Lcy12g009890 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy12g009890
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	dehydration-responsive element-binding protein 3-like
Location	Chr12: 36844158 .. 36845543 (-)
RNA-Seq Expression	Lcy12g009890
Synteny	Lcy12g009890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCTCCAACAATGAGCTTCCTCAATCTAACTCCGCCGCCGCCGAGCAACCAAAGAAAATCAAACGCATCAGAAACAATTCCAATTCCAATAAGAGTAGTAGTGAGTCGAACAACAACAACAACAACAATCACCCAGTGTACCGAGGCGTCCGCATGAGGAATTGGGGCAAATGGGTGTCCGAAATCCGCGAGCCTCGCAAGAAATCCCGCATTTGGTTAGGCACTTTCCCCACCCCGGAAATGGCCGCCCGTGCCCACGACGTCGCCGCCTTCAGCATCAAAGGCTCCTCCGCCACCCTCAATTTCCCCGACCTCCTCCACCTCCTCCCTCGCCCCGTCTCCCTCGCCCCTCGCGACGTCCAAGCCGCCGCCGCCAAGGCCGCCCACATGCACAACCTCGACCTCGACGACCACCACTCCCACGTCGACGACGACCTCACCGAGATCATCCAACTCCCCACCCTCGGCTTCCGATTGCCTTCTTCTCATTTGTTCCTCGTCAATCGTGGAGGATTTGTCTGTATTGGTGTAATGTCGCTGGATGGAGATGACCGGAAAAGTAGAGAAGAAAATAGAAAGGGCATTTTAGTAATTTTACCTTTTAGATGGCAATATTTTGCCATTTTTGCAAATAGTTTCAATGGCTGCTATTTTTGTAATTATTTTGGGCCGGTTTGCTACTTTTGCAACCGGCCCTAAAATAAAAGGGATAAATTAAAGGTAAAGAAAAAGAACTGGAGGAACTAAAACCTTTTTTAATCAATAAATTATTCCTTTTTTATTTGACAAGTCAATAAATTATTCCTTTCAAGCAAATGTGAGAGAGTTCATAAATTTGGGCCCAACCATAATCAAACTGGATTGAATTTAGCCCACTTACCAAATTTGTCCCGAATAAATTAGGGAAATTATGCTGGATGACTAGAAAAAAAAATAAGTCGTTTAGTTTTTTGGCTAAAATACTTTCGTTTTCTCGGATGTGGCTGCTGCAAATCAACGGACGCCAGGCGAGTGGTGATTTTCCATGTATTTTTAAAAAGTGATTATTTTGGTCCATGGTCTCAAAATTTTGATACAAATTTTATATTTAATGAAAATTTTTTAATACAAAACTATGACAATATTTCTAGAAATTTACTAGGTAGTACTGTATTAAAATTGTGATTGAAAAATTAGATGAAAAATAAAATGAACGAAATGGTTACCTTTTAGAAATATATGAACCAAAACAAACATTTTGACTGAACTAAAAGTATAGCGACTAAAATAATACTTAAATAAAACCAAAATTTTCTTTCTTTTTTCTTTTCTTTTATTTTAAAGTTACTTTTTCCTTCCTTTTATTTCATGCTTAAAGTTAAAGGTTTCATTATAGGCTTTTAA

mRNA sequence

ATGAGCTCCAACAATGAGCTTCCTCAATCTAACTCCGCCGCCGCCGAGCAACCAAAGAAAATCAAACGCATCAGAAACAATTCCAATTCCAATAAGAGTAGTAGTGAGTCGAACAACAACAACAACAACAATCACCCAGTGTACCGAGGCGTCCGCATGAGGAATTGGGGCAAATGGGTGTCCGAAATCCGCGAGCCTCGCAAGAAATCCCGCATTTGGTTAGGCACTTTCCCCACCCCGGAAATGGCCGCCCGTGCCCACGACGTCGCCGCCTTCAGCATCAAAGGCTCCTCCGCCACCCTCAATTTCCCCGACCTCCTCCACCTCCTCCCTCGCCCCGTCTCCCTCGCCCCTCGCGACGTCCAAGCCGCCGCCGCCAAGGCCGCCCACATGCACAACCTCGACCTCGACGACCACCACTCCCACGTCGACGACGACCTCACCGAGATCATCCAACTCCCCACCCTCGGCTTCCGATTGCCTTCTTCTCATTTGTTCCTCGTCAATCGTGGAGGATTTGTCTGTATTGGTGTAATGTCGCTGGATGGAGATGACCGGAAAAGCTTTTAA

Coding sequence (CDS)

ATGAGCTCCAACAATGAGCTTCCTCAATCTAACTCCGCCGCCGCCGAGCAACCAAAGAAAATCAAACGCATCAGAAACAATTCCAATTCCAATAAGAGTAGTAGTGAGTCGAACAACAACAACAACAACAATCACCCAGTGTACCGAGGCGTCCGCATGAGGAATTGGGGCAAATGGGTGTCCGAAATCCGCGAGCCTCGCAAGAAATCCCGCATTTGGTTAGGCACTTTCCCCACCCCGGAAATGGCCGCCCGTGCCCACGACGTCGCCGCCTTCAGCATCAAAGGCTCCTCCGCCACCCTCAATTTCCCCGACCTCCTCCACCTCCTCCCTCGCCCCGTCTCCCTCGCCCCTCGCGACGTCCAAGCCGCCGCCGCCAAGGCCGCCCACATGCACAACCTCGACCTCGACGACCACCACTCCCACGTCGACGACGACCTCACCGAGATCATCCAACTCCCCACCCTCGGCTTCCGATTGCCTTCTTCTCATTTGTTCCTCGTCAATCGTGGAGGATTTGTCTGTATTGGTGTAATGTCGCTGGATGGAGATGACCGGAAAAGCTTTTAA

Protein sequence

MSSNNELPQSNSAAAEQPKKIKRIRNNSNSNKSSSESNNNNNNNHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLDLDDHHSHVDDDLTEIIQLPTLGFRLPSSHLFLVNRGGFVCIGVMSLDGDDRKSF

Homology

[Close]

BLAST of Lcy12g009890 vs. ExPASy Swiss-Prot
Match: Q9M080 (Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 GN=ERF043 PE=2 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 6.5e-38
Identity = 94/177 (53.11%), Postives = 106/177 (59.89%), Query Frame = 0


Query: 33  SSSESNNNNNNNHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAAF 92
           SSS+     NN  PVYRGVRMR+WGKWVSEIREPRKKSRIWLGTFPT EMA RAHDVAA 
Sbjct: 4   SSSDKEKKENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAM 63

Query: 93  SIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLDLDD-------------- 152
           SIKG+SA LNFP+L  LLPRPVSL+PRDV+AAA KAA M   D D               
Sbjct: 64  SIKGTSAILNFPELSKLLPRPVSLSPRDVRAAATKAALM---DFDTTAFRSDTETSETTT 123

Query: 153 ---------------------------HHSHVDDDLTEIIQLPTLGFRLPSSHLFLV 169
                                        S V DDL EI++LP+LG  L  S+ F++
Sbjct: 124 SNKMSESSESNETVSFSSSSWSSVTSIEESTVSDDLDEIVKLPSLGTSLNESNEFVI 177

[Close]

BLAST of Lcy12g009890 vs. ExPASy Swiss-Prot
Match: Q9LYD3 (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DREB3 PE=2 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 8.0e-36
Identity = 89/164 (54.27%), Postives = 107/164 (65.24%), Query Frame = 0


Query: 26  NNSNSNKSSSESN------NNNNNNHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPT 85
           ++S S+KS +E +        ++  HPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPT
Sbjct: 23  SDSVSDKSKAEQSEKKTKRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPT 82

Query: 86  PEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHN------ 145
           PEMAARAHDVAA SIKG++A LNFP+L    PRPVSL+PRD+Q AA KAAHM        
Sbjct: 83  PEMAARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQTAALKAAHMEPTTSFSS 142

Query: 146 --------------------LDLDDHHSHVDDDLTEIIQLPTLG 158
                               +DL    S   ++L EI++LP+LG
Sbjct: 143 STSSSSSLSSTSSLESLVLVMDLSRTES---EELGEIVELPSLG 183

[Close]

BLAST of Lcy12g009890 vs. ExPASy Swiss-Prot
Match: Q39127 (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN=TINY PE=2 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.3e-35
Identity = 74/101 (73.27%), Postives = 82/101 (81.19%), Query Frame = 0


Query: 31  NKSSSESNNNNNNNHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVA 90
           N+   +    ++  HPVYRGVR RNWGKWVSEIREPRKKSRIWLGTFP+PEMAARAHDVA
Sbjct: 19  NEEEKKKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVA 78

Query: 91  AFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHM 132
           A SIKG+SA LNFPDL    PRP SL+PRD+Q AA KAAHM
Sbjct: 79  ALSIKGASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHM 119

[Close]

BLAST of Lcy12g009890 vs. ExPASy Swiss-Prot
Match: Q52QU1 (Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana OX=3702 GN=ERF042 PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 3.1e-32
Identity = 77/127 (60.63%), Postives = 91/127 (71.65%), Query Frame = 0


Query: 24  IRNNSNSNKSSSESNNNNNNNHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMA 83
           + ++ +  + SS+          VYRG RMR+WGKWVSEIREPRKKSRIWLGTFPT EMA
Sbjct: 2   VDSHGSDTECSSKKKKEKTKEKGVYRGARMRSWGKWVSEIREPRKKSRIWLGTFPTAEMA 61

Query: 84  ARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLDLDDHHSHV 143
           ARAHDVAA SIKGSSA LNFP+L   LPRPVSL+ +D+QAAAA+AA M   D      H+
Sbjct: 62  ARAHDVAALSIKGSSAILNFPELADFLPRPVSLSQQDIQAAAAEAALM---DFKTVPFHL 121

Query: 144 DDDLTEI 151
            DD T +
Sbjct: 122 QDDSTPL 125

[Close]

BLAST of Lcy12g009890 vs. ExPASy Swiss-Prot
Match: Q9M210 (Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana OX=3702 GN=ERF035 PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.6e-31
Identity = 79/157 (50.32%), Postives = 103/157 (65.61%), Query Frame = 0


Query: 10  SNSAAAEQPKKIKRIRNNSNSNKSSSESNNNNNNNHPVYRGVRMRNWGKWVSEIREPRKK 69
           ++S+ +    K   +++N +  K    + +++N N   YRGVRMR+WGKWVSEIREPRKK
Sbjct: 33  TSSSDSWSTSKRSLVQDNDSGGKRRKSNVSDDNKNPTSYRGVRMRSWGKWVSEIREPRKK 92

Query: 70  SRIWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAA 129
           SRIWLGT+PT EMAARAHDVAA +IKG+S  LNFP+L  LLPRPVS +P+D+QAAA KAA
Sbjct: 93  SRIWLGTYPTAEMAARAHDVAALAIKGNSGFLNFPELSGLLPRPVSCSPKDIQAAATKAA 152

Query: 130 HMHNLDLDDHHSHVDDDLTEIIQLPTLGFRLPSSHLF 167
                        + D+L+    L T      SS +F
Sbjct: 153 EATTWHKPVIDKKLADELSHSELLSTAQSSTSSSFVF 189

[Close]

BLAST of Lcy12g009890 vs. ExPASy TrEMBL
Match: A0A6J1KJP2 (dehydration-responsive element-binding protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111496321 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 1.5e-48
Identity = 108/148 (72.97%), Postives = 119/148 (80.41%), Query Frame = 0


Query: 18  PKKIKRIRNNSNSNKSSSESNNNNNNNHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTF 77
           PKKIKRIRN  +++ S       N++ HPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTF
Sbjct: 9   PKKIKRIRNPESNSDS-------NSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTF 68

Query: 78  PTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLD-- 137
           P+PEMAARAHDVAA SIKG+SA LNFPDL+HLLPRPVSLAPRDVQAAAA+AAHMHNL   
Sbjct: 69  PSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDVQAAAAQAAHMHNLSPN 128

Query: 138 ------LDDHHSHVDDDLTEIIQLPTLG 158
                   D  S   D+LTEI+QLPTLG
Sbjct: 129 NIPTTTTTDDASDASDELTEIVQLPTLG 149

[Close]

BLAST of Lcy12g009890 vs. ExPASy TrEMBL
Match: A0A6J1GJB4 (dehydration-responsive element-binding protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111454379 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 2.1e-47
Identity = 105/149 (70.47%), Postives = 118/149 (79.19%), Query Frame = 0


Query: 18  PKKIKRIRNNSNSNKSSSESNNNNNNNHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTF 77
           PKKIKRIRN  +++ S       N++ HPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTF
Sbjct: 9   PKKIKRIRNPESNSDS-------NSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTF 68

Query: 78  PTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLD-- 137
           P+PEMAARAHDVAA SIKG+SA LNFPDL+HLLPRPVSLAPRD+QAAA +AAHMHNL   
Sbjct: 69  PSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDIQAAATQAAHMHNLSPN 128

Query: 138 -------LDDHHSHVDDDLTEIIQLPTLG 158
                    D  S   D+LTEI+QLP+LG
Sbjct: 129 NIPTTATTTDDTSDASDELTEIVQLPSLG 150

[Close]

BLAST of Lcy12g009890 vs. ExPASy TrEMBL
Match: A0A5A7VBN9 (Ethylene-responsive transcription factor TINY-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003660 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 3.0e-46
Identity = 108/166 (65.06%), Postives = 129/166 (77.71%), Query Frame = 0


Query: 2   SSNNELPQSNSAAAEQPKKIKRIRNNSNSNKSSSESNNNNNNNHPVYRGVRMRNWGKWVS 61
           S + E   S+S++++  KK KRI +NSNS         ++N+ H VYRGVRMRNWGKWVS
Sbjct: 8   SPSPETESSSSSSSDSNKKPKRINSNSNS---------SSNSKHAVYRGVRMRNWGKWVS 67

Query: 62  EIREPRKKSRIWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDV 121
           EIREPRKKSRIWLGTFP+PEMAARAHDVAA SIKG+SA LNFPDL+HLLPRPVSLAPRDV
Sbjct: 68  EIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDV 127

Query: 122 QAAAAKAAHMHNL----DLDDHH------SHVDDDLTEIIQLPTLG 158
           QAAAAKAAHMHNL    + ++H+      S   D+L+EI++LP LG
Sbjct: 128 QAAAAKAAHMHNLSSNANTNNHNTNSNSSSAFSDELSEIVELPALG 164

[Close]

BLAST of Lcy12g009890 vs. ExPASy TrEMBL
Match: A0A0A0LPS6 (DREB-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G374590 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 6.8e-46
Identity = 108/166 (65.06%), Postives = 129/166 (77.71%), Query Frame = 0


Query: 2   SSNNELPQSNSAAAEQPKKIKRIRNNSNSNKSSSESNNNNNNNHPVYRGVRMRNWGKWVS 61
           S ++E   S+S++++  KK KRI +NSNS         N+N+   VYRGVRMRNWGKWVS
Sbjct: 8   SPSSETESSSSSSSDSNKKPKRINSNSNS---------NSNSKLAVYRGVRMRNWGKWVS 67

Query: 62  EIREPRKKSRIWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDV 121
           EIREPRKKSRIWLGTFP+PEMAARAHDVAA SIKG+SA LNFPDL+HLLPRPVSLAPRDV
Sbjct: 68  EIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDV 127

Query: 122 QAAAAKAAHMHNL----DLDDHH------SHVDDDLTEIIQLPTLG 158
           QAAAAKAAHMHNL    + ++H+      S   D+L+EI++LP LG
Sbjct: 128 QAAAAKAAHMHNLSSNANTNNHNTNSNSSSAFSDELSEIVELPALG 164

[Close]

BLAST of Lcy12g009890 vs. ExPASy TrEMBL
Match: Q75UJ6 (DREB-like protein OS=Cucumis melo OX=3656 GN=CMe-DREB1 PE=2 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 1.2e-45
Identity = 107/166 (64.46%), Postives = 127/166 (76.51%), Query Frame = 0


Query: 2   SSNNELPQSNSAAAEQPKKIKRIRNNSNSNKSSSESNNNNNNNHPVYRGVRMRNWGKWVS 61
           S + E   S+S++++  KK KRI +NS+S           N+ H VYRGVRMRNWGKWVS
Sbjct: 8   SPSPETESSSSSSSDSNKKPKRINSNSSS-----------NSKHAVYRGVRMRNWGKWVS 67

Query: 62  EIREPRKKSRIWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDV 121
           EIREPRKKSRIWLGTFP+PEMAARAHDVAA SIKG+SA LNFPDL+HLLPRPVSLAPRDV
Sbjct: 68  EIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDV 127

Query: 122 QAAAAKAAHMHNL----DLDDHH------SHVDDDLTEIIQLPTLG 158
           QAAAAKAAHMHNL    + ++H+      S   D+L+EI++LP LG
Sbjct: 128 QAAAAKAAHMHNLSSNANTNNHNTNSNSSSAFSDELSEIVELPALG 162

[Close]

BLAST of Lcy12g009890 vs. NCBI nr
Match: XP_023002497.1 (dehydration-responsive element-binding protein 3-like [Cucurbita maxima])

HSP 1 Score: 202.6 bits (514), Expect = 3.0e-48
Identity = 108/148 (72.97%), Postives = 119/148 (80.41%), Query Frame = 0


Query: 18  PKKIKRIRNNSNSNKSSSESNNNNNNNHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTF 77
           PKKIKRIRN  +++ S       N++ HPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTF
Sbjct: 9   PKKIKRIRNPESNSDS-------NSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTF 68

Query: 78  PTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLD-- 137
           P+PEMAARAHDVAA SIKG+SA LNFPDL+HLLPRPVSLAPRDVQAAAA+AAHMHNL   
Sbjct: 69  PSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDVQAAAAQAAHMHNLSPN 128

Query: 138 ------LDDHHSHVDDDLTEIIQLPTLG 158
                   D  S   D+LTEI+QLPTLG
Sbjct: 129 NIPTTTTTDDASDASDELTEIVQLPTLG 149

[Close]

BLAST of Lcy12g009890 vs. NCBI nr
Match: XP_038885669.1 (ethylene-responsive transcription factor TINY-like [Benincasa hispida])

HSP 1 Score: 201.1 bits (510), Expect = 8.8e-48
Identity = 109/167 (65.27%), Postives = 126/167 (75.45%), Query Frame = 0


Query: 2   SSNNELPQSNSAAAEQPKKIKRIRNNSNSNKSSSESNNNNNNNHPVYRGVRMRNWGKWVS 61
           SS  E   ++S++++  KK KRI NNS S           N+ HP+YRGVRMRNWGKWVS
Sbjct: 9   SSETESSTTSSSSSDSNKKPKRINNNSTS-----------NSKHPLYRGVRMRNWGKWVS 68

Query: 62  EIREPRKKSRIWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDV 121
           EIREPRKKSRIWLGTFP+PEMAARAHDVAA SIKG+SA LNFPDL+HLLPRPVSLAPRDV
Sbjct: 69  EIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDV 128

Query: 122 QAAAAKAAHMHNLDLDDHH-----------SHVDDDLTEIIQLPTLG 158
           QAAAAKAAHMHNL  + +H           S   D+LTEI++LP+LG
Sbjct: 129 QAAAAKAAHMHNLSSNTNHSTNNNNNTNSSSAFSDELTEIVELPSLG 164

[Close]

BLAST of Lcy12g009890 vs. NCBI nr
Match: XP_023536694.1 (dehydration-responsive element-binding protein 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 198.7 bits (504), Expect = 4.4e-47
Identity = 105/149 (70.47%), Postives = 118/149 (79.19%), Query Frame = 0


Query: 18  PKKIKRIRNNSNSNKSSSESNNNNNNNHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTF 77
           PKKIKRIRN  +++ S       N++ HPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTF
Sbjct: 9   PKKIKRIRNPESNSDS-------NSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTF 68

Query: 78  PTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLD-- 137
           P+PEMAARAHDVAA SIKG+SA LNFPDL+HLLPRPVSLAPRD+QAAA +AAHMHNL   
Sbjct: 69  PSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDIQAAATQAAHMHNLSPN 128

Query: 138 -------LDDHHSHVDDDLTEIIQLPTLG 158
                    D  S   D+LTEI+QLP+LG
Sbjct: 129 NIPTTTTTTDDASDASDELTEIVQLPSLG 150

[Close]

BLAST of Lcy12g009890 vs. NCBI nr
Match: KAG7020305.1 (Dehydration-responsive element-binding protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 198.7 bits (504), Expect = 4.4e-47
Identity = 105/149 (70.47%), Postives = 118/149 (79.19%), Query Frame = 0


Query: 18  PKKIKRIRNNSNSNKSSSESNNNNNNNHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTF 77
           PKKIKRIRN  +++ S       N++ HPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTF
Sbjct: 9   PKKIKRIRNPESNSDS-------NSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTF 68

Query: 78  PTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLD-- 137
           P+PEMAARAHDVAA SIKG+SA LNFPDL+HLLPRPVSLAPRD+QAAA +AAHMHNL   
Sbjct: 69  PSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDIQAAATQAAHMHNLSPN 128

Query: 138 -------LDDHHSHVDDDLTEIIQLPTLG 158
                    D  S   D+LTEI+QLP+LG
Sbjct: 129 NIPTTTTTTDDASDASDELTEIVQLPSLG 150

[Close]

BLAST of Lcy12g009890 vs. NCBI nr
Match: KAG6585388.1 (Dehydration-responsive element-binding protein 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 198.7 bits (504), Expect = 4.4e-47
Identity = 105/149 (70.47%), Postives = 118/149 (79.19%), Query Frame = 0


Query: 18  PKKIKRIRNNSNSNKSSSESNNNNNNNHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTF 77
           PKKIKRIRN  +++ S       N++ HPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTF
Sbjct: 9   PKKIKRIRNPESNSDS-------NSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTF 68

Query: 78  PTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLD-- 137
           P+PEMAARAHDVAA SIKG+SA LNFPDL+HLLPRPVSLAPRD+QAAA +AAHMHNL   
Sbjct: 69  PSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDIQAAATQAAHMHNLSPN 128

Query: 138 -------LDDHHSHVDDDLTEIIQLPTLG 158
                    D  S   D+LTEI+QLP+LG
Sbjct: 129 NIPTITTTTDDASDASDELTEIVQLPSLG 150

[Close]

BLAST of Lcy12g009890 vs. TAIR 10
Match: AT4G32800.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 158.7 bits (400), Expect = 4.6e-39
Identity = 94/177 (53.11%), Postives = 106/177 (59.89%), Query Frame = 0


Query: 33  SSSESNNNNNNNHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAAF 92
           SSS+     NN  PVYRGVRMR+WGKWVSEIREPRKKSRIWLGTFPT EMA RAHDVAA 
Sbjct: 4   SSSDKEKKENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAM 63

Query: 93  SIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLDLDD-------------- 152
           SIKG+SA LNFP+L  LLPRPVSL+PRDV+AAA KAA M   D D               
Sbjct: 64  SIKGTSAILNFPELSKLLPRPVSLSPRDVRAAATKAALM---DFDTTAFRSDTETSETTT 123

Query: 153 ---------------------------HHSHVDDDLTEIIQLPTLGFRLPSSHLFLV 169
                                        S V DDL EI++LP+LG  L  S+ F++
Sbjct: 124 SNKMSESSESNETVSFSSSSWSSVTSIEESTVSDDLDEIVKLPSLGTSLNESNEFVI 177

[Close]

BLAST of Lcy12g009890 vs. TAIR 10
Match: AT5G11590.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 151.8 bits (382), Expect = 5.7e-37
Identity = 89/164 (54.27%), Postives = 107/164 (65.24%), Query Frame = 0


Query: 26  NNSNSNKSSSESN------NNNNNNHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPT 85
           ++S S+KS +E +        ++  HPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPT
Sbjct: 23  SDSVSDKSKAEQSEKKTKRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPT 82

Query: 86  PEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHN------ 145
           PEMAARAHDVAA SIKG++A LNFP+L    PRPVSL+PRD+Q AA KAAHM        
Sbjct: 83  PEMAARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQTAALKAAHMEPTTSFSS 142

Query: 146 --------------------LDLDDHHSHVDDDLTEIIQLPTLG 158
                               +DL    S   ++L EI++LP+LG
Sbjct: 143 STSSSSSLSSTSSLESLVLVMDLSRTES---EELGEIVELPSLG 183

[Close]

BLAST of Lcy12g009890 vs. TAIR 10
Match: AT5G25810.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 150.2 bits (378), Expect = 1.7e-36
Identity = 74/101 (73.27%), Postives = 82/101 (81.19%), Query Frame = 0


Query: 31  NKSSSESNNNNNNNHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVA 90
           N+   +    ++  HPVYRGVR RNWGKWVSEIREPRKKSRIWLGTFP+PEMAARAHDVA
Sbjct: 19  NEEEKKKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVA 78

Query: 91  AFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHM 132
           A SIKG+SA LNFPDL    PRP SL+PRD+Q AA KAAHM
Sbjct: 79  ALSIKGASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHM 119

[Close]

BLAST of Lcy12g009890 vs. TAIR 10
Match: AT2G25820.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 139.8 bits (351), Expect = 2.2e-33
Identity = 77/127 (60.63%), Postives = 91/127 (71.65%), Query Frame = 0


Query: 24  IRNNSNSNKSSSESNNNNNNNHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMA 83
           + ++ +  + SS+          VYRG RMR+WGKWVSEIREPRKKSRIWLGTFPT EMA
Sbjct: 2   VDSHGSDTECSSKKKKEKTKEKGVYRGARMRSWGKWVSEIREPRKKSRIWLGTFPTAEMA 61

Query: 84  ARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLDLDDHHSHV 143
           ARAHDVAA SIKGSSA LNFP+L   LPRPVSL+ +D+QAAAA+AA M   D      H+
Sbjct: 62  ARAHDVAALSIKGSSAILNFPELADFLPRPVSLSQQDIQAAAAEAALM---DFKTVPFHL 121

Query: 144 DDDLTEI 151
            DD T +
Sbjct: 122 QDDSTPL 125

[Close]

BLAST of Lcy12g009890 vs. TAIR 10
Match: AT3G60490.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 137.5 bits (345), Expect = 1.1e-32
Identity = 79/157 (50.32%), Postives = 103/157 (65.61%), Query Frame = 0


Query: 10  SNSAAAEQPKKIKRIRNNSNSNKSSSESNNNNNNNHPVYRGVRMRNWGKWVSEIREPRKK 69
           ++S+ +    K   +++N +  K    + +++N N   YRGVRMR+WGKWVSEIREPRKK
Sbjct: 33  TSSSDSWSTSKRSLVQDNDSGGKRRKSNVSDDNKNPTSYRGVRMRSWGKWVSEIREPRKK 92

Query: 70  SRIWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAA 129
           SRIWLGT+PT EMAARAHDVAA +IKG+S  LNFP+L  LLPRPVS +P+D+QAAA KAA
Sbjct: 93  SRIWLGTYPTAEMAARAHDVAALAIKGNSGFLNFPELSGLLPRPVSCSPKDIQAAATKAA 152

Query: 130 HMHNLDLDDHHSHVDDDLTEIIQLPTLGFRLPSSHLF 167
                        + D+L+    L T      SS +F
Sbjct: 153 EATTWHKPVIDKKLADELSHSELLSTAQSSTSSSFVF 189

The following BLAST results are available for this feature:

BLAST of Lcy12g009890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M080	6.5e-38	53.11	Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LYD3	8.0e-36	54.27	Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702...	[more]
Q39127	2.3e-35	73.27	Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q52QU1	3.1e-32	60.63	Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9M210	1.6e-31	50.32	Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Lcy12g009890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KJP2	1.5e-48	72.97	dehydration-responsive element-binding protein 3-like OS=Cucurbita maxima OX=366...	[more]
A0A6J1GJB4	2.1e-47	70.47	dehydration-responsive element-binding protein 3-like OS=Cucurbita moschata OX=3...	[more]
A0A5A7VBN9	3.0e-46	65.06	Ethylene-responsive transcription factor TINY-like OS=Cucumis melo var. makuwa O...	[more]
A0A0A0LPS6	6.8e-46	65.06	DREB-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G374590 PE=4 SV=1	[more]
Q75UJ6	1.2e-45	64.46	DREB-like protein OS=Cucumis melo OX=3656 GN=CMe-DREB1 PE=2 SV=1	[more]

BLAST of Lcy12g009890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023002497.1	3.0e-48	72.97	dehydration-responsive element-binding protein 3-like [Cucurbita maxima]	[more]
XP_038885669.1	8.8e-48	65.27	ethylene-responsive transcription factor TINY-like [Benincasa hispida]	[more]
XP_023536694.1	4.4e-47	70.47	dehydration-responsive element-binding protein 3-like [Cucurbita pepo subsp. pep...	[more]
KAG7020305.1	4.4e-47	70.47	Dehydration-responsive element-binding protein 3, partial [Cucurbita argyrosperm...	[more]
KAG6585388.1	4.4e-47	70.47	Dehydration-responsive element-binding protein 3, partial [Cucurbita argyrosperm...	[more]

BLAST of Lcy12g009890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32800.1	4.6e-39	53.11	Integrase-type DNA-binding superfamily protein	[more]
AT5G11590.1	5.7e-37	54.27	Integrase-type DNA-binding superfamily protein	[more]
AT5G25810.1	1.7e-36	73.27	Integrase-type DNA-binding superfamily protein	[more]
AT2G25820.1	2.2e-33	60.63	Integrase-type DNA-binding superfamily protein	[more]
AT3G60490.1	1.1e-32	50.32	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 70..86 score: 66.52 coord: 48..59 score: 71.21
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 47..110 e-value: 7.2E-36 score: 135.1
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 46..96 e-value: 1.7E-14 score: 53.8
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 47..104 score: 23.235113
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 48..106 e-value: 6.23804E-35 score: 115.447
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 47..105 e-value: 1.5E-24 score: 87.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..49
None	No IPR available	PANTHER	PTHR31985:SF5	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042	coord: 11..139
None	No IPR available	PANTHER	PTHR31985	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED	coord: 11..139
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 47..105

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy12g009890.1	Lcy12g009890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity