAFAQAEK +DFHRTVTVAVAGGSASDSDSSS VVDF
Sbjct: 121 PALTHFIDGG----AISRPIYFFDAFAQAEKTSDFHRTVTVAVAGGSASDSDSSSVVVDF 180

Query: 181 DDARKSRPLDFDLNLPAVEVA 196
           +  RK RPLDFDLNLPAVEVA
Sbjct: 181 NHTRKPRPLDFDLNLPAVEVA 194

[Close]

BLAST of Lcy12g011670 vs. ExPASy TrEMBL
Match: A0A5A7VEL4 (Ethylene-responsive transcription factor 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001630 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.7e-68
Identity = 155/198 (78.28%), Postives = 166/198 (83.84%), Query Frame = 0


Query: 1   MAAGNRSTSAATAASAGVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARA 60
           MAAG+RSTSAA   S   EIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARA
Sbjct: 1   MAAGDRSTSAAPPNSK--EIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARA 60

Query: 61  YDTAAREFRGANAKTNFPVPNEFL---DNNNNFRKSAC-SSPSESSTVDSSSAPSPAPDA 120
           YDTAAREFRGANAKTNFPV N+FL   +N+ NF KSAC SSPS SSTV+SSS PSP P  
Sbjct: 61  YDTAAREFRGANAKTNFPVQNDFLIVDNNHTNFHKSACSSSPSHSSTVESSS-PSPTPSN 120

Query: 121 ALARFLDGSVHAPALSPPIYFFDAFAQAEKMNDFHRTVTVAVAGGSASDSDSSSVVDFDD 180
               +LDG +HAP +S PI+FFDAFAQAEK++DF RTVT A AG  ASDSDSSSVVDFD 
Sbjct: 121 P---YLDGGIHAPGISRPIFFFDAFAQAEKISDFRRTVTAAAAG--ASDSDSSSVVDFDT 180

Query: 181 ARKSRPLDFDLNLPAVEV 195
            RKSRPLDFDLNLPAVEV
Sbjct: 181 TRKSRPLDFDLNLPAVEV 190

[Close]

BLAST of Lcy12g011670 vs. ExPASy TrEMBL
Match: A0A1S3CLM9 (ethylene-responsive transcription factor 4 OS=Cucumis melo OX=3656 GN=LOC103501853 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.7e-68
Identity = 155/198 (78.28%), Postives = 166/198 (83.84%), Query Frame = 0


Query: 1   MAAGNRSTSAATAASAGVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARA 60
           MAAG+RSTSAA   S   EIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARA
Sbjct: 1   MAAGDRSTSAAPPNSK--EIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARA 60

Query: 61  YDTAAREFRGANAKTNFPVPNEFL---DNNNNFRKSAC-SSPSESSTVDSSSAPSPAPDA 120
           YDTAAREFRGANAKTNFPV N+FL   +N+ NF KSAC SSPS SSTV+SSS PSP P  
Sbjct: 61  YDTAAREFRGANAKTNFPVQNDFLIVDNNHTNFHKSACSSSPSHSSTVESSS-PSPTPSN 120

Query: 121 ALARFLDGSVHAPALSPPIYFFDAFAQAEKMNDFHRTVTVAVAGGSASDSDSSSVVDFDD 180
               +LDG +HAP +S PI+FFDAFAQAEK++DF RTVT A AG  ASDSDSSSVVDFD 
Sbjct: 121 P---YLDGGIHAPGISRPIFFFDAFAQAEKISDFRRTVTAAAAG--ASDSDSSSVVDFDT 180

Query: 181 ARKSRPLDFDLNLPAVEV 195
            RKSRPLDFDLNLPAVEV
Sbjct: 181 TRKSRPLDFDLNLPAVEV 190

[Close]

BLAST of Lcy12g011670 vs. NCBI nr
Match: XP_022981946.1 (ethylene-responsive transcription factor 4 [Cucurbita maxima])

HSP 1 Score: 305.4 bits (781), Expect = 3.4e-79
Identity = 169/198 (85.35%), Postives = 178/198 (89.90%), Query Frame = 0


Query: 1   MAAGNRSTSAATAASAGVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARA 60
           MAAG+RSTS A      VEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARA
Sbjct: 1   MAAGDRSTSTAV-----VEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARA 60

Query: 61  YDTAAREFRGANAKTNFPVPNEFL--DNNNNFRKSACSSPSESSTVDSSSAPSPAPDAAL 120
           YDTAAREFRGANAKTNFP PNE+L  DNNN FR+S CSSPSESSTVDSSSAPSP  DA+L
Sbjct: 61  YDTAAREFRGANAKTNFPTPNEYLVDDNNNKFRRSTCSSPSESSTVDSSSAPSPT-DASL 120

Query: 121 ARFLDGSVHAPALSPPIYFFDAFAQAEKMNDFHRTVTVAVAGGSASDSDSSSVVDF-DDA 180
            RFLDGS H PA+S PI+FFDAFAQAEKM+DFHRTVTVAVAGGSASDSDSSSVVDF DD+
Sbjct: 121 TRFLDGS-HPPAISRPIFFFDAFAQAEKMSDFHRTVTVAVAGGSASDSDSSSVVDFDDDS 180

Query: 181 RKSRPLDFDLNLPAVEVA 196
           +KSRP DFDLNLPAVEVA
Sbjct: 181 QKSRPFDFDLNLPAVEVA 191

[Close]

BLAST of Lcy12g011670 vs. NCBI nr
Match: KAG6607891.1 (Ethylene-responsive transcription factor 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 304.7 bits (779), Expect = 5.8e-79
Identity = 169/198 (85.35%), Postives = 179/198 (90.40%), Query Frame = 0


Query: 1   MAAGNRSTSAATAASAGVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARA 60
           MAAG+RSTS     +A VEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARA
Sbjct: 1   MAAGDRSTS-----TAAVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARA 60

Query: 61  YDTAAREFRGANAKTNFPVPNEFL--DNNNNFRKSACSSPSESSTVDSSSAPSPAPDAAL 120
           YD+AAREFRGANAKTNFP PNE+L  DNNN FR+SACSSPSESSTVDSSSAPSP  DA+L
Sbjct: 61  YDSAAREFRGANAKTNFPTPNEYLVDDNNNKFRRSACSSPSESSTVDSSSAPSPT-DASL 120

Query: 121 ARFLDGSVHAPALSPPIYFFDAFAQAEKMNDFHRTVTVAVAGGSASDSDSSSVVDF-DDA 180
            RFLDGS H PA+S PI+FFDAFAQAEKMNDF RTVTVAVAGGSASDSDSSSVVDF DD+
Sbjct: 121 TRFLDGS-HPPAISRPIFFFDAFAQAEKMNDFRRTVTVAVAGGSASDSDSSSVVDFDDDS 180

Query: 181 RKSRPLDFDLNLPAVEVA 196
           +KSRP DFDLNLPAVEVA
Sbjct: 181 QKSRPFDFDLNLPAVEVA 191

[Close]

BLAST of Lcy12g011670 vs. NCBI nr
Match: XP_022941385.1 (ethylene-responsive transcription factor 4 [Cucurbita moschata] >KAG7037418.1 Ethylene-responsive transcription factor 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 302.4 bits (773), Expect = 2.9e-78
Identity = 168/199 (84.42%), Postives = 179/199 (89.95%), Query Frame = 0


Query: 1   MAAGNRSTSAATAASAGVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARA 60
           MAAG+RSTS     +A VEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARA
Sbjct: 1   MAAGDRSTS-----TAAVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARA 60

Query: 61  YDTAAREFRGANAKTNFPVPNEFL---DNNNNFRKSACSSPSESSTVDSSSAPSPAPDAA 120
           YD+AAREFRGANAKTNFP PNE+L   +NNN FR+SACSSPSESSTVDSSSAPSP  DA+
Sbjct: 61  YDSAAREFRGANAKTNFPTPNEYLVDDNNNNKFRRSACSSPSESSTVDSSSAPSPT-DAS 120

Query: 121 LARFLDGSVHAPALSPPIYFFDAFAQAEKMNDFHRTVTVAVAGGSASDSDSSSVVDF-DD 180
           L RFLDGS H PA+S PI+FFDAFAQAEKMNDF RTVTVAVAGGSASDSDSSSVVDF DD
Sbjct: 121 LTRFLDGS-HPPAISRPIFFFDAFAQAEKMNDFRRTVTVAVAGGSASDSDSSSVVDFDDD 180

Query: 181 ARKSRPLDFDLNLPAVEVA 196
           ++KSRP DFDLNLPAVEVA
Sbjct: 181 SQKSRPFDFDLNLPAVEVA 192

[Close]

BLAST of Lcy12g011670 vs. NCBI nr
Match: XP_023525528.1 (ethylene-responsive transcription factor 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 298.5 bits (763), Expect = 4.2e-77
Identity = 167/199 (83.92%), Postives = 177/199 (88.94%), Query Frame = 0


Query: 1   MAAGNRSTSAATAASAGVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARA 60
           MAAG RSTS     +A VEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARA
Sbjct: 1   MAAGLRSTS-----TAAVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARA 60

Query: 61  YDTAAREFRGANAKTNFPVPNEFL---DNNNNFRKSACSSPSESSTVDSSSAPSPAPDAA 120
           YD AAREFRGANAKTNFP PNE+L   +NNN FR+SACSSPSESSTVDSSSAPSP  DA+
Sbjct: 61  YDAAAREFRGANAKTNFPTPNEYLIDDNNNNKFRRSACSSPSESSTVDSSSAPSPT-DAS 120

Query: 121 LARFLDGSVHAPALSPPIYFFDAFAQAEKMNDFHRTVTVAVAGGSASDSDSSSVVDF-DD 180
           L RFLDGS H PA+S PI+FFDAFAQAEKM+DF RTVTVAVAGGSASDSDSSSVVDF DD
Sbjct: 121 LTRFLDGS-HPPAISRPIFFFDAFAQAEKMSDFRRTVTVAVAGGSASDSDSSSVVDFDDD 180

Query: 181 ARKSRPLDFDLNLPAVEVA 196
           ++KSRP DFDLNLPAVEVA
Sbjct: 181 SQKSRPFDFDLNLPAVEVA 192

[Close]

BLAST of Lcy12g011670 vs. NCBI nr
Match: XP_038897001.1 (ethylene-responsive transcription factor 4 [Benincasa hispida])

HSP 1 Score: 278.5 bits (711), Expect = 4.5e-71
Identity = 159/202 (78.71%), Postives = 172/202 (85.15%), Query Frame = 0


Query: 1   MAAGNRSTSAATAASA--GVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA 60
           M AG+RSTS A+ A+     EIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA
Sbjct: 1   MVAGDRSTSTASTAAPPNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA 60

Query: 61  RAYDTAAREFRGANAKTNFPVPNEFL--DNNNNFRKSACS-SPSESSTVDSSSAPSPAP- 120
           RAYDTAAREFRGANAKTNFP+ NEFL  DNNNNF KSACS SPS+SSTVDSSS PSPAP 
Sbjct: 61  RAYDTAAREFRGANAKTNFPIQNEFLMVDNNNNFHKSACSTSPSQSSTVDSSS-PSPAPS 120

Query: 121 DAALARFLDGSVHAPALSPPIYFFDAFAQAEKMNDFHRTVT--VAVAGGSASDSDSSSVV 180
           D +L  FL+ S HAP +S PI+FFDAFAQAE++++F R VT  VA AGGS SDSDSSSVV
Sbjct: 121 DPSLTHFLNSSNHAPTISRPIFFFDAFAQAERISEFRRNVTNAVAGAGGSVSDSDSSSVV 180

Query: 181 DFDDARKSRPLDFDLNLPAVEV 195
           DFD  RKSRPLDFDLNLPAVEV
Sbjct: 181 DFDTTRKSRPLDFDLNLPAVEV 201

[Close]

BLAST of Lcy12g011670 vs. TAIR 10
Match: AT3G15210.1 (ethylene responsive element binding factor 4 )

HSP 1 Score: 151.0 bits (380), Expect = 1.0e-36
Identity = 101/197 (51.27%), Postives = 119/197 (60.41%), Query Frame = 0


Query: 19  EIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAAREFRGANAKTNFP 78
           EIRYRGVRKRPWGRYAAEIRDP KKTRVWLGTF+TAEEAARAYDTAAR+FRGA AKTNFP
Sbjct: 22  EIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARDFRGAKAKTNFP 81

Query: 79  VPNEFLDNNNNFRKSACSSPSESSTVDSSSAPS------------PAPDAALARFLDGSV 138
              E  D           SPS+SST+D +S P+            P  + +L     GS 
Sbjct: 82  TFLELSD--QKVPTGFARSPSQSSTLDCASPPTLVVPSATAGNVPPQLELSLGGGGGGSC 141

Query: 139 HAPALSPPIYFFDAF-------AQAEKMNDFHRTVTVAVAG----GSASDSDSSSVVDFD 191
           +   +S P+YF D          Q   +    R+  V VA     G+ SDSDSSSVVDF+
Sbjct: 142 YQIPMSRPVYFLDLMGIGNVGRGQPPPVTSAFRSPVVHVATKMACGAQSDSDSSSVVDFE 201

[Close]

BLAST of Lcy12g011670 vs. TAIR 10
Match: AT1G53170.1 (ethylene response factor 8 )

HSP 1 Score: 122.5 bits (306), Expect = 3.8e-28
Identity = 88/182 (48.35%), Postives = 108/182 (59.34%), Query Frame = 0


Query: 14  ASAGVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAAREFRGANA 73
           ++A  EIRYRGVRKRPWGRYAAEIRDP KKTRVWLGTF+TA++AARAYD AAR+FRG  A
Sbjct: 23  SNAAKEIRYRGVRKRPWGRYAAEIRDPVKKTRVWLGTFDTAQQAARAYDAAARDFRGVKA 82

Query: 74  KTNFPVPNEFLDNNNNFRKSACSSPSESST-VDSSSAPSPAPDAALARFLDGSVHAPALS 133
           KTNF V                SSP++SST VDS +A        L   L G        
Sbjct: 83  KTNFGV-------------IVGSSPTQSSTVVDSPTAARFITPPHLELSLGGGGACRRKI 142

Query: 134 P---PIYFFDAFAQAEKMNDFHRTVTVAVAGGSASDSDSSSVVDFDD--ARKSRPLDFDL 190
           P   P+Y+++       M  + +  T     G  S+S++SSVVDF+    + S PLD DL
Sbjct: 143 PLVHPVYYYN-------MATYPKMTTC----GVQSESETSSVVDFEGGAGKISPPLDLDL 180

[Close]

BLAST of Lcy12g011670 vs. TAIR 10
Match: AT5G44210.1 (erf domain protein 9 )

HSP 1 Score: 118.6 bits (296), Expect = 5.5e-27
Identity = 55/64 (85.94%), Postives = 60/64 (93.75%), Query Frame = 0


Query: 19 EIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAAREFRGANAKTNFP 78
          E+ +RGVRKRPWGRYAAEIRDP KKTRVWLGTF+TAEEAARAYDTAAREFRG+ AKTNFP
Sbjct: 30 EVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNFP 89

Query: 79 VPNE 83
          +P E
Sbjct: 90 LPGE 93

[Close]

BLAST of Lcy12g011670 vs. TAIR 10
Match: AT3G20310.1 (ethylene response factor 7 )

HSP 1 Score: 111.3 bits (277), Expect = 8.8e-25
Identity = 88/227 (38.77%), Postives = 110/227 (48.46%), Query Frame = 0


Query: 12  TAASAGVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAAREFRGA 71
           TA  +  E RYRGVRKRPWGR+AAEIRDP KK+RVWLGTF++A +AARAYDTAAR  RG 
Sbjct: 17  TAGGSVKEPRYRGVRKRPWGRFAAEIRDPLKKSRVWLGTFDSAVDAARAYDTAARNLRGP 76

Query: 72  NAKTNFPV---------PNEFLDNNN-----------------------NFRK------- 131
            AKTNFP+         P  +L N N                       NF++       
Sbjct: 77  KAKTNFPIDCSPSSPLQPLTYLHNQNLCSPPVIQNQIDPFMDHRLYGGGNFQEQQQQQII 136

Query: 132 SACSSPSESSTVDSSSAPSPAPDAALARFLDGSVHAPALSPPIYFFDAFAQAEKMNDFHR 191
           S  +S S SSTV S S P P   AA +  +   +HA                  +  + R
Sbjct: 137 SRPASSSMSSTVKSCSGPRPMEAAAASSSVAKPLHA------------------IKRYPR 196

Query: 192 TVTVAVAGGSASDSDSSSVVDFDD------ARKSRPLDFDLNLPAVE 194
           T  VA     +    SSSV+D  D      +R+  P  FDLN P ++
Sbjct: 197 TPPVAPEDCHSDCDSSSSVIDDGDDIASSSSRRKTPFQFDLNFPPLD 225

[Close]

BLAST of Lcy12g011670 vs. TAIR 10
Match: AT1G28370.1 (ERF domain protein 11 )

HSP 1 Score: 108.6 bits (270), Expect = 5.7e-24
Identity = 64/99 (64.65%), Postives = 71/99 (71.72%), Query Frame = 0


Query: 9   SAATAASAGVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAAREF 68
           +AA   + G  +RYRGVRKRPWGRYAAEIRDP KK+RVWLGTF+T EEAARAYD  A EF
Sbjct: 7   TAAVKTNEGNGVRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDKRAIEF 66

Query: 69  RGANAKTNFPVPNEFLDNNNNFRKSACSSPSESSTVDSS 108
           RGA AKTNFP       N N    S   S S+SSTV+SS
Sbjct: 67  RGAKAKTNFP-----CYNINAHCLSLTQSLSQSSTVESS 100

The following BLAST results are available for this feature:

BLAST of Lcy12g011670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80340	1.4e-35	51.27	Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
Q40477	2.4e-27	46.63	Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum OX=4097 GN=ERF4 ...	[more]
Q9MAI5	5.4e-27	48.35	Ethylene-responsive transcription factor 8 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
Q9LW49	4.5e-26	44.76	Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris OX=4096 GN=ER...	[more]
Q9FE67	7.7e-26	85.94	Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]

BLAST of Lcy12g011670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IXY7	1.6e-79	85.35	ethylene-responsive transcription factor 4 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1FTH9	1.4e-78	84.42	ethylene-responsive transcription factor 4 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1CD65	2.4e-70	79.10	ethylene-responsive transcription factor 4 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A5A7VEL4	1.7e-68	78.28	Ethylene-responsive transcription factor 4 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3CLM9	1.7e-68	78.28	ethylene-responsive transcription factor 4 OS=Cucumis melo OX=3656 GN=LOC1035018...	[more]

BLAST of Lcy12g011670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022981946.1	3.4e-79	85.35	ethylene-responsive transcription factor 4 [Cucurbita maxima]	[more]
KAG6607891.1	5.8e-79	85.35	Ethylene-responsive transcription factor 4, partial [Cucurbita argyrosperma subs...	[more]
XP_022941385.1	2.9e-78	84.42	ethylene-responsive transcription factor 4 [Cucurbita moschata] >KAG7037418.1 Et...	[more]
XP_023525528.1	4.2e-77	83.92	ethylene-responsive transcription factor 4-like [Cucurbita pepo subsp. pepo]	[more]
XP_038897001.1	4.5e-71	78.71	ethylene-responsive transcription factor 4 [Benincasa hispida]	[more]

BLAST of Lcy12g011670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15210.1	1.0e-36	51.27	ethylene responsive element binding factor 4	[more]
AT1G53170.1	3.8e-28	48.35	ethylene response factor 8	[more]
AT5G44210.1	5.5e-27	85.94	erf domain protein 9	[more]
AT3G20310.1	8.8e-25	38.77	ethylene response factor 7	[more]
AT1G28370.1	5.7e-24	64.65	ERF domain protein 11	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 44..60 score: 74.65 coord: 22..33 score: 66.67
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 21..84 e-value: 3.2E-37 score: 139.6
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 21..70 e-value: 3.9E-14 score: 52.6
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 21..78 score: 24.539518
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 21..79 e-value: 1.04209E-29 score: 102.35
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 20..79 e-value: 1.7E-28 score: 100.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..111
None	No IPR available	PANTHER	PTHR31677	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	coord: 1..112
None	No IPR available	PANTHER	PTHR31677	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	coord: 128..184
None	No IPR available	PANTHER	PTHR31677:SF156	ERF FAMILY PROTEIN	coord: 128..184
None	No IPR available	PANTHER	PTHR31677:SF156	ERF FAMILY PROTEIN	coord: 1..112
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 21..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy12g011670.1	Lcy12g011670.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity