Lcy12g010650 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy12g010650
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	protein NDR1-like
Location	Chr12: 37915710 .. 37916708 (+)
RNA-Seq Expression	Lcy12g010650
Synteny	Lcy12g010650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTTTCACCGGAATCTTTTTTTCATTGCGCCGGAAAACATGACGGAATCCGGCGGGTGCTGCCGGTGCTGCTTCAGTTTCATCTTAACTTCCGGCTTCGCAGCTCTGTTCTTATGGCTCAGCCTTCGAACCCACAAACCCAAATGCTCGATCGAATTTTTCTACATTCCAGCCCTAAATCAGTCCCTAAAATCCTCCTCAAATTCCACCGTCTTCTTCGATCTGCGCCTCAAGAACCAGAACAAAGACAAGTCGGTCTTCTACGACGCTATCAACCTCAACCTCACGCTCGTGGGGGCGGCGAACGGAAGCCGGCGGCCGGTGGGGAACCTGACGGTGGACGGATTCCACCAGGGCCGCGACAAGAAGGCGTACAGAAAGGAGTCCGTCGAGGCCCGTGGAGTGGACTGGAAGGCGGTTTCCCGGAATGGGTCGGCGGTTTTCCGGCTGGATTTGGCGACGGCGGTCAGGTACAAGATCATGTTCTGGAAGACCAAGAGGGAGAATTTGAGAGTCGGGGCAGAGGTCAAGGTCAACGGGCAGGGGGCGAAGGAGAACCCACACGGGATTACGCTCGGCTCCGGCGCCGCCGTGCCCAGTGGCTCGCCGGTGAGGATTATGTGGAGTTTTTGGGTGTTGGTGTTGATTTTGTGGAAATTTTGGTGAAATTTTGGATGGAAATTTGGGGGTTTTGTTTTGAATTGAAGTGTTTTGTTGTTGTGGGTTTGTTTGTTTGACGTTATTTGCCGGAATTTTTGGGCGGCGTTTTTAGTCGGAAGTGTCTCCACCGCCCACTCACGGCCGACGGTAGAAGGTAGAGATATTATTATTATTATTTTTGGTTAAATTAGAAATTTGTTGGTTTAAATCTCATTTTAATCCCTAAACTTTTAAGTTTGTTCTATTGAAGTCCTTCAACTTTCAAAACGTTCATTTTGGTCATTGAACTTTCAAATTTGTTCTATTCTAGTCCCTGAACTTTCAAAATGTCTATTTTAG

mRNA sequence

TCTTTTCACCGGAATCTTTTTTTCATTGCGCCGGAAAACATGACGGAATCCGGCGGGTGCTGCCGGTGCTGCTTCAGTTTCATCTTAACTTCCGGCTTCGCAGCTCTGTTCTTATGGCTCAGCCTTCGAACCCACAAACCCAAATGCTCGATCGAATTTTTCTACATTCCAGCCCTAAATCAGTCCCTAAAATCCTCCTCAAATTCCACCGTCTTCTTCGATCTGCGCCTCAAGAACCAGAACAAAGACAAGTCGGTCTTCTACGACGCTATCAACCTCAACCTCACGCTCGTGGGGGCGGCGAACGGAAGCCGGCGGCCGGTGGGGAACCTGACGGTGGACGGATTCCACCAGGGCCGCGACAAGAAGGCGTACAGAAAGGAGTCCGTCGAGGCCCGTGGAGTGGACTGGAAGGCGGTTTCCCGGAATGGGTCGGCGGTTTTCCGGCTGGATTTGGCGACGGCGGTCAGGTACAAGATCATGTTCTGGAAGACCAAGAGGGAGAATTTGAGAGTCGGGGCAGAGGTCAAGGTCAACGGGCAGGGGGCGAAGGAGAACCCACACGGGATTACGCTCGGCTCCGGCGCCGCCGTGCCCAGTGGCTCGCCGGTGAGGATTATGTGGAGTTTTTGGGTGTTGGTGTTGATTTTGTGGAAATTTTGGTGAAATTTTGGATGGAAATTTGGGGGTTTTGTTTTGAATTGAAGTGTTTTGTTGTTGTGGGTTTGTTTGTTTGACGTTATTTGCCGGAATTTTTGGGCGGCGTTTTTAGTCGGAAGTGTCTCCACCGCCCACTCACGGCCGACGGTAGAAGGTAGAGATATTATTATTATTATTTTTGGTTAAATTAGAAATTTGTTGGTTTAAATCTCATTTTAATCCCTAAACTTTTAAGTTTGTTCTATTGAAGTCCTTCAACTTTCAAAACGTTCATTTTGGTCATTGAACTTTCAAATTTGTTCTATTCTAGTCCCTGAACTTTCAAAATGTCTATTTTAG

Coding sequence (CDS)

ATGACGGAATCCGGCGGGTGCTGCCGGTGCTGCTTCAGTTTCATCTTAACTTCCGGCTTCGCAGCTCTGTTCTTATGGCTCAGCCTTCGAACCCACAAACCCAAATGCTCGATCGAATTTTTCTACATTCCAGCCCTAAATCAGTCCCTAAAATCCTCCTCAAATTCCACCGTCTTCTTCGATCTGCGCCTCAAGAACCAGAACAAAGACAAGTCGGTCTTCTACGACGCTATCAACCTCAACCTCACGCTCGTGGGGGCGGCGAACGGAAGCCGGCGGCCGGTGGGGAACCTGACGGTGGACGGATTCCACCAGGGCCGCGACAAGAAGGCGTACAGAAAGGAGTCCGTCGAGGCCCGTGGAGTGGACTGGAAGGCGGTTTCCCGGAATGGGTCGGCGGTTTTCCGGCTGGATTTGGCGACGGCGGTCAGGTACAAGATCATGTTCTGGAAGACCAAGAGGGAGAATTTGAGAGTCGGGGCAGAGGTCAAGGTCAACGGGCAGGGGGCGAAGGAGAACCCACACGGGATTACGCTCGGCTCCGGCGCCGCCGTGCCCAGTGGCTCGCCGGTGAGGATTATGTGGAGTTTTTGGGTGTTGGTGTTGATTTTGTGGAAATTTTGGTGA

Protein sequence

MTESGGCCRCCFSFILTSGFAALFLWLSLRTHKPKCSIEFFYIPALNQSLKSSSNSTVFFDLRLKNQNKDKSVFYDAINLNLTLVGAANGSRRPVGNLTVDGFHQGRDKKAYRKESVEARGVDWKAVSRNGSAVFRLDLATAVRYKIMFWKTKRENLRVGAEVKVNGQGAKENPHGITLGSGAAVPSGSPVRIMWSFWVLVLILWKFW

Homology

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BLAST of Lcy12g010650 vs. ExPASy Swiss-Prot
Match: O48915 (Protein NDR1 OS=Arabidopsis thaliana OX=3702 GN=NDR1 PE=1 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 2.6e-40
Identity = 96/211 (45.50%), Postives = 127/211 (60.19%), Query Frame = 0


Query: 2   TESG-GCCRCCFSFILTSGFAALFLWLSLRTHKPKCSIEFFYIPALNQSLKSSSNSTVFF 61
           TE G  CC CC SFI T+G  +LFLWLSLR  KPKCSI+ F+IPAL +   S  N+T+ F
Sbjct: 8   TEGGRNCCTCCLSFIFTAGLTSLFLWLSLRADKPKCSIQNFFIPALGKDPNSRDNTTLNF 67

Query: 62  DLRLKNQNKDKSVFYDAINLNLTLVGAA---NGSRRPVGNLTVDGFHQGRDKKAYRKESV 121
            +R  N NKDK ++YD ++LN + +      + +   VGN TV  F+QG  KKA +   V
Sbjct: 68  MVRCDNPNKDKGIYYDDVHLNFSTINTTKINSSALVLVGNYTVPKFYQGHKKKAKKWGQV 127

Query: 122 EA--RGVDWKAVSRNGSAVFRLDLATAVRYKIMFWKTKRENLRVGAEVKVNGQGAKENPH 181
           +        +AV  NGSAVFRLDL T VR+KI+FWKTKR  + VGA+V+VNG G K    
Sbjct: 128 KPLNNQTVLRAVLPNGSAVFRLDLKTQVRFKIVFWKTKRYGVEVGADVEVNGDGVKAQKK 187

Query: 182 GITL---GSGAAVPSGSPVRIMWSFWVLVLI 204
           GI +    S   + S  P+ ++ +  V   I
Sbjct: 188 GIKMKKSDSSFPLRSSFPISVLMNLLVFFAI 218

