Lcy12g008530 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy12g008530
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Small RNA degrading nuclease 5-like isoform X1
Location	Chr12: 34625931 .. 34628614 (-)
RNA-Seq Expression	Lcy12g008530
Synteny	Lcy12g008530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATATCCAATTTCTTCATTCAAAAAATTATCCGCGAGAAAATTATTTTACTACATACCCAAAAATCCACACCCAAATTCCAAAATCTATTCCACCTCATATCCTCACAAAGAACCCATCTTTCTCTCTTCAACATTGCTTCCTTCATCTTCTCCACCGTCTTCTCTCTCCTCTCAGTCTCCGCCCGTTGTCTACACCGTCTCGCTTGCATCTACGCAGCACGTGACGTTTCTTTAAAGCACGTGATCAGCGTTCTGCCTAAGATCTGGAAGCGGCTTCTTGTTACCTTCTTGTGGCTTTTCGCAGCTAGGTTTGCCTTAAACTTTGCTGCAAAATCAGTGTTCTTTTTCGTAGAGTCAGTTGGTCTCTCGGCGTACGAAAAAAGCAATTTCAAAATTATTATTGTTGTGTTCGAGATCTTTCACCTTGTGGCGATTTTTGGTTTGATGATAATCTTGCAACTGTCATACGTTGTTTCGGTTTTGGAAGAGTCGTGTGGGTTCGAAGCCATGGTCAGAAGCAAGGCGTTGCTTGAAGGGAAAATGACAGTGGCCATGTTTCTTTTCCTGTCGGTTATTTTGCCTGTCTTTGTGTTTGACGTTGTGTTTAATCATGTGGTTGTTCGGTCGGTGTCGATTGGAGTGGTGGGTAAGAGTATTGTGGGGATTATTTGGGTCTTGTCGTTTTTGTTGTATCATTTGATCAAGTTTGTGGCAGAAACTGTGCTGTATTTCGTCTGCAAATCCTACCATCAAGAGAGTATCGACAAGTACTCTGCTCCTTTCAAGCCATCTTCAAGGTTATTTGACCGCAGACTATGTTCCATTGAAGTGTTCATGTTGAGTTGCAAGTTGTTTGAACCTTTTATATATATGGTTTTACTTAGAGTTTTATTTGGTTGCATACTGATATGTAGATGTCTCCTTATACATACTTCCGTTAAAATGTTGACAATTAAGAGAGAGAAAAATTTCTCATTTTCTACCTTTCTCTTTCTTAGTTGACCAGATTTGAATGAAATGTGTAGGGAGATATCCTTACACACCAGTATGCACAAAGCCAAATATTTGTTCTCTGTAGTAAATATAAATGTGATGGTATAAAAAAAGTTGAACTGAGGTCACTAATGTTTCAACCAATTGAGTTATATGTTTAAGTCTAGTGTAAATTGTGTATTATATCCAAGTTATTTATGTTGAAGTATGTGCTGGAAACTTTCAAATTTAGAATCAAACAAGAAATATTTGAAAGAAAACTAAAACACTTGGATTGGTAATTCTCCAAGAAACTACAAACTTGATTCACACTTTCTTTAACTCTTTGTTTTCCCCCACACACCTTGCTTCAAACATACTAAAGACATCCTATTTATTGGACTAGAAAAATATATGGATCCAACTCCCATCATAAAGGCAGGAATCTAATTAATTTCATGAGTTTACTTAACTACACACCATCCTAAACAACTAAATACATAAACGTAGTTAATTAAATATTAATTCATGTATAACATATCAAATTTAAGTACATGTTTAGGCGGGGAAATTGCAAAAAATAGGATAAAAAATAGGGAGGCAAAGACATTTAGTCCCCTTTTTATTTTGATAGACTAATAGGACTTTGGGGGTGTGAAAAGACTATTTTATCCTTTGGAGTAAAAACCCTCATTTATATTCAATACCCATTTATTTTATTTCACTCTCTCTTATCTGTCTAGTTTTTCTCACTCTCTCTTGTCTCTCTAGTTTCTCTCAACCTCACCATGCTCAAGCATTTCATCTCCATTCTTCAAAATTTATAGCATCTTCAAGCTTCTCTCAATCCCATTCTCTCTTTTTCTCTCATTGGTAAGATTTTATATTTTGGTCCTCATGTTTATTTTTCTCTTGAAGTCTTTTTTTCAACCCAGTCTCTTATTATGTTGGACATTTTTTGTAATAGATTATATATTTTCTTCAATAAATTTTACATTTGTTGGGAATCTTTTTTTCTTTTTAAAAATTTTTGTAACTTTTTTTCCCTTTACTTCTTTGTTTAATTTTCTTGCACTCTTGTGGTTATGAGAAGGTGTGAGAAAAAATTACAAAGCATTAGTTTTAGAATTTTTCTCGCATCTTCTCGCTGTAAGAAAGTGCGAGAAATGTTACAACACCTTAATTTTCAAAGGGTTAGAATTTTTCTCGCACCTTTTTGCTGCAAGAAGGTGCGAGAAAAAATTATGAAACATTAATTTTGGAGGTATTAGAATTTTTCTCGTATCTTCTCACTGCAAGAAAGTGCGAGAAATGTGACAACATCTTAATTTTCAAAAGGTTAGAATTTTTCTCGCACCTTCTTGCTGCAAGAAGATGCGAGAAAAAATTACAAAGCATCAATTTTGGAGGTGTTAGAATTAGAAATGTTACAACACCTTAATTTTCAATGTATTGGAATTTTTCTCCCACTCTTCTCGGTGCAAGAAGATGCGAGAAAAATTGCAAAGTGTTTATTGTAGAGGAGTTGAAATTTTTCTCATACCTTCTCGCTGCAAGAAAAATTACAACTAATTTTTAACGTGCCAGATTTTTTTTTTTTTTTTGTAACTTTCTCTCTACTAATGAACCATTTCTTGCATGGTTAACTATTCTCCTTATTTGTTTTTGTTTTTTTTTTAGGAATTACAAATTTTGTGATAATTTAA

mRNA sequence

ATGGAAATATCCAATTTCTTCATTCAAAAAATTATCCGCGAGAAAATTATTTTACTACATACCCAAAAATCCACACCCAAATTCCAAAATCTATTCCACCTCATATCCTCACAAAGAACCCATCTTTCTCTCTTCAACATTGCTTCCTTCATCTTCTCCACCGTCTTCTCTCTCCTCTCAGTCTCCGCCCGTTGTCTACACCGTCTCGCTTGCATCTACGCAGCACGTGACGTTTCTTTAAAGCACGTGATCAGCGTTCTGCCTAAGATCTGGAAGCGGCTTCTTGTTACCTTCTTGTGGCTTTTCGCAGCTAGGTTTGCCTTAAACTTTGCTGCAAAATCAGTGTTCTTTTTCGTAGAGTCAGTTGGTCTCTCGGCGTACGAAAAAAGCAATTTCAAAATTATTATTGTTGTGTTCGAGATCTTTCACCTTGTGGCGATTTTTGGTTTGATGATAATCTTGCAACTGTCATACGTTGTTTCGGTTTTGGAAGAGTCGTGTGGGTTCGAAGCCATGGTCAGAAGCAAGGCGTTGCTTGAAGGGAAAATGACAGTGGCCATGTTTCTTTTCCTGTCGGTTATTTTGCCTGTCTTTGTGTTTGACGTTGTGTTTAATCATGTGGTTGTTCGGTCGGTGTCGATTGGAGTGGTGGGAATTACAAATTTTGTGATAATTTAA

Coding sequence (CDS)

ATGGAAATATCCAATTTCTTCATTCAAAAAATTATCCGCGAGAAAATTATTTTACTACATACCCAAAAATCCACACCCAAATTCCAAAATCTATTCCACCTCATATCCTCACAAAGAACCCATCTTTCTCTCTTCAACATTGCTTCCTTCATCTTCTCCACCGTCTTCTCTCTCCTCTCAGTCTCCGCCCGTTGTCTACACCGTCTCGCTTGCATCTACGCAGCACGTGACGTTTCTTTAAAGCACGTGATCAGCGTTCTGCCTAAGATCTGGAAGCGGCTTCTTGTTACCTTCTTGTGGCTTTTCGCAGCTAGGTTTGCCTTAAACTTTGCTGCAAAATCAGTGTTCTTTTTCGTAGAGTCAGTTGGTCTCTCGGCGTACGAAAAAAGCAATTTCAAAATTATTATTGTTGTGTTCGAGATCTTTCACCTTGTGGCGATTTTTGGTTTGATGATAATCTTGCAACTGTCATACGTTGTTTCGGTTTTGGAAGAGTCGTGTGGGTTCGAAGCCATGGTCAGAAGCAAGGCGTTGCTTGAAGGGAAAATGACAGTGGCCATGTTTCTTTTCCTGTCGGTTATTTTGCCTGTCTTTGTGTTTGACGTTGTGTTTAATCATGTGGTTGTTCGGTCGGTGTCGATTGGAGTGGTGGGAATTACAAATTTTGTGATAATTTAA

Protein sequence

MEISNFFIQKIIREKIILLHTQKSTPKFQNLFHLISSQRTHLSLFNIASFIFSTVFSLLSVSARCLHRLACIYAARDVSLKHVISVLPKIWKRLLVTFLWLFAARFALNFAAKSVFFFVESVGLSAYEKSNFKIIIVVFEIFHLVAIFGLMIILQLSYVVSVLEESCGFEAMVRSKALLEGKMTVAMFLFLSVILPVFVFDVVFNHVVVRSVSIGVVGITNFVII

Homology

[Close]

BLAST of Lcy12g008530 vs. ExPASy TrEMBL
Match: A0A6J1FCY9 (uncharacterized protein LOC111442875 OS=Cucurbita moschata OX=3662 GN=LOC111442875 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 2.6e-36
Identity = 106/207 (51.21%), Postives = 140/207 (67.63%), Query Frame = 0


Query: 16  IILLHTQKSTPKFQNLFHLISSQRTHLSLFNIASFIFSTVFSLLSVSARCLHRLACIYAA 75
           +IL HTQK TP+F  L  L+SS+R ++ LF +AS IFST+FSLLS SA  ++ +ACIY A
Sbjct: 1   MILQHTQKFTPQFLKLSDLVSSERIYVVLFTLASLIFSTIFSLLSTSA-VVYTVACIYTA 60

Query: 76  RDVSLKHVISVLPKIWKRLLVTFLWLFAARFALNFAAKSVFFFVESVGLSAYEKSNFKI- 135
           RDVS   VI VLPK+W++LLVTFL +FAA  A NF A  V F +  + +  Y  ++    
Sbjct: 61  RDVSFDTVIRVLPKVWRKLLVTFLCVFAAFLAFNFVAFGVMFLIPVIAIIIYGPNDHHFL 120

Query: 136 -----IIVVFEIFHLVAIFGLMIILQLSYVVSVLEESCGFEAMVRSKALLEGKMTVAMFL 195
                I   F IF+L AI+ L II QLS VVSVLE SCGF+AM +SK LL+GKM + + L
Sbjct: 121 AGIGTIFFFFTIFYLAAIWYLTIIWQLSSVVSVLEASCGFKAMAKSKGLLKGKMKMVVKL 180

Query: 196 FLSVILPVFVFDVVFNHVVVRSVSIGV 217
            + + LP+ V  +VF ++VVRS S+GV
Sbjct: 181 TMLLNLPLGVAQLVFYYLVVRSASVGV 206

[Close]

BLAST of Lcy12g008530 vs. ExPASy TrEMBL
Match: A0A5A7V1U2 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G00470 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 1.0e-32
Identity = 105/229 (45.85%), Postives = 148/229 (64.63%), Query Frame = 0


Query: 1   MEISNFFIQKIIREKIILLHTQKSTPKFQNLFHLISSQRTHLSLFNIASFIFSTVFSLLS 60
           ME SNFF+QKI +EK IL  TQ STP+F  L HL+SS++ + SLF+    I S++FSLLS
Sbjct: 1   METSNFFLQKISQEKTILQQTQISTPQFLKLSHLVSSEKLYSSLFSFTFLILSSIFSLLS 60

Query: 61  VSARCLHRLACIYAARDVSLKHVISVLPKIWKRLLVTFLWLFAARFALNFAAKSVFFFVE 120
            SA  ++ +ACIYAARDVS   V++VLPK+ K+LL+TF   FA+ FA  F A  V   + 
Sbjct: 61  TSA-IVYTVACIYAARDVSFTLVMAVLPKVSKQLLITFFCYFASLFAFTFVAIGVLCLIP 120

Query: 121 SVGLSAY---EKSNF----KIIIVVFEIFHLVAIFGLMIILQLSYVVSVLEESCGFEAMV 180
            + +  Y      NF    + I   F I + + ++ L  I QLS VV+VLE+SCGF+AM 
Sbjct: 121 VIAILIYGLNTDQNFLLGIETIFFFFSISYCIGVWYLTTIWQLSSVVAVLEKSCGFKAMA 180

Query: 181 RSKALLEGKMTVAMFLFLSVILPVFVFDVVFNH-VVVRSVSIG--VVGI 220
           +SK LL+GKM + + L++ + LP+ V  +VF H  V+RS  +G  ++GI
Sbjct: 181 KSKGLLKGKMKMVIMLWVLLDLPLGVIQLVFLHYFVIRSTWVGRSILGI 228

[Close]

BLAST of Lcy12g008530 vs. ExPASy TrEMBL
Match: A0A6J1DI65 (uncharacterized protein LOC111021155 OS=Momordica charantia OX=3673 GN=LOC111021155 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 2.3e-32
Identity = 98/193 (50.78%), Postives = 129/193 (66.84%), Query Frame = 0


Query: 2   EISNFFIQKIIREKIILLHTQKSTPKFQNLFHLISSQRTHLSLFNIASFIFSTVFSLLSV 61
           EISNFFI KI  ++  L +TQKSTP+F  L HL+SS R H  L +IA FIFST FSLL+ 
Sbjct: 51  EISNFFITKITHDQQFLNNTQKSTPQFLKLSHLVSSDRIHYYLISIAYFIFSTTFSLLAT 110

Query: 62  SARCLHRLACIY-AARDVSLKHVISVLPKIWKRLLVTFLWLFAARFALNFAAKSVFFFVE 121
           SA  ++ +A IY AA D+S KHVI+ +P+ WKRLL+TFL   AA    NF A  +  F+ 
Sbjct: 111 SA-VIYAVASIYSAAPDISFKHVIAAVPRAWKRLLLTFLCFIAAILIFNFFAAFIITFLT 170

Query: 122 SVGLSAYEKSNFK------IIIVVFEIFHLVAIFGLMIILQLSYVVSVLEE-SCGFEAMV 181
            + L  YE S F       +I+ VF I ++ A++ L++I +++ VVSVLEE S GF AM 
Sbjct: 171 IIALVIYEPSEFSFGIGSAMIVAVFTILYMTALWYLVMIWKMANVVSVLEESSSGFRAMA 230

Query: 182 RSKALLEGKMTVA 187
           R+KALL+GKM VA
Sbjct: 231 RAKALLKGKMVVA 242

[Close]

BLAST of Lcy12g008530 vs. ExPASy TrEMBL
Match: A0A0A0KFW2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G398210 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 5.1e-32
Identity = 104/228 (45.61%), Postives = 145/228 (63.60%), Query Frame = 0


Query: 2   EISNFFIQKIIREKIILLHTQKSTPKFQNLFHLISSQRTHLSLFNIASFIFSTVFSLLSV 61
           E+S FF+QKI +EK IL  TQ+STP+F  L HLISSQ  + SLFN A  IFS +FSLLS 
Sbjct: 52  EVSKFFLQKISQEKTILQQTQESTPQFLKLSHLISSQNLYYSLFNFAFLIFSPIFSLLST 111

Query: 62  SARCLHRLACIYAARDVSLKHVISVLPKIWKRLLVTFLWLFAARFALNFAAKSVFFFVES 121
           SA  ++ +ACIYAARD+S   V++VLPK+WK+LL+TFL   A+ FA  F A  V   +  
Sbjct: 112 SA-TVYTVACIYAARDISFTLVMAVLPKLWKQLLITFLCYLASIFAFTFVAIGVLCLIPL 171

Query: 122 VGLSAYEKS-------NFKIIIVVFEIFHLVAIFGLMIILQLSYVVSVLEESCGFEAMVR 181
           + +  Y  +         KII   F I + + I+    I QLS VVSVLE+SCGF+A+ +
Sbjct: 172 IAILIYGLNTGQDFILGNKIIFFFFIISYCIGIWYFTTIWQLSSVVSVLEKSCGFKALEK 231

Query: 182 SKALLEGKMTVAMFLFLSVILPVFVFD-VVFNHVVVRSVSIG--VVGI 220
           SK LL+GKM + + L++ +  P+ V    + ++ V RS  +G  ++GI
Sbjct: 232 SKNLLKGKMKMVIKLWVLLDFPLGVIQFALLHYFVTRSTWVGWSILGI 278

[Close]

BLAST of Lcy12g008530 vs. ExPASy TrEMBL
Match: A0A6J1DJN3 (uncharacterized protein LOC111021150 OS=Momordica charantia OX=3673 GN=LOC111021150 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 1.5e-31
Identity = 101/223 (45.29%), Postives = 143/223 (64.13%), Query Frame = 0


Query: 3   ISNFFIQKIIREKIILLHTQKSTPKFQNLFHLISSQRTHLSLFNIASFIFSTVFSLLSVS 62
           ISNFF+QKI  ++ IL +TQKSTP+F  L  L+SS+R   +L  +A F+ S  FSLLS S
Sbjct: 58  ISNFFLQKISHDQQILNNTQKSTPEFLKLHDLVSSERIFHALSTLAFFVSSAAFSLLSTS 117

Query: 63  ARCLHRLACIYAARDVSLKHVISVLPKIWKRLLVTFLWLFAARFALNFAAKSVFFFVESV 122
           A  +  +A +YAAR VS KHV + +PK+W+RLL+TF+ + A  FA NF A SV F V  V
Sbjct: 118 A-IVFTVASVYAARAVSFKHVTAAVPKLWRRLLLTFVCVLAGIFAFNFVALSVLFLVPVV 177

Query: 123 GLSAYE------KSNFKIIIVVFEIFHLVAIFGLMIILQLSYVVSVLE-ESCGFEAMVRS 182
            +  Y        +  ++I+ +F +F+  A + LM I  LS VVS LE + CGF+AM +S
Sbjct: 178 AVVIYGPDDGSFSAGIEMILFLFIMFYCAAAWYLMSIWGLSSVVSALELDCCGFKAMAKS 237

Query: 183 KALLEGKMTVAMFLFLSVILPVFVFDVVFNHVVVRSVSIGVVG 219
           KAL+EG+M + + L   + LP+ V   VF ++VV+S + G VG
Sbjct: 238 KALVEGRMRMVLKLLALLNLPLVVVQFVFYYLVVQSATTGAVG 279

[Close]

BLAST of Lcy12g008530 vs. NCBI nr
Match: KAG6592156.1 (hypothetical protein SDJN03_14502, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 182.6 bits (462), Expect = 3.8e-42
Identity = 117/224 (52.23%), Postives = 153/224 (68.30%), Query Frame = 0


Query: 1   MEISNFFIQKIIREKIILLHTQKSTPKFQNLFHLISSQRTHLSLFNIASFIFSTVFSLLS 60
           MEISNFF+ KI  +K+IL HTQK TP+F  L  L+SS+R ++ LF +AS IFST+FSLLS
Sbjct: 1   MEISNFFLHKISHDKMILQHTQKFTPQFLKLSDLVSSERIYVVLFTLASLIFSTIFSLLS 60

Query: 61  VSARCLHRLACIYAARDVSLKHVISVLPKIWKRLLVTFLWLFAARFALNFAAKSVFFFVE 120
            SA  ++ +ACIY ARDVS   VI VLPK+W++LLVTFL +FAA  A NF A  V F + 
Sbjct: 61  TSA-VVYTVACIYTARDVSFDIVIRVLPKVWRKLLVTFLCVFAAFLAFNFVAFGVVFLIP 120

Query: 121 SVGLSAYEKSNFKI------IIVVFEIFHLVAIFGLMIILQLSYVVSVLEESCGFEAMVR 180
            + +  Y  ++         I   F IF+L AI+ L II QLS VVSVLE SCGF+AM +
Sbjct: 121 VIAIIIYGPNDHHFLAGIGTIFFFFTIFYLAAIWYLTIIWQLSSVVSVLEASCGFKAMAK 180

Query: 181 SKALLEGKMTVAMFLFLSVILPVFVFDVVFNHVVVRSVSIGVVG 219
           SK LL+GKM + + L + + LP+ V  +VF ++VVRS S+GV G
Sbjct: 181 SKGLLKGKMKMVVKLTMLLNLPLGVAQLVFYYLVVRSASVGVAG 223

[Close]

BLAST of Lcy12g008530 vs. NCBI nr
Match: KAG7025019.1 (hypothetical protein SDJN02_13841, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 181.0 bits (458), Expect = 1.1e-41
Identity = 117/224 (52.23%), Postives = 152/224 (67.86%), Query Frame = 0


Query: 1   MEISNFFIQKIIREKIILLHTQKSTPKFQNLFHLISSQRTHLSLFNIASFIFSTVFSLLS 60
           MEISNFF+ KI  +K+IL HTQK TP+F  L  L+SS+R ++ LF +AS IFST+FSLLS
Sbjct: 51  MEISNFFLHKISHDKMILQHTQKFTPQFLKLSDLVSSERIYVVLFTLASLIFSTIFSLLS 110

Query: 61  VSARCLHRLACIYAARDVSLKHVISVLPKIWKRLLVTFLWLFAARFALNFAAKSVFFFVE 120
            SA  ++ +ACIY ARDVS   VI VLPK+W++LLVTFL +FAA  A NF A  V F + 
Sbjct: 111 TSA-VVYTVACIYTARDVSFDIVIRVLPKVWRKLLVTFLCVFAAFLAFNFVAFGVVFLIP 170

Query: 121 SVGLSAYEKSNFKI------IIVVFEIFHLVAIFGLMIILQLSYVVSVLEESCGFEAMVR 180
            + +  Y  ++         I   F IF+L AI+ L II QLS VVSVLE SCGF+AM +
Sbjct: 171 VIAIIIYGPNDHHFLAGIGTIFFFFTIFYLAAIWYLTIIWQLSSVVSVLEASCGFKAMAK 230

Query: 181 SKALLEGKMTVAMFLFLSVILPVFVFDVVFNHVVVRSVSIGVVG 219
            K LL+GKM + + L + + LP+ V  +VF ++VVRS SIGV G
Sbjct: 231 CKGLLKGKMKMVVKLTMLLNLPLGVAQLVFYYLVVRSASIGVAG 273

[Close]

BLAST of Lcy12g008530 vs. NCBI nr
Match: XP_022936200.1 (uncharacterized protein LOC111442875 [Cucurbita moschata])

HSP 1 Score: 162.2 bits (409), Expect = 5.4e-36
Identity = 106/207 (51.21%), Postives = 140/207 (67.63%), Query Frame = 0


Query: 16  IILLHTQKSTPKFQNLFHLISSQRTHLSLFNIASFIFSTVFSLLSVSARCLHRLACIYAA 75
           +IL HTQK TP+F  L  L+SS+R ++ LF +AS IFST+FSLLS SA  ++ +ACIY A
Sbjct: 1   MILQHTQKFTPQFLKLSDLVSSERIYVVLFTLASLIFSTIFSLLSTSA-VVYTVACIYTA 60

Query: 76  RDVSLKHVISVLPKIWKRLLVTFLWLFAARFALNFAAKSVFFFVESVGLSAYEKSNFKI- 135
           RDVS   VI VLPK+W++LLVTFL +FAA  A NF A  V F +  + +  Y  ++    
Sbjct: 61  RDVSFDTVIRVLPKVWRKLLVTFLCVFAAFLAFNFVAFGVMFLIPVIAIIIYGPNDHHFL 120

Query: 136 -----IIVVFEIFHLVAIFGLMIILQLSYVVSVLEESCGFEAMVRSKALLEGKMTVAMFL 195
                I   F IF+L AI+ L II QLS VVSVLE SCGF+AM +SK LL+GKM + + L
Sbjct: 121 AGIGTIFFFFTIFYLAAIWYLTIIWQLSSVVSVLEASCGFKAMAKSKGLLKGKMKMVVKL 180

Query: 196 FLSVILPVFVFDVVFNHVVVRSVSIGV 217
            + + LP+ V  +VF ++VVRS S+GV
Sbjct: 181 TMLLNLPLGVAQLVFYYLVVRSASVGV 206

[Close]

BLAST of Lcy12g008530 vs. NCBI nr
Match: XP_023536183.1 (uncharacterized protein LOC111797428 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 159.8 bits (403), Expect = 2.7e-35
Identity = 105/209 (50.24%), Postives = 138/209 (66.03%), Query Frame = 0


Query: 16  IILLHTQKSTPKFQNLFHLISSQRTHLSLFNIASFIFSTVFSLLSVSARCLHRLACIYAA 75
           +IL HTQK TP+F  L  L+SS+R ++ LF + S IFST+FSLLS SA  ++ +ACIY A
Sbjct: 1   MILQHTQKFTPQFLKLSDLVSSERIYVVLFTLTSLIFSTIFSLLSTSA-VVYTVACIYTA 60

Query: 76  RDVSLKHVISVLPKIWKRLLVTFLWLFAARFALNFAAKSVFFFVESVGLSAYEKSNFKI- 135
           RDVS   VI VLPK+W++LLVTFL +FAA  A NF A  V F +  + +  Y  ++    
Sbjct: 61  RDVSFDIVIRVLPKVWRKLLVTFLCVFAAFLAFNFVAFGVMFLIPVIAIIIYGPNDHHFL 120

Query: 136 -----IIVVFEIFHLVAIFGLMIILQLSYVVSVLEESCGFEAMVRSKALLEGKMTVAMFL 195
                I   F IF+L AI+ L II QLS VVSVLE SCGF+AM +SK LL+GKM + + L
Sbjct: 121 AGIGTIFFFFTIFYLAAIWYLTIIWQLSSVVSVLEASCGFKAMAKSKGLLKGKMKMVVKL 180

Query: 196 FLSVILPVFVFDVVFNHVVVRSVSIGVVG 219
            + + LP+ V  +VF + VVRS S+G  G
Sbjct: 181 TMLLNLPLGVAQLVFYYFVVRSASVGAAG 208

[Close]

BLAST of Lcy12g008530 vs. NCBI nr
Match: KAA0059845.1 (putative transmembrane protein [Cucumis melo var. makuwa] >TYK24799.1 putative transmembrane protein [Cucumis melo var. makuwa])

HSP 1 Score: 150.2 bits (378), Expect = 2.1e-32
Identity = 105/229 (45.85%), Postives = 148/229 (64.63%), Query Frame = 0


Query: 1   MEISNFFIQKIIREKIILLHTQKSTPKFQNLFHLISSQRTHLSLFNIASFIFSTVFSLLS 60
           ME SNFF+QKI +EK IL  TQ STP+F  L HL+SS++ + SLF+    I S++FSLLS
Sbjct: 1   METSNFFLQKISQEKTILQQTQISTPQFLKLSHLVSSEKLYSSLFSFTFLILSSIFSLLS 60

Query: 61  VSARCLHRLACIYAARDVSLKHVISVLPKIWKRLLVTFLWLFAARFALNFAAKSVFFFVE 120
            SA  ++ +ACIYAARDVS   V++VLPK+ K+LL+TF   FA+ FA  F A  V   + 
Sbjct: 61  TSA-IVYTVACIYAARDVSFTLVMAVLPKVSKQLLITFFCYFASLFAFTFVAIGVLCLIP 120

Query: 121 SVGLSAY---EKSNF----KIIIVVFEIFHLVAIFGLMIILQLSYVVSVLEESCGFEAMV 180
            + +  Y      NF    + I   F I + + ++ L  I QLS VV+VLE+SCGF+AM 
Sbjct: 121 VIAILIYGLNTDQNFLLGIETIFFFFSISYCIGVWYLTTIWQLSSVVAVLEKSCGFKAMA 180

Query: 181 RSKALLEGKMTVAMFLFLSVILPVFVFDVVFNH-VVVRSVSIG--VVGI 220
           +SK LL+GKM + + L++ + LP+ V  +VF H  V+RS  +G  ++GI
Sbjct: 181 KSKGLLKGKMKMVIMLWVLLDLPLGVIQLVFLHYFVIRSTWVGRSILGI 228

[Close]

BLAST of Lcy12g008530 vs. TAIR 10
Match: AT1G31130.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19950.1); Has 246 Blast hits to 244 proteins in 29 species: Archae - 2; Bacteria - 16; Metazoa - 0; Fungi - 0; Plants - 222; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). )

HSP 1 Score: 60.1 bits (144), Expect = 2.7e-09
Identity = 61/174 (35.06%), Postives = 90/174 (51.72%), Query Frame = 0


Query: 40  THLSLFNIASFIFSTVFSLLSVSARCLHRLACIYAARDVSLKHVISVLPKIWKRLLVTFL 99
           T L +F  +  IF   FSLLS +A  +  +A +Y  + VS    +S +PK++KRL +TFL
Sbjct: 76  TVLLIFQFSYLIFLFAFSLLSTAA-VVFTVASLYTGKPVSFSSTLSAIPKVFKRLFITFL 135

Query: 100 WLFAARFALNFAAKSVFFFVESVGLSAYEKSNFKIIIVVFEIFHLVAIFGLMI----ILQ 159
           W+    FA N    +VFF    + L A + ++  + IV   I   V  FG+ +    +  
Sbjct: 136 WVALLMFAYN----AVFFVFLVMLLVALDLNSLGLAIVAGVIIS-VLYFGVHVYFTALWH 195

Query: 160 LSYVVSVLEESCGFEAMVRSKALLEGKMTVAMFLFLSVILPVFVFDVVFNHVVV 210
           L  V+SVLE   G  AM ++  LL+GK  +AM L    +    +  VVF  VVV
Sbjct: 196 LGSVISVLEPVYGIAAMRKAYELLKGKTKMAMGLIFVYLFLCGLIGVVFGAVVV 243

[Close]

BLAST of Lcy12g008530 vs. TAIR 10
Match: AT4G19950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44860.1); Has 338 Blast hits to 330 proteins in 72 species: Archae - 2; Bacteria - 94; Metazoa - 7; Fungi - 0; Plants - 232; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 55.5 bits (132), Expect = 6.6e-08
Identity = 60/179 (33.52%), Postives = 85/179 (47.49%), Query Frame = 0


Query: 40  THLSLFNIASFIFSTVFSLLSVSARCLHRLACIYAARDVSLKHVISVLPKIWKRLLVTFL 99
           T L +F     IF   FSLLS +A  +  +A +Y  + VS    +S +P + KRL +TFL
Sbjct: 76  TVLLVFQFCYIIFLFAFSLLSTAA-VVFTVASLYTGKPVSFSSTMSAIPLVLKRLFITFL 135

Query: 100 WLFAARFALNFAAKSVFFFVESVGLSAYEKSNFKIIIVVFEIFHLVAIFGLMIIL----- 159
           W+     A N    +VF       + A +  N     VV  +F LV IF L +++     
Sbjct: 136 WVSLLMLAYN----TVFLIFLVTLIVAVDLQN-----VVLAVFSLVVIFVLFLVVHVYMT 195

Query: 160 ---QLSYVVSVLEESCGFEAMVRSKALLEGKMTVAMFLFLSVILPVFVFDVVFNHVVVR 211
               L+ VVSVLE   G  AM +S  LL+GK  +A  +    ++       VF  VVVR
Sbjct: 196 ALWHLASVVSVLEPIYGLAAMKKSYELLKGKTLMACSMVFIYLVHCGFIAGVFGAVVVR 244

[Close]

BLAST of Lcy12g008530 vs. TAIR 10
Match: AT5G44860.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19950.1); Has 233 Blast hits to 227 proteins in 25 species: Archae - 0; Bacteria - 13; Metazoa - 1; Fungi - 0; Plants - 216; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 4.0e-05
Identity = 63/206 (30.58%), Postives = 96/206 (46.60%), Query Frame = 0


Query: 40  THLSLFNIASFIFSTVFSLLSVSARCLHRLACIYAARDVSLKHVISVLPKIWKRLLVTFL 99
           T L ++     IF   FSLLS +A  +  +A +Y  + VS    +S +P + KRL +TFL
Sbjct: 76  TLLLIYQFIYVIFLFAFSLLSTAA-VVFTVASLYTGKPVSFSSTMSAIPLVLKRLFITFL 135

Query: 100 WLFAARFALNFAAKSVFFFVESVGLSAYEKSNFKIIIVVFEIFHLVAIFGLMIIL----- 159
           W+       N    SVF     V + A +  +     V+  +F +V IF L + +     
Sbjct: 136 WVSLMMLVYN----SVFLLFLVVLIVAIDLQS-----VILAVFSMVVIFVLFLGVHVYMT 195

Query: 160 ---QLSYVVSVLEESCGFEAMVRSKALLEGKMTVA---MFLFLS---VILPVFVFDVV-- 219
               L+ VVSVLE   G  AM +S  LL G+  +A   +F++L+   +   VF   VV  
Sbjct: 196 AWWHLASVVSVLEPIYGIAAMKKSYELLNGRTNMACSMVFMYLALCGITAGVFGGVVVHG 255

Query: 220 ------FNHVVVRSVSIGVVGITNFV 224
                 F  +VV    +G++ I N V
Sbjct: 256 GDDFGLFTKIVVGGFLVGILVIVNLV 271

[Close]

BLAST of Lcy12g008530 vs. TAIR 10
Match: AT1G69430.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G26650.1); Has 216 Blast hits to 215 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 216; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 42.0 bits (97), Expect = 7.6e-04
Identity = 47/178 (26.40%), Postives = 93/178 (52.25%), Query Frame = 0


Query: 47  IASFIFSTVFSLLSVSARC--LHRLACIYAARDVSLKHVISVLPKIWKRLLVTFLWLFA- 106
           ++S +   +F  LS+ +R   ++ + C Y+ + V +   + ++ ++WKRL++T+LW+   
Sbjct: 121 VSSAMCFPLFITLSLLSRAAVVYSVDCTYSRKKVVVTKFVVIMQRLWKRLVITYLWICTV 180

Query: 107 -----ARFALNFAAKSVFFFVESVGLSAYEKSNFKIII-VVFEIFHLVAIFGLMIILQLS 166
                  F +   A    F+V  +G S    +   I++ +VF +    AI    II   +
Sbjct: 181 IVVCLTSFCVFLVAVCSSFYV--LGFSPDFNAYGAILVGLVFSVVFANAI----IICNTT 240

Query: 167 YVVSVLEESCGFEAMVRSKALLEGKMTVAMFLFLSVILPVFVFDVVFNHVVVRSVSIG 216
            V+S+LE+  G  A+VR+  L++G+  V + +FL   + +   + +F H  V+S+S G
Sbjct: 241 IVISILEDVSGPGALVRASDLIKGQTQVGLLIFLGSTIGLTFVEGLFEH-RVKSLSYG 291

[Close]

BLAST of Lcy12g008530 vs. TAIR 10
Match: AT1G26650.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G69430.1); Has 205 Blast hits to 204 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 205; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 41.6 bits (96), Expect = 9.9e-04
Identity = 48/171 (28.07%), Postives = 87/171 (50.88%), Query Frame = 0


Query: 51  IFSTVFSLLSVSARCLHRLACIYAARDVSLKHVISVLPKIWKRLLVTFLWLFAARFALNF 110
           +F TV SLLS  A  ++ + C Y+   V +   + +L KIW+R++ T++W+      +  
Sbjct: 113 VFITV-SLLS-KAAVVYSVDCSYSREVVDISKFLVILQKIWRRVVFTYVWI-----CILI 172

Query: 111 AAKSVFFFVESVGL-SAYEKSNFKIIIVVFEIFHLVAIFGL-----MIILQLSYVVSVLE 170
                FF V  V + S++    F     V+    +   F +     +II   + V+SVLE
Sbjct: 173 VGCFTFFCVLLVAICSSFSVLGFSPDFNVYGAMLVGLAFSVVFANAIIICNTAIVISVLE 232

Query: 171 ESCGFEAMVRSKALLEGKMTVAMFLFLSVILPVFVFDVVFNHVVVRSVSIG 216
           +  G  A++R+  L++G++ V + +FL   L +   + +F+H  V+ VS G
Sbjct: 233 DVSGLGALMRASDLIKGQIQVGLLMFLGSTLGLAFVEGLFDH-RVKKVSYG 275

The following BLAST results are available for this feature:

BLAST of Lcy12g008530 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy12g008530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FCY9	2.6e-36	51.21	uncharacterized protein LOC111442875 OS=Cucurbita moschata OX=3662 GN=LOC1114428...	[more]
A0A5A7V1U2	1.0e-32	45.85	Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A6J1DI65	2.3e-32	50.78	uncharacterized protein LOC111021155 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]
A0A0A0KFW2	5.1e-32	45.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G398210 PE=4 SV=1	[more]
A0A6J1DJN3	1.5e-31	45.29	uncharacterized protein LOC111021150 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]

BLAST of Lcy12g008530 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6592156.1	3.8e-42	52.23	hypothetical protein SDJN03_14502, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7025019.1	1.1e-41	52.23	hypothetical protein SDJN02_13841, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022936200.1	5.4e-36	51.21	uncharacterized protein LOC111442875 [Cucurbita moschata]	[more]
XP_023536183.1	2.7e-35	50.24	uncharacterized protein LOC111797428 [Cucurbita pepo subsp. pepo]	[more]
KAA0059845.1	2.1e-32	45.85	putative transmembrane protein [Cucumis melo var. makuwa] >TYK24799.1 putative t...	[more]

BLAST of Lcy12g008530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31130.1	2.7e-09	35.06	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G19950.1	6.6e-08	33.52	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G44860.1	4.0e-05	30.58	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G69430.1	7.6e-04	26.40	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G26650.1	9.9e-04	28.07	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33133:SF51	PROTEIN, PUTATIVE-RELATED	coord: 1..224
None	No IPR available	PANTHER	PTHR33133	OS08G0107100 PROTEIN-RELATED	coord: 1..224

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy12g008530.1	Lcy12g008530.1	mRNA