Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCTCGATTAGATCTTACTCAAGTAATCATATAGATTGTGACATTCAGTGGAAGAATTTCAAATGGAGGTTTTCTGGTCTATATGGGTTTCCAGAAGCAGGACAGAAAGCTCAGACCTGGGAGCTTATTCGCAAATTGAAGCTTTCTGGTAACTCACCTTGGTTACTTGGTGAAGATATGAACGAAATACTAAGAGATGAAGAGAAACTGGGTGGCCAACCAAGAGATAGAAAATTAATGGAAGACTTTCGACAATGTATTGATGACTGTGAGTTAAAAGACTTGAGACCTAGTGGAGAATTGTTCACTTGGTATGGTAATAGGAAAGGTCATTTTATAAAGGAAAGACTGGATCGTTATCTTTGCAATCACTTGTTTGAAAATTTATTTTCTGCCATAGAAACAACAAACCTCGATTGGTTTTTCTCTGACCATAAACCAATTGAGGCTCGGGTAGAACTAAAAGGAAGAAAATCTATAAACAGGAAGAGAAATCAATTCAGGTTTGAGGAGCTATGGACTAGATATGAGGAATGTTCTGATCTAATCAAAGAAAATGGCGTCTGGAAAGGTAATTCTGCTTACTCATCCTCTTTAAGTAATAATTTATACAATTGTTCAAAAGTTTTATCACACTGGGGAAAAAACATTAATAGTTTTAGAAGAGGCAGAATAGAGGAATGCAAAAGATTACTAAAAGAAGCCTTTGATAATCATCATACCTCAGATTTAGGTAATATCCATAATATAGAATTTGAATTGAACAATCTATTAGAAGAGGATGAGATTTATTGGCTCCAAAGATCTAGAGAGGAGTGGTTAAAGTGGGGGGATAAAAACACCAAATGGTTCCACAAAAAAGCCTCAATGCGAAGGAAAACAAATGAAATTCTGGGTATTAATGACATAAATGGTAATTGGACAGATGACCCAGTAAAAATTGAGGATATTTTCACTTCTTACTTTGAGAACCTTTTTAATTCTTCGCATCCTAGGCCAACTTATATAAATGAAGTCCTAGACGGTCTAACTCCCAAAGTGAATCAGCATATGAACAGTAGGTTAATGGCCCCTTTTACTAGACAAGAAATAGAAAAAGCCATTAAGGAAATGTTCCCCACTAAAGCCCCGGGCCCCGATGGTTTCTCGGCTATTTTTTATCAGAAGTATTGGTCCATGTTGGGAATAAAACAGTAGAGGAATGCCTTAGAATTCTAAATGGCCATAATAGTCTAGATTGTTGGAATGATACTACTATTGTTTTGATCCCTAAGAAGCCTAACCCTAGTGATGTCAATGATTATAGGCCTATTAGTTTATGTAATGTAAATTATAAAATCATTACAAAAACAATTGCAAATAGACTGAAACCCATCTTAAAAGATATCATTTCGGACTCCCAATCGGCTTTTATCCAAGGTAGGTTAATAACTAACAATATCATTATTGGTCTAGAATGCATACACAGTATCAAAACAAATAGGCCTCCTATAAAAAATATGGCAGCTCTTAAAATTCATCTAAGTAAAGCATATGATAGGGTGGAGTGGCTCTTTTTAGAAAACATTATGTTAAAACTAGGGTTCCACCAAAGTTGGGTCAATTTGATTCTAAAATGTATCACCTCTCCAAGCTTTTCAATACAAATAAATGGGGAAAAAAAGGGCAACTTTAGATCTTATAGAGGTTTAAGACAGGGGGATCCCCTATCCCCCTATCTCTTTCTTTTGGTAGCAGAAGACCTTTCACATTTGATTTCTAAAGCAACTAATGAAGGTAGGTTATCAGGTCTCTCTTTTCCTTATGGTCCCTCCATTTCACATTTACTGTTTGCTGATGACAGTTTAATTCTTTGCAAGGCTGATGAAAAGGAATTAATGGTAGTTAAGGATTTGCTAAATAAATTTGAACTCACTTCAGGGGAATCAATAAATTTTTCCAAATCCTCCATTCTGTTCTCCCCAAAAATTAAAAAGGATAGGAAGAATTTCTTAAGTTCCATCCTCGGGGTAAACAATGTGGATGATTTTGGGAAGTATCTAGGAGTCCCATCCCTTTTCTCTAGGAGAAAATCTAAAGACCTTAGCTATATATTGGATAGAGTTTGGAAGTCGGTTCAAGGGTGGAAGGGCTCCTTTTTCTCTATAGCCGGAAAAGAAATTCTAATCAAAAGTATAGGCCAAGTTATCCCATCCTACGCTATGAGTGTCTTTAGGTTCCCTAAGAAAGTGTGTGAGGAGATAACTAGAAGTTTCGCTAGGTTTTGGTGGGGCTCTAGTCAAATTAAAAAGAAAATCCATTGGTTTAAATGGGAATCTTTGTGTCTCCCCAAAAGCCTTGGAGGGTTAAACTTTAGGGACACTGAAGGATTCAACCAAGCCCCATTAGCAAAGCAAGTATGGAGATTGATTTCTAAACCAGAATCTCTAGTGGCTAGGTTTATTAAAAGTATCTATTATCAAAACTCAAGTCTCTGGGAAGCAGAAACAGGCAAATCCTCTTCTTTTGTTTGGAAAAGCCTTATTTGGGGAAGAAGTCTACTTCAAAAAGGAATTAGGAAAAGAATAGGTAATGGTAAGAATATTTTCATGTTTAAAGACCCATGGCTACCTAAAGAATCCACCTTCAAACCCATAGGTATTGATCTAATTTATTCAGACAGCAAAGTCGCTGACTTTATAACACCTTCAGGAGGGTGGGATATCGATTTAATTCATAAGGCAGTAATAAATTTTGATTGTGATTCCATCAAGGCGGTTCCTATTAATAATAATCTAGAAGACAAACTTATATGGCACTATGATAGGACGGGTGAATACACAGTAAAAAGCGGATACAAACTTTTTATGAAACTTAGAATTGATGGAATTTCCTCTAGTTACAGCCCTATGCATAAAGTTTGGAGCAATCTATGGAAGTTAAAAATTCCTACAAAAATTAAGCATTTTCTGTGGAAAGCTCTTAATAATTCCTTACCAAATAATTTTAACCTAGCCCATCGAGGTGTTCCAATCTCTCCTCTATGCCCTATGTGTAATTCACAAATTGAATCTTCTGATCATTGTCTATTTCTTTGTCCTAGAGATAAAAGTATCTGGAATCTAATGCATAACCGTGTTTTTTTGGAGGAAAATTTCGCTGGGAGCTTTATTGATAGGTGGATTAAGATCGATGCTACAAGCTCATCAGAAAATTTGGGGAAAGCAGTCGTTATCTGTTGGGCGCTATGGTCAGACAGAAACAAAATATCGCACGGGGAGAATATTTCACCTATCTCTATTCGAAGAAAGTGGATCGAGGATTACCTGGATTCGTTTCGGCATGCAAATGTTAATCGTCACACGATCAGAGTTCCCGCTAATGCTTCTTCTTCCTCGACTAGAATTTTAACCAATCGCCTCCATCCTCAAGACCGAAATGGTGATGCATGTTGGATTCCCCCTTCCGATGGATTCTGGAAGCTAAATACAGATGCAGCGTGTTCCGATTCTCCTCCAATGATCTGTAGAGACAAAATCGGTGAAGTGAAGGTGGCAGCATCTATTTTTCTGGATTACCGGTTGGATTCGATAATGGGAGAGTTGAGAGGAATTTTGGAAGGGATGAGGATGGCTCTGAGTAGGGGCTGTGAGAAAATCGAAGTGGAGTCTGATAGTCAACAAGCCATTAATTTCATCCAGCGAAAATCTATCATTTGGAGTGACGTGGAAGCTTTAGTGACATCCATCTGGGAGCTAGCGCAATTATTTTCTGAGATTTCGTTCAAATTCATTCCAAGGATGCAAAATGGAGAAGCAGATTCGTTAGCTAAATTCGCGAAATTCACAAAATGTAGTGAGACTTGGGATTCTGTATTCCCAAGTTGGCTGAGTATTGGGCCTGATGGGCCCTTTTCTTTGCCCTTGTGGTGTTAA
mRNA sequence
ATGCTCTCGATTAGATCTTACTCAAGTAATCATATAGATTGTGACATTCAGTGGAAGAATTTCAAATGGAGGTTTTCTGGTCTATATGGGTTTCCAGAAGCAGGACAGAAAGCTCAGACCTGGGAGCTTATTCGCAAATTGAAGCTTTCTGGTAACTCACCTTGGTTACTTGGTGAAGATATGAACGAAATACTAAGAGATGAAGAGAAACTGGGTGGCCAACCAAGAGATAGAAAATTAATGGAAGACTTTCGACAATGTATTGATGACTGTGAGTTAAAAGACTTGAGACCTAGTGGAGAATTGTTCACTTGGTATGGTAATAGGAAAGGTCATTTTATAAAGGAAAGACTGGATCGTTATCTTTGCAATCACTTGTTTGAAAATTTATTTTCTGCCATAGAAACAACAAACCTCGATTGGTTTTTCTCTGACCATAAACCAATTGAGGCTCGGGTAGAACTAAAAGGAAGAAAATCTATAAACAGGAAGAGAAATCAATTCAGGTTTGAGGAGCTATGGACTAGATATGAGGAATGTTCTGATCTAATCAAAGAAAATGGCGTCTGGAAAGATAAAAGTATCTGGAATCTAATGCATAACCGTGTTTTTTTGGAGGAAAATTTCGCTGGGAGCTTTATTGATAGGTGGATTAAGATCGATGCTACAAGCTCATCAGAAAATTTGGGGAAAGCAGTCGTTATCTGTTGGGCGCTATGGTCAGACAGAAACAAAATATCGCACGGGGAGAATATTTCACCTATCTCTATTCGAAGAAAGTGGATCGAGGATTACCTGGATTCGTTTCGGCATGCAAATGTTAATCGTCACACGATCAGAGTTCCCGCTAATGCTTCTTCTTCCTCGACTAGAATTTTAACCAATCGCCTCCATCCTCAAGACCGAAATGGTGATGCATGTTGGATTCCCCCTTCCGATGGATTCTGGAAGCTAAATACAGATGCAGCGTGTTCCGATTCTCCTCCAATGATCTGTAGAGACAAAATCGGTGAAGTGAAGGTGGCAGCATCTATTTTTCTGGATTACCGGTTGGATTCGATAATGGGAGAGTTGAGAGGAATTTTGGAAGGGATGAGGATGGCTCTGAGTAGGGGCTGTGAGAAAATCGAAGTGGAGTCTGATAGTCAACAAGCCATTAATTTCATCCAGCGAAAATCTATCATTTGGAGTGACGTGGAAGCTTTAGTGACATCCATCTGGGAGCTAGCGCAATTATTTTCTGAGATTTCGTTCAAATTCATTCCAAGGATGCAAAATGGAGAAGCAGATTCGTTAGCTAAATTCGCGAAATTCACAAAATGTAGTGAGACTTGGGATTCTGTATTCCCAAGTTGGCTGAGTATTGGGCCTGATGGGCCCTTTTCTTTGCCCTTGTGGTGTTAA
Coding sequence (CDS)
ATGCTCTCGATTAGATCTTACTCAAGTAATCATATAGATTGTGACATTCAGTGGAAGAATTTCAAATGGAGGTTTTCTGGTCTATATGGGTTTCCAGAAGCAGGACAGAAAGCTCAGACCTGGGAGCTTATTCGCAAATTGAAGCTTTCTGGTAACTCACCTTGGTTACTTGGTGAAGATATGAACGAAATACTAAGAGATGAAGAGAAACTGGGTGGCCAACCAAGAGATAGAAAATTAATGGAAGACTTTCGACAATGTATTGATGACTGTGAGTTAAAAGACTTGAGACCTAGTGGAGAATTGTTCACTTGGTATGGTAATAGGAAAGGTCATTTTATAAAGGAAAGACTGGATCGTTATCTTTGCAATCACTTGTTTGAAAATTTATTTTCTGCCATAGAAACAACAAACCTCGATTGGTTTTTCTCTGACCATAAACCAATTGAGGCTCGGGTAGAACTAAAAGGAAGAAAATCTATAAACAGGAAGAGAAATCAATTCAGGTTTGAGGAGCTATGGACTAGATATGAGGAATGTTCTGATCTAATCAAAGAAAATGGCGTCTGGAAAGATAAAAGTATCTGGAATCTAATGCATAACCGTGTTTTTTTGGAGGAAAATTTCGCTGGGAGCTTTATTGATAGGTGGATTAAGATCGATGCTACAAGCTCATCAGAAAATTTGGGGAAAGCAGTCGTTATCTGTTGGGCGCTATGGTCAGACAGAAACAAAATATCGCACGGGGAGAATATTTCACCTATCTCTATTCGAAGAAAGTGGATCGAGGATTACCTGGATTCGTTTCGGCATGCAAATGTTAATCGTCACACGATCAGAGTTCCCGCTAATGCTTCTTCTTCCTCGACTAGAATTTTAACCAATCGCCTCCATCCTCAAGACCGAAATGGTGATGCATGTTGGATTCCCCCTTCCGATGGATTCTGGAAGCTAAATACAGATGCAGCGTGTTCCGATTCTCCTCCAATGATCTGTAGAGACAAAATCGGTGAAGTGAAGGTGGCAGCATCTATTTTTCTGGATTACCGGTTGGATTCGATAATGGGAGAGTTGAGAGGAATTTTGGAAGGGATGAGGATGGCTCTGAGTAGGGGCTGTGAGAAAATCGAAGTGGAGTCTGATAGTCAACAAGCCATTAATTTCATCCAGCGAAAATCTATCATTTGGAGTGACGTGGAAGCTTTAGTGACATCCATCTGGGAGCTAGCGCAATTATTTTCTGAGATTTCGTTCAAATTCATTCCAAGGATGCAAAATGGAGAAGCAGATTCGTTAGCTAAATTCGCGAAATTCACAAAATGTAGTGAGACTTGGGATTCTGTATTCCCAAGTTGGCTGAGTATTGGGCCTGATGGGCCCTTTTCTTTGCCCTTGTGGTGTTAA
Protein sequence
MLSIRSYSSNHIDCDIQWKNFKWRFSGLYGFPEAGQKAQTWELIRKLKLSGNSPWLLGEDMNEILRDEEKLGGQPRDRKLMEDFRQCIDDCELKDLRPSGELFTWYGNRKGHFIKERLDRYLCNHLFENLFSAIETTNLDWFFSDHKPIEARVELKGRKSINRKRNQFRFEELWTRYEECSDLIKENGVWKDKSIWNLMHNRVFLEENFAGSFIDRWIKIDATSSSENLGKAVVICWALWSDRNKISHGENISPISIRRKWIEDYLDSFRHANVNRHTIRVPANASSSSTRILTNRLHPQDRNGDACWIPPSDGFWKLNTDAACSDSPPMICRDKIGEVKVAASIFLDYRLDSIMGELRGILEGMRMALSRGCEKIEVESDSQQAINFIQRKSIIWSDVEALVTSIWELAQLFSEISFKFIPRMQNGEADSLAKFAKFTKCSETWDSVFPSWLSIGPDGPFSLPLWC
Homology
BLAST of Lcy12g010100 vs. ExPASy TrEMBL
Match:
A0A2P6SDG4 (Putative RNA-directed DNA polymerase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0340391 PE=4 SV=1)
HSP 1 Score: 170.6 bits (431), Expect = 1.5e-38
Identity = 86/220 (39.09%), Postives = 133/220 (60.45%), Query Frame = 0
Query: 2 LSIRSYSSNHIDCDIQWKNFK--WRFSGLYGFPEAGQKAQTWELIRKLKLSGNSPWLLGE 61
+S++SYS+NHID I + WRF+G+YGFP+AG++++TW L+++L + GN PW++G
Sbjct: 88 VSLQSYSNNHIDVVIGEEGDPRCWRFTGVYGFPKAGERSRTWNLLKQLSMHGNLPWVVGG 147
Query: 62 DMNEILRDEEKLGGQPRDRKLMEDFRQCIDDCELKDLRPSGELFTWYGNRKGHFIKERLD 121
D NEI +K+GG R +LM D ++ + CEL D++ G FTW G R G ++ RLD
Sbjct: 148 DYNEICERSDKMGGVLRSVRLMNDMKEALVFCELDDIQFVGPRFTWRGIRGGEEVRVRLD 207
Query: 122 RYLCNHLFENLFSAIETTNLDWFFSDHKPIEARVELKGRKSINRKRNQFRFEELWTRYEE 181
R+ C+ + +LF A +LD SDH PI V ++ ++ RK+ +F+FEE W E
Sbjct: 208 RFTCSLPWRDLFPASRVRHLDPSTSDHVPILLEVRIQKKRRKKRKKKRFKFEECWLLDET 267
Query: 182 CSDLIKE-----NGVWKDKSIWNLMHN-RVFLEENFAGSF 214
C +++K +GV + +WN M + R LE SF
Sbjct: 268 CKEVVKSSWESVSGVGPTQLLWNRMQSTRAALESWSEKSF 307
BLAST of Lcy12g010100 vs. ExPASy TrEMBL
Match:
A0A5C7IIT4 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_004125 PE=4 SV=1)
HSP 1 Score: 164.9 bits (416), Expect = 8.3e-37
Identity = 121/454 (26.65%), Postives = 197/454 (43.39%), Query Frame = 0
Query: 2 LSIRSYSSNHIDCDIQWKNFK-WRFSGLYGFPEAGQKAQTWELIRKLKLSGNSPWLLGED 61
+++ SYS HID + +N K WR +G YG P Q+ W L+R+L PW +G D
Sbjct: 436 VALLSYSRFHIDTVVTLRNDKVWRLTGFYGHPNLTQRIHGWNLLRRLAGMSPLPWFVGGD 495
Query: 62 MNEILRDEEKLGGQPRDRKLMEDFRQCIDDCELKDLRPSGELFTWYGNRKG-HFIKERLD 121
NEI+ EK+GG R M +F++ ++DC L+DL G FTW R H I+ERLD
Sbjct: 496 FNEIVGLSEKVGGNTRHECFMGNFQEALEDCGLRDLGFLGPRFTWSNRRDSEHAIQERLD 555
Query: 122 RYLCNHLFENLFSAIETTNLDWFFSDHKPIEARVELKGRKSINRKRNQFRFEELWTRYEE 181
R + N + +LFS +LD++ SDH+PI +E+ +K R++F ++ W ++
Sbjct: 556 RCVGNTGWLDLFSCFSIKHLDFWKSDHRPI--LLEISDKKEEAGGRHRFYYDRCWAERDD 615
Query: 182 CSDLIKENGVWKDKSIWNLMHNRVFLEENFAG-SFIDRWIKIDATSSSENLGKAVVICWA 241
F+ +F+ FID + V+ W
Sbjct: 616 ------------------------FVRLDFSQLPFIDFVLFCKGKLDIMYFEFLCVVWWR 675
Query: 242 LWSDRNKISHGENISPIS--IRRKWIEDYLDSFRHANVNRHTIRVPANASSSSTRILTNR 301
+W RN++ + ++ + W ++ F+ A + + ++ R
Sbjct: 676 VWYRRNQLVYEKSSQTVHDFDVLDWAASFIQDFKAAK------------TVDTGSVVKQR 735
Query: 302 LHPQDRNGDACWIPPSDGFWKLNTDA-----ACSDSPPMICRDKIGEVKVAASIFLDYRL 361
+ P+ W P G +K+NTDA A ++ RD G V + L
Sbjct: 736 VAPK-------WKPSPSGSYKINTDATLDCRAKVTGIGVVIRDCYGHVMASLCQSFPGLL 795
Query: 362 DSIMGELRGILEGMRMALSRGCEKIEVESDSQQAINFIQRKSIIWSDVEALVTSIWELAQ 421
E +L G R+AL G +ESDS +N I I+ +++ ++ I +
Sbjct: 796 QPQTVEAVAVLRGFRLALEAGLCPASIESDSLSVVNLINSMDILRAEIGVVLHDILAMGS 844
Query: 422 LFSEISFKFIPRMQNGEADSLAKFAKFTKCSETW 446
S F+PR+ N A SLAK + + W
Sbjct: 856 NSFFSSVSFVPRLTNCVAHSLAKLSLSFEGEHVW 844
BLAST of Lcy12g010100 vs. ExPASy TrEMBL
Match:
A0A5C7I4W9 (RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_010516 PE=4 SV=1)
HSP 1 Score: 164.1 bits (414), Expect = 1.4e-36
Identity = 129/425 (30.35%), Postives = 194/425 (45.65%), Query Frame = 0
Query: 4 IRSYSSNHIDCDIQWKN-FKWRFSGLYGFPEAGQKAQTWELIRKLKLSGNSPWLLGEDMN 63
+ SYS+ HID I N +WRFSG+YG P + TW L+R+LK N PW+ G D N
Sbjct: 93 VLSYSAGHIDARIHEDNGLQWRFSGIYGDPNPSNRMNTWTLMRRLKEVDNLPWVCGGDFN 152
Query: 64 EILRDEEKLGGQPRDRKLMEDFRQCIDDCELKDLRPSGELFTWYGNRKGH-FIKERLDRY 123
E+L EKLGG + + + FRQ +DDCE DL SG FTW R+G ++ERLDR
Sbjct: 153 ELLSMSEKLGGSEKAIRDIIRFRQVVDDCEFIDLGFSGPKFTWNNMREGRDNVQERLDRI 212
Query: 124 LCNHLFENLFSAIETTNLDWFFSDHKPI-----EARVELKGRKSINRKRNQFRFEELWTR 183
L + + N++ I +L + SDH+P+ L R + +K+N F
Sbjct: 213 LASTNWRNMYQQITIEHLGFNTSDHRPLLMDWDRNTAYLHNRALVRKKKNYIPF------ 272
Query: 184 YEECSDLIKENGVWKDKSIWNLMHNRVFLEENFAGSFIDRWIKIDATSSSENLGKAVVIC 243
L+ G+ +D + M N F + ID + +T S + L +I
Sbjct: 273 ------LLDTRGIKQDSN--EGMANVFFFYDLTYNYVIDILLLFFSTHSLDELNLFCMIM 332
Query: 244 WALWSDRNKIS-HGENISPISIRRKWIEDYLDSFRHANVNRHTIRVPANASSSSTRILTN 303
WA+W RN +S +G+ + P+ + K E LD F+ +S S IL
Sbjct: 333 WAIWEHRNLVSINGKGLLPVQVVSK-AEVLLDEFQ---------------TSISAVILVA 392
Query: 304 RLHPQDRN-GDACWIPPSDGFWKLNTDAACSDS------PPMICRDKIGEVKVAASIFLD 363
R P+ GD W+ P G KLN+ ++S +IC DK + A FL
Sbjct: 393 RPSPRPLPCGD--WLAPPPGRLKLNSAVVTNNSYRNTALGSVICDDKGKIIAARARKFLG 452
Query: 364 YRLDSIMGELRGILEGMRMALSRG-------CEKIEVESDSQQAINFIQRKSIIWSDVEA 407
L ++EG+ +A G + + V S + F+ S + D++A
Sbjct: 453 V-FSKETSVLLALMEGLMLAKFLGLVVWIAEVDLLPVVSILNSSGTFLGDASFVVKDIKA 484
BLAST of Lcy12g010100 vs. ExPASy TrEMBL
Match:
A0A7J6GGL8 (CCHC-type domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_006630 PE=4 SV=1)
HSP 1 Score: 159.1 bits (401), Expect = 4.6e-35
Identity = 90/303 (29.70%), Postives = 151/303 (49.83%), Query Frame = 0
Query: 2 LSIRSYSSNHIDCDIQWKNFK-WRFSGLYGFPEAGQKAQTWELIRKLKLSGNSPWLLGED 61
+S++S++S HID ++ + WRF+G YG P+A ++++W L+ +LK + PW+ G D
Sbjct: 520 VSVKSFTSGHIDALVKCPGRELWRFTGFYGNPKASCRSESWRLLCRLKDLFDLPWICGGD 579
Query: 62 MNEILRDEEKLGGQPRDRKLMEDFRQCIDDCELKDLRPSGELFTWYGNRK-GHFIKERLD 121
NEIL EK GG R M +F+ +D C L DL G+ FTW R+ G ++ERLD
Sbjct: 580 FNEILSINEKKGGSDRSMSAMTEFQNALDRCSLADLGFEGQCFTWLNKRQGGAHVQERLD 639
Query: 122 RYLCNHLFENLFSAIETTNLDWFFSDHKPIEARVELKGRKSINRKRNQFRFEELWTRYEE 181
RY CN + +LF ++ N D+ SDH+PI A +E R+ K+ FRFE W + E
Sbjct: 640 RYFCNQRWHDLFPFVKVLNGDFLNSDHRPIVATLENVSRRQRYDKKRCFRFETHWLKDPE 699
Query: 182 CSDLIKEN-------------------------GVWKDKSIWNLMHNRVFLEENFAGSFI 241
C ++I + G+W +KS + + +V + +
Sbjct: 700 CQEIINRSWLSLDCPLANQDSLIDIFGLCADQLGMW-NKSKYGSLPRQVRETQKQLDDLL 759
Query: 242 D---RWIKIDATSSSENLGKAVVICWALWSDRNKISHGENISPISIRRKWIEDYLDSFRH 275
++++ S + ++ W +W DRN + G+ S ++ ++ + L F+
Sbjct: 760 SVSAPLVRMEEVLSKDEFELVSMVWWWVWYDRNSVLFGKKQSRLNGVVEFAREALVEFQG 819
BLAST of Lcy12g010100 vs. ExPASy TrEMBL
Match:
A0A7J6DZ24 (CCHC-type domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_001025 PE=4 SV=1)
HSP 1 Score: 153.3 bits (386), Expect = 2.5e-33
Identity = 75/198 (37.88%), Postives = 113/198 (57.07%), Query Frame = 0
Query: 2 LSIRSYSSNHIDCDIQWKNFK-WRFSGLYGFPEAGQKAQTWELIRKLKLSGNSPWLLGED 61
+S++S+S HID ++ WRF+G YG P+A + +W+L+ +LK + PW+ G D
Sbjct: 639 VSVKSFSVGHIDALVKCPGLNVWRFTGFYGNPKASSRIDSWQLLCRLKGLFDLPWICGGD 698
Query: 62 MNEILRDEEKLGGQPRDRKLMEDFRQCIDDCELKDLRPSGELFTWYGNRKG-HFIKERLD 121
NEIL EK GG R + DF+Q +D C+L D+ G+ FTW R+G ++ERLD
Sbjct: 699 FNEILSINEKKGGVDRSLSAISDFQQALDKCDLVDMGFEGQCFTWLNKRQGVAHVQERLD 758
Query: 122 RYLCNHLFENLFSAIETTNLDWFFSDHKPIEARVELKGRKSINRKRNQFRFEELWTRYEE 181
RY CN + NLF +++ N D+ SDH+PI A +E K+ FRFE W + E
Sbjct: 759 RYFCNQEWHNLFPSVKVVNGDFIHSDHRPIAAILENVVCNRQYDKKKSFRFETHWLKDAE 818
Query: 182 CSDLIKENGVWKDKSIWN 198
C D++ + + D + N
Sbjct: 819 CRDIVTQTWLSPDVPLDN 836
BLAST of Lcy12g010100 vs. NCBI nr
Match:
PRQ56718.1 (putative RNA-directed DNA polymerase [Rosa chinensis])
HSP 1 Score: 170.6 bits (431), Expect = 3.1e-38
Identity = 86/220 (39.09%), Postives = 133/220 (60.45%), Query Frame = 0
Query: 2 LSIRSYSSNHIDCDIQWKNFK--WRFSGLYGFPEAGQKAQTWELIRKLKLSGNSPWLLGE 61
+S++SYS+NHID I + WRF+G+YGFP+AG++++TW L+++L + GN PW++G
Sbjct: 88 VSLQSYSNNHIDVVIGEEGDPRCWRFTGVYGFPKAGERSRTWNLLKQLSMHGNLPWVVGG 147
Query: 62 DMNEILRDEEKLGGQPRDRKLMEDFRQCIDDCELKDLRPSGELFTWYGNRKGHFIKERLD 121
D NEI +K+GG R +LM D ++ + CEL D++ G FTW G R G ++ RLD
Sbjct: 148 DYNEICERSDKMGGVLRSVRLMNDMKEALVFCELDDIQFVGPRFTWRGIRGGEEVRVRLD 207
Query: 122 RYLCNHLFENLFSAIETTNLDWFFSDHKPIEARVELKGRKSINRKRNQFRFEELWTRYEE 181
R+ C+ + +LF A +LD SDH PI V ++ ++ RK+ +F+FEE W E
Sbjct: 208 RFTCSLPWRDLFPASRVRHLDPSTSDHVPILLEVRIQKKRRKKRKKKRFKFEECWLLDET 267
Query: 182 CSDLIKE-----NGVWKDKSIWNLMHN-RVFLEENFAGSF 214
C +++K +GV + +WN M + R LE SF
Sbjct: 268 CKEVVKSSWESVSGVGPTQLLWNRMQSTRAALESWSEKSF 307
BLAST of Lcy12g010100 vs. NCBI nr
Match:
XP_004310201.2 (PREDICTED: uncharacterized protein LOC101298860 [Fragaria vesca subsp. vesca])
HSP 1 Score: 165.2 bits (417), Expect = 1.3e-36
Identity = 86/190 (45.26%), Postives = 115/190 (60.53%), Query Frame = 0
Query: 2 LSIRSYSSNHIDCDIQWKN-FKWRFSGLYGFPEAGQKAQTWELIRKLKLSGNSPWLLGED 61
LS+ SYS NHI I+ WRF+G+YGF + ++ TW+LIR L G WLLG D
Sbjct: 64 LSVMSYSLNHIYTVIEGVGPCFWRFTGVYGFSKVEERYWTWDLIRSLAQGGTGLWLLGGD 123
Query: 62 MNEILRDEEKLGGQPRDRKLMEDFRQCIDDCELKDLRPSGELFTWYGNRKGHFIKERLDR 121
NEILR EK GG PRD + ME F++C+DDC L DL SG +FTW G R G +K RLDR
Sbjct: 124 FNEILRSSEKEGGPPRDFEQMEAFQKCLDDCGLIDLNFSGPVFTWKGKRAGELVKTRLDR 183
Query: 122 YLCNHLFENLFSAIETTNLDWFFSDHKPIEARVELKGRKSINR-KRNQFRFEELWTRYEE 181
++ N ++ +FSA T++ SDH P+ +E+ + I R KR +F EE W R E
Sbjct: 184 FVANKEWKEVFSASRVTHMKPSRSDHVPL--GIEILTTRVIRRVKRKRFHIEEFWLRDAE 243
Query: 182 CSDLIKENGV 190
C D+++ V
Sbjct: 244 CIDVVRNGRV 251
BLAST of Lcy12g010100 vs. NCBI nr
Match:
TXG69190.1 (hypothetical protein EZV62_004125 [Acer yangbiense])
HSP 1 Score: 164.9 bits (416), Expect = 1.7e-36
Identity = 121/454 (26.65%), Postives = 197/454 (43.39%), Query Frame = 0
Query: 2 LSIRSYSSNHIDCDIQWKNFK-WRFSGLYGFPEAGQKAQTWELIRKLKLSGNSPWLLGED 61
+++ SYS HID + +N K WR +G YG P Q+ W L+R+L PW +G D
Sbjct: 436 VALLSYSRFHIDTVVTLRNDKVWRLTGFYGHPNLTQRIHGWNLLRRLAGMSPLPWFVGGD 495
Query: 62 MNEILRDEEKLGGQPRDRKLMEDFRQCIDDCELKDLRPSGELFTWYGNRKG-HFIKERLD 121
NEI+ EK+GG R M +F++ ++DC L+DL G FTW R H I+ERLD
Sbjct: 496 FNEIVGLSEKVGGNTRHECFMGNFQEALEDCGLRDLGFLGPRFTWSNRRDSEHAIQERLD 555
Query: 122 RYLCNHLFENLFSAIETTNLDWFFSDHKPIEARVELKGRKSINRKRNQFRFEELWTRYEE 181
R + N + +LFS +LD++ SDH+PI +E+ +K R++F ++ W ++
Sbjct: 556 RCVGNTGWLDLFSCFSIKHLDFWKSDHRPI--LLEISDKKEEAGGRHRFYYDRCWAERDD 615
Query: 182 CSDLIKENGVWKDKSIWNLMHNRVFLEENFAG-SFIDRWIKIDATSSSENLGKAVVICWA 241
F+ +F+ FID + V+ W
Sbjct: 616 ------------------------FVRLDFSQLPFIDFVLFCKGKLDIMYFEFLCVVWWR 675
Query: 242 LWSDRNKISHGENISPIS--IRRKWIEDYLDSFRHANVNRHTIRVPANASSSSTRILTNR 301
+W RN++ + ++ + W ++ F+ A + + ++ R
Sbjct: 676 VWYRRNQLVYEKSSQTVHDFDVLDWAASFIQDFKAAK------------TVDTGSVVKQR 735
Query: 302 LHPQDRNGDACWIPPSDGFWKLNTDA-----ACSDSPPMICRDKIGEVKVAASIFLDYRL 361
+ P+ W P G +K+NTDA A ++ RD G V + L
Sbjct: 736 VAPK-------WKPSPSGSYKINTDATLDCRAKVTGIGVVIRDCYGHVMASLCQSFPGLL 795
Query: 362 DSIMGELRGILEGMRMALSRGCEKIEVESDSQQAINFIQRKSIIWSDVEALVTSIWELAQ 421
E +L G R+AL G +ESDS +N I I+ +++ ++ I +
Sbjct: 796 QPQTVEAVAVLRGFRLALEAGLCPASIESDSLSVVNLINSMDILRAEIGVVLHDILAMGS 844
Query: 422 LFSEISFKFIPRMQNGEADSLAKFAKFTKCSETW 446
S F+PR+ N A SLAK + + W
Sbjct: 856 NSFFSSVSFVPRLTNCVAHSLAKLSLSFEGEHVW 844
BLAST of Lcy12g010100 vs. NCBI nr
Match:
TXG63522.1 (hypothetical protein EZV62_010516 [Acer yangbiense])
HSP 1 Score: 164.1 bits (414), Expect = 2.9e-36
Identity = 129/425 (30.35%), Postives = 194/425 (45.65%), Query Frame = 0
Query: 4 IRSYSSNHIDCDIQWKN-FKWRFSGLYGFPEAGQKAQTWELIRKLKLSGNSPWLLGEDMN 63
+ SYS+ HID I N +WRFSG+YG P + TW L+R+LK N PW+ G D N
Sbjct: 93 VLSYSAGHIDARIHEDNGLQWRFSGIYGDPNPSNRMNTWTLMRRLKEVDNLPWVCGGDFN 152
Query: 64 EILRDEEKLGGQPRDRKLMEDFRQCIDDCELKDLRPSGELFTWYGNRKGH-FIKERLDRY 123
E+L EKLGG + + + FRQ +DDCE DL SG FTW R+G ++ERLDR
Sbjct: 153 ELLSMSEKLGGSEKAIRDIIRFRQVVDDCEFIDLGFSGPKFTWNNMREGRDNVQERLDRI 212
Query: 124 LCNHLFENLFSAIETTNLDWFFSDHKPI-----EARVELKGRKSINRKRNQFRFEELWTR 183
L + + N++ I +L + SDH+P+ L R + +K+N F
Sbjct: 213 LASTNWRNMYQQITIEHLGFNTSDHRPLLMDWDRNTAYLHNRALVRKKKNYIPF------ 272
Query: 184 YEECSDLIKENGVWKDKSIWNLMHNRVFLEENFAGSFIDRWIKIDATSSSENLGKAVVIC 243
L+ G+ +D + M N F + ID + +T S + L +I
Sbjct: 273 ------LLDTRGIKQDSN--EGMANVFFFYDLTYNYVIDILLLFFSTHSLDELNLFCMIM 332
Query: 244 WALWSDRNKIS-HGENISPISIRRKWIEDYLDSFRHANVNRHTIRVPANASSSSTRILTN 303
WA+W RN +S +G+ + P+ + K E LD F+ +S S IL
Sbjct: 333 WAIWEHRNLVSINGKGLLPVQVVSK-AEVLLDEFQ---------------TSISAVILVA 392
Query: 304 RLHPQDRN-GDACWIPPSDGFWKLNTDAACSDS------PPMICRDKIGEVKVAASIFLD 363
R P+ GD W+ P G KLN+ ++S +IC DK + A FL
Sbjct: 393 RPSPRPLPCGD--WLAPPPGRLKLNSAVVTNNSYRNTALGSVICDDKGKIIAARARKFLG 452
Query: 364 YRLDSIMGELRGILEGMRMALSRG-------CEKIEVESDSQQAINFIQRKSIIWSDVEA 407
L ++EG+ +A G + + V S + F+ S + D++A
Sbjct: 453 V-FSKETSVLLALMEGLMLAKFLGLVVWIAEVDLLPVVSILNSSGTFLGDASFVVKDIKA 484
BLAST of Lcy12g010100 vs. NCBI nr
Match:
XP_024036939.1 (uncharacterized protein LOC112096938 [Citrus clementina])
HSP 1 Score: 160.6 bits (405), Expect = 3.2e-35
Identity = 82/200 (41.00%), Postives = 117/200 (58.50%), Query Frame = 0
Query: 2 LSIRSYSSNHIDCDIQWKN-FKWRFSGLYGFPEAGQKAQTWELIRKLKLSGNSPWLLGED 61
+ I SYS +HID + Q N + R +G+YG P+ GQK TW L+R+L + +SPWL D
Sbjct: 78 VQINSYSQHHIDAETQIPNGNRMRVTGVYGHPKTGQKKHTWMLLRRLAVLSSSPWLCCGD 137
Query: 62 MNEILRDEEKLGGQPRDRKLMEDFRQCIDDCELKDLRPSGELFTWYGNRKGH-FIKERLD 121
NEIL +EK GG R+ L+ DFR+ + DC LKD+ G FTW R G F++ERLD
Sbjct: 138 FNEILHPDEKSGGNDRNVNLINDFREVLRDCGLKDVGYRGYAFTWNNGRYGQGFMEERLD 197
Query: 122 RYLCNHLFENLFSAIETTNLDWFFSDHKPIEARVELK--GRKSINRKRNQFRFEELWTRY 181
R++CN + + F E +NLD + SDH P+ V+ + G R +Q +E+ W+ Y
Sbjct: 198 RFVCNKAWSDRFVDCEASNLDTWTSDHCPVLMAVQERSGGMNQRGRHSSQIHYEDTWSSY 257
Query: 182 EECSDLIKENGVWKDKSIWN 198
+ C ++IKE W WN
Sbjct: 258 DVCKEIIKEE--WSLYRNWN 275
BLAST of Lcy12g010100 vs. TAIR 10
Match:
AT4G29090.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 62.4 bits (150), Expect = 1.1e-09
Identity = 61/229 (26.64%), Postives = 98/229 (42.79%), Query Frame = 0
Query: 235 ICWALWSDRNK-ISHGENISPISIRRKWIEDYLDSFRHANVNRHTIRVPANASSSSTRIL 294
+ W LW +RN+ + G + + R+ ED L+ +R IR A + + ++
Sbjct: 363 LLWRLWKNRNELVFRGREFNAQEVLRR-AEDDLEEWR--------IRTEAESCGTKPQV- 422
Query: 295 TNRLHPQDRNGDACWIPPSDGFWKLNTDAACSDSPP-----MICRDKIGEVKVAASIFLD 354
+R+ W PP + K NTDA + + R++ GEVK +
Sbjct: 423 -------NRSSCGRWRPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGA---- 482
Query: 355 YRLDSIMGELRGILEGMR---MALSR-GCEKIEVESDSQQAINFIQRKSIIWSDVEALVT 414
L + L LE MR ++LSR + ESDSQ I + IW ++ +
Sbjct: 483 RALPKLKSVLEAELEAMRWAVLSLSRFQYNYVIFESDSQVLIEILNNDE-IWPSLKPTIQ 542
Query: 415 SIWELAQLFSEISFKFIPRMQNGEADSLAKFA-KFTKCSETWDSVFPSW 453
+ L F+E+ F FIPR N A+ +A+ + F S+ PSW
Sbjct: 543 DLQRLLSQFTEVKFVFIPREGNTLAERVARESLSFLNYDPKLYSIVPSW 569
BLAST of Lcy12g010100 vs. TAIR 10
Match:
AT4G09490.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )
HSP 1 Score: 47.0 bits (110), Expect = 4.9e-05
Identity = 28/81 (34.57%), Postives = 45/81 (55.56%), Query Frame = 0
Query: 354 IMGELRGILEGMRMALSRGCEKIEVESDSQQAINFIQRKSIIWSDVEALVTSIWELAQLF 413
+M E + ++ A S G K+ + SDSQQ I I +S ++ ++ I L+ F
Sbjct: 74 LMAEAIALFLALQYAQSIGITKLSMASDSQQLITAITSESPS-TEFYGIIFDILNLSLGF 133
Query: 414 SEISFKFIPRMQNGEADSLAK 435
+++SF F+PR +N AD LAK
Sbjct: 134 ADVSFSFVPRSENRVADELAK 153
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A2P6SDG4 | 1.5e-38 | 39.09 | Putative RNA-directed DNA polymerase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1... | [more] |
| A0A5C7IIT4 | 8.3e-37 | 26.65 | Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_004125 PE=4 SV=1 | [more] |
| A0A5C7I4W9 | 1.4e-36 | 30.35 | RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_010516 ... | [more] |
| A0A7J6GGL8 | 4.6e-35 | 29.70 | CCHC-type domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_006630 P... | [more] |
| A0A7J6DZ24 | 2.5e-33 | 37.88 | CCHC-type domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_001025 P... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| PRQ56718.1 | 3.1e-38 | 39.09 | putative RNA-directed DNA polymerase [Rosa chinensis] | [more] |
| XP_004310201.2 | 1.3e-36 | 45.26 | PREDICTED: uncharacterized protein LOC101298860 [Fragaria vesca subsp. vesca] | [more] |
| TXG69190.1 | 1.7e-36 | 26.65 | hypothetical protein EZV62_004125 [Acer yangbiense] | [more] |
| TXG63522.1 | 2.9e-36 | 30.35 | hypothetical protein EZV62_010516 [Acer yangbiense] | [more] |
| XP_024036939.1 | 3.2e-35 | 41.00 | uncharacterized protein LOC112096938 [Citrus clementina] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT4G29090.1 | 1.1e-09 | 26.64 | Ribonuclease H-like superfamily protein | [more] |
| AT4G09490.1 | 4.9e-05 | 34.57 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | [more] |