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BLAST of Lcy12g010650 vs. ExPASy TrEMBL
Match: A0A6J1CEH8 (protein NDR1-like OS=Momordica charantia OX=3673 GN=LOC111010486 PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 2.2e-90
Identity = 176/208 (84.62%), Postives = 183/208 (87.98%), Query Frame = 0


Query: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTHKPKCSIEFFYIPALNQSLKSSSNSTVFF 60
           MTE+GGC RCCFSFILTSGF ALFLWLSLRTHKPKCSIE FYIPALNQSL SSS+STVFF
Sbjct: 1   MTEAGGCGRCCFSFILTSGFTALFLWLSLRTHKPKCSIESFYIPALNQSLNSSSDSTVFF 60

Query: 61  DLRLKNQNKDKSVFYDAINLNLTLVGAANGSRRPVGNLTVDGFHQGRDKKAYRKESVEAR 120
           DLRLKNQNKDKSVFYDAINLNLTLV   +G RRPVGNLTV GFHQGRDKKA+RK  VEAR
Sbjct: 61  DLRLKNQNKDKSVFYDAINLNLTLV---DGGRRPVGNLTVAGFHQGRDKKAFRKGQVEAR 120

Query: 121 GVDWKAVSRNGSAVFRLDLATAVRYKIMFWKTKRENLRVGAEVKVNGQGAKENPHGITLG 180
           GVDWKAV RNGSAVFRLDLATAVRYKI+FWKTKR+NLRVGAEVKVN QGAKE PHGITL 
Sbjct: 121 GVDWKAVRRNGSAVFRLDLATAVRYKILFWKTKRDNLRVGAEVKVNAQGAKEYPHGITLS 180

Query: 181 SGAAVPSGSPVRIMWSFWVLVLILWKFW 209
           SGAAV   SP   +WS  V  LILWKFW
Sbjct: 181 SGAAVAGRSPAGALWS--VGALILWKFW 203

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BLAST of Lcy12g010650 vs. ExPASy TrEMBL
Match: A0A6J1F5U5 (protein NDR1-like OS=Cucurbita moschata OX=3662 GN=LOC111442624 PE=4 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 2.7e-88
Identity = 170/209 (81.34%), Postives = 183/209 (87.56%), Query Frame = 0


Query: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTHKPKCSIEFFYIPALNQSLKSSSNSTVFF 60
           MTE GGCCRCCFSFILTSGFAALFLWLSLRT KPKCSIE FYIPALNQSL S  NSTV F
Sbjct: 1   MTEPGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60

Query: 61  DLRLKNQNKDKSVFYDAINLNLTLVG-AANGSRRPVGNLTVDGFHQGRDKKAYRKESVEA 120
           DLRLKNQNKDKSVFYD++NLNLTLVG AA GSRRP+GN+TV GFHQGR KKA+R E++E 
Sbjct: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGAAAGGSRRPLGNVTVPGFHQGRGKKAFRNETIET 120

Query: 121 RGVDWKAVSRNGSAVFRLDLATAVRYKIMFWKTKRENLRVGAEVKVNGQGAKENPHGITL 180
           RGVDWKAVSRNG+AVFRLDLATAVR+KI+FW TKRENLRVGAE KVN QGA E P GITL
Sbjct: 121 RGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGATEYP-GITL 180

Query: 181 GSGAAVPSGSPVRIMWSFWVLVLILWKFW 209
            SG AVP GSPVR++WSFWV V  LWK +
Sbjct: 181 SSGVAVPDGSPVRVIWSFWVFV--LWKLF 206

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BLAST of Lcy12g010650 vs. ExPASy TrEMBL
Match: A0A5A7TYN2 (Protein NDR1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00260 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 4.3e-86
Identity = 164/208 (78.85%), Postives = 180/208 (86.54%), Query Frame = 0


Query: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTHKPKCSIEFFYIPALNQSLKSSSNS-TVF 60
           MTESG CC+CCF FI+T+GFAALFLWLSLRT KPKCSIE FYIPALNQSL SSSNS T++
Sbjct: 1   MTESGWCCKCCFKFIITAGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSSSNSTTLY 60

Query: 61  FDLRLKNQNKDKSVFYDAINLNLTLVGAANGSRRPVGNLTVDGFHQGRDKKAYRKESVEA 120
           FDLRLKNQNKDKSV+YD I LN TL+  A   RRPVGNLTV GFHQGRDKKA RKESVEA
Sbjct: 61  FDLRLKNQNKDKSVYYDTIYLNFTLLDEA---RRPVGNLTVPGFHQGRDKKALRKESVEA 120

Query: 121 RGVDWKAVSRNGSAVFRLDLATAVRYKIMFWKTKRENLRVGAEVKVNGQGAKENPHGITL 180
           RGVDWKAVSRNGS + RLDLATAVRYKI+ WKTKRENLR+G E+KVNGQG K+NPHGITL
Sbjct: 121 RGVDWKAVSRNGSTIVRLDLATAVRYKILLWKTKRENLRLGTEIKVNGQGLKDNPHGITL 180

Query: 181 GSGAAVPSGSPVRIMWSFWVLVLILWKF 208
            SGAA+P G+ VR++WSFWV V   WKF
Sbjct: 181 NSGAAMPGGTLVRVIWSFWVFV--WWKF 203

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BLAST of Lcy12g010650 vs. ExPASy TrEMBL
Match: A0A1S3BZM3 (protein NDR1-like OS=Cucumis melo OX=3656 GN=LOC103494933 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 4.3e-86
Identity = 164/208 (78.85%), Postives = 180/208 (86.54%), Query Frame = 0


Query: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTHKPKCSIEFFYIPALNQSLKSSSNS-TVF 60
           MTESG CC+CCF FI+T+GFAALFLWLSLRT KPKCSIE FYIPALNQSL SSSNS T++
Sbjct: 1   MTESGWCCKCCFKFIITAGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSSSNSTTLY 60

Query: 61  FDLRLKNQNKDKSVFYDAINLNLTLVGAANGSRRPVGNLTVDGFHQGRDKKAYRKESVEA 120
           FDLRLKNQNKDKSV+YD I LN TL+  A   RRPVGNLTV GFHQGRDKKA RKESVEA
Sbjct: 61  FDLRLKNQNKDKSVYYDTIYLNFTLLDEA---RRPVGNLTVPGFHQGRDKKALRKESVEA 120

Query: 121 RGVDWKAVSRNGSAVFRLDLATAVRYKIMFWKTKRENLRVGAEVKVNGQGAKENPHGITL 180
           RGVDWKAVSRNGS + RLDLATAVRYKI+ WKTKRENLR+G E+KVNGQG K+NPHGITL
Sbjct: 121 RGVDWKAVSRNGSTIVRLDLATAVRYKILLWKTKRENLRLGTEIKVNGQGLKDNPHGITL 180

Query: 181 GSGAAVPSGSPVRIMWSFWVLVLILWKF 208
            SGAA+P G+ VR++WSFWV V   WKF
Sbjct: 181 NSGAAMPGGTLVRVIWSFWVFV--WWKF 203

[Close]

BLAST of Lcy12g010650 vs. ExPASy TrEMBL
Match: A0A6J1IH99 (protein NDR1-like OS=Cucurbita maxima OX=3661 GN=LOC111476935 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 2.8e-85
Identity = 166/208 (79.81%), Postives = 179/208 (86.06%), Query Frame = 0


Query: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTHKPKCSIEFFYIPALNQSLKSSSNSTVFF 60
           MTESGGCCRCCFSFILTSGFAALFLWLSLRT KPKCSIE FYIPALNQSL S  NSTV F
Sbjct: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSPLNSTVSF 60

Query: 61  DLRLKNQNKDKSVFYDAINLNLTLVGAANGSRRPVGNLTVDGFHQGRDKKAYRKESVEAR 120
           DLRLKNQNKDKSVFYD++NLNLTLVG      RP+GN+TV GFHQGR KKA+R E++EAR
Sbjct: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGG-----RPLGNVTVPGFHQGRGKKAFRNETIEAR 120

Query: 121 GVDWKAVSRNGSAVFRLDLATAVRYKIMFWKTKRENLRVGAEVKVNGQGAKENPHGITLG 180
           GVDWKAVSRNGSA+FRLDLATAVR+KI+FW TKRENLRVGAE KVN QGA E P GITL 
Sbjct: 121 GVDWKAVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNKQGATEYP-GITLS 180

Query: 181 SGAAVPSGSPVRIMWSFWVLVLILWKFW 209
           SGAAVP GSPV ++WS WV V  LWK +
Sbjct: 181 SGAAVPDGSPVTVIWSSWVFV--LWKLF 200

[Close]

BLAST of Lcy12g010650 vs. NCBI nr
Match: XP_038897087.1 (protein NDR1-like [Benincasa hispida])

HSP 1 Score: 344.7 bits (883), Expect = 5.4e-91
Identity = 169/207 (81.64%), Postives = 185/207 (89.37%), Query Frame = 0


Query: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTHKPKCSIEFFYIPALNQSLKSSSNSTVFF 60
           MTESG CC CCF FI+T+GFAALFLWLSLRTHKPKCSIEFFYIPALNQSL S SNST+ F
Sbjct: 1   MTESGWCCHCCFKFIITTGFAALFLWLSLRTHKPKCSIEFFYIPALNQSLNSPSNSTLLF 60

Query: 61  DLRLKNQNKDKSVFYDAINLNLTLVGAANGSRRPVGNLTVDGFHQGRDKKAYRKESVEAR 120
           DLRLKNQNKDKSV+YD+I+LNLTLVGA +G+RRPVGNLTV GFHQGRDKKA+RKE+VEAR
Sbjct: 61  DLRLKNQNKDKSVYYDSISLNLTLVGAPDGTRRPVGNLTVPGFHQGRDKKAFRKETVEAR 120

Query: 121 GVDWKAVSRNGSAVFRLDLATAVRYKIMFWKTKRENLRVGAEVKVNGQGAKENPHGITLG 180
           GVDWKAVSRNG  V RLD ATAVRYKI+FWKTKRENLR+GAEVKVN QG K+ P  ITL 
Sbjct: 121 GVDWKAVSRNGPVVVRLDFATAVRYKILFWKTKRENLRLGAEVKVNRQGEKDYPRSITLN 180

Query: 181 SGAAVPSGSPVRIMWSFWVLVLILWKF 208
           SGAAVPSGS +R++WSFWV V  LWKF
Sbjct: 181 SGAAVPSGSLMRVIWSFWVFV--LWKF 205

[Close]

BLAST of Lcy12g010650 vs. NCBI nr
Match: XP_022139632.1 (protein NDR1-like [Momordica charantia])

HSP 1 Score: 341.7 bits (875), Expect = 4.6e-90
Identity = 176/208 (84.62%), Postives = 183/208 (87.98%), Query Frame = 0


Query: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTHKPKCSIEFFYIPALNQSLKSSSNSTVFF 60
           MTE+GGC RCCFSFILTSGF ALFLWLSLRTHKPKCSIE FYIPALNQSL SSS+STVFF
Sbjct: 1   MTEAGGCGRCCFSFILTSGFTALFLWLSLRTHKPKCSIESFYIPALNQSLNSSSDSTVFF 60

Query: 61  DLRLKNQNKDKSVFYDAINLNLTLVGAANGSRRPVGNLTVDGFHQGRDKKAYRKESVEAR 120
           DLRLKNQNKDKSVFYDAINLNLTLV   +G RRPVGNLTV GFHQGRDKKA+RK  VEAR
Sbjct: 61  DLRLKNQNKDKSVFYDAINLNLTLV---DGGRRPVGNLTVAGFHQGRDKKAFRKGQVEAR 120

Query: 121 GVDWKAVSRNGSAVFRLDLATAVRYKIMFWKTKRENLRVGAEVKVNGQGAKENPHGITLG 180
           GVDWKAV RNGSAVFRLDLATAVRYKI+FWKTKR+NLRVGAEVKVN QGAKE PHGITL 
Sbjct: 121 GVDWKAVRRNGSAVFRLDLATAVRYKILFWKTKRDNLRVGAEVKVNAQGAKEYPHGITLS 180

Query: 181 SGAAVPSGSPVRIMWSFWVLVLILWKFW 209
           SGAAV   SP   +WS  V  LILWKFW
Sbjct: 181 SGAAVAGRSPAGALWS--VGALILWKFW 203

[Close]

BLAST of Lcy12g010650 vs. NCBI nr
Match: KAG7024897.1 (Protein NDR1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 336.3 bits (861), Expect = 1.9e-88
Identity = 171/209 (81.82%), Postives = 184/209 (88.04%), Query Frame = 0


Query: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTHKPKCSIEFFYIPALNQSLKSSSNSTVFF 60
           MTE GGCCRCCFSFILTSGFAALFLWLSLRT KPKCSIE FYIPALNQSL S  NSTV F
Sbjct: 1   MTEPGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60

Query: 61  DLRLKNQNKDKSVFYDAINLNLTLVG-AANGSRRPVGNLTVDGFHQGRDKKAYRKESVEA 120
           DLRLKNQNKDKSVFYD++NLNLTLVG AA GSRRP+GN+TV GFHQGR KKA+R E++E 
Sbjct: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGAAAGGSRRPLGNVTVPGFHQGRGKKAFRNETIET 120

Query: 121 RGVDWKAVSRNGSAVFRLDLATAVRYKIMFWKTKRENLRVGAEVKVNGQGAKENPHGITL 180
           RGVDWKAVSRNG+AVFRLDLATAVR+KI+FW TKRENLRVGAE KVN QGA E P GITL
Sbjct: 121 RGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGATEYP-GITL 180

Query: 181 GSGAAVPSGSPVRIMWSFWVLVLILWKFW 209
            SGAAVP GSPVR++WSFWV V  LWK +
Sbjct: 181 SSGAAVPDGSPVRVIWSFWVFV--LWKLF 206

[Close]

BLAST of Lcy12g010650 vs. NCBI nr
Match: KAG6592022.1 (Protein NDR1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 335.1 bits (858), Expect = 4.3e-88
Identity = 171/209 (81.82%), Postives = 183/209 (87.56%), Query Frame = 0


Query: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTHKPKCSIEFFYIPALNQSLKSSSNSTVFF 60
           MTE GGCCRCCFSFILTSGFAALFLWLSLRT KPKCSIE FYIPALNQSL S  NSTV F
Sbjct: 1   MTEPGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60

Query: 61  DLRLKNQNKDKSVFYDAINLNLTLVG-AANGSRRPVGNLTVDGFHQGRDKKAYRKESVEA 120
           DLRLKNQNKDKSVFYD++NLNLTLVG AA GSRRP+GN+TV GFHQGR KKA+R E +E 
Sbjct: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGAAAGGSRRPLGNVTVPGFHQGRGKKAFRNEIIET 120

Query: 121 RGVDWKAVSRNGSAVFRLDLATAVRYKIMFWKTKRENLRVGAEVKVNGQGAKENPHGITL 180
           RGVDWKAVSRNG+AVFRLDLATAVR+KI+FW TKRENLRVGAE KVN QGA E P GITL
Sbjct: 121 RGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGATEYP-GITL 180

Query: 181 GSGAAVPSGSPVRIMWSFWVLVLILWKFW 209
            SGAAVP GSPVR++WSFWV V  LWK +
Sbjct: 181 SSGAAVPDGSPVRVIWSFWVFV--LWKLF 206

[Close]

BLAST of Lcy12g010650 vs. NCBI nr
Match: XP_022935836.1 (protein NDR1-like [Cucurbita moschata])

HSP 1 Score: 334.7 bits (857), Expect = 5.6e-88
Identity = 170/209 (81.34%), Postives = 183/209 (87.56%), Query Frame = 0


Query: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTHKPKCSIEFFYIPALNQSLKSSSNSTVFF 60
           MTE GGCCRCCFSFILTSGFAALFLWLSLRT KPKCSIE FYIPALNQSL S  NSTV F
Sbjct: 1   MTEPGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60

Query: 61  DLRLKNQNKDKSVFYDAINLNLTLVG-AANGSRRPVGNLTVDGFHQGRDKKAYRKESVEA 120
           DLRLKNQNKDKSVFYD++NLNLTLVG AA GSRRP+GN+TV GFHQGR KKA+R E++E 
Sbjct: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGAAAGGSRRPLGNVTVPGFHQGRGKKAFRNETIET 120

Query: 121 RGVDWKAVSRNGSAVFRLDLATAVRYKIMFWKTKRENLRVGAEVKVNGQGAKENPHGITL 180
           RGVDWKAVSRNG+AVFRLDLATAVR+KI+FW TKRENLRVGAE KVN QGA E P GITL
Sbjct: 121 RGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGATEYP-GITL 180

Query: 181 GSGAAVPSGSPVRIMWSFWVLVLILWKFW 209
            SG AVP GSPVR++WSFWV V  LWK +
Sbjct: 181 SSGVAVPDGSPVRVIWSFWVFV--LWKLF 206

[Close]

BLAST of Lcy12g010650 vs. TAIR 10
Match: AT3G20600.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 166.8 bits (421), Expect = 1.9e-41
Identity = 96/211 (45.50%), Postives = 127/211 (60.19%), Query Frame = 0


Query: 2   TESG-GCCRCCFSFILTSGFAALFLWLSLRTHKPKCSIEFFYIPALNQSLKSSSNSTVFF 61
           TE G  CC CC SFI T+G  +LFLWLSLR  KPKCSI+ F+IPAL +   S  N+T+ F
Sbjct: 8   TEGGRNCCTCCLSFIFTAGLTSLFLWLSLRADKPKCSIQNFFIPALGKDPNSRDNTTLNF 67

Query: 62  DLRLKNQNKDKSVFYDAINLNLTLVGAA---NGSRRPVGNLTVDGFHQGRDKKAYRKESV 121
            +R  N NKDK ++YD ++LN + +      + +   VGN TV  F+QG  KKA +   V
Sbjct: 68  MVRCDNPNKDKGIYYDDVHLNFSTINTTKINSSALVLVGNYTVPKFYQGHKKKAKKWGQV 127

Query: 122 EA--RGVDWKAVSRNGSAVFRLDLATAVRYKIMFWKTKRENLRVGAEVKVNGQGAKENPH 181
           +        +AV  NGSAVFRLDL T VR+KI+FWKTKR  + VGA+V+VNG G K    
Sbjct: 128 KPLNNQTVLRAVLPNGSAVFRLDLKTQVRFKIVFWKTKRYGVEVGADVEVNGDGVKAQKK 187

Query: 182 GITL---GSGAAVPSGSPVRIMWSFWVLVLI 204
           GI +    S   + S  P+ ++ +  V   I
Sbjct: 188 GIKMKKSDSSFPLRSSFPISVLMNLLVFFAI 218

[Close]

BLAST of Lcy12g010650 vs. TAIR 10
Match: AT3G20590.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 149.8 bits (377), Expect = 2.4e-36
Identity = 85/179 (47.49%), Postives = 110/179 (61.45%), Query Frame = 0


Query: 7   CCRCCFSFILTSGFAALFLWLSLRTHKPKCSIEFFYIPALNQSLKSSSNSTVFFDLRLKN 66
           CC C F FI T+   AL LWLSLR  KPKCSI+ FYIPAL+++L S  N+T+ F +R  N
Sbjct: 14  CCTCFFKFIFTTRLGALILWLSLRAKKPKCSIQNFYIPALSKNLSSRDNTTLNFMVRCDN 73

Query: 67  QNKDKSVFYDAINLNLTLVGAANGSRRP---VGNLTVDGFHQGRDKKAYRKESVEA--RG 126
            NKDK ++YD ++L  + +     +      V N TV  F+QG  KKA +   V      
Sbjct: 74  PNKDKGIYYDDVHLTFSTINTTTTNSSDLVLVANYTVPKFYQGHKKKAKKWGQVWPLNNQ 133

Query: 127 VDWKAVSRNGSAVFRLDLATAVRYKIMFWKTK-RENLRVGAEVKVNGQGAKENPHGITL 180
              +AV  NGSAVFRLDL T VR+KI+FWKTK    ++VGA+V+VNG G K N   I +
Sbjct: 134 TVLRAVLPNGSAVFRLDLKTHVRFKIVFWKTKWYRRIKVGADVEVNGDGVKANEKEIKM 192

[Close]

BLAST of Lcy12g010650 vs. TAIR 10
Match: AT3G20610.1 (non-race specific disease resistance protein, putative )

HSP 1 Score: 118.6 bits (296), Expect = 5.9e-27
Identity = 79/189 (41.80%), Postives = 111/189 (58.73%), Query Frame = 0


Query: 13  SFILTSGFAALFLWLS-LRTHKPKCSIEFFYIPALNQSLKSSSNSTVFFDLRLKNQNKDK 72
           + +  S   AL LWLS L  H P+CSI +FYIPALN+SL SS N+T+ F +RLKN N  +
Sbjct: 19  TLLYVSFLLALCLWLSTLVHHIPRCSIHYFYIPALNKSLISSDNTTLNFMVRLKNINAKQ 78

Query: 73  SVFYDAINLNLTLVGAANGSRRPVGNLTVDGFHQGRDKKAYRKESVEARGVD----WKAV 132
            ++Y+  +L+L+     N S   V N TV  F+QG +KKA  K+  +A   +     +AV
Sbjct: 79  GIYYE--DLHLSFSTRINNSSLLVANYTVPRFYQGHEKKA--KKWGQALPFNNQTVIQAV 138

Query: 133 SRNGSAVFRLDLATAVRYKIMFWKTKRENLRVGAEVKVNGQGA---KENPHGITLGSGAA 192
             NGSA+FR+DL   V+YK+M WKTKR  L+    ++VN  GA   K+   GI +     
Sbjct: 139 LPNGSAIFRVDLKMQVKYKVMSWKTKRYKLKASVNLEVNEDGATKVKDKEDGIKM----K 198

Query: 193 VPSGSPVRI 194
           +   SP R+
Sbjct: 199 ISDSSPQRL 199

[Close]

BLAST of Lcy12g010650 vs. TAIR 10
Match: AT4G05220.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 53.9 bits (128), Expect = 1.8e-07
Identity = 43/173 (24.86%), Postives = 75/173 (43.35%), Query Frame = 0


Query: 11  CFSFILT---SGFAALFLWLSLRTHKPKCSIEFFYIPALNQSLKSSSNSTVFFDLRLKNQ 70
           C  F+L     G  A  LWLSLR H+P+  I+ F +  L+Q      N+ + F++ + N 
Sbjct: 47  CAMFLLVLFFVGVIAFILWLSLRPHRPRFHIQDFVVQGLDQP-TGVENARIAFNVTILNP 106

Query: 71  NKDKSVFYDAI-------NLNLTLVGAANG-SRRPVGNLTVDGFHQGRDKKAYRKESVEA 130
           N+   V++D++       +  + L+   N   ++P     V G   G         S+  
Sbjct: 107 NQHMGVYFDSMEGSIYYKDQRVGLIPLLNPFFQQPTNTTIVTGTLTG--------ASLTV 166

Query: 131 RGVDWKAVSRN---GSAVFRLDLATAVRYKIMFWKTKRENLRVGAEVKVNGQG 170
               W   S +   G+  FRLD+ + +R+K+  W +K   +     + V   G
Sbjct: 167 NSNRWTEFSNDRAQGTVGFRLDIVSTIRFKLHRWISKHHRMHANCNIVVGRDG 210

The following BLAST results are available for this feature:

BLAST of Lcy12g010650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O48915	2.6e-40	45.50	Protein NDR1 OS=Arabidopsis thaliana OX=3702 GN=NDR1 PE=1 SV=1	[more]

BLAST of Lcy12g010650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CEH8	2.2e-90	84.62	protein NDR1-like OS=Momordica charantia OX=3673 GN=LOC111010486 PE=4 SV=1	[more]
A0A6J1F5U5	2.7e-88	81.34	protein NDR1-like OS=Cucurbita moschata OX=3662 GN=LOC111442624 PE=4 SV=1	[more]
A0A5A7TYN2	4.3e-86	78.85	Protein NDR1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G0...	[more]
A0A1S3BZM3	4.3e-86	78.85	protein NDR1-like OS=Cucumis melo OX=3656 GN=LOC103494933 PE=4 SV=1	[more]
A0A6J1IH99	2.8e-85	79.81	protein NDR1-like OS=Cucurbita maxima OX=3661 GN=LOC111476935 PE=4 SV=1	[more]

BLAST of Lcy12g010650 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038897087.1	5.4e-91	81.64	protein NDR1-like [Benincasa hispida]	[more]
XP_022139632.1	4.6e-90	84.62	protein NDR1-like [Momordica charantia]	[more]
KAG7024897.1	1.9e-88	81.82	Protein NDR1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6592022.1	4.3e-88	81.82	Protein NDR1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022935836.1	5.6e-88	81.34	protein NDR1-like [Cucurbita moschata]	[more]

BLAST of Lcy12g010650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20600.1	1.9e-41	45.50	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G20590.1	2.4e-36	47.49	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G20610.1	5.9e-27	41.80	non-race specific disease resistance protein, putative	[more]
AT4G05220.1	1.8e-07	24.86	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044839	Protein NDR1-like	PANTHER	PTHR31415	OS05G0367900 PROTEIN	coord: 1..185
None	No IPR available	PANTHER	PTHR31415:SF52	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY-RELATED	coord: 1..185

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy12g010650.1	Lcy12g010650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098542	defense response to other organism
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane