Lcy12g010230 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy12g010230
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Reverse transcriptase domain-containing protein
Location	Chr12: 37476482 .. 37484574 (+)
RNA-Seq Expression	Lcy12g010230
Synteny	Lcy12g010230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGCTAGGGTTCCGGTGAGCGAGCGTGCGGTGGAGGCGGCGATCGGTGAGCAAGGTTTGTGAGTCGGCGAGCGGTGAACAAGATCGTGAATCGGTGTGGGTTTGCTGGTGTGAGGCACGGCTGTGAGAAGGAGGCGGTAGTCAGTGTCTCGATACAGGTGTAGGCGCGACGGTAAAGGTTTCAGTGGTTCCTCTATTCCGGCGAGCGTGCGGCGGAGGCGGGCGTTCCAGCGAGGGAGAGGCTGAGATCCACCGTCTGAGGTGTGGTGGCGGCTGGAGACTAGAGTGCAGAGGGTTTGCTATCCGGATTCAGGTGTGCGGCGCGGTGGGCGTGCGGCTGAGCAGAGGATTGATTCCGGCGTGAGCGTTGTGGTGAAGACGGTCGGATTGCAGGGATTTCCGTCGGTCTTGAGGCGGGTGGCTTTCTTCGGCGATTGGAGGTGGTGGTGCGGACGGTGGTCGGCTGAGGCGGCGGTTTCCAAGTGTGATTTTTTCGTTTTGCAGGTTTGTGGTTTCTGCGGGGCGACTTTTTGGTGGGTTTCTAGTGTGGGTCTTGGGTTTTGATTGTGGGATTGAGTTTCTGGTTTTCTGTGGTGTTGTTTTGAAGGTGTTCATATAACACATGCGGAAGCAATTGAAGATCGGAAGCACTTAAGACATTCAATTTTGCTCCTAAAGCATGCATGTTCTATAAAAGACAGAATATAGAGTTGAGAGAACACCAACCTTTGTAGCTCACTTATGTGGAACTCCTTGTGGTGTTTGCCTCTCCTATGCTCCTTGGACAACCTCTAGAGTCTTCCCTACTATTCTCTTGGGCCTAGAAAGACTTGTGGGAGTCTATAGAAGAAAGATAGAAGGGAATGCTTGATGGTACAAGCTTTTGGAAGGAGATGAAATGAGAGAGAATTTGAGGGAGAAAATTTGCAGCATAACACTAAATGAAAGCTTGCTCTTCTTGAATCTAATTCAAGCCCCTTTTATAGACATCTCCCATGCAAAGACAAGCTTCATGACACTTAGCCACATGGCCAAGATGCAACTCAAAGTGGATTCTAGGTGTCTACTTCACAACACATGCATCTAGTGCATGGTTGTGTTGTTTTCCACTATGCATCATCATGCAAGAGTGGAAATGCCACTAAATCCATTATGAATTGTATCCTAATTGTAAATTTTCAGCTTGCAATTCATTTCAATTTCAATTCAAAATTGAAATTGATTTCTAGGCAATTAATTGGGACATTTCCAAGTAATTTTGATATGATTGATCCAATCAATCTTTATCACCTAATGTCATGAATTATATATGATTCCTAATACATATATGGTATTTAAAACACTTTCAAATACCTCATCTCTCAATTCCTAATTTAATTCCTAATTAAATCATTGTGTCGAACACGTCTTACGATAAAAATCCTATTTCCCGTTTTTGAACGATTCAAAAATTCCTATCAATATGTTCTAGGCTTTAATCCGATATGAGCTAGTAGAGGGACCTAATGGACCTATAGATCATGGGCTCCAACGATTCAAGGCTAACTGACTAATCTCATTATCTAAGCTAGCCAACATTCGTTAACTATCGGGACACTCCACTATAGCCCGATAGTTGCACTCCCCTCACTATAGATATATTTCCGTCCACTTGATTTAACCATGTTCAGTAAGTCGTTCCTTCACAGGTTGTTCGTAGCTATAGCTAGGTCAAATAACCGTTACACCCCTATAGTACTTCTTGTTCCTTAAGTTCCACTAATCCTCTAATGAACAATCGGTTTGCGGTCCAACCATCAAACCTAAGTTCCTCTCGATCCAACGAGAGGGTGGGGCCCTTTGTTCAAGTCCTGGAGTTAGTACTTAAGAGAACAACCTCTCTGCTATCCCTAAAATGGGTAGGAGTGAATTCCGTCTTGCGAAACTATGTCCCCAGCTATCTATTCGATCTTATCCCCAAAATGGTAGGCTTGTCGAGTCGGCGATGCTGGCCACTCTCACCCATGCAGATCAAAGGATAATCTCTCATAAACAGGAGTTCATAGATAGCTCAGGATTAAGAACGAGTTACCTAGGTCATCTATGAGAAATAGTCAGTTTCTTCAGTAAACGGCGTTATAAAGAGAAAGTGACTTATTTCGTGGTCCAGTCTTATGCAAACTCATTGCATAGGACGCCCCCACTCGCATGTCACCACATGAACGATTTAGGATCTCATCGTTTGTACTTAATACAAAGTGGGCCGCGTCCATAGTGTCACCAGGATAAGGCACCCAACCGTATCCTTATACTATTGACTATTTTGACTATAAACTTCAACTTGATCCTACGATATGTCCCTACATATAGTTCGAGTATTCATTTTATAGTCAAGGATCTTAGTTTATTGGATTTAGGTTAATCATTCGCAATTTACATATTCAATAACATCTTTTACTGAATAACCTCAATAACGTCTTTATTGGAAATAGAATATGTTTAATGATTTACAAACTACGAGTTTATAGGACATTAAACCCAACAATTTTGCTGAGATTTTGGGTTTGATTGCCGTGGAGGTTGTCGGATGTGTGTGTGAAGGCTGTTGTTGTGGGCTGTGAGACAGTGTGTGTTGGATTGAGTGAACTTGGGTGAAGGGAGACTTTTGATGATGGATGACTTGGTGAAGAAGTGGAAGTCGTGGTCACTTACCGGGGAGGAGGCGGAGGTGATACGTCCGGGTGCAGTTCCGTCTTCTCTGTCAGCGGCAGACTTGGATTTATGTGTGGTAGGTAAGGTCCTATCATCCAAGCGGGTCAATCCAGAGGCCTTTCGCAATGTGATTCGGTCAGCGTGGAGGGTTCACAATGCGACGCGTGTGGAGCCAGCTGGAGAGAATGTCTTTGTGATTCAGTTTCGTACCAGGGGGAGAAGTCGAGAGTTCTAGGTACTGGTCCTTGGGCCATTGACCGGTCCCTTATCGTGCTTAAGGAGCCAAAGGATGTTGCGTCGGTGCTAGAAACAGAGTTTAAAGATTGTCCTTTTTGGGTGCAGATTCATGATGTTCCTATGAAGTGGCAGACGAGAGGTTGGGCGCAGCATCTGGGAGGCAAGATTGGGGTGGTTGAGGAGGTGGGCGGCTCAAATGAGAATGATTGGATAGGCCCTATTCTGCGGTTCAGAGTTCGTCTTCGGTTGGACCGACCACTTCGAAGGGGGTTTCATATGCAGGATGATGATGGGAAGGACTCTTGGTGTCCAGTATTGTATGAGCGTCTTCCGGACTTCTGCTTTGGGTGTGGATGTTTAGGCCACTCGAGGCGGGAATGTGAAGGTGTGGGGGCGAGTTCTTCAGGTGTGGGGGAGGATCGGTATGGCGAGTGGCTGAGAGCAGGTGCCTTTCTTGGGGAGAGTTTCCGGCAGGATCCAGGTCAGGTAGGTGTAAAGGACAGTGGGAAGCAGCCCGTAGTGGAACCCACGCCTGTTTCAGGGGAGGTAGTAGGTCCTGTTCAGGGTGATGTGCATGAGAGGGAGACAGGGGTACCCGACAGCGTTGCTGGGGAGGAAGTGCCAGTTCCTGCTTTGGGTACATGGGCGGAGATTTGCACGGTGGAGGGAGGGAAGGAAGCTCAGGTGGAGGGCAGTGGGAAGGGTAAATAGAAGGTGGGGCATGGCCCCTCTGAACCATGGTCCACCTATGTGGAGGGGGAGGCTATGGTGGTGGATAAGGTGGAGATGGTCCAGGGTAGAGAGGTTGAGAAGGGGGGCAAGAGTACCAGTAGCAAGGGGTGGAAGAGGCGAGCAAGAGAAATTTCAGCAGATGTTACAAACTCTGAGGTTCCTGTGACGCTGGATGGGAGCAAGCGGAAGGTTGATTCGGGGTCGTTGGACGGACAGGGGGGAAAGAAGATGAGAGTGGAGGAGGAAAGTAGGTTTCTACCAGATATGACTGGTTCGATTTCGGCGGCGGCTGTCTCACAGCCCCGCCAGTCGCAATGAATATCCTATTTTGGAATGTACGGGGTTTGGGGTCACCGCGTGCATTCCGGCGGTTGTACAAGCTGGTACAACAACATAGACCTCACATGGTGTTTCTGTCAGAGACAATGGTCCACTCGTCACGTTTTGATTCTCTTAAGGTAAGTTTGGGGTATGCTAACTGTTTTTCTGTGAGCAGTGTTGGGAGGAGTGGGGGCCTAGCATTGCTGTGGAGCTCGGAGGTCCGTTTCAGTCTCCTATCATACTCTCCCAATCACATAGATGGGTGGGTGGATGGAGGGGTGAGTCCGTGGCGGTTTTCTGGGATTTATGGTTTCCCCCAAGCGGAATTGAAGGTGAGGACATGGGCGCTGCTGAGGCACTTGCGTGGGAATCCAGGGACGCCGTGGTTGGTGGGTGGAGACTTCAATGCCATCTTGTCTCATCAGGAGAAGGATGGTGGTAGGGCTAAGGCTGAGGCTGAACTGGCGGGCTTCCAGGGTGCAATTGATGATTGTGAGCTGATTGACTTGGATTTCAGGGGTCCTGTTTTCACTTGGTGTAATGGGAGGCTGGGGGAGGAAACAGTTTGGGAGAGGATTGACAGATGTCTGAGCAATATGGCTTGGCAGGAGATGTTTCCAATGCATATGCTATCCCATCTGGACTTTAGTCGGTCGGACCATAGGCCTTTGCTGCTCGCGATGCCAGTTAATTCTCGGGTGGTTCGTAGCGCAGGTTAGAGGATTCGGAGGTTTGAGGAAACCTGGCTCCAGTCTCCTGATTTTGGGGAGGCAGTTTCAGCGGGTTGGAAGGCGAACCCTTCCATTACTTCTCCCGTGGAGTTGGCATCAGCTGCTTCCCGGTGTATGCTGCATCTGAGTAGATGGGGGAGGCCGAAGGATGGAAGTCTGGGTCAGCGTATCCGGGCTGCAACGTCGAATGTCCAGCAGGTGATGGGCAGGCTGGGATCTTCTGAATCTCGAGCAGACTTACAGAGGGCAGAGGAGCAATTAGAATCTCTTCTTGTAGAAGAGGAGGTGCACTGGAGGCAGAGGTCTAGGGATTGCTGGTTAAAATGGGGTGATAGAAATACCCGTTGGTTCCATTCCCGGGCCTCGCATAGAAGGAGGGTTAATACGATATAGGGTTTGGAGGATGGGAATGGAGTGTGGCAACAAGAACCGGACAGGGTGTTGGGCCTGATTGAGGGGTATTTTGAGAACATCTTTTCGACATCCTTCCCTTCTGAGGGTGAGATTGACCGGGTGACCTCTCGAGTTCCTCCTTCGGTTTCGAATGAGATGAATAACAGTCTCGTGCGGCCTTTTCAGCGTGACGAGGTTCTGCGAGCTATGAATCAGATCCATCCTAATAAATCTCCTGGACCGGATGGTTTGTCTGGGGCCTTTTACCAGCACTCTTGGACGGTAGTTGGATCTGATGTGGTTAATTGTTGTTTAAGCATCTTGAACAACAAATCCTCTCCAGCTCCTCTGAATGAAACGATGATTGTGTTGATCCCCAAAAAGAAGAGCCCCAGGTGTATCACGGATTACAGGCCAATCTCTTTGTGTAATGTTTCGTACAAAATTGTGTCCAAGGTCTTGGTGAACCGCATGAAGGGTATACTCAATGAGGTGATTTCCCACAATCAGAGTGCTTTTATTCCAGGGCGTTGTGTTGTTGATAATGCCATTCTGGGGTATGAATGCATTCACGCCCTGAAAGGGAAAAAGGTGGGGAGAACGGGGTGGGCCTCGCTTAAATTGGACATGAGCAAAGCCTATGACAGGGTAGAGTGGGTTTTCCTGGAGAAGATGATGCTGAGAATGGGGTTTGCAGTTGATTGGGTGGAGCTAGTGATGCGTTGCATATCGTCGGTCCGGTACTCATTTAATGTGAATGGTGTGAGGTGTAGGGATGTCATTCCTAGCAGAGGCCTTCGCCAGGGAGATCCGCTTTCTCCGTATCTGTTCTTGCTGTGTGCTGAAGGGCTCTCTCGTATGCTGCATGAGGCGGAAGGGGCAAAGATCATTACGGGGTTGAAGATAGCGCGTGGGTGTCCTGCTATCTCCCACTTGTTTTTTGCTGATGACAGCCTCCTCTTTTTTCGGGCTAAAGAAGGTGAAGCTCAAGCTGTGCATAACATCCTCCAGTGCTATGAGCGAGCTTCCGGGCAAACTATAAACTTTGATAAGTGTATCATCTCCTTCAGCCCGAGCACTGTAGTGGGTGTTCAGACTCAGGTGAGTCAGATTTTCCAGGTTCAAACAACGGCCTGTCATCGCCAGTATTTAGGTCTACCTTCTTTCATGCCCCGGAACAGAACAAGCACCCTTAGTTTCATTAAGGAGCGGGTTTGGCGTCAGATCCAGGGTTGGAAAGGTAAGTTTTTCTCTGTAGGGGGCAGGGAAGTGTTACTAAAGTCGATTGTGCAGGCCATCCCGTGCTACACTATGAATTGTTTCTGTTTGCCTAAAAAACTGATCCAAGATATCAGTAGGGCTATGGCGCGATTCTGGTGGAATGGGGATACGGAGGATAGAAGGATCCATTGGGTGAGTTGGAAGACATTGTGCAAGCCAAAATGTTTGGGTGGTATGGGTTTCAGAGATTTGGAAACGTTCAACCAAGCCCTCTTGGCCAAACAGTGTTGGAAGATTGTTCAGCACCCTTCCTCGTTTCTCTCCCGTGTGTTGAAGGGGCGGTATTTTCCCAGCGAGGACTTCCTGATTGCAAGGGTGGGGTCCCGCCCTTCGTATATTTGGAGGAGCCTGATTTGGGGGAGGGAGCTATAGGGAAAGGGTATTCGTTGGAGGGTTGGGAATGGGGAGAAAGTCAGTGTATATGGATCTAACTGGATTCCAGATGATTCCTGTCTCAGGGTACGGTCCCCGGTTACTTTGGATCTTGGTGCTCGAGTGGCTGATCTTCTTACTGCCTCGGGCCAGTGGAACGAGGAACTCCTGCGACATCATTTTAGGCCTCGTGAGGTACGCTCTATCCTCACTATCCCACTGCGGCATACTTCGTCTGAGGACAAAGTCATTTGGCATTTTGAGAAGTGTGGGATCTATACGGTTAAAAGTGGGTACCGGCTTGGCCAAATGGCTTTGTCTGCCCATGCTCCATCTTCGTCTTCGAGTGAGGCGTTGTCTAGCTGGTGGAAGGGGTGTTGGAAGATGGGGATCCCAAACAAAATCAAGGTTTTCTTTTGGAGGCTTTGTTTGGAGCGACTGCCTACTGTTGACAATTTGAGTACTAGGGGTGTTGATGTCTTGAATGTGTGTGTGCACTGTGGTTGGCATGGGGAGTCATGCATGCATTTGTTTTGGCAATGCAAATTTTTTCGTGAATTGTTGATGGGATCGGAGTGGGAGGTCTTGCTGCAGAATGTTCAGGCAAACTCTATGCTTAATCTGCTTAGGGACGTGAAGGACAGGGTCGACTGGGCTAAGTTTGAAGAGCTTGTGGTGGTGTTGTGGGCTGTATGGTGTTGCCGAAACCAACAAAAGTTTAGGGGGCGGGCTCCCTCAGCAGGGCTTGTGGATTGGGCGGTGAACTATCTGGCTGTTTTCCGAGGGGCCTCCCGGACGTATGGTGAGGGAGTTGGAGGGGTGCCTCGGAGTGCAGTGAAATGGTCCCCGCCGGAGGAGGGATGGTATAAGGCGAACGTGGATGCTGCATATTGTGGGGATCTGTCTCGAGCGGGTGCTGGAGTTGTTGTTCGGGATGAGGTGGGGCGAGTCATGCTGTCAGCTGCTGTTAGTCATGACCATGTGGGGAGTTCAGATTTGGCAGAGGGTCTAGCGGTGGTGGACGGAATGAGACTTGTGGTGGAGATGGATTTTGCTCAAGTTATCCTTGAGACTGATTCTATGCGGGTTTTTTCGCTGTTGCACGATTCTGCGATGGAGGATCTGTCTGAGTTTGGTGTTCTAGTTTCTGAGGCTCGAAGGGAGGTGTCTGCACATATGCAGTTCAGATTCAGCTTTACAAGAAGAGAAGGAAACCGGGTTGCCCATGAGCTAGCCCGCTTTGCATTGAGAGAGGGAGGTTGTGAGTATTGGATGGAATCGGTTCTGGCGTGTGCTTATCTTCCAGCTGAGGAGGATATTTTTTCCCTATAA

mRNA sequence

ATGAAGGCTAGGGTTCCGGTGAGCGAGCGTGCGGTGGAGGCGGCGATCGGTGAGCAAGGTGTGCGGCGCGGTGGGCGTGCGGCTGAGCAGAGGATTGATTCCGGCGTGAGCGTTGTGGTGAAGACGGTCGGATTGCAGGGATTTCCGTCGGTCTTGAGGCGGGTGGCTTTCTTCGGCGATTGGAGGTGGTGGTGCGGACGGTGGTCGGCTGAGGCGGCGGTTTCCAAGTGTGATTTTTTCGTTTTGCAGAAGTGGAAGTCGTGGTCACTTACCGGGGAGGAGGCGGAGGTGATACGTCCGGGTGCAGTTCCGTCTTCTCTGTCAGCGGCAGACTTGGATTTATGTGTGGGGGAGAAGTCGAGAGTTCTAGGTACTGGTCCTTGGGCCATTGACCGGTCCCTTATCGTGCTTAAGGAGCCAAAGGATGTTGCGTCGGTGCTAGAAACAGAGTTTAAAGATTGTCCTTTTTGGGTGCAGATTCATGATGTTCCTATGAAGTGGCAGACGAGAGGTTGGGCGCAGCATCTGGGAGGCAAGATTGGGGTGGTTGAGGAGGTGGGCGGCTCAAATGAGAATGATTGGATAGGCCCTATTCTGCGGTTCAGAGTTCGTCTTCGGTTGGACCGACCACTTCGAAGGGGGTTTCATATGCAGGATGATGATGGGAAGGACTCTTGGTGTCCAGTATTGTATGAGCGTCTTCCGGACTTCTGCTTTGGGTGTGGATGTTTAGGCCACTCGAGGCGGGAATGTGAAGGTGTGGGGGCGAGTTCTTCAGGTGTGGGGGAGGATCGGTATGGCGAGTGGCTGAGAGCAGGTGCCTTTCTTGGGGAGAGTTTCCGGCAGGATCCAGGTCAGGTAGGTGTAAAGGACAGTGGGAAGCAGCCCGTAGTGGAACCCACGCCTGTTTCAGGGGAGGTAGTAGGTCCTGTTCAGGGTGATGTGCATGAGAGGGAGACAGGGGTACCCGACAGCGTTGCTGGGGAGGAAGTGCCAGTTCCTGCTTTGGGTACATGGGCGGAGATTTGCACGGTGGAGGGAGGGAAGGAAGCTCAGGTCCGTTTCAGTCTCCTATCATACTCTCCCAATCACATAGATGGGTGGGTGGATGGAGGGGTGAGTCCGTGGCGGTTTTCTGGGATTTATGGTTTCCCCCAAGCGGAATTGAAGGTGAGGACATGGGCGCTGCTGAGGCACTTGCGTGGGAATCCAGGGACGCCGTGGTTGGTGGGTGGAGACTTCAATGCCATCTTGTCTCATCAGGAGAAGGATGGTGGTAGGGCTAAGGCTGAGGCTGAACTGGCGGGCTTCCAGGGTGCAATTGATGATTGTGAGCTGATTGACTTGGATTTCAGGGGTCCTGTTTTCACTTGGTGTAATGGGAGGCTGGGGGAGGAAACAGTTTGGGAGAGGATTGACAGATGTCTGAGCAATATGGCTTGGCAGGAGATGTTTCCAATGCATATGCTATCCCATCTGGACTTTACGGGTTGGAAGGCGAACCCTTCCATTACTTCTCCCGTGGAGTTGGCATCAGCTGCTTCCCGGTGTATGCTGCATCTGAGTAGATGGGGGAGGCCGAAGGATGGAAGTCTGGGTCAGCGTATCCGGGCTGCAACGTCGAATGTCCAGCAGGGTTTGGAGGATGGGAATGGAGTGTGGCAACAAGAACCGGACAGGGTGTTGGGCCTGATTGAGGGGTATTTTGAGAACATCTTTTCGACATCCTTCCCTTCTGAGGGTGAGATTGACCGGGTGACCTCTCGAGTTCCTCCTTCGGTTTCGAATGAGATGAATAACAGTCTCGTGCGGCCTTTTCAGCGTGACGAGGTTCTGCGAGCTATGAATCAGATCCATCCTAATAAATCTCCTGGACCGGATGGTTTGTCTGGGGCCTTTTACCAGCACTCTTGGACGGTAGTTGGATCTGATGTGGTTAATTGTTGTTTAAGCATCTTGAACAACAAATCCTCTCCAGCTCCTCTGAATGAAACGATGATTGTGTTGATCCCCAAAAAGAAGAGCCCCAGCCCGAGCACTGTAGTGGGTGTTCAGACTCAGGTGAGTCAGATTTTCCAGGTTCAAACAACGGCCTGTCATCGCCAGTATTTAGGGGCGGTATTTTCCCAGCGAGGACTTCCTGATTGCAAGGGTGGGGTCCCGCCCTTCGTATATTTGGAGGAGCCTGATTTGGGGGAGGGAGCTATAGGGAAAGGGGTACGGTCCCCGGTTACTTTGGATCTTGGTGCTCGAGTGGCTGATCTTCTTACTGCCTCGGGCCAGTGGAACGAGGAACTCCTGCGACATCATTTTAGGCCTCGTGAGGTACGCTCTATCCTCACTATCCCACTGCGGCATACTTCGTCTGAGGACAAAGTCATTTGGCATTTTGAGAAGTGTGGGATCTATACGGTTAAAAGTGGGTACCGGCTTGGCCAAATGGCTTTGTCTGCCCATGCTCCATCTTCGTCTTCGAGTGAGGCGTTGTCTAGCTGGTGGAAGGGGTGTTGGAAGATGGGGATCCCAAACAAAATCAAGGTTTTCTTTTGGAGGCTTTGTTTGGAGCGACTGCCTACTGTTGACAATTTGAGTACTAGGGGTGTTGATGTCTTGAATGTGTGTGTGCACTGTGGTTGGCATGGGGAGTCATGCATGCATTTGTTTTGGCAATGCAAATTTTTTCGTGAATTGTTGATGGGATCGGAGTGGGAGGTCTTGCTGCAGAATGTTCAGGCAAACTCTATGCTTAATCTGCTTAGGGACGTGAAGGACAGGGTCGACTGGGCTAAGTTTGAAGAGCTTGTGGTGGTGTTGTGGGCTGTATGGTGTTGCCGAAACCAACAAAAGTTTAGGGGGCGGGCTCCCTCAGCAGGGCTTGTGGATTGGGCGGTGAACTATCTGGCTGTTTTCCGAGGGGCCTCCCGGACGTATGGTGAGGGAGTTGGAGGGGTGCCTCGGAGTGCAGTGAAATGGTCCCCGCCGGAGGAGGGATGGTATAAGGCGAACGTGGATGCTGCATATTGTGGGGATCTGTCTCGAGCGGGTGCTGGAGTTGTTGTTCGGGATGAGGTGGGGCGAGTCATGCTGTCAGCTGCTGTTAGTCATGACCATGTGGGGAGTTCAGATTTGGCAGAGGGTCTAGCGGTGGTGGACGGAATGAGACTTGTGGTGGAGATGGATTTTGCTCAAGTTATCCTTGAGACTGATTCTATGCGGGTTTTTTCGCTGTTGCACGATTCTGCGATGGAGGATCTGTCTGAGTTTGGTGTTCTAGTTTCTGAGGCTCGAAGGGAGGTGTCTGCACATATGCAGTTCAGATTCAGCTTTACAAGAAGAGAAGGAAACCGGGTTGCCCATGAGCTAGCCCGCTTTGCATTGAGAGAGGGAGGTTGTGAGTATTGGATGGAATCGGTTCTGGCGTGTGCTTATCTTCCAGCTGAGGAGGATATTTTTTCCCTATAA

Coding sequence (CDS)

ATGAAGGCTAGGGTTCCGGTGAGCGAGCGTGCGGTGGAGGCGGCGATCGGTGAGCAAGGTGTGCGGCGCGGTGGGCGTGCGGCTGAGCAGAGGATTGATTCCGGCGTGAGCGTTGTGGTGAAGACGGTCGGATTGCAGGGATTTCCGTCGGTCTTGAGGCGGGTGGCTTTCTTCGGCGATTGGAGGTGGTGGTGCGGACGGTGGTCGGCTGAGGCGGCGGTTTCCAAGTGTGATTTTTTCGTTTTGCAGAAGTGGAAGTCGTGGTCACTTACCGGGGAGGAGGCGGAGGTGATACGTCCGGGTGCAGTTCCGTCTTCTCTGTCAGCGGCAGACTTGGATTTATGTGTGGGGGAGAAGTCGAGAGTTCTAGGTACTGGTCCTTGGGCCATTGACCGGTCCCTTATCGTGCTTAAGGAGCCAAAGGATGTTGCGTCGGTGCTAGAAACAGAGTTTAAAGATTGTCCTTTTTGGGTGCAGATTCATGATGTTCCTATGAAGTGGCAGACGAGAGGTTGGGCGCAGCATCTGGGAGGCAAGATTGGGGTGGTTGAGGAGGTGGGCGGCTCAAATGAGAATGATTGGATAGGCCCTATTCTGCGGTTCAGAGTTCGTCTTCGGTTGGACCGACCACTTCGAAGGGGGTTTCATATGCAGGATGATGATGGGAAGGACTCTTGGTGTCCAGTATTGTATGAGCGTCTTCCGGACTTCTGCTTTGGGTGTGGATGTTTAGGCCACTCGAGGCGGGAATGTGAAGGTGTGGGGGCGAGTTCTTCAGGTGTGGGGGAGGATCGGTATGGCGAGTGGCTGAGAGCAGGTGCCTTTCTTGGGGAGAGTTTCCGGCAGGATCCAGGTCAGGTAGGTGTAAAGGACAGTGGGAAGCAGCCCGTAGTGGAACCCACGCCTGTTTCAGGGGAGGTAGTAGGTCCTGTTCAGGGTGATGTGCATGAGAGGGAGACAGGGGTACCCGACAGCGTTGCTGGGGAGGAAGTGCCAGTTCCTGCTTTGGGTACATGGGCGGAGATTTGCACGGTGGAGGGAGGGAAGGAAGCTCAGGTCCGTTTCAGTCTCCTATCATACTCTCCCAATCACATAGATGGGTGGGTGGATGGAGGGGTGAGTCCGTGGCGGTTTTCTGGGATTTATGGTTTCCCCCAAGCGGAATTGAAGGTGAGGACATGGGCGCTGCTGAGGCACTTGCGTGGGAATCCAGGGACGCCGTGGTTGGTGGGTGGAGACTTCAATGCCATCTTGTCTCATCAGGAGAAGGATGGTGGTAGGGCTAAGGCTGAGGCTGAACTGGCGGGCTTCCAGGGTGCAATTGATGATTGTGAGCTGATTGACTTGGATTTCAGGGGTCCTGTTTTCACTTGGTGTAATGGGAGGCTGGGGGAGGAAACAGTTTGGGAGAGGATTGACAGATGTCTGAGCAATATGGCTTGGCAGGAGATGTTTCCAATGCATATGCTATCCCATCTGGACTTTACGGGTTGGAAGGCGAACCCTTCCATTACTTCTCCCGTGGAGTTGGCATCAGCTGCTTCCCGGTGTATGCTGCATCTGAGTAGATGGGGGAGGCCGAAGGATGGAAGTCTGGGTCAGCGTATCCGGGCTGCAACGTCGAATGTCCAGCAGGGTTTGGAGGATGGGAATGGAGTGTGGCAACAAGAACCGGACAGGGTGTTGGGCCTGATTGAGGGGTATTTTGAGAACATCTTTTCGACATCCTTCCCTTCTGAGGGTGAGATTGACCGGGTGACCTCTCGAGTTCCTCCTTCGGTTTCGAATGAGATGAATAACAGTCTCGTGCGGCCTTTTCAGCGTGACGAGGTTCTGCGAGCTATGAATCAGATCCATCCTAATAAATCTCCTGGACCGGATGGTTTGTCTGGGGCCTTTTACCAGCACTCTTGGACGGTAGTTGGATCTGATGTGGTTAATTGTTGTTTAAGCATCTTGAACAACAAATCCTCTCCAGCTCCTCTGAATGAAACGATGATTGTGTTGATCCCCAAAAAGAAGAGCCCCAGCCCGAGCACTGTAGTGGGTGTTCAGACTCAGGTGAGTCAGATTTTCCAGGTTCAAACAACGGCCTGTCATCGCCAGTATTTAGGGGCGGTATTTTCCCAGCGAGGACTTCCTGATTGCAAGGGTGGGGTCCCGCCCTTCGTATATTTGGAGGAGCCTGATTTGGGGGAGGGAGCTATAGGGAAAGGGGTACGGTCCCCGGTTACTTTGGATCTTGGTGCTCGAGTGGCTGATCTTCTTACTGCCTCGGGCCAGTGGAACGAGGAACTCCTGCGACATCATTTTAGGCCTCGTGAGGTACGCTCTATCCTCACTATCCCACTGCGGCATACTTCGTCTGAGGACAAAGTCATTTGGCATTTTGAGAAGTGTGGGATCTATACGGTTAAAAGTGGGTACCGGCTTGGCCAAATGGCTTTGTCTGCCCATGCTCCATCTTCGTCTTCGAGTGAGGCGTTGTCTAGCTGGTGGAAGGGGTGTTGGAAGATGGGGATCCCAAACAAAATCAAGGTTTTCTTTTGGAGGCTTTGTTTGGAGCGACTGCCTACTGTTGACAATTTGAGTACTAGGGGTGTTGATGTCTTGAATGTGTGTGTGCACTGTGGTTGGCATGGGGAGTCATGCATGCATTTGTTTTGGCAATGCAAATTTTTTCGTGAATTGTTGATGGGATCGGAGTGGGAGGTCTTGCTGCAGAATGTTCAGGCAAACTCTATGCTTAATCTGCTTAGGGACGTGAAGGACAGGGTCGACTGGGCTAAGTTTGAAGAGCTTGTGGTGGTGTTGTGGGCTGTATGGTGTTGCCGAAACCAACAAAAGTTTAGGGGGCGGGCTCCCTCAGCAGGGCTTGTGGATTGGGCGGTGAACTATCTGGCTGTTTTCCGAGGGGCCTCCCGGACGTATGGTGAGGGAGTTGGAGGGGTGCCTCGGAGTGCAGTGAAATGGTCCCCGCCGGAGGAGGGATGGTATAAGGCGAACGTGGATGCTGCATATTGTGGGGATCTGTCTCGAGCGGGTGCTGGAGTTGTTGTTCGGGATGAGGTGGGGCGAGTCATGCTGTCAGCTGCTGTTAGTCATGACCATGTGGGGAGTTCAGATTTGGCAGAGGGTCTAGCGGTGGTGGACGGAATGAGACTTGTGGTGGAGATGGATTTTGCTCAAGTTATCCTTGAGACTGATTCTATGCGGGTTTTTTCGCTGTTGCACGATTCTGCGATGGAGGATCTGTCTGAGTTTGGTGTTCTAGTTTCTGAGGCTCGAAGGGAGGTGTCTGCACATATGCAGTTCAGATTCAGCTTTACAAGAAGAGAAGGAAACCGGGTTGCCCATGAGCTAGCCCGCTTTGCATTGAGAGAGGGAGGTTGTGAGTATTGGATGGAATCGGTTCTGGCGTGTGCTTATCTTCCAGCTGAGGAGGATATTTTTTCCCTATAA

Protein sequence

MKARVPVSERAVEAAIGEQGVRRGGRAAEQRIDSGVSVVVKTVGLQGFPSVLRRVAFFGDWRWWCGRWSAEAAVSKCDFFVLQKWKSWSLTGEEAEVIRPGAVPSSLSAADLDLCVGEKSRVLGTGPWAIDRSLIVLKEPKDVASVLETEFKDCPFWVQIHDVPMKWQTRGWAQHLGGKIGVVEEVGGSNENDWIGPILRFRVRLRLDRPLRRGFHMQDDDGKDSWCPVLYERLPDFCFGCGCLGHSRRECEGVGASSSGVGEDRYGEWLRAGAFLGESFRQDPGQVGVKDSGKQPVVEPTPVSGEVVGPVQGDVHERETGVPDSVAGEEVPVPALGTWAEICTVEGGKEAQVRFSLLSYSPNHIDGWVDGGVSPWRFSGIYGFPQAELKVRTWALLRHLRGNPGTPWLVGGDFNAILSHQEKDGGRAKAEAELAGFQGAIDDCELIDLDFRGPVFTWCNGRLGEETVWERIDRCLSNMAWQEMFPMHMLSHLDFTGWKANPSITSPVELASAASRCMLHLSRWGRPKDGSLGQRIRAATSNVQQGLEDGNGVWQQEPDRVLGLIEGYFENIFSTSFPSEGEIDRVTSRVPPSVSNEMNNSLVRPFQRDEVLRAMNQIHPNKSPGPDGLSGAFYQHSWTVVGSDVVNCCLSILNNKSSPAPLNETMIVLIPKKKSPSPSTVVGVQTQVSQIFQVQTTACHRQYLGAVFSQRGLPDCKGGVPPFVYLEEPDLGEGAIGKGVRSPVTLDLGARVADLLTASGQWNEELLRHHFRPREVRSILTIPLRHTSSEDKVIWHFEKCGIYTVKSGYRLGQMALSAHAPSSSSSEALSSWWKGCWKMGIPNKIKVFFWRLCLERLPTVDNLSTRGVDVLNVCVHCGWHGESCMHLFWQCKFFRELLMGSEWEVLLQNVQANSMLNLLRDVKDRVDWAKFEELVVVLWAVWCCRNQQKFRGRAPSAGLVDWAVNYLAVFRGASRTYGEGVGGVPRSAVKWSPPEEGWYKANVDAAYCGDLSRAGAGVVVRDEVGRVMLSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMDFAQVILETDSMRVFSLLHDSAMEDLSEFGVLVSEARREVSAHMQFRFSFTRREGNRVAHELARFALREGGCEYWMESVLACAYLPAEEDIFSL

Homology

[Close]

BLAST of Lcy12g010230 vs. ExPASy Swiss-Prot
Match: P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 4.8e-06
Identity = 34/126 (26.98%), Postives = 56/126 (44.44%), Query Frame = 0


Query: 548 EDGNGVWQQEPDRVLGLIEGYFENIFSTSFPSEGEIDRVTSRVPPSVSNEMNNSLVRPFQ 607
           EDG  +  ++P+ +      +++N+FS    S    + +   + P VS      L  P  
Sbjct: 394 EDGTPL--EDPEAIRDRARSFYQNLFSPDPISPDACEELWDGL-PVVSERRKERLETPIT 453

Query: 608 RDEVLRAMNQIHPNKSPGPDGLSGAFYQHSWTVVGSDVVNCCLSILNNKSSPAPLNETMI 667
            DE+ +A+  +  NKSPG DGL+  F+Q  W  +G D              P      ++
Sbjct: 454 LDELSQALRLMPHNKSPGLDGLTIEFFQFFWDTLGPDFHRVLTEAFKKGELPLSCRRAVL 513

Query: 668 VLIPKK 674
            L+PKK
Sbjct: 514 SLLPKK 516

[Close]

BLAST of Lcy12g010230 vs. ExPASy Swiss-Prot
Match: P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.1e-05
Identity = 35/140 (25.00%), Postives = 64/140 (45.71%), Query Frame = 0


Query: 534 QRIRAATSNVQQGLEDGNGVWQQEPDRVLGLIEGYFENIFSTSFPSEGEIDRVTSRVP-P 593
           +R+++  S+++    +GN     +P  +  ++  Y++ ++S  + +  EID+       P
Sbjct: 383 KRVKSLISSIR----NGNDEITTDPSEIQKILNEYYKKLYSHKYENLKEIDQYLEACHLP 442

Query: 594 SVSNEMNNSLVRPFQRDEVLRAMNQIHPNKSPGPDGLSGAFYQHSWTVVGSDVVNCCLSI 653
            +S +    L RP    E+   +  +   KSPGPDG +  FYQ     +   ++N   +I
Sbjct: 443 RLSQKEVEMLNRPISSSEIASTIQNLPKKKSPGPDGFTSEFYQTFKEELVPILLNLFQNI 502

Query: 654 LNNKSSPAPLNETMIVLIPK 673
                 P    E  I LIPK
Sbjct: 503 EKEGILPNTFYEANITLIPK 518

[Close]

BLAST of Lcy12g010230 vs. ExPASy Swiss-Prot
Match: O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 2.4e-05
Identity = 33/127 (25.98%), Postives = 59/127 (46.46%), Query Frame = 0


Query: 547 LEDGNGVWQQEPDRVLGLIEGYFENIFSTSFPSEGEIDR-VTSRVPPSVSNEMNNSLVRP 606
           +++  G    +P  +   I  Y++++++    +  E+D  + +   P ++ E   SL RP
Sbjct: 393 IKNDKGDITTDPTEIQTTIREYYKHLYANKLENLEEMDTFLDTYTLPRLNQEEVESLNRP 452

Query: 607 FQRDEVLRAMNQIHPNKSPGPDGLSGAFYQHSWTVVGSDVVNCCLSILNNKSSPAPLNET 666
               E++  +N +   KSPGPDG +  FYQ     +   ++    SI      P    E 
Sbjct: 453 ITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEKEGILPNSFYEA 512

Query: 667 MIVLIPK 673
            I+LIPK
Sbjct: 513 SIILIPK 519

[Close]

BLAST of Lcy12g010230 vs. ExPASy Swiss-Prot
Match: P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)

HSP 1 Score: 50.8 bits (120), Expect = 1.2e-04
Identity = 33/127 (25.98%), Postives = 58/127 (45.67%), Query Frame = 0


Query: 557 EPDRVLGLIEGYFENIFSTSFPSEGEIDRVTSRVP-PSVSNEMNNSLVRPFQRDEVLRAM 616
           +P+ +   I  +++ ++ST   +  E+D+   R   P ++ +  + L  P    E+   +
Sbjct: 410 DPEEIQNTIRSFYKRLYSTKLENLDEMDKFLDRYQVPKLNQDQVDHLNSPISPKEIEAVI 469

Query: 617 NQIHPNKSPGPDGLSGAFYQHSWTVVGSDVVNCCLSILN----NKSSPAPLNETMIVLIP 676
           N +   KSPGPDG S  FYQ        D++     + +      + P    E  I LIP
Sbjct: 470 NSLPTKKSPGPDGFSAEFYQ----TFKEDLIPILHKLFHKIEVEGTLPNSFYEATITLIP 529

Query: 677 K-KKSPS 678
           K +K P+
Sbjct: 530 KPQKDPT 532

[Close]

BLAST of Lcy12g010230 vs. ExPASy TrEMBL
Match: A0A2N9FHJ0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS18179 PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.1e-87
Identity = 321/1321 (24.30%), Postives = 468/1321 (35.43%), Query Frame = 0


Query: 134  LIVLKEPKDVASVLETEFKDCPFWVQIHDVPMKWQTRGWAQHLGGKIGVVEEVGGSNEND 193
            LI  +E  D+  + +  F    FWVQIH++P+    R  A  LGG IG V       E  
Sbjct: 74   LIEFEEAADL-ELEDLPFNLVDFWVQIHNLPVLSMKRRVAIALGGYIGEVLPTSLQEEEV 133

Query: 194  WIGPILRFRVRLRLDRPLRRGFHMQDDDGKDSWCPVLYERLPDFCFGCGCLGHSRRECEG 253
              G  +R RVR+ + +PL RG  +   +  + W    YERLP+FC+ CG   HS R+CE 
Sbjct: 134  GTGKYMRVRVRVDITKPLCRGKKIGLGNDTEGWVSFQYERLPNFCYWCGIPTHSERDCEE 193

Query: 254  VGASSSGVGED--RYGEWLRAGAFLGESFRQDPGQVGVKDSGKQ-------PVVEPTP-- 313
               +   + E    YG WLRA    GE   +   QV V+ S ++       P   P P  
Sbjct: 194  WLRTPVHLREQPMEYGIWLRAA---GERITRRV-QVTVQGSNRRANGVRRNPAASPKPNP 253

Query: 314  -----------------------------------------------------------V 373
                                                                       +
Sbjct: 254  PPPPPPTTNPPSVDSPITDMEVSENLVPDHIPADSMAANPMSFEDQLRDIDVAINYNPVI 313

Query: 374  SGE--------------------VVGPVQGDVHERETGVPDS------VAGEEVPVPALG 433
            SG                      +GP+    H  +T  P S         E    P  G
Sbjct: 314  SGVQMSNANFHMEPVIPAEPNELYMGPLNPTTHPNQTRAPLSEISNQWTTPETQSKPKTG 373

Query: 434  TWA---------------------------EICTVEGGKEA-----QVRFSLLSYSPNHI 493
             W                            ++   EGG  A      +   + SYS +HI
Sbjct: 374  QWKKKARSKAPTTTTSPIILAEKRSNTEAFQVPITEGGGLALFWSNDLNVFIKSYSCSHI 433

Query: 494  DGWVDGGVS-PWRFSGIYGFPQAELKVRTWALLRHLRGNPGTPWLVGGDFNAILSHQEKD 553
            D  ++ G+S  WRF+G+YG P+   +  TW LLR L G    PW   GDFN ++  +E  
Sbjct: 434  DAVINEGMSDAWRFTGVYGAPETHNRSETWDLLRRLNGLYQLPWCCLGDFNEVVKLEEMH 493

Query: 554  GGRAKAEAELAGFQGAIDDCELIDLDFRGPVFTWCNGRLGEETVWERIDRCLSNMAWQEM 613
            G   +   ++  F+  +DDC L+DL F G  FTWCN R    T W R+DR ++   W   
Sbjct: 494  GRHLRPAHQMQAFRDVLDDCGLVDLGFNGFPFTWCNNRDPPNTTWVRLDRAVATTDWLMR 553

Query: 614  FPMHMLSHLD------------------------------------------FTGWKANP 673
            +P   + H+D                                             W    
Sbjct: 554  YPCARVDHVDVIKSDHKCLWLVCEPKNSRNPKRRPFRFEEMWLSDSGCEQTIMEAWSNTR 613

Query: 674  SITSPVELASAASRCMLHLSRWGRPKDGSLGQRIRAATSNVQQ----------------- 733
              T+  ++      C   L  W R K G++G++I    + ++Q                 
Sbjct: 614  PGTAMFQVTHKLKECKFQLGSWSREKFGNIGKQIEETKTELKQAEASALHGINHNHLQSL 673

Query: 734  ------------------------------------------------GLEDGNGVWQQE 793
                                                            GL+D  G W   
Sbjct: 674  RQKLNSLFEKEEKMWRQRSRSLWLANGDRNTKYFHSRATQRHRRNHIHGLKDDLGRWHDT 733

Query: 794  PDRVLGLIEGYFENIFSTSFPSEGEIDRVTSRVPPSVSNEMNNSLVRPFQRDEVLRAMNQ 853
             D +  L+  Y+ ++F+TS P   +I    + VP  V+ +MN +L+R F   EV  A+ Q
Sbjct: 734  NDGMASLLIKYYTSLFTTSHPD--QIAEAVTHVPHVVTEDMNKALIREFTAPEVELALKQ 793

Query: 854  IHPNKSPGPDG----------LSGAFYQHSWTVVGSD------------------VVNCC 913
            + P K+PGPDG               Y H    +G D                    N C
Sbjct: 794  MAPTKAPGPDGRLITDNVLVAFETLHYMHH-NKIGRDGAMALKLDMNDSLLFSRATPNAC 853

Query: 914  LSILN-----NKSSPAPLNETMIVLIPKKKSPSPSTVVGVQTQVSQIFQVQTTACHRQYL 973
              I        K+S   +N     +   K SP  S     Q  + +   V     + +YL
Sbjct: 854  EKIQGILAQYEKASGQQVNRDKATIYFSKNSPETS-----QHIIKEALAVPIIRQYEKYL 913

Query: 974  G----------AVFSQ---RGLPDCKGGVPPFVYLEEPDLGEGAIGKGV---RSPVTL-- 1033
            G          A F+Q   R     KG     +     ++   A+ + +   + P  L  
Sbjct: 914  GLPSLVGRNRAASFTQIKERVWQKLKGWKEKLLSQAGREILIKAVAQAIPCFKLPAKLCN 973

Query: 1034 ----------------------------------------DLGARVADLLTASGQWNEEL 1093
                                                    DL      LL    +W+  L
Sbjct: 974  ELEAMVRRFWWSNNPEHRKIHWVAWRKLCQPKYKGGMGFRDLRKFNDALLAKQMKWDTAL 1033

Query: 1094 LRHHFRPREVRSILTIPLRHTSSEDKVIWHFEKCGIYTVKSGYRLGQMALSAHAPSSSSS 1127
            + + F   +  +I  IPL +    DK+IW     G YTV+SGYR          P SS  
Sbjct: 1034 IDNLFCSYDADAIKQIPLSNHYHADKIIWPSNTNGEYTVRSGYRFLVEDAEKSLPGSSMP 1093

[Close]

BLAST of Lcy12g010230 vs. ExPASy TrEMBL
Match: A0A2N9J109 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58001 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 8.2e-86
Identity = 362/1530 (23.66%), Postives = 518/1530 (33.86%), Query Frame = 0


Query: 121  RVLGTGPWAIDRSLIVLKEPKDVASVLETEFKDCPFWVQIHDVPMKWQTRGWAQHLGGKI 180
            RVL   PW  D+ +I+ K  ++  +V    F   P WVQIH +P++  +R  A  +G  +
Sbjct: 85   RVLSNEPWTYDKYVILFKRVEEDVAVETIMFSSVPIWVQIHGLPLRRLSREVALDMGSSL 144

Query: 181  G-----VVEEVGGSNENDWIGPILRFRVRLRLDRPLRRGFHMQDDDGKDSWCPVLYERLP 240
            G     V EE   S+EN       R +VRL + + L RG  ++       W    YERLP
Sbjct: 145  GQVIPYVSEEEERSSENK-----PRIKVRLDITQSLCRGRRVKWGKDNSGWISFKYERLP 204

Query: 241  DFCFGCGCLGHSRRECEGVGASSSGVGED--RYGEWLRA-------GAFLGESFRQDP-- 300
            +FC+ CG L H  ++C   G     V  D  ++G WLRA        +++    R++P  
Sbjct: 205  NFCYQCGLLTHGDKDCPETGDHHKEVSSDQAQFGPWLRAEPEKPHRKSWVSVEGRRNPYR 264

Query: 301  -----------GQVGVKDSGKQPVVEPTPVSGE------VVGPVQGDVHER--------- 360
                          G K   KQP  E T +  E       V P+    +E+         
Sbjct: 265  PPSPPAKTSSVSPEGGKPMRKQPGPEATDMETEENPGFDTVDPIILQTNEKSFVDQLREI 324

Query: 361  ------------------ETGVPDSV------AGEEVPVP--ALGTWA-----EICTVE- 420
                              E  +P  V        E+ P     + TWA     E+  V+ 
Sbjct: 325  DRAFNFRMGTCMDKPGVIEDDLPKLVQELAQMVREKDPTALFLIETWADDPQLEVLRVQF 384

Query: 421  -------------GGKEA-----QVRFSLLSYSPNHIDGWVDGGVS-PWRFSGIYGFPQA 480
                         GG  A      +   + SYS +HID  V    S PW F+G YG P  
Sbjct: 385  HFHNKLVVPRRNKGGGLALFWKQDLDLQIASYSYSHIDTIVGATSSAPWCFTGFYGAPDT 444

Query: 481  ELKVRTWALLRHLRGNPGTPWLVGGDFNAILSHQEKDGGRAKAEAELAGFQGAIDDCELI 540
              +  +W LLR L+G    PW  GGDFN I+  +EK G  +K ++++  F+ A+D C  I
Sbjct: 445  HKREESWNLLRFLKGQYDLPWCCGGDFNEIVRIEEKKGRISKPDSQMQPFRDALDTCGFI 504

Query: 541  DLDFRGPVFTWCNGRLGEETVWERIDRCLSNMAWQEMFPMHMLSHLDFTG---------- 600
            DL + G  FTWCN R    TVWER+D+ ++   W  +FP   + HLD+TG          
Sbjct: 505  DLGYIGAPFTWCNNRFSGATVWERLDQLVATSEWLAIFPQARVFHLDYTGSDHKPLWLSP 564

Query: 601  -------------------------------WKANPSITSPVELASAASRCMLHLSRWGR 660
                                           WKA+ S      + S  + C  +L  W +
Sbjct: 565  KSNHNLRAAKPFWFEEMWMSDLGCAETIANSWKASSSGNHMFWVISKLNHCRKNLKTWSK 624

Query: 661  PKDGSLGQR-------IRAATSNVQQ---------------------------------- 720
               GS+ ++       ++ A  N  Q                                  
Sbjct: 625  SNFGSIRKQLQDKRRELKLAEENAMQGESSVPIHSLRQEVGRLLAKEERMWRQRSRSQWL 684

Query: 721  ------------------------GLEDGNGVWQQEPDRVLGLIEGYFENIFSTSFPSEG 780
                                    GL D +GVW+ E D++  L+  YF++IF TS PS  
Sbjct: 685  KYGDRNTSFFHSRATHRQRRNLIVGLRDTDGVWRTEQDQIQTLLTSYFQSIFLTSNPS-- 744

Query: 781  EIDRVTSRVPPSVSNEMNNSLVRPFQRDEVLRAMNQIHPNKSPGPDGLSGAFYQHSWTVV 840
             ID V   VP  V++ MN +L +P+   EV  A+ Q+ P  +PGPDGL   FYQ+ W ++
Sbjct: 745  SIDTVLQCVPTLVTDSMNEALTKPYTASEVEFALRQMAPLTAPGPDGLPPVFYQNHWHLI 804

Query: 841  GSDVVNCCLSILNNKSSPAPLNETMIVLIPKKKSP------------------------- 900
            G DV+   LS LN+      +N T I LIPK K+P                         
Sbjct: 805  GEDVIRGVLSSLNSGKLVRSINHTNITLIPKVKNPEKVSEFRPISLCNVLYKIISKVVAN 864

Query: 901  ------------------------------------------------------------ 960
                                                                        
Sbjct: 865  RLKVILPHLISETQSAFVLGRLITDNILVAFETLHHMQSTRQGKRGHMALKLDMSKAYDR 924

Query: 961  ------------------------------------------------------------ 1020
                                                                        
Sbjct: 925  VEWSFLSSLMGKLGFNHKFIDLIMECISTVSYSILINGIPHGNFTPSRGIRQGDPLSPYL 984

Query: 1021 -----------------------------------------------SPSTVVGVQTQVS 1080
                                                           S +T +  Q  + 
Sbjct: 985  FILCAEDDSLLFCRASRVECQNIQAILSLYETASGQQLNRDKTSLYFSKNTPLSAQEAIK 1044

Query: 1081 QIFQVQTTACHRQYLG----------AVFSQ---RGLPDCKG------------------ 1126
                V T   + +YLG          A FSQ   R     KG                  
Sbjct: 1045 LQLNVPTIQSYEKYLGLPSFIGRQKKACFSQIKERVWSKLKGWKEKLLSQSGRETLIKVV 1104

[Close]

BLAST of Lcy12g010230 vs. ExPASy TrEMBL
Match: A0A2N9I921 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS48455 PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 4.1e-85
Identity = 356/1608 (22.14%), Postives = 538/1608 (33.46%), Query Frame = 0


Query: 121  RVLGTGPWAIDRSLIVLKEPKDVASVLETEFKDCPFWVQIHDVPMKWQTRGWAQHLGGKI 180
            RVL   PW  D+ +I+ K  ++ A+V    F   P WVQ+H +P++  +R  A  +G  I
Sbjct: 154  RVLANEPWTYDKYVILFKRVEEDAAVENIMFSSVPIWVQLHGLPIRCLSREVAMDMGSLI 213

Query: 181  G-------VVEEVGGSNENDWIGPILRFRVRLRLDRPLRRGFHMQDDDGKDSWCPVLYER 240
            G       V EE  G N+        R +VRL + +PL RG  ++    +  W    YER
Sbjct: 214  GQVIPYTSVEEERSGENKP-------RIKVRLDITQPLCRGRRVKLGKDRSGWIAFKYER 273

Query: 241  LPDFCFGCGCLGHSRRECEGVGASSSGVGED--RYGEWLRAG-------AFLGESFRQDP 300
            LP+FC+ CG L H  ++C            D  ++G WLRA        +++    R++P
Sbjct: 274  LPNFCYQCGLLTHGDKDCSETSKRPCAGSSDQAQFGPWLRADLENSHRKSWVTVEGRRNP 333

Query: 301  GQ----------------------VGVKDSGKQ--------------------------- 360
             Q                       G ++S  +                           
Sbjct: 334  FQRPPQPDKDSQAPPAARKSMRKPAGTEESDMETEENQEFDLVDPRLPSMNAKDFDENLR 393

Query: 361  ---------------------------------------------------PVVEPTPV- 420
                                                               P +EPT + 
Sbjct: 394  EIDRALNFGHNACMDNISVINGDPTNENSHHQPHNPTNPRPAQPNLTINHNPPIEPTRIP 453

Query: 421  ------SGEVVGPVQGD-VHERETGVPDSVAGEEVPVPA--------------------- 480
                  +     P Q   V +R      ++   E+ +PA                     
Sbjct: 454  FRDILNTSPPPKPTQAQPVWKRIPRQQHTLLSPEITLPAKRAVSPIAVTEEVRRKRHEVF 513

Query: 481  ----------------------LGTWAEICTVE-------------------GGKEA--- 540
                                  + TWA+   +E                   GG  A   
Sbjct: 514  CVEDVQELAKMVREQDPSALCLIETWADEPQLELIRVQLHFSNKLVVPRRNKGGGLALFW 573

Query: 541  --QVRFSLLSYSPNHIDGWVDGGVS-PWRFSGIYGFPQAELKVRTWALLRHLRGNPGTPW 600
               +   + SYS +HID  VD     PWRF+  YG P++  +  +W LLR+L G    PW
Sbjct: 574  KQTLDLQISSYSYSHIDTIVDAASGVPWRFTAFYGAPESHRRELSWNLLRYLHGQFDLPW 633

Query: 601  LVGGDFNAILSHQEKDGGRAKAEAELAGFQGAIDDCELIDLDFRGPVFTWCNGRLGEETV 660
              GGDFN I+  +EK G  +K E+++  F+ A+DDC  +DL + G  FTWCN R    TV
Sbjct: 634  CCGGDFNEIVRLEEKQGQISKPESQMLSFREALDDCGFVDLGYIGAPFTWCNNRFSGATV 693

Query: 661  WERIDRCLSNMAWQEMFPMHMLSHLDFTG------------------------------- 720
            WER+DR +++ AW   FP   + HLD+TG                               
Sbjct: 694  WERLDRVVASTAWLSRFPQARVYHLDYTGSDHKPLWLSPTHARNRPVAKPFRFEEMWMTD 753

Query: 721  ----------WKANPSITSPVELASAASRCMLHLSRWGRPKDGSL--------------- 780
                      W++  +  S  ++ +  + C   L  W +   GS+               
Sbjct: 754  SGCAETISTAWQSPSNGNSMYQVITKLNHCRNQLKNWSKSHFGSVRKQLQEKREELKVAE 813

Query: 781  -----GQ-----------------------RIRAATSNVQQ------------------- 840
                 GQ                       R R+ T  ++Q                   
Sbjct: 814  EKSMQGQSPDLIPSLRAEVSILLSKEERMWRQRSRTQWLKQGDRNTNFFHTRATHRQRRN 873

Query: 841  ---GLEDGNGVWQQEPDRVLGLIEGYFENIFSTSFPSEGEIDRVTSRVPPSVSNEMNNSL 900
               GL D +G WQ +PD+V  ++  YF+NIF +S PS   ID V   +P  +S+ +N +L
Sbjct: 874  SIVGLRDSDGEWQTDPDQVQSILISYFQNIFLSSNPS--SIDTVLQCIPTLISDSLNEAL 933

Query: 901  VRPFQRDEVLRAMNQIHPNKSPGPDGLSGAFYQHSWTVVGSDVVNCCLSILNNKSSPAPL 960
             RP+   EV  A+ Q+ P  +PGPDGL   F+Q+ W ++G+DVV   LS LN+      +
Sbjct: 934  SRPYTATEVETALRQMAPLTAPGPDGLPPIFFQNHWHLIGADVVRGVLSSLNSGKLVRSI 993

Query: 961  NETMIVLIPKKKSPSP-----------------STVVGVQTQVS--QIFQVQTTACHRQ- 1020
            N T I LIPK K+P                   S V+  + +V+   +  +Q+T   RQ 
Sbjct: 994  NHTNITLIPKVKNPERVSEYRPISLCNVLYKIISKVIANRLKVAFETLHHMQSTRHGRQG 1053

Query: 1021 ------------------YLGAVFSQRG--------LPDC-------------------- 1080
                              +L ++  + G        + +C                    
Sbjct: 1054 HMALKLDMSKAYDRVEWAFLASIMGKMGFNNKFIDLILECISTVSYSILINGIPHGNFTP 1113

Query: 1081 ----KGGVPPFVYLEE-----------------PDLGEGAIGK----------------- 1139
                + G P   YL +                 P L E A G+                 
Sbjct: 1114 TRGIRQGDPLSPYLRQSSFLQSNPSRMPKHPGHPLLYEAASGQQLNREKTTLYFSKNTTQ 1173

[Close]

BLAST of Lcy12g010230 vs. ExPASy TrEMBL
Match: A0A2N9J7Z2 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS61378 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 1.2e-84
Identity = 303/1207 (25.10%), Postives = 486/1207 (40.27%), Query Frame = 0


Query: 121  RVLGTGPWAIDRSLIVLKEPKDVASVLETEFKDCPFWVQIHDVPMKWQTRGWAQHLGGKI 180
            RVL   PW+ D+ LI  +  ++  +V E  F    FWVQ+H++P+    +  A+ LG  I
Sbjct: 61   RVLLGEPWSYDKYLIAFQRVREGTAVEELPFNKVDFWVQLHNLPILCMKKAVAEQLGRSI 120

Query: 181  GVVEEVGGSNENDWIGPILRFRVRLRLDRPLRRGFHMQDDDGKDSWCPVLYERLPDFCFG 240
            G V      +E    G  +R RVR+ + RPL RG  +   +G + W    YERLP+FC+ 
Sbjct: 121  GEVVRTQVHDEESGSGRYMRIRVRVDISRPLCRGRRIGLTNGGEGWVSFRYERLPNFCYW 180

Query: 241  CGCLGHSRRECEG----VGASSSGVGEDRYGEWLRAGAFLGESFRQDPGQVGVKDSGK-- 300
            CG   H  ++CE       A  + + E  +GEWLRA      + R+   Q+ V+  G+  
Sbjct: 181  CGIPTHGEKDCEAWLKTGDAEKAKIPE--FGEWLRASQ--ERAIRR--VQIKVEGWGRGA 240

Query: 301  --------QPVVEPTPVSGEVVGPVQGDVHERETGVPDSVAGEEVPVPAL------GTWA 360
                    QP +  +  +       Q D  + ET        E   +PA           
Sbjct: 241  GAGTGTAPQPTLSTSKTALAQPPQRQSDPTDMETAEYPGRDTETAVIPAKKHATFDDQLR 300

Query: 361  EICTVEGGKEAQVRFSLLSYSPNHIDGWV-DGGVSPWRFSGIYGFPQAELKVRTWALLRH 420
            EI            FS    + NHID  + +G    WR +G+YG  + + +  TW LLRH
Sbjct: 301  EIDLAINYVPGIPIFSESINNNNHIDAIIREGTADGWRLTGVYGALETQKREETWVLLRH 360

Query: 421  LRGNPGTPWLVGGDFNAILSHQEKDGGRAKAEAELAGFQGAIDDCELIDLDFRGPVFTWC 480
            L      PW   GDFN I+  +E  G  ++ + ++ GF+ A+D+  L+DL FRG  FTW 
Sbjct: 361  LASMSQLPWCCIGDFNEIVKLEEMKGSHSRPDRQMKGFRSALDEYGLVDLRFRGFPFTWS 420

Query: 481  NGRLGEETVWERIDRCLSNMAWQEMFPMHMLSHLDFTG------W-KANPSITS-----P 540
            N +    T W R+DR ++ M W ++FP  M+ H+D         W   +P +T+     P
Sbjct: 421  NNKDPPFTTWVRLDRAVATMEWIQLFPRAMVEHVDVAKSDHKCLWLSCSPPVTTRPKRRP 480

Query: 541  VELASA------------------------------ASRCMLHLSRWGRPKDGSLGQRIR 600
                 A                                 C + LS W R   GS+ ++I 
Sbjct: 481  FRFEEAWMTDVGCEEIIRKVWDSSYRGTRMFSVWQKIQECKIQLSSWSRSHFGSIKKKIE 540

Query: 601  AATSNVQQ---------------------GLEDGNGVWQQEPDRVLGLIEGYFENIFSTS 660
            A    + Q                     GL D    W +  + +  L+  Y+ N+F+TS
Sbjct: 541  ALKLKIHQVETQAVQDRSLLRDVEEILSPGLWDERSGWHETNEEMAILMTEYYNNLFTTS 600

Query: 661  FPSEGEIDRVTSRVPPSVSNEMNNSLVRPFQRDEVLRAMNQIHPNKSPGPDGLSGAFYQH 720
             P    +    S +P  V+  MNN L++ F+ DEV +A+ Q+ P+K+PGPDG+   FYQ 
Sbjct: 601  HPP--NLVEAVSDIPKVVTEAMNNILIQDFRADEVEQAIKQMSPSKAPGPDGMPPIFYQK 660

Query: 721  SWTVVGSDVVNCCLSILNNKSSPAPLNETMIVLIPKKKSPSPSTVVGVQTQVSQIFQ-VQ 780
             W V+GSDV++  LS LN+      +N T I LIPK K+P   T     +  + I++ V 
Sbjct: 661  YWHVLGSDVISAVLSCLNSGCLLKSINHTFITLIPKVKNPEKVTDFRPISLCNVIYKLVS 720

Query: 781  TTACHRQYLGAVFSQRGLPDCKGGVPPFVYLEEPDLGEGAIGKGVRSPVTLDLGARVADL 840
                +R  L               + P V  E     + A   G               L
Sbjct: 721  KVLANRLKL---------------ILPQVISE----SQSAFVPG--------------RL 780

Query: 841  LTASGQWNEELLRH-HFRPREVRSILTIPLRHTSSEDKVIWHF-----EKCGIYTVKSGY 900
            +T +     E L H H         + + L  + + D+V W +     +K G +    G 
Sbjct: 781  ITDNVLVAFETLHHMHHNKMGREGAMALKLDMSKAYDRVEWKYLVEVMQKMGFHQKWIGL 840

Query: 901  RLGQMALSAHAPSSSSSEALSSWWKGCWKMGIPNKIKVFFWRLCLERLPTVDNLSTRGVD 960
                ++  +++   +     +       + G P  +  + + LC E L ++   +    D
Sbjct: 841  MFECISTVSYSILINGEPHGNILPSRGLRQGDP--LSPYLFLLCAEGLHSLIKKAESSGD 900

Query: 961  VLNVCVHCGWHGESCMHLFW--QCKFFRELLMGS--EWEVLLQNVQANSMLNLLRD---- 1020
            +  V +  G  G    HLF+      F +  + +  + +++L+  +  S   + RD    
Sbjct: 901  IQGVSLCRG--GPKITHLFFADDSLLFTKATIAACDKIQLILRQYERASGQQVNRDKTTI 960

Query: 1021 -------------VKDRVD--------------------------------WAKF----E 1080
                         +KD +D                                W K     E
Sbjct: 961  FFSKAVPTTTQNAIKDTLDVPIIRQYEKYLGLPSLIGRGRAESFTQIKERVWHKLKGWKE 1020

Query: 1081 ELV---------------VVLWAVWCCRNQQK------------FRGRAPSAGLVDWAVN 1139
            +L+               +  +++ C R   K            +    P    ++W V 
Sbjct: 1021 KLLSQARREVLIKAVAQAIPAYSMSCFRLPTKLCQDIEAMIRRFWWSNNPDQRKINW-VR 1080

[Close]

BLAST of Lcy12g010230 vs. ExPASy TrEMBL
Match: A0A6J1DAR4 (uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018954 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 3.8e-83
Identity = 310/1228 (25.24%), Postives = 453/1228 (36.89%), Query Frame = 0


Query: 217  MQDDDGKDSWCPVLYERLPDFCFGCGCLGHSRRECEGVGASSSGVGEDRYGEWLRAGAFL 276
            +Q  DGKD WCP+ YE+LPDFC+ CG +GHS RE E      +  G  +YG WLRA    
Sbjct: 3    IQTTDGKDLWCPLRYEKLPDFCYECGRMGHSGREHEQRPPEGTFNGSAQYGSWLRASLLK 62

Query: 277  GESFRQDPG------------QVGVKDSGKQPVVEPTPVSGEVVGPVQGDVHERETGVPD 336
                 QD              Q G    G+          GE + P        + G   
Sbjct: 63   KNLMNQDEEWEQRGGRSSRGFQRGSGRGGRGEWSRSGEYWGEQIQPEHSHGRPEDDGASQ 122

Query: 337  SVAGE------EVPVPALGTWAEICTVEGGKEAQVRFSLLSYSPNHIDGWVDGGV-SPWR 396
             +  E      EVP+ A    AE                 S  P+ +      GV + + 
Sbjct: 123  PMNREPDAGKMEVPLVAARIMAE-----------------SLLPHLLQSKGCNGVETTFN 182

Query: 397  FSGIYGFPQAELKVRTWALLRHLRGNPGTPWLVGGDFNAILSHQEKDGGRAKAEAELAGF 456
                    Q  L +  W   R+  GN                       R + +      
Sbjct: 183  IEKGMKLNQCVLSLVHWG--RNKTGN----------------------FRNRLKVAEVML 242

Query: 457  QGAIDDCELI-DLDFRGPVFTWCNGRLGEETV-WERIDRCLSNMAWQEMFPMHMLSHLDF 516
            Q AI D     + +      T  N  L EE + W +  R L    W +        H D 
Sbjct: 243  QSAIHDLPFAPNREAFQQAITNMNQLLKEEEIFWRQRSRDL----WHK--------HGD- 302

Query: 517  TGWKANPSITSPVELASAASRCMLHLSRWGRPKDGSLGQRIRAATSNVQQGLEDGNGVWQ 576
                                      ++W   K        R  T+ + +GL D  G W+
Sbjct: 303  ------------------------RNTKWFHTKASH-----RRRTNEI-KGLLDQQGTWE 362

Query: 577  QEPDRVLGLIEGYFENIFSTSFPSEGEIDRVTSRVPPSVSNEMNNSLVRPFQRDEVLRAM 636
            +   +V+G+IE YF  +FS+S PS   I++VT  +   VS+  N  L++PF  +E++ A+
Sbjct: 363  ENKFKVVGMIESYFTELFSSSRPSVSIIEQVTGCIEARVSSGHNCDLLKPFCEEEMIMAL 422

Query: 637  NQIHPNKSPGPDGLSGAFYQHSWTVVGSDVVNCCLSILNNKSSPAPLNETMI-----VLI 696
            +QIHP+K+ GPD  S AFY++ W +VG DV  CCL+ILNN      L+E ++      +I
Sbjct: 423  HQIHPHKALGPDRFSSAFYKNFWHIVGQDVSCCCLNILNNSMDMKTLSEMILKRALDTVI 482

Query: 697  PKKKSP-------SPSTVVGVQ-------------------------------------- 756
             + +S        + + ++G +                                      
Sbjct: 483  SQSQSAFIPNRYITDNAILGFESLKLDMSKAYDRVEWNFLEAVMLKMGFDFRWKVYQTYC 542

Query: 757  ------------------------------------------------------------ 816
                                                                        
Sbjct: 543  NVLQIERVLRDYVSRVGALLLLTFSLLMIVSYFLRLVGGKVSVAEIAYRKCTGQALIKLP 602

Query: 817  -------TQVSQIFQVQTTACHRQYLG-----------------------------AVFS 876
                   + +  I  V    C  QYLG                              +FS
Sbjct: 603  EYQDRQSSLIQNILSVNMVECQLQYLGLPTFMPRNRRMHFNYIKDRVWKHLQGWKAKLFS 662

Query: 877  QRG--------------------------------------------------------- 936
              G                                                         
Sbjct: 663  IGGKEVLIKAVAQAIPCYTMSCFRLPKRLIREFHHITARFWWGSSKEDKKIHWVAWNSLY 722

Query: 937  LPDCKGGV--------------------------------------------------PP 996
            LP C+GG+                                                  P 
Sbjct: 723  LPKCEGGMGFRDLELFNKALLAKQCWRILNHPNSMLSRVLKGRYFKDCSFMEAKISGNPS 782

Query: 997  FVYLEEPDLGEGAIGKGVR--------------------------SPVTLDLGARVADLL 1056
            +++      G   + KG+R                          S   L L +RV+ L+
Sbjct: 783  YIW-RSILWGRDLLKKGLRWRIGNGDSVFIYGDNWVPNQPTLKILSSPRLPLVSRVSSLV 842

Query: 1057 T-ASGQWNEELLRHHFRPREVRSILTIPLRHTSSEDKVIWHFEKCGIYTVKSGYRLGQM- 1116
                G W  +++R  F P E + IL+IP+   + ED++IW++EK G+Y+V+SGY++  + 
Sbjct: 843  DHEEGGWQGDVVRDEFTPDEAKGILSIPIGRGAEEDRLIWNYEKTGVYSVRSGYKVALLN 902

Query: 1117 ALSAHAPSSSSSEALSSWWKGCWKMGIPNKIKVFFWRLCLERLPTVDNLSTRGVDVLNVC 1137
                 APSSSSSE +  WW G WKM IPNKIKVF WRLCL+RLPT  NLS RGV++ N C
Sbjct: 903  NPCVQAPSSSSSEEVRCWWNGFWKMHIPNKIKVFLWRLCLDRLPTGCNLSKRGVEITNCC 962

[Close]

BLAST of Lcy12g010230 vs. NCBI nr
Match: XP_022150918.1 (uncharacterized protein LOC111018954 [Momordica charantia])

HSP 1 Score: 320.1 bits (819), Expect = 7.9e-83
Identity = 310/1228 (25.24%), Postives = 453/1228 (36.89%), Query Frame = 0


Query: 217  MQDDDGKDSWCPVLYERLPDFCFGCGCLGHSRRECEGVGASSSGVGEDRYGEWLRAGAFL 276
            +Q  DGKD WCP+ YE+LPDFC+ CG +GHS RE E      +  G  +YG WLRA    
Sbjct: 3    IQTTDGKDLWCPLRYEKLPDFCYECGRMGHSGREHEQRPPEGTFNGSAQYGSWLRASLLK 62

Query: 277  GESFRQDPG------------QVGVKDSGKQPVVEPTPVSGEVVGPVQGDVHERETGVPD 336
                 QD              Q G    G+          GE + P        + G   
Sbjct: 63   KNLMNQDEEWEQRGGRSSRGFQRGSGRGGRGEWSRSGEYWGEQIQPEHSHGRPEDDGASQ 122

Query: 337  SVAGE------EVPVPALGTWAEICTVEGGKEAQVRFSLLSYSPNHIDGWVDGGV-SPWR 396
             +  E      EVP+ A    AE                 S  P+ +      GV + + 
Sbjct: 123  PMNREPDAGKMEVPLVAARIMAE-----------------SLLPHLLQSKGCNGVETTFN 182

Query: 397  FSGIYGFPQAELKVRTWALLRHLRGNPGTPWLVGGDFNAILSHQEKDGGRAKAEAELAGF 456
                    Q  L +  W   R+  GN                       R + +      
Sbjct: 183  IEKGMKLNQCVLSLVHWG--RNKTGN----------------------FRNRLKVAEVML 242

Query: 457  QGAIDDCELI-DLDFRGPVFTWCNGRLGEETV-WERIDRCLSNMAWQEMFPMHMLSHLDF 516
            Q AI D     + +      T  N  L EE + W +  R L    W +        H D 
Sbjct: 243  QSAIHDLPFAPNREAFQQAITNMNQLLKEEEIFWRQRSRDL----WHK--------HGD- 302

Query: 517  TGWKANPSITSPVELASAASRCMLHLSRWGRPKDGSLGQRIRAATSNVQQGLEDGNGVWQ 576
                                      ++W   K        R  T+ + +GL D  G W+
Sbjct: 303  ------------------------RNTKWFHTKASH-----RRRTNEI-KGLLDQQGTWE 362

Query: 577  QEPDRVLGLIEGYFENIFSTSFPSEGEIDRVTSRVPPSVSNEMNNSLVRPFQRDEVLRAM 636
            +   +V+G+IE YF  +FS+S PS   I++VT  +   VS+  N  L++PF  +E++ A+
Sbjct: 363  ENKFKVVGMIESYFTELFSSSRPSVSIIEQVTGCIEARVSSGHNCDLLKPFCEEEMIMAL 422

Query: 637  NQIHPNKSPGPDGLSGAFYQHSWTVVGSDVVNCCLSILNNKSSPAPLNETMI-----VLI 696
            +QIHP+K+ GPD  S AFY++ W +VG DV  CCL+ILNN      L+E ++      +I
Sbjct: 423  HQIHPHKALGPDRFSSAFYKNFWHIVGQDVSCCCLNILNNSMDMKTLSEMILKRALDTVI 482

Query: 697  PKKKSP-------SPSTVVGVQ-------------------------------------- 756
             + +S        + + ++G +                                      
Sbjct: 483  SQSQSAFIPNRYITDNAILGFESLKLDMSKAYDRVEWNFLEAVMLKMGFDFRWKVYQTYC 542

Query: 757  ------------------------------------------------------------ 816
                                                                        
Sbjct: 543  NVLQIERVLRDYVSRVGALLLLTFSLLMIVSYFLRLVGGKVSVAEIAYRKCTGQALIKLP 602

Query: 817  -------TQVSQIFQVQTTACHRQYLG-----------------------------AVFS 876
                   + +  I  V    C  QYLG                              +FS
Sbjct: 603  EYQDRQSSLIQNILSVNMVECQLQYLGLPTFMPRNRRMHFNYIKDRVWKHLQGWKAKLFS 662

Query: 877  QRG--------------------------------------------------------- 936
              G                                                         
Sbjct: 663  IGGKEVLIKAVAQAIPCYTMSCFRLPKRLIREFHHITARFWWGSSKEDKKIHWVAWNSLY 722

Query: 937  LPDCKGGV--------------------------------------------------PP 996
            LP C+GG+                                                  P 
Sbjct: 723  LPKCEGGMGFRDLELFNKALLAKQCWRILNHPNSMLSRVLKGRYFKDCSFMEAKISGNPS 782

Query: 997  FVYLEEPDLGEGAIGKGVR--------------------------SPVTLDLGARVADLL 1056
            +++      G   + KG+R                          S   L L +RV+ L+
Sbjct: 783  YIW-RSILWGRDLLKKGLRWRIGNGDSVFIYGDNWVPNQPTLKILSSPRLPLVSRVSSLV 842

Query: 1057 T-ASGQWNEELLRHHFRPREVRSILTIPLRHTSSEDKVIWHFEKCGIYTVKSGYRLGQM- 1116
                G W  +++R  F P E + IL+IP+   + ED++IW++EK G+Y+V+SGY++  + 
Sbjct: 843  DHEEGGWQGDVVRDEFTPDEAKGILSIPIGRGAEEDRLIWNYEKTGVYSVRSGYKVALLN 902

Query: 1117 ALSAHAPSSSSSEALSSWWKGCWKMGIPNKIKVFFWRLCLERLPTVDNLSTRGVDVLNVC 1137
                 APSSSSSE +  WW G WKM IPNKIKVF WRLCL+RLPT  NLS RGV++ N C
Sbjct: 903  NPCVQAPSSSSSEEVRCWWNGFWKMHIPNKIKVFLWRLCLDRLPTGCNLSKRGVEITNCC 962

[Close]

BLAST of Lcy12g010230 vs. NCBI nr
Match: XP_030946032.1 (uncharacterized protein LOC115970553 [Quercus lobata])

HSP 1 Score: 306.2 bits (783), Expect = 1.2e-78
Identity = 290/1081 (26.83%), Postives = 413/1081 (38.21%), Query Frame = 0


Query: 324  DSVAGEEVPVPA-LGTWAEIC--TVEGG----KEAQVRFSLLSYSPNHIDGWVDGGV-SP 383
            D    EEV V   LG   E+C  T  GG     +  + FSL ++SPNHIDG V+ G    
Sbjct: 40   DKARLEEVRVRLNLGGMIEVCRETKGGGIVIFWKKGIDFSLDTFSPNHIDGIVNKGTEDE 99

Query: 384  WRFSGIYGFPQAELKVRTWALLRHLRGNPGTPWLVGGDFNAILSHQEKDGGRAKAEAELA 443
            WRF+G YG  +      +W+ LR L+     PWL  GDFN I    EK GGR +   ++ 
Sbjct: 100  WRFTGFYGEAETANHHLSWSCLRRLKNRNAIPWLCAGDFNEITRSHEKLGGRIRPGRQME 159

Query: 444  GFQGAIDDCELIDLDFRGPVFTWCNGRLGEETVWERIDRCLSNMAWQEMFPMHMLSHLDF 503
             F+  +D+C   DL   G  FTWCNG     T+WER+DR ++ M W   FP   + HL++
Sbjct: 160  DFRAVLDECGFRDL---GGKFTWCNGHPDGFTLWERLDRAVATMDWLGKFPATKVIHLEY 219

Query: 504  TG--------------------------WKANPSITSPVELASAASRCMLHLSRWGRPKD 563
                                        W         VE   AA  C +      R + 
Sbjct: 220  GSSDHKPILICLNGVPKFRNKPWRFEHMWLEEEGCRDTVE---AAWGCDVPSQAMARVEG 279

Query: 564  GSLGQRIRAATS-----NVQQGLEDGNGVWQQEPDRVLGLIEGYFENIFSTSFPSEGEID 623
             S  +   +  S     N  + LE+  G   ++ + +  ++   ++N+F +S P   +I+
Sbjct: 280  DSNTRYFHSKASHRFRRNRIEALENHRGEKCEDENGIANILVESYQNLFDSSLPD--QIE 339

Query: 624  RVTSRVPPSVSNEMNNSLVRPFQRDEVLRAMNQIHPNKSPGPDGLSGAFYQHSWTVVGSD 683
                  P  VS EMN +LV PF+R EV  A+ Q+ P K+ GPDG+   F+QH W  +G D
Sbjct: 340  EALEATPTVVSEEMNQTLVAPFERGEVELALKQMDPLKATGPDGMPPLFFQHFWPAIGDD 399

Query: 684  VVNCCLSILNNKSSPAPLNETMIVLIPKKKSP---------------------------- 743
            VV   L+ LN+ S P+ +N+T I LIPK KSP                            
Sbjct: 400  VVEAVLTCLNSGSIPSLINQTFITLIPKVKSPVRVSDYRPVALCNTLYKLISKVLANRLK 459

Query: 744  --SPSTVVGVQT------QVSQIFQVQTTACHRQ-------------------------- 803
               P  +   Q+       +S    V     H                            
Sbjct: 460  TVLPCFISDTQSAFQSSKAISDNILVAFKTLHHMKNQKSKKGGFMALKLDMSKTYDWVGW 519

Query: 804  -YLGAVFSQRGLPD--------CKGGV--------------------------PPFVYL- 863
             YL  +  + G  D        C   V                           P+++L 
Sbjct: 520  VYLVKIMEKLGFCDKWVSLVYECISSVSYSILVNGEPRGDIRPSRGLRQGDPLSPYLFLL 579

Query: 864  -------------EEPDL------------------------------------------ 923
                          E DL                                          
Sbjct: 580  CSEGLNRMLQRAAAEDDLQVIQDILSLYEKASGQKLNREKTTIFFSKAVQGDTKTQLSNF 639

Query: 924  ----------------------------------------------------------GE 983
                                                                      G 
Sbjct: 640  LQVWRLLKDHNSLFFRVFKAKYFPNGSIFEAHAAGGSYAWQSILKARRVISMGMRWRIGN 699

Query: 984  GAI----------GKG---VRSPVTLDL-GARVADLLTASGQ-WNEELLRHHFRPREVRS 1043
            G            GKG   + SP +  L GA VA L+ +  +  ++ +L+ HF   EV  
Sbjct: 700  GESINVYTDSWLPGKGSAKILSPRSGGLDGAWVAALINSDTRTCDQNVLQQHFLSFEVSH 759

Query: 1044 ILTIPLRHTSSEDKVIWHFEKCGIYTVKSGYRLGQMALSAHAPSSSSSEALSSWWKGCWK 1103
            I  IPL  T  ED +IW   K G Y+VK+GY+L   + +  A SSS S   + +WK  WK
Sbjct: 760  IKAIPLCWTDQEDCLIWPRCKDGNYSVKTGYQLLCESETVDAASSSDSSKQTLFWKCVWK 819

Query: 1104 MGIPNKIKVFFWRLCLERLPTVDNLSTRGVDVLNVCVHCGWHGESCMHLFWQCKFFRELL 1139
            + IPNKIKVF WR+C   LPT++NL  R +     C  C    E   +  W C+  R + 
Sbjct: 820  LQIPNKIKVFLWRVCSNALPTLENLKRRKIMEDAKCKACLAAEEDAFYAIWGCEKLRHIW 879

[Close]

BLAST of Lcy12g010230 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 301.2 bits (770), Expect = 3.8e-77
Identity = 312/1391 (22.43%), Postives = 500/1391 (35.95%), Query Frame = 0


Query: 118  EKSRVLGTGPWAIDRSLIVLKEPKDVASVLETEFKDCPFWVQIHDVPMKWQTRGWAQHLG 177
            +++++  +GPW  DR+L+++ +P  +    E +F   P WV+  D+P+   TR  A  LG
Sbjct: 91   DRNKIYKSGPWTFDRTLVLINKPVALIPPSELDFTKLPIWVRFFDLPLGCITRDMAIRLG 150

Query: 178  GKIGVVEEVGGSNEN-DWIGPILRFRVRLRLDRPLRRGFHMQ-DDDGKDSWCPVLYERLP 237
              +G  EE    + N DW G  LR RV L + +PLRRG  +  D     +W P+ YERLP
Sbjct: 151  NALGGFEEADCDDLNPDW-GSNLRVRVMLDISKPLRRGIKLNLDGPIGGAWIPIQYERLP 210

Query: 238  DFCFGCGCLGHSRRECEGVGASSSGVGEDRYGEWLRAGAFL------------------- 297
            DFC+ CG L  SR+             + +YG WLR    +                   
Sbjct: 211  DFCYHCG-LSSSRK-------------KHQYGSWLRYQGTVKPTMPQMKQPQEDLLDKSG 270

Query: 298  GESFRQDPGQVGVKDSGKQPVVEPTPVSGEVVGPVQGDVHER-ETGVPDSVAGEEVPVPA 357
              SF      VG    G    V+  P +G +  P++  V E  + G   S  G+   +  
Sbjct: 271  NNSFSSSTSPVGAGSQG----VQSAPATGPIAIPMESPVTETPKKGAEPSQQGKSPVLID 330

Query: 358  LGTWAEICTVEGGKEAQVRFSLLSYSPNHIDGWVDGGVSP---WRFSGIYGFPQAELKVR 417
             G               ++    S  P++ D      +SP    RF+G YG P A  +  
Sbjct: 331  EGEQRINVKEISNLNPPLKSGAPSMQPSYSDSLTRMDLSPGFSGRFTGFYGHPAAHKRHL 390

Query: 418  TWALLRHLRGNPGTPWLVGGDFNAILSHQEKDGGRAKAEAELAGFQGAIDDCELIDLDFR 477
            TW LLR +     +PWL+GGD NAIL + E     +   +++  F+  +D C L D+ F+
Sbjct: 391  TWELLRRISNLDASPWLIGGDMNAILWNYEASYTSSYDTSQIEAFRNIMDACSLTDMGFK 450

Query: 478  GPVFTWCNGRLGEETVWERIDRCLSNMAWQEMFPMHMLSHLDFTG-WK---ANPSITSPV 537
            G +FTWCN R   + +W+R+DR L N  +  +FP       D +G W     N S +  +
Sbjct: 451  GGIFTWCNNRFAGDQLWKRLDRFLCNDTFNYVFP-------DASGHWSNATHNYSFSDSI 510

Query: 538  ELASAASRCMLHLSRWGRPKDGSLGQRIRAATSNV----QQGLEDGNGVWQQEPDRVLGL 597
            + +S+A      L  WGR     L ++I+A  + +     Q L     +     + + GL
Sbjct: 511  QASSSA------LRHWGRSNVWDLFKQIKAQKAAIIDAYNQPLPLDFTIIHALENDLAGL 570

Query: 598  IEGYFENIFSTSFPSEG------------EIDRVTSRVPPSVSNEMNNSLVRPFQRDEVL 657
            +E   E IF      E             +I+ + + +P  +++E+N  L+ P+ ++E+ 
Sbjct: 571  LE--LEEIFWKQRSREDWLKWGIAILNALDIEAIINLIPTRITSEVNEQLLAPYTKEEIE 630

Query: 658  RAMNQIHPNKSPGPDGLSGAFYQHSWTVVGSDVVNCCLSILNNKSSPAPLNETMIVLIPK 717
             A+ Q+ P K+ GPDG    FYQ  W VVG   +  CL+ LNN       N T I LIPK
Sbjct: 631  LAIRQMFPTKALGPDGFPALFYQTYWHVVGPKTLEACLNALNNGDDIKKWNSTYIALIPK 690

Query: 718  KKSP------------------------------------------------SPSTVVG- 777
             K P                                                S + ++G 
Sbjct: 691  IKQPRSISDFRPISLCNVSYKIISKSITNRLKNVIGLVISDAQSAFVPSRAISDNVIIGH 750

Query: 778  ------------------VQTQVSQIF--------------------------------- 837
                              ++  +S+ F                                 
Sbjct: 751  ECLHTINSCKSGLIGMAALKLDLSKAFDRVEWTYLECIMRKMGFNEGWIQAIIQCISTVR 810

Query: 838  --------------------------------------------------------QVQT 897
                                                                    +  T
Sbjct: 811  FSIHLNGSPGGCFQPSRGIRQGDPLSPYLFLLCAEGLSALINHENNSGRLTGIHFEENNT 870

Query: 898  TACH-----------------------------------------------------RQY 957
            +  H                                                     +QY
Sbjct: 871  SITHLLFADDSLIFLRSLESECLALRRLLDSYGRASGQCINFSKSALLFSPNVHPERQQY 930

Query: 958  LGAVFSQR---------GLP---------------------------------DCKGGVP 1017
            L  + + +         GLP                                 D +G   
Sbjct: 931  LQCILNVKLVSHFGNYLGLPSHFTRRRGESRKLHWMKWGRMCYPKECGGLNFRDLEGFNQ 990

Query: 1018 PFV------YLEEPDL----------------------------------GEGAIGKGVR 1077
              V      +L+ P+L                                  G   + KG+R
Sbjct: 991  ALVAKHVWRFLQHPNLLVSKVLKHKYFKDTSLLQASNNSKSSYFWKGFLWGRDLLVKGLR 1050

Query: 1078 -----------------------SPVTLDLGA---RVADLLTASGQWNEELLRHHFRPRE 1136
                                    P+  + GA    VA  +TA G W+   + H F   +
Sbjct: 1051 LRVGNGSTIKAFSDPWLPRPTTFKPLRFNNGALDTTVASFITADGNWDVTSISHSFCNED 1110

[Close]

BLAST of Lcy12g010230 vs. NCBI nr
Match: XP_024037590.1 (uncharacterized protein LOC112097210 [Citrus clementina])

HSP 1 Score: 300.1 bits (767), Expect = 8.5e-77
Identity = 279/1123 (24.84%), Postives = 432/1123 (38.47%), Query Frame = 0


Query: 352  QVRFSLLSYSPNHIDG---WVDGGVSPWRFSGIYGFPQAELKVRTWALLRHLRGNPGTPW 411
            +V  +++SYS +HID     VDG +  WR SGIYG P+   K  TW LLR L G    PW
Sbjct: 29   EVDVNIISYSNHHIDAVIHGVDGKI--WRCSGIYGHPETIQKRHTWTLLRRLAGMFTWPW 88

Query: 412  LVGGDFNAILSHQEKDGGRAKAEAELAGFQGAIDDCELIDLDFRGPVFTWCNGRLGEETV 471
            L  GDFN IL   EK GG+ +    +A F+  ++DC LIDL  RG  FTW N R G + +
Sbjct: 89   LCFGDFNEILHPNEKLGGKDRNLDMVAAFRETVNDCNLIDLGCRGYPFTWSNRRFGPQLI 148

Query: 472  WERIDRCLSNMAWQEMFPMHMLSHLD------------------FTGWKANPSIT----- 531
             ER+DR L +  W++     ++S+LD                  F  +K N S       
Sbjct: 149  EERLDRFLGSKDWEQSPYNLIVSNLDTWCSDHSPVMLEMQERNKFAWYKKNSSPRVFYED 208

Query: 532  -------------------------SPVEL-ASAASRCMLHLSRWGRPK-DG-------- 591
                                      PV +    ++ C+  L  W R + DG        
Sbjct: 209  MWSHYEVCKNIVKEEWLKGGSWSQGDPVTIFKKTSNNCLAQLRIWSRNEFDGQKEKLKQL 268

Query: 592  ---------SLGQR-----IRAATSNVQQGLEDGNGVWQQ-------------------- 651
                     +  QR     I++    +++ L D    W+Q                    
Sbjct: 269  KKKLSEMKHNFTQREEVSEIKSTEEQIEKMLLDEEVYWKQRSRADWLKEGDKNTKYFHSK 328

Query: 652  -----EPDRVLGLIE-----------------GYFENIFSTSFPSEGEIDRVTSRVPPSV 711
                   +R+ G+++                  YF ++F+TS PSE +I+   + + P V
Sbjct: 329  ASSRKRKNRIWGVMDQHDVWVDDREGVEKQFCEYFASLFTTSSPSEKQIEAALAGLKPRV 388

Query: 712  SNEMNNSLVRPFQRDEVLRAMNQIHPNKSPGPDGLSGAFYQHSWTVVGSDVVNCCLSILN 771
            + EMNN L  PF  +EV  A++Q+ P K+PGPDGL  AF+Q  W  V   V++ CL ILN
Sbjct: 389  TLEMNNQLDSPFTEEEVSTALSQMCPTKAPGPDGLPAAFFQKHWDSVKLGVISTCLHILN 448

Query: 772  NKSSPAPL---------------------------NETMIV------------------- 831
             + + + L                           ++++I                    
Sbjct: 449  GREAFSNLLVQAEQQRHIHGIHFGKDAKVSHLLFADDSLIFTRAAVEDCKHLKALFECYG 508

Query: 832  -----LIPKKKSP---SPSTVVGVQTQVSQIFQVQTTACHRQYLG--------------- 891
                 +   +KS    S  T     T +S+IFQ++  + H +YLG               
Sbjct: 509  KASGQIFNFEKSSMFFSKGTRNDQITAISEIFQLKVVSRHEKYLGLPSMIGRKTKSFFNE 568

Query: 892  --------------------------------------AVF------------------- 951
                                                  +VF                   
Sbjct: 569  VKLRVLNKISSWQHKFFTSGGKEVLIKAVAQAIPTYAMSVFKIPLGLCEDIQKAMARFWW 628

Query: 952  ----SQRGL----------PDCKGGV---------------------------------- 1011
                 ++G+             +GG+                                  
Sbjct: 629  GTKQDRKGIHWARWERISHSKARGGMGFRDLSSFNQALVAKQGWRIMQFPSSLVARVLKA 688

Query: 1012 ----------------PPFVYLE----EPDLGEGA---IGKG----------VRSPVT-- 1071
                            P FV+         L +GA   IG G          +  P T  
Sbjct: 689  RYFKHTGFMNAGLGSKPSFVWRSIVWGRQVLHKGARWRIGNGQNVLVYGNNWIPRPTTFK 748

Query: 1072 ------LDLGARVADLLTASGQWNEELLRHHFRPREVRSILTIPLRHTSSEDKVIWHFEK 1131
                  +     VA+L+    QW E+L+  HFRP +  +I+ IPL     ED++IWH++K
Sbjct: 749  PISAPSMGTDTTVAELIDEKQQWREDLILQHFRPEDAEAIMQIPLPKRPKEDQLIWHYDK 808

Query: 1132 CGIYTVKSGYRLGQMALSAHAPSSSSSEALSSWWKGCWKMGIPNKIKVFFWRLCLERLPT 1139
             G Y+VKSGY++         PS S+ +   + W+  WK+ IP K+K+F WR   + LPT
Sbjct: 809  KGYYSVKSGYQVAMRIKFPEDPSCSNHD--QNLWRFIWKLAIPEKVKIFLWRAAHDLLPT 868

[Close]

BLAST of Lcy12g010230 vs. NCBI nr
Match: XP_023908468.1 (uncharacterized protein LOC112020138 [Quercus suber])

HSP 1 Score: 295.0 bits (754), Expect = 2.7e-75
Identity = 259/1002 (25.85%), Postives = 361/1002 (36.03%), Query Frame = 0


Query: 352  QVRFSLLSYSPNHIDGWVD-GGVSPWRFSGIYGFPQAELKVRTWALLRHLRGNPGTPWLV 411
            +V FSL ++SPNHIDG ++ G    WRF+G YG  +      +WA LR LRG    PWL 
Sbjct: 75   EVDFSLGTFSPNHIDGVLNKGKEDEWRFTGFYGESETSNHYLSWACLRRLRGRNSIPWLC 134

Query: 412  GGDFNAILSHQEKDGGRAKAEAELAGFQGAIDDCELIDLDFRGPVFTWCNGRLGEETVWE 471
             GDFN I    EK GGR +   ++  F+  +D+C   DL F G  FTWCNG     T+WE
Sbjct: 135  AGDFNEIARSHEKLGGRQRPARQMEEFRDVLDECGFRDLGFTGGKFTWCNGHPDGFTIWE 194

Query: 472  RIDRCLSNMAWQEMFPMHMLSHLDF----------------------------------- 531
            R+DR ++ M W + FP   + HL+                                    
Sbjct: 195  RLDRAVATMEWLDKFPATKVIHLECGSSDHKPILICLKGIPKIRQKPWRFEHMWLEEEGC 254

Query: 532  -----TGWKANPSITSPVELASAASRCMLHLSRWGRPKDGSLGQ---------------- 591
                 T W  N    +   +    S     L  W R   G++ +                
Sbjct: 255  RDTVETAWLFNAPGQAMTRVEGKISHFQTQLKWWSRVVIGNITRLLMEKKKLLRKAEEEA 314

Query: 592  -------RIRAATSNVQQGLEDGNGVWQQEPDRVLGLIEG-------------------- 651
                   R+      +   L     +W+Q   R L L EG                    
Sbjct: 315  IRGRSINRVTRLKREINDLLSKEEKMWKQR-SRELWLHEGDKNTRYFHSRATHRFRRNKI 374

Query: 652  -----------------------YFENIFSTSFPSEGEIDRVTSRVPPSVSNEMNNSLVR 711
                                   +++N+F++S P+   I+      P  V+ EMN+ LV 
Sbjct: 375  EELENHLGERCVDENGIANILVDFYQNLFASSSPN--RIEEALEATPRVVTEEMNHELVA 434

Query: 712  PFQRDEVLRAMNQIHPNKSPGPDGLSGAFYQHSWTVVGSDVVNCCLSILNNKSSPAPLNE 771
            PF R EV  A+NQ+ P KSPGPDG+   F+Q  W+V+G++V    L+ LN  S P  +N 
Sbjct: 435  PFGRAEVDIALNQMDPLKSPGPDGMPPLFFQQFWSVIGNEVAEAVLTCLNTGSIPPSINR 494

Query: 772  TMIVLIPKKKSP----------------------------------------SPSTVVGV 831
            T I LIPK KSP                                        S +     
Sbjct: 495  TFITLIPKVKSPVRVSEYRPIALYLQAIQDILSLYEQASGQKLNREKTTIFFSKAVNEDT 554

Query: 832  QTQVSQIFQVQTTACHRQYLG-----------------------------AVFSQRG--- 891
            + Q+S   QV     + +YLG                              + SQ G   
Sbjct: 555  KAQLSDFLQVPEVKEYEKYLGLPAVVGRNRKASLNFIKERVWSKLQGWKEKLLSQAGREV 614

Query: 892  ------------------------------------------------------LPDCKG 951
                                                                   P  +G
Sbjct: 615  LLKAVVQAIPTFAMGCFKLPMGLCQEIEALIRKFFWGKKGEQRKIHWKKWEVLCQPKSEG 674

Query: 952  GVPPFVYLEEPD------------------------------------------------ 1011
            G+  F  LE+ +                                                
Sbjct: 675  GL-GFKDLEKFNDAMLAKQVWRLLKDKSSLFYRVFKAKYFPRGSIFEASTTTGSYAWQSI 734

Query: 1012 --------------LGEGAI----------GKG---VRSPVTLDL-GARVADLLTASGQ- 1043
                          +G+G            GKG   + SP    L GA+VA L+  + + 
Sbjct: 735  IKSRKVILMGMRWRIGDGKSINIYGENWLPGKGSARIVSPQVAALKGAQVAALINPNTRS 794

[Close]

BLAST of Lcy12g010230 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 111.7 bits (278), Expect = 4.0e-24
Identity = 93/389 (23.91%), Postives = 165/389 (42.42%), Query Frame = 0


Query: 762  WNEELLRHHFRPREVRSILTIPLRHTSSEDKVIWHFEKCGIYTVKSGYRLGQMALSAHAP 821
            W++  +       +   I  I L  +   DK+IW++   G YTV+SGY L     S + P
Sbjct: 88   WDDSKISQFVDQSDHGFIHRIYLAKSKKPDKIIWNYNTTGEYTVRSGYWLLTHDPSTNIP 147

Query: 822  SSSSSEALSSWWKGCWKMGIPNKIKVFFWRLCLERLPTVDNLSTRGVDVLNVCVHCGWHG 881
            + +            W + I  K+K F WR   + L T + L+TRG+ +   C  C    
Sbjct: 148  AINPPHGSIDLKTRIWNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHREN 207

Query: 882  ESCMHLFWQCKFFRELLMGSEWEVLLQNVQAN----SMLNLLRDVKDRVDWAKFEELVVV 941
            ES  H  + C F       S+  ++   + +N    ++ N+L  V+D    + F +L+ V
Sbjct: 208  ESINHALFTCPFATMAWRLSDSSLIRNQLMSNDFEENISNILNFVQD-TTMSDFHKLLPV 267

Query: 942  --LWAVWCCRNQ---QKFRGRAPSAGLVDWAV---NYLAVFRGASRTYGEGVGGVPRSAV 1001
              +W +W  RN     KFR  +PS  ++       ++L   +   +T       +  + +
Sbjct: 268  WLIWRIWKARNNVVFNKFR-ESPSKTVLSAKAETHDWLNATQSHKKT-PSPTRQIAENKI 327

Query: 1002 KWSPPEEGWYKANVDAAYCGDLSRAGAGVVVRDEVGRVMLSAAVSHDHVGSSDLAEGLAV 1061
            +W  P   + K N DA +      A  G ++R+  G  +   ++   H  +   AE  A+
Sbjct: 328  EWRNPPATYVKCNFDAGFDVQKLEATGGWIIRNHYGTPISWGSMKLAHTSNPLEAETKAL 387

Query: 1062 VDGMRLVVEMDFAQVILETDSMRVFSLL-----HDSAMEDLSEFGVLVSEARREVSAHMQ 1121
            +  ++      + QV +E D   + +L+     H S    L +     ++          
Sbjct: 388  LAALQQTWIRGYTQVFMEGDCQTLINLINGISFHSSLANHLEDISFWANK-------FAS 447

Query: 1122 FRFSFTRREGNRVAHELARFALREGGCEY 1134
             +F F RR+GN++AH LA++     GC Y
Sbjct: 448  IQFGFIRRKGNKLAHVLAKY-----GCTY 461

[Close]

BLAST of Lcy12g010230 vs. TAIR 10
Match: AT2G34320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 60.8 bits (146), Expect = 8.1e-09
Identity = 70/277 (25.27%), Postives = 120/277 (43.32%), Query Frame = 0


Query: 874  CVHCGWHGESCMHLFWQCKFFRELLMGS--------EWEVLLQNVQANS--MLNL----- 933
            CV C    E+  HL ++C F R +   S        EW     ++ AN   +LNL     
Sbjct: 12   CVRCPDSRETVNHLLFKCCFARLVWAISPIPAYPEGEW---TDSLYANLYWVLNLEVEIP 71

Query: 934  -LRDVKDRVDWAKFEELVVVLWAVWCCRNQQKFRGRAPSA-GLVDWAVNYLAVFRGASRT 993
             L  + + V W        +LW +W  RN+  F+G+   A  ++  A+     +      
Sbjct: 72   KLGKIGNLVPW--------LLWRLWKSRNELMFKGKEYDAPEVLRRAMEDFEEWSTRREL 131

Query: 994  YGEGVG-GVPRS-AVKWSPPEEGWYKANVDAAYCGDLSRAGAGVVVRDEVGRVMLSAAVS 1053
             G+  G  V R+ +V+W  P   W K N DA +  +  R G G ++R+E G V+   A +
Sbjct: 132  EGKASGPQVERNLSVQWKAPPYQWVKCNTDATWQLENPRCGIGWILRNESGGVLWMGARA 191

Query: 1054 HDHVGSSDLAEGLAVVDGMRLVVEMDFAQVILETDSMRVFSLLHDS--------AMEDLS 1113
                 +   AE  A+   +  +   ++ ++I E+D+  + +LL+          A+ED+ 
Sbjct: 192  LPRTKNVLEAELEALRWAVLTMSRFNYKRIIFESDAQALVNLLNSDDFWPTLQPALEDIQ 251

Query: 1114 EFGVLVSEARREVSAHMQFRFSFTRREGNRVAHELAR 1124
            +           +    + +F FT R GN+VA  +AR
Sbjct: 252  QL----------LHHFEEVKFEFTPRGGNKVADRIAR 267

[Close]

BLAST of Lcy12g010230 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 53.1 bits (126), Expect = 1.7e-06
Identity = 34/143 (23.78%), Postives = 58/143 (40.56%), Query Frame = 0


Query: 122 VLGTGPWAIDRSLIVLKEPKDVASVLETEFKDCPFWVQIHDVPMKWQTRGWAQHLGGKIG 181
           +L  GPW+ +  + V++    + S  + EFK  PFW+QI  +P+++ T      +G ++G
Sbjct: 75  ILRRGPWSFNDWMCVIQRWTKLHS--DAEFKRIPFWIQIRGIPLRFLTARIITSIGERMG 134

Query: 182 VVEEVGGSNENDWIGPILRFRVRLRLDRPLRRGFHMQDDDGKDSWCPVLYERLPDFCFGC 241
           +  E     +      +L+F+                            YE+L +FC  C
Sbjct: 135 LFLETNLGRDVS----VLKFQ----------------------------YEKLKNFCTTC 183

Query: 242 GCLGHSRRECEGVGASSSGVGED 265
           G L H   EC   G       +D
Sbjct: 195 GMLSHDASECPTSGNQGPHADDD 183

[Close]

BLAST of Lcy12g010230 vs. TAIR 10
Match: AT1G40390.1 (DNAse I-like superfamily protein )

HSP 1 Score: 52.8 bits (125), Expect = 2.2e-06
Identity = 28/84 (33.33%), Postives = 41/84 (48.81%), Query Frame = 0


Query: 406 TPWLVGGDFNAILS---HQEKDGGRAKAEAELAGFQGAIDDCELIDLDFRGPVFTWCNGR 465
           +PWLV GDFN I S   H          +  L   Q  + D +L+DL  RG ++TW N +
Sbjct: 120 SPWLVVGDFNQIASVTEHYSLMPSNISLQG-LEDLQACMRDSDLVDLPCRGVLYTWSNHQ 179

Query: 466 LGEETVWERIDRCLSNMAWQEMFP 487
             +  +  ++DR + N  W   FP
Sbjct: 180 -QDNPILRKLDRAIVNGCWLATFP 201

[Close]

BLAST of Lcy12g010230 vs. TAIR 10
Match: AT1G43730.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 49.7 bits (117), Expect = 1.9e-05
Identity = 29/86 (33.72%), Postives = 39/86 (45.35%), Query Frame = 0


Query: 819 HAPSSSSSEALSS-----------WWKGCWKMGIPNKIKVFFWRLCLERLPTVDNLSTRG 878
           HAPS+  S A +S           W+K  W      K     W +   RL T D L + G
Sbjct: 127 HAPSNIFSTAKTSLALHPQNHIVPWYKAVWFKNHVPKHAFICWVVAWNRLHTRDRLRSWG 186

Query: 879 VDVLNVCVHCGWHGESCMHLFWQCKF 894
           + +  VC+ C  H ES  HLF++C F
Sbjct: 187 LSIPAVCLLCNSHDESRAHLFFECPF 212

The following BLAST results are available for this feature:

BLAST of Lcy12g010230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P14381	4.8e-06	26.98	Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV...	[more]
P08548	1.1e-05	25.00	LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1	[more]
O00370	2.4e-05	25.98	LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1	[more]
P11369	1.2e-04	25.98	LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE...	[more]

BLAST of Lcy12g010230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2N9FHJ0	1.1e-87	24.30	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS18179 PE=4 SV=1	[more]
A0A2N9J109	8.2e-86	23.66	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58001 PE=4 SV=1	[more]
A0A2N9I921	4.1e-85	22.14	Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F...	[more]
A0A2N9J7Z2	1.2e-84	25.10	Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F...	[more]
A0A6J1DAR4	3.8e-83	25.24	uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]

BLAST of Lcy12g010230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150918.1	7.9e-83	25.24	uncharacterized protein LOC111018954 [Momordica charantia]	[more]
XP_030946032.1	1.2e-78	26.83	uncharacterized protein LOC115970553 [Quercus lobata]	[more]
XP_022158377.1	3.8e-77	22.43	uncharacterized protein LOC111024874 [Momordica charantia]	[more]
XP_024037590.1	8.5e-77	24.84	uncharacterized protein LOC112097210 [Citrus clementina]	[more]
XP_023908468.1	2.7e-75	25.85	uncharacterized protein LOC112020138 [Quercus suber]	[more]

BLAST of Lcy12g010230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09510.1	4.0e-24	23.91	Ribonuclease H-like superfamily protein	[more]
AT2G34320.1	8.1e-09	25.27	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT3G42140.1	1.7e-06	23.78	zinc ion binding;nucleic acid binding	[more]
AT1G40390.1	2.2e-06	33.33	DNAse I-like superfamily protein	[more]
AT1G43730.1	1.9e-05	33.72	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025836	Zinc knuckle CX2CX4HX4C	PFAM	PF14392	zf-CCHC_4	coord: 209..252 e-value: 4.5E-14 score: 51.9
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10	Endonuclease/exonuclease/phosphatase	coord: 355..493 e-value: 2.6E-12 score: 49.0
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 365..486
IPR026960	Reverse transcriptase zinc-binding domain	PFAM	PF13966	zf-RVT	coord: 823..896 e-value: 1.8E-16 score: 60.6
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 1002..1125 e-value: 1.8E-21 score: 76.2
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 999..1129 e-value: 6.3E-13 score: 50.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 284..326
None	No IPR available	PANTHER	PTHR46736	FAMILY NOT NAMED	coord: 688..1080
None	No IPR available	PANTHER	PTHR46736:SF6	SUBFAMILY NOT NAMED	coord: 688..1080
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 238..251 score: 8.795613
IPR044730	Ribonuclease H-like domain, plant type	CDD	cd06222	RNase_H_like	coord: 1002..1123 e-value: 1.09151E-20 score: 86.9844
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 997..1127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy12g010230.1	Lcy12g010230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity
molecular_function	GO:0008270	zinc ion binding